mRNA_E_fasciculatus_S2_contig76.15767.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig76.15767.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQU4_ECTSI) HSP 1 Score: 1310 bits (3390), Expect = 0.000e+0 Identity = 727/811 (89.64%), Postives = 748/811 (92.23%), Query Frame = 1
Query: 115 MPADLAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGNKLGLLDEQNLKFATSQVLRKGPRAGNQRPRRPPTTATGTSSAWGFGTQGETDEAPRRVIDYQPKRTRKRTSPNPEACHSARVGIGVGNSHRTGGRPSAPAEFGEDDGVETARLCSELLRWSSALEGAERQLGGKGGPAGMESRTGGDIARARHLAKAAPADDAKEE---QNTPARHADDDDGFDSDQDQDQGDATLHDRPASMRVEERQDDRSDARRSRRQRDEGEGEVSGPRDRHRSRSPEVGDDVVEGWEESEGEPAYSPSRRHGGRVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHALYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLREDARIREEEFSRLKKKLAAIPSSVAGGKCSCCASTHHGRLRAVGDNGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKAISLEAELESTRKSLSEARQEIAESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLRKEKVRVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRSQSQSRSPTRRRAEGQDSRHDPPPTASRPAARQRSLTREDFRARNDGGRRRRLGVQDASFHSTSDSEPSVRCRSLSPPPNPGSGEGRVEGARGRWLPPRDGRRVPCVQDRVGGSPGGWGGTGRGLSTRSXXXXXXXXXPPGDAAGLRGSSTLSGGSANGTMKARYERLQAMYRRVNRREADTRGRAGV 2538
MPADLAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEG+KLGLLDEQNLKFATSQVLRKGPRAGNQRPRRPPTTATGTSSAWGFGTQGETDEA RR +D Q +RTRKRTSPNPE SARVGIG GN+HRTGGRPSAP FGEDDGVETARL SELLRWSSALEGAE+QLGG GGPAGMES TGG IARARH+AKAAPA+DAKEE Q+TP+R DDD+ FDSDQ+ DAT HDRPAS RVEER++DRSD RRSRRQRDEGEGEVSG RDRHRS SPEV DDVVE WEESEGEPA S SRR GGRVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHA+YAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLR+DARIREEEFSRLKKKLAA PSSVAGGKCSCCASTHHGR +A G+NGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKA+SLEAELESTR SLSEARQEI ESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLR+EK RVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRS SQSRSP+RRRAEGQDSR DPPPTASRPAARQRSLTREDFRARNDG RRR LGVQDASF S SDSEPSVRCRSLSPPPNPG GEGR EGA GRWLPPRD RRVPCVQ RVGGSPGGWGGTGRGLSTRS PPGDAA LRGSSTLSGGSANGTMKARYERLQAMYRRVNRREA RGR+GV
Sbjct: 1 MPADLAWDDGGEYARAAEAAGVDVGGMLEAGVDAKHLLEFVSNYRKEEGDKLGLLDEQNLKFATSQVLRKGPRAGNQRPRRPPTTATGTSSAWGFGTQGETDEASRRAVDCQSRRTRKRTSPNPEVRQSARVGIGNGNTHRTGGRPSAPVAFGEDDGVETARLRSELLRWSSALEGAEKQLGGNGGPAGMESWTGGGIARARHVAKAAPAEDAKEEGSEQSTPSRQVDDDESFDSDQE----DATHHDRPASTRVEERRNDRSDTRRSRRQRDEGEGEVSGDRDRHRSHSPEVVDDVVEVWEESEGEPACSSSRRPGGRVRGSISTYGHARPTPSYALPTKHFKTPDRDRRHAVYAEDARGQKQMQRQAHLEEENAALKLRLEGLRRAIHELEHQANTLRDDARIREEEFSRLKKKLAATPSSVAGGKCSCCASTHHGRQKAAGENGPSALKKRALAAEGRTETLERCLRESKAKEQRSREIVASLKHSYSAAQAKAVSLEAELESTRNSLSEARQEIVESRRGAKGRLKETRKQRRQQGEKEREAETARAQAADLAGKLRKASREIERARLEAVKLREEKARVEGESQDLARENRMLQDRLSDGKLRSRTRERDRWILAELRSHSQSRSPSRRRAEGQDSRRDPPPTASRPAARQRSLTREDFRARNDGVRRRHLGVQDASFDSASDSEPSVRCRSLSPPPNPGLGEGRAEGAGGRWLPPRDSRRVPCVQGRVGGSPGGWGGTGRGLSTRSADGAEG---PPGDAAVLRGSSTLSGGSANGTMKARYERLQAMYRRVNRREAGARGRSGV 804 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig76.15767.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig76.15767.1 >prot_E_fasciculatus_S2_contig76.15767.1 ID=prot_E_fasciculatus_S2_contig76.15767.1|Name=mRNA_E_fasciculatus_S2_contig76.15767.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=848bp MTFSEEGEEDSFIVELLNATERHGDGKLQRFDSNRGSAMPADLAWDDGGEback to top mRNA from alignment at E_fasciculatus_S2_contig76:32329..40643+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig76.15767.1 ID=mRNA_E_fasciculatus_S2_contig76.15767.1|Name=mRNA_E_fasciculatus_S2_contig76.15767.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8315bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig76:32329..40643+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig76:32329..40643+ >mRNA_E_fasciculatus_S2_contig76.15767.1 ID=mRNA_E_fasciculatus_S2_contig76.15767.1|Name=mRNA_E_fasciculatus_S2_contig76.15767.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2544bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig76:32329..40643+ (Ectocarpus fasciculatus EfasUO2)back to top |