mRNA_E_fasciculatus_S2_contig759.15750.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ2_ECTSI) HSP 1 Score: 320 bits (820), Expect = 2.200e-110 Identity = 162/170 (95.29%), Postives = 166/170 (97.65%), Query Frame = 1
Query: 1 MLRTAVQAGVGCLPRRAASGGGGAVSSAQAGRRALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSKDLDGITVFIPDGPPVG 510
MLRTA+Q GVGCLPRRAASGG AVSSAQAGRRALSSLQEALVKVTF+DAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKA AVQSRNSESWTEDLFGQGPVCASCHVMLTKEFT+KIEPPLDSEISLLERKGELYAPGSSRLGCQIKLS+DLDGITVFIPDGPPVG
Sbjct: 1 MLRTALQTGVGCLPRRAASGG--AVSSAQAGRRALSSLQEALVKVTFVDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKAGAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTEKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSRDLDGITVFIPDGPPVG 168
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRA1_9STRA) HSP 1 Score: 138 bits (348), Expect = 1.210e-38 Identity = 67/138 (48.55%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 97 RALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERKGE-LYAPGSSRLGCQIKLSKDLDGITVFIPDGPPV 507
RA+S++ + V +TF+D EG R+TV L GQ+I+EVA+ H+IALDG C G R ++ + ED +G GP C +CHVM+ E+ K+ + E L+ G+ LY PG+SRLGCQ++LSK LDG+ V+IPDGPPV
Sbjct: 17 RAMSTVADKSVTITFVDLEGVRKTVPGLVGQSIYEVAKLHDIALDGACGGGGMPKYIRRTDVFLEDEYGAGPQCNTCHVMIPDEWYGKLNEVFECEQEQLDDIGDNLYVPGASRLGCQVRLSKALDGMVVYIPDGPPV 154
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: 2Fe-2S (ferredoxin-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CXE6_9STRA) HSP 1 Score: 132 bits (333), Expect = 3.880e-36 Identity = 67/150 (44.67%), Postives = 94/150 (62.67%), Query Frame = 1
Query: 64 GGAVSSAQAGRRALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKI---EPPLDSEISLLERKGELYAPGSSRLGCQIKLSKDLDGITVFIPDGPP 504
G +S + RR L+S+++ V VTFI+ EG R TV GQ++ +VA+ H+I L+ C G Q ++SE WTEDLFG+GP C CHV + + + I +P + E LLE + A +SRLGCQ+ L+K+LDG+ VFIPDGPP
Sbjct: 30 GAVISIIGSSRRTLASVKDVTVNVTFINHEGLRITVPGRVGQSLLDVAQMHDIELESGCGGGGAVQQKKHSERWTEDLFGRGPCCHFCHVKIPSPWINTIHDKQPATEKEHELLEEHWQEEATDNSRLGCQVMLTKNLDGMQVFIPDGPP 179
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0K6_9STRA) HSP 1 Score: 116 bits (290), Expect = 6.870e-30 Identity = 58/141 (41.13%), Postives = 84/141 (59.57%), Query Frame = 1
Query: 94 RRALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEP-PLDSEISLLERKGELY--APGSSRLGCQIKLSKDLDGITVFIPDGPPV 507
+ +LS++ + V VTF+ +G R TV L GQ + +VA H++ LDGPC G V++ +E WTE +G+GP C C V++ E+ + I+ PL E ++ G SRL C IKL+K+LDGITV +PD PPV
Sbjct: 21 KASLSTVAQKTVHVTFVAHDGSRSTVPGLEGQTVMDVARMHKLDLDGPCNGGGHEVETYRNERWTEPQYGEGPQCGHCRVLVPDEWGNAIDSRPLYEEKAMNRLWGNAREGVGRQSRLACMIKLTKELDGITVVVPDAPPV 161
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CG69_9STRA) HSP 1 Score: 100 bits (248), Expect = 1.810e-23 Identity = 55/133 (41.35%), Postives = 78/133 (58.65%), Query Frame = 1
Query: 109 SLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERK-GELYAPGSSRLGCQIKLSKDLDGITVFIPDGPP 504
S+++ V+V F+ EG+R TV L G +I EVA H I + G A V +S++WTEDLFG+GP H+M++ KI P L +E+ LL E +SRL C + LSKD+DG+TV++PD P
Sbjct: 40 SVEDITVQVNFMTEEGNRTTVPGLEGMSIHEVATMHNIDIGHQLCGSA--VNKIHSDTWTEDLFGEGPQLGFDHIMISPADQAKIPPRLPTELELLRGVWDEDEISDNSRLSCMVVLSKDMDGMTVYVPDRVP 170
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Hypothetical (protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G1V7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.200e-22 Identity = 63/174 (36.21%), Postives = 90/174 (51.72%), Query Frame = 1
Query: 4 LRTAVQAGVGCLPRRAASG--GGGAVSSAQAGRR------ALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIA-LDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLER-KGELYAPGSSRLGCQIKLSKDLDGITVFIPD 495
+R +V A PR AS GG +S+A G A S +E V+V F++ G+R V+ GQ++ E A + A LD C G R++++WTED +G+G CA CHV+L + PL EI LE + +SRLGCQ+ LSK +DG+ V +PD
Sbjct: 1 VRASVAAAAAAAPRPIASAAAGGARMSTAATGIDVTLPGVAQHSTEETTVRVVFVNYAGERTVVAGRVGQSLTEAASDADYAYLDAACGGGGGRHSVRHNDAWTEDQYGEGAFCAHCHVVLPLDRAAAAPAPLADEIQRLEEYPDQSSVTRTSRLGCQVTLSKAMDGMVVHVPD 174
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4DBU9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.060e-22 Identity = 62/143 (43.36%), Postives = 85/143 (59.44%), Query Frame = 1
Query: 88 AGRRALSSLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSRN---SESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERKGELYAPG-SSRLGCQIKLSKDLDGITVFIPDGPP 504
AGRR LS + E V+VTF++ EG R+TV+ GQN+ +VA H++ + G A A R S+ WTE LFG+ V A HV L E+ K+ E++++E+ E SSRL +I+L+KDLDGITVFIPD P
Sbjct: 50 AGRRGLSWVAEETVRVTFVNVEGLRQTVNGRVGQNLHDVARMHDVDV-----GLAAAGSPRERVRSDVWTEQLFGEDCVDAHDHVYLPPEWLAKVPERRPYELAIIEQYWESEEISESSRLAHKIQLTKDLDGITVFIPDQLP 187
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P9R0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-19 Identity = 53/135 (39.26%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 109 SLQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKHEIALDGPCRGKADAVQSR-NSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLER--KGELYAPGSSRLGCQIKLSKDLDGITVFIPDGPP 504
S+ + VK+ F+D EG R+TV GQ I +VA H I + GPC V SR NS++WTEDL+G+G HV+L + D SE+ +L E +P +SRL + ++KD++G+TVF+PD P
Sbjct: 38 SVADVTVKLNFVDYEGKRQTVPGRIGQTIHDVATMHGIEV-GPC--SVGGVVSRVNSDTWTEDLYGEGATSGYDHVLLVGKGADSANVKCVSEVEMLNEYWDSEDISP-NSRLASMVVVNKDMEGMTVFVPDALP 168
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BY38_SAPPC) HSP 1 Score: 88.2 bits (217), Expect = 1.020e-18 Identity = 47/134 (35.07%), Postives = 72/134 (53.73%), Query Frame = 1
Query: 112 LQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKH--EIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSKDLDGITVFIPDGPPV 507
+++ LV VT +D EG R + GQ +FE + +I D G + + +TE LFG+GP HV+++ E+ K+ P + E +LE E +SRLG +I L+KDLDG+ V +P+ PPV
Sbjct: 27 VRDHLVAVTLLDYEGSRHIIQGRVGQTLFEACQLSGLDIVKDDSLGGGGATYSAVRTPEFTESLFGEGPSSPLSHVVVSNEWVHKLPVPSEREARILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPV 160
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7C6_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.140e-18 Identity = 48/134 (35.82%), Postives = 73/134 (54.48%), Query Frame = 1
Query: 112 LQEALVKVTFIDAEGDRETVSALPGQNIFEVAEKH--EIALDGPCRGKADAVQSRNSESWTEDLFGQGPVCASCHVMLTKEFTDKIEPPLDSEISLLERKGELYAPGSSRLGCQIKLSKDLDGITVFIPDGPPV 507
+ + LV VT +D EG R V GQ +F+ + +I D G + + +TE LFG+GP HV+++ E+ +K+ P D E+ +LE E +SRLG +I L+KDLDG+ V +P+ PPV
Sbjct: 27 VHDRLVSVTLLDWEGSRHIVQGRVGQTLFDACQLSGVDIVKDDSLGGGGATYSAIRTPEFTESLFGEGPASPLSHVVVSNEWFNKLPPASDRELRILEDVPEEDLTKNSRLGTEIILTKDLDGLVVAVPEAPPV 160 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig759.15750.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig759.15750.1 >prot_E_fasciculatus_S2_contig759.15750.1 ID=prot_E_fasciculatus_S2_contig759.15750.1|Name=mRNA_E_fasciculatus_S2_contig759.15750.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=171bp MLRTAVQAGVGCLPRRAASGGGGAVSSAQAGRRALSSLQEALVKVTFIDAback to top mRNA from alignment at E_fasciculatus_S2_contig759:18508..22111- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig759.15750.1 ID=mRNA_E_fasciculatus_S2_contig759.15750.1|Name=mRNA_E_fasciculatus_S2_contig759.15750.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3604bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig759:18508..22111- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig759:18508..22111- >mRNA_E_fasciculatus_S2_contig759.15750.1 ID=mRNA_E_fasciculatus_S2_contig759.15750.1|Name=mRNA_E_fasciculatus_S2_contig759.15750.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=513bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig759:18508..22111- (Ectocarpus fasciculatus EfasUO2)back to top |