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Homology
BLAST of mRNA_E_fasciculatus_S2_contig7504.15670.1 vs.
Match: Morn (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L7_ECTSI) HSP 1 Score: 502 bits (1292), Expect = 1.100e-173 Identity = 374/410 (91.22%), Postives = 387/410 (94.39%), Query Frame = 3
Query: 75 REAIFFGFLLQAFTTDLTAVHSPSCNSCVPLALNLREKLSVRSRVPMSSGKLIRKKQRNFEDGTRYDGGWERGLFHGQGTLTWANGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIKGRTLTGVWDQGVPDFNPPVDGYKRFVFPDGKGVYDGHWRGCKRHGQGSFAFSNGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNTKQCXXXXXXXXXXXXXXRHYFHSSSPGDDSDPEMATVGDYYXXXXXXXXXXXXGVYVDAGGERHAGLWVDGICPEVDFSHVPEGSGSFRYSFSGGTYEGEWLNRAPHGQGRMEYSDGTVYVGGWQDFKFHGYGKLVQRGVVXXXXXXXXXXXXSGSAGASPDIDDARVDVAGEQEVAMGK 1304
R++ FGF L+AFTTDLTAVH P C SC PLALN EKL VRSRVPMS GKL+RKKQRNFEDGTRYDGGWERGLFHGQGTLTWANGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LEIKGRTLTGVW+QGVPDFNPPVDGYKRFVFPDGKGVYDGHWRG KRHGQGSFAFSNGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWP+T+QCXXXXXXXXXXXXXX H FHSSS GDD DPE T GDYYXXXXXXXXXXXXGV+VDAGGERHAGLWVDGICPEVDFSHVPEGSG+FRYSFSGGTYEGEWLNRAPHGQGRMEYSDGTVYVGGWQDFKFHGYGKLVQRGVVXXXXXXXXXXXXSGSAGA P+I+DARVDV GEQE+A+ K
Sbjct: 25 RKSDLFGFPLEAFTTDLTAVHRPLCISCTPLALNPPEKLPVRSRVPMS-GKLVRKKQRNFEDGTRYDGGWERGLFHGQGTLTWANGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLEIKGRTLTGVWNQGVPDFNPPVDGYKRFVFPDGKGVYDGHWRGYKRHGQGSFAFSNGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPSTRQCXXXXXXXXXXXXXXXHDFHSSSAGDDCDPETKTGGDYYXXXXXXXXXXXXGVFVDAGGERHAGLWVDGICPEVDFSHVPEGSGNFRYSFSGGTYEGEWLNRAPHGQGRMEYSDGTVYVGGWQDFKFHGYGKLVQRGVVXXXXXXXXXXXXSGSAGAVPEINDARVDVVGEQELAVEK 433
BLAST of mRNA_E_fasciculatus_S2_contig7504.15670.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZS7_9STRA) HSP 1 Score: 207 bits (526), Expect = 1.460e-59 Identity = 196/289 (67.82%), Postives = 218/289 (75.43%), Query Frame = 3
Query: 252 FEDGTRYDGGWERGLFHGQGTLTWANGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIKGRTLTGVWDQGVPDFNPPVDGYKRFVFPDGKGVYDGHWRGCKRHGQGSFAFSNGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNTKQCXXXXXXXXXXXXXXRHYFHSSSPGDDSDPEMATVGDYYXXXXXXXXXXXXGVYVDAGGERHAGLWVDGICPEVDFSHVPEGSGSFRYSFSGGTYEGEWLNRAPHGQGRMEYSDGT 1118
++DGT Y+G W G HG+GT+TW N C XXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXL I G+TL G W GVPDF PP DGYKRFVFPDGKG+Y+G+W+ KRHGQG+F F N D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +W + +QC XXXXXXXXXXXX HYF+S G +YYXXXXXXXX G YVDA G H G W G+CPE+DF+ +PE SG FRY F GGTYEG+W NR PHG+GRM YSDGT
Sbjct: 19 YQDGTVYEGQWRNGKHHGKGTITWPNSCSXXXXXXXXXXXXXXXCTFPGGEXXXXXXXXXXXXXXXXLHIAGKTLQGSWTNGVPDFAPPRDGYKRFVFPDGKGIYEGYWKDRKRHGQGTFIFENNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYTWASIRQCYVXXXXXXXXXXXXXHYFNSEVAG--------ATSEYYXXXXXXXXMWGEGKYVDADGSVHVGTWEKGVCPEIDFNAIPE-SGQFRYQFQGGTYEGQWRNRMPHGRGRMVYSDGT 298
BLAST of mRNA_E_fasciculatus_S2_contig7504.15670.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9EAG9_HETAK) HSP 1 Score: 201 bits (512), Expect = 1.630e-57 Identity = 197/289 (68.17%), Postives = 221/289 (76.47%), Query Frame = 3
Query: 252 FEDGTRYDGGWERGLFHGQGTLTWANGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEIKGRTLTGVWDQGVPDFNPPVDGYKRFVFPDGKGVYDGHWRGCKRHGQGSFAFSNGDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSWPNTKQCXXXXXXXXXXXXXXRHYFHSSSPGDDSDPEMATVGDYYXXXXXXXXXXXXGVYVDAGGERHAGLWVDGICPEVDFSHVPEGSGSFRYSFSGGTYEGEWLNRAPHGQGRMEYSDGT 1118
++DGT Y+G W G HG+GT+TW N C XXXXXXXXXXXXXXX XXXXXXXXXXXXXXX L I G+TL G W GVPDF PP DGYKRFVFPDGKG+Y+G+W+ KRHGQG+F F N D XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +W + +QC XXXXXXXXXXXX HYF S +PG S+ Y XXXXXXXXXXXX YVDA G H G W G+CPE+DF+ +P+ SG FRY F GGTYEG+W NR PHG+GRM Y+DGT
Sbjct: 17 YQDGTVYEGSWRNGKHHGKGTITWPNTCAXXXXXXXXXXXXXXXCTFPGGEXXXXXXXXXXXXXXXTLHIAGKTLQGSWSNGVPDFAPPRDGYKRFVFPDGKGIYEGYWKDRKRHGQGTFIFENNDKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTYAWGSIRQCYVXXXXXXXXXXXXXHYFASDAPGAQSE--------YXXXXXXXXXXXXXXKYVDADGSVHLGTWEKGVCPEIDFNAIPD-SGQFRYQFQGGTYEGQWANRMPHGKGRMVYADGT 296
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 446.4 |
| Seed ortholog evalue | 1.3e-122 |
| Seed eggNOG ortholog | 2880.D7G1L7 |
| Model size | 1307 |
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| EggNOG free text desc. | Translation initiation factor IF-2, N-terminal region |
| EggNOG OGs | COG5253@1,KOG0229@2759 |
| Ec32 ortholog description | MORN motif |
| Ec32 ortholog | Ec-26_000910.1 |
| Cds size | 1095 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842412.446714-CDS-E_fasciculatus_S2_contig7504:1474..1738 | 1696842412.446714-CDS-E_fasciculatus_S2_contig7504:1474..1738 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 1475..1738 - |
| 1696842412.4657845-CDS-E_fasciculatus_S2_contig7504:2134..2188 | 1696842412.4657845-CDS-E_fasciculatus_S2_contig7504:2134..2188 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 2135..2188 - |
| 1696842412.4786327-CDS-E_fasciculatus_S2_contig7504:2430..2706 | 1696842412.4786327-CDS-E_fasciculatus_S2_contig7504:2430..2706 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 2431..2706 - |
| 1696842412.487681-CDS-E_fasciculatus_S2_contig7504:3161..3235 | 1696842412.487681-CDS-E_fasciculatus_S2_contig7504:3161..3235 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 3162..3235 - |
| 1696842412.4975421-CDS-E_fasciculatus_S2_contig7504:3450..3593 | 1696842412.4975421-CDS-E_fasciculatus_S2_contig7504:3450..3593 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 3451..3593 - |
| 1696842412.5073998-CDS-E_fasciculatus_S2_contig7504:3889..4061 | 1696842412.5073998-CDS-E_fasciculatus_S2_contig7504:3889..4061 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 3890..4061 - |
| 1696842412.5251157-CDS-E_fasciculatus_S2_contig7504:4680..4792 | 1696842412.5251157-CDS-E_fasciculatus_S2_contig7504:4680..4792 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7504 4681..4792 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842412.5411487-UTR-E_fasciculatus_S2_contig7504:4792..5004 | 1696842412.5411487-UTR-E_fasciculatus_S2_contig7504:4792..5004 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig7504 4793..5004 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7504.15670.1 >prot_E_fasciculatus_S2_contig7504.15670.1 ID=prot_E_fasciculatus_S2_contig7504.15670.1|Name=mRNA_E_fasciculatus_S2_contig7504.15670.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=365bp
MSSGKLIRKKQRNFEDGTRYDGGWERGLFHGQGTLTWANGCVYEGAFRRG ERHGTGTCTFPGGERYAGAWDKGKMHGEGTLEIKGRTLTGVWDQGVPDFN PPVDGYKRFVFPDGKGVYDGHWRGCKRHGQGSFAFSNGDVYEGQWSHGEM TGEGKYQHASGEMYEGQFKEGRMHGQGTYSWPNTKQCYTGKWQEGQRHGH GRHYFHSSSPGDDSDPEMATVGDYYDGEWKEGVMHGKGVYVDAGGERHAG LWVDGICPEVDFSHVPEGSGSFRYSFSGGTYEGEWLNRAPHGQGRMEYSD GTVYVGGWQDFKFHGYGKLVQRGVVFEGEWSEGRMHGSGSAGASPDIDDA RVDVAGEQEVAMGK* back to topmRNA from alignment at E_fasciculatus_S2_contig7504:1475..5004- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7504.15670.1 ID=mRNA_E_fasciculatus_S2_contig7504.15670.1|Name=mRNA_E_fasciculatus_S2_contig7504.15670.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3530bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7504:1475..5004- (Ectocarpus fasciculatus EfasUO2) ATGGGAATGCCCTGGAGGTTTCAAGATGTAACGGAGGCGGGGTGGTTCGG
GGGTGTCTGTGATTTCGTTCAAGGCGGGAGGCGATCTTTTTCGGGTTCCT
GCTCCAGGCCTTCACAACAGATCTCACAGCAGTGCACAGCCCGTCGTGTA
ACTCCTGTGTCCCCCTGGCGTTGAACCTGCGGGAAAAACTGTCCGTGAGA
TCTCGAGTACCAATGTCATCGGGCAAGCTGATTCGAAAAAAACAACGCAA
CTTCGAGGACGGCACAAGATACGATGGCGGATGGGAGAGAGGATTGTTCC
ATGGCCAGGGAACCTTGACGTGGGGTAGGTCCAAGCTAGGGTTCGGTGAT
AATTTTTTGGCAGTCCGTGAACAGACGATGTGTGGAGCACCGATCAATGC
AGACTGTTGTATATGTGTAGGCCGCCAGCAGCACGTTGTCTCTGCATATG
TATAGATGCTGCTGCTGCTGTGTGGGCAGAACCTCTTCTCCTATCCTTCC
AAAGACACCACAGATTAAGAACATATCTTACCACCGGTACTACAGTGGCA
CACTATTCATGCATGCGCGCGCCGTTGTACGCATCCAATGCACCTCACGC
CCATTCAGAAAGTGTTCTGGTTTCATGAGGTTTGCCTGCATTTCGTTTGC
GAAGAGGAGCGCTCCGGTGAGGCCCTCCCTGCTGTTGTTGGCACATCGGT
CTCTGCATCAATCAGAGAAACATCTAAGTTGGTTCAGGCTACATACATAT
TCGCGCTCCATATCCAAAAGTACCACAGGAGAGGAGGGAAGGGAGAGGAG
TCTCCTGTGTAAGCACGGGTCGGAGCTCCTAACCGACAGAAAATGCTGTG
AGTTCTGGTTAAATGTGATGACGTCAACGTGCTTTGCCTCATTGCGCTGC
TGTCCGTTGTTACTGTTGGCGTGCTTGGTTTTTGTTCTCAAAGCGAATGG
CTGCGTATACGAAGGTGCTTTCCGTCGGGGAGAGCGCCATGGAACTGGAA
CATGCACCTTTCCGGGAGGAGAGCGGTACGCGGGTGCCTGGGACAAAGGG
AAGATGCACGGAGAGGGAACTCTCGAAATCAAAGGGAGAACGCTTACCGG
CGTGTGGGATCAGGGGTGCGTGGTATTTAACGTATCTCTCCTTGCTTTGA
AAGCCTCCACAGGTCCTAAACAAGGCAACGTGGTACTGCAGAACCATCAA
GGGCGTCATGGGTCATTGCAGCACGCGCTAGAGTCTAGAGTGGCAGCAAG
AGACAGTCAAACCACCGCCGATGCCAATAGGTTGACATGACTTCACCTAG
TAGGTGCATCTGCTCGCTGAAAGCTCAAACGATGGTGTTTCTACTCTACT
CAACCGCCACGACTCCTGTGCAACCGTTCCGCTATCGATCTGTCGTACCA
TGTTTCCAAAGGGTCCCTGACTTCAACCCCCCCGTCGATGGTTACAAGCG
TTTCGTGTTTCCTGACGGAAAGGGTGTGTATGACGGGCACTGGCGAGGTT
GCAAGCGTCATGGCCAGGGATCGTTTGCCTTCTCGAATGGTGACGTTTAC
GAAGGTGGGTCCGATTTGCCGTATTTTAGAGACGAAGCAAAGTGACCACA
CGGAACAGATGCTGTCATTTTCTATCGAGTAGGCACATATATCAAGATGC
TGAGGATATTGGCACTTCAAGGCATCGTGATTTTCACCGTACTCACAGAG
ATTTCGCATGGGGTTTACCCATTCATCTGTTTTTACCTCGATATCCACTT
GTCGGAAACGTTCTTGAAGGCCAATGGTCCCACGGGGAGATGACTGGCGA
GGGAAAATATCAGCACGCTTCTGGGGAGATGTACGAGGGACAGGTCTGTA
GGGTCGACCACTATTGCTGTTTGACTAGAAATAGAATACAGCAAGACATC
GAGGGTCTCTCTCGCGAAAATGAGGGAAGGCTTGCTGATGGCTGCGGCGT
GAATTGGAGGAAAGGCCGTGACCATATCGTCGTCGGATCCTAGCGTGGAA
AGGGGCAGGGTACGGTCTACGCACTACAGTAGTTCGGAGCTCTTGCTTTA
CAGGATCCGGAGAAACCGGAACGAAGATGCTGCGCGGACTGTAGAGGAAA
AAAAATGACGTCCAATCCCGACACGACACCTGTGCCTCATATACCCACTC
GATTTCCAAAACATAGCGGCATGGGCATCAGTTCCACATCATCGAGTCAT
GCTGCTTCCGACAAATACAGGCACAGCTGTGTCACTCCAACTCATCCAGT
CTTTTTCATGTTTTCGACTCCAATGGATCTGCGACCACCTTAACCTAGTT
CAAGGAAGGGCGCATGCACGGACAGGGGACCTATTCCTGGCCCAACACCA
AGCAGTGCTACACCGGGAAGTGGCAGGAAGGGCAACGGCACGGCCACGGC
CGCCACTACTTTCACTCGAGCTCCCCGGGTGACGACAGTGACCCCGAGAT
GGCAACGGTGGGGGACTACTATGACGGAGAGTGGAAGGAGGGCGTGATGC
ATGGCAAGGGAGTTTACGTGGACGCCGGGGGTGAGAGGCACGCTGGCCTG
TGGGTGGACGGAATCTGTCCGGAGGTGATTTACGGGGAGATCGCGCAACA
TTGCCGAGACAGATGGATGTTGTAGAATAGCACCGTCACGAATGGTTGTG
CTCGATAAGACAACGTTCGCCGTCTCACTACAGCGTGTAAAGCACTGCCT
TCTGTGTGAGTGTATCGCTGCCTTTTTTGTGCGTACTTTGGCTAGTTGTG
GTGAGGATCGAATCGGTACTCTTGCTGATGATCTCCGCTTCCGCAATTCC
CGCCCACGAACCTCAGGTGGACTTCTCACACGTGCCAGAGGGCAGCGGCA
GCTTCAGATACAGTTTTTCGGTGAGGGTGGAATTGTCGGGAAGCAATAGA
AATAGTTGATATTGGGCAGGAGGCCACGGGAATGCCCATCATCAGCGGCG
TGATGGCCGCCTTCGGGGTGTGTTTCTGGCCGGACGTGTTCGAACCTGCG
CGCGGAATAAGCCGTATCTTTATAATATGGCAGGAGTTAATTCAGCCTTG
TCATGAGGATGATGGTGATGATGACACCGACCAGCACTGCCAGTGACTCG
ACAGCGCGGCTGGTACGAGATCCGATTTGTAGCTTGGCGAAAAATATAGA
GTTTAAGGTGCGGTCAGGGTCCGAAAATAAGGGGTGGCTACGTGTCAAAT
CTCAGCGGAGAGACTCATTCGTTGTTCATCACGCAACGTCGGTGCCTGTC
CTTCCTATCGCGTCAGGGTGGTACATACGAAGGAGAGTGGCTGAACCGAG
CGCCACACGGACAGGGCCGGATGGAATACAGCGATGGCACCGTCTACGTC
GGGGGCTGGCAGGATTTCAAGTTTCACGGCTACGGCAAACTCGTTCAAAG
GGGGGTGGTGTTCGAGGGAGAGTGGTCGGAAGGGCGCATGCACGGCTCTG
GCAGCGCTGGAGCATCACCAGACATTGACGATGCAAGGGTTGATGTTGCT
GGGGAGCAAGAGGTTGCCATGGGGAAATGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7504:1475..5004- >mRNA_E_fasciculatus_S2_contig7504.15670.1 ID=mRNA_E_fasciculatus_S2_contig7504.15670.1|Name=mRNA_E_fasciculatus_S2_contig7504.15670.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1095bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7504:1475..5004- (Ectocarpus fasciculatus EfasUO2) ATGTCATCGGGCAAGCTGATTCGAAAAAAACAACGCAACTTCGAGGACGG CACAAGATACGATGGCGGATGGGAGAGAGGATTGTTCCATGGCCAGGGAA CCTTGACGTGGGCGAATGGCTGCGTATACGAAGGTGCTTTCCGTCGGGGA GAGCGCCATGGAACTGGAACATGCACCTTTCCGGGAGGAGAGCGGTACGC GGGTGCCTGGGACAAAGGGAAGATGCACGGAGAGGGAACTCTCGAAATCA AAGGGAGAACGCTTACCGGCGTGTGGGATCAGGGGGTCCCTGACTTCAAC CCCCCCGTCGATGGTTACAAGCGTTTCGTGTTTCCTGACGGAAAGGGTGT GTATGACGGGCACTGGCGAGGTTGCAAGCGTCATGGCCAGGGATCGTTTG CCTTCTCGAATGGTGACGTTTACGAAGGCCAATGGTCCCACGGGGAGATG ACTGGCGAGGGAAAATATCAGCACGCTTCTGGGGAGATGTACGAGGGACA GTTCAAGGAAGGGCGCATGCACGGACAGGGGACCTATTCCTGGCCCAACA CCAAGCAGTGCTACACCGGGAAGTGGCAGGAAGGGCAACGGCACGGCCAC GGCCGCCACTACTTTCACTCGAGCTCCCCGGGTGACGACAGTGACCCCGA GATGGCAACGGTGGGGGACTACTATGACGGAGAGTGGAAGGAGGGCGTGA TGCATGGCAAGGGAGTTTACGTGGACGCCGGGGGTGAGAGGCACGCTGGC CTGTGGGTGGACGGAATCTGTCCGGAGGTGGACTTCTCACACGTGCCAGA GGGCAGCGGCAGCTTCAGATACAGTTTTTCGGGTGGTACATACGAAGGAG AGTGGCTGAACCGAGCGCCACACGGACAGGGCCGGATGGAATACAGCGAT GGCACCGTCTACGTCGGGGGCTGGCAGGATTTCAAGTTTCACGGCTACGG CAAACTCGTTCAAAGGGGGGTGGTGTTCGAGGGAGAGTGGTCGGAAGGGC GCATGCACGGCTCTGGCAGCGCTGGAGCATCACCAGACATTGACGATGCA AGGGTTGATGTTGCTGGGGAGCAAGAGGTTGCCATGGGGAAATGA back to top
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