mRNA_E_fasciculatus_S2_contig7444.15619.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Mitochondrial (energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWT2_ECTSI) HSP 1 Score: 297 bits (760), Expect = 7.630e-100 Identity = 148/150 (98.67%), Postives = 149/150 (99.33%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA 450
LLRRGAGAQF+MSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISR EGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA
Sbjct: 17 LLRRGAGAQFIMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA 166
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU70_9PHAE) HSP 1 Score: 293 bits (749), Expect = 5.540e-95 Identity = 147/150 (98.00%), Postives = 147/150 (98.00%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA 450
LL RGAGAQFVMSLPHGAFNYATLEVIMG SAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISR EGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA
Sbjct: 251 LLSRGAGAQFVMSLPHGAFNYATLEVIMGLSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRSEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGGA 400
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Mitochondrial (energy transfer protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP70_ECTSI) HSP 1 Score: 230 bits (587), Expect = 3.370e-73 Identity = 112/148 (75.68%), Postives = 128/148 (86.49%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAG 444
LL RGAGAQFVMSLPHGAFNYATLEVI+G SAK FP +WRE AGPVLDF++S VAT++CSVVSTPQ+V+ DRIM G+YPNL SG REI+R +GL GFY GWSANV+QKIPSYGLTWVF+Q KRL++K T R PT TE+FVLGA AAG
Sbjct: 41 LLTRGAGAQFVMSLPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAG 188
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLA3_9PHAE) HSP 1 Score: 229 bits (584), Expect = 5.540e-69 Identity = 111/148 (75.00%), Postives = 128/148 (86.49%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAG 444
LL RGAGAQFVMS+PHGAFNYATLEVI+G SAK FP +WRE AGPVLDF++S VAT++CSVVSTPQ+V+ DRIM G+YPNL SG REI+R +GL GFY GWSANV+QKIPSYGLTWVF+Q KRL++K T R PT TE+FVLGA AAG
Sbjct: 402 LLTRGAGAQFVMSVPHGAFNYATLEVILGCSAKIFPDEWRERAGPVLDFLSSSVATVVCSVVSTPQMVLTDRIMAGIYPNLASGVREITRTQGLPGFYVGWSANVAQKIPSYGLTWVFFQQFKRLHRKATDRPPTNTENFVLGAAAAG 549
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Mitochondrial (energy transfer protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5P9_9STRA) HSP 1 Score: 182 bits (461), Expect = 2.130e-54 Identity = 88/148 (59.46%), Postives = 111/148 (75.00%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAG 444
LL RGAGAQF++SLPHGAFN+ATLE + +++ F PA GPVLDF +S VAT +CS++STPQ+VI DRIM +YPNL S R IS+ EGL+GFY GW N++QKIPSYGLTWVF+Q K ++++ R PT E+F LGA AAG
Sbjct: 41 LLTRGAGAQFLLSLPHGAFNFATLEAVKEYTSSFLPA--AGAMGPVLDFFSSTVATTICSIISTPQMVITDRIMADIYPNLASAVRTISQTEGLKGFYAGWGPNLAQKIPSYGLTWVFFQQFKLAHQRVVRREPTNGENFALGAAAAG 186
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D1K6_9STRA) HSP 1 Score: 148 bits (374), Expect = 3.030e-41 Identity = 74/147 (50.34%), Postives = 99/147 (67.35%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAA 441
+L RGAGAQF +SLPHGA +A LE + +FP ++ AGP DFV+S V+T +CSV+STPQ+V+ DRIM G YPNL G R + + +G++G Y GW A ++QKIPSYGLTWVF+Q K + T E+F +GA+AA
Sbjct: 26 ILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLAHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAA 169
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D7A1_HETAK) HSP 1 Score: 150 bits (379), Expect = 4.450e-41 Identity = 79/149 (53.02%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFP-ADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAG 444
LL RGAGAQF++S+PHGA +A +E P A W AGP+ DF+ S V+T +CSVVSTPQ+VI DR+M G YP+L + I+R EGLRGFY GW ++QKIPSYGLTWV YQ +K ++ + R T E+F LGA AAG
Sbjct: 131 LLTRGAGAQFLLSMPHGAIAFAVVEQTKKTLTNLVPNAGWA--AGPLFDFMASTVSTTICSVVSTPQMVITDRLMAGRYPHLGAAVASIARTEGLRGFYNGWFTALAQKIPSYGLTWVLYQGAKDWHRGLVGREATDAENFGLGAFAAG 277
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H4F1_VITBC) HSP 1 Score: 150 bits (379), Expect = 8.430e-41 Identity = 77/145 (53.10%), Postives = 99/145 (68.28%), Query Frame = 1
Query: 10 RGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAG 444
RGAGAQF++SLPHGA N+A L + + P + AG V DF + AT LCSV+STPQ+V+ DRI+TG+YPNLVSG ++ R EG+RG YTGW + QKIPSY LTWV YQ + L+ I R P+ E+F++GA AAG
Sbjct: 165 RGAGAQFLISLPHGAMNFAVLGFMKHQMTRLMPI---KQAGFVFDFCSQASATFLCSVISTPQMVLVDRIVTGIYPNLVSGLSKLLRTEGVRGLYTGWFPGMIQKIPSYSLTWVAYQQLRNLHSVIFPRDPSDAENFLIGATAAG 306
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QN06_HETAK) HSP 1 Score: 148 bits (373), Expect = 2.920e-40 Identity = 71/149 (47.65%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAAGG 447
+L RG Q SLPHGAF+YA E + GF K P + AG LDF++S +TLLCS+VSTPQ+V+ DR M G+YP+L +G RE+ R +G GFY+GW ++ +KIPSYGLTW+F++ + + ++ R P ++F++GA+AAGG
Sbjct: 124 VLMRGMDVQLCFSLPHGAFSYAITEFVKGFMDKHVP---YKRAGFALDFLSSAASTLLCSIVSTPQMVLHDRCMAGIYPSLGAGVREVLRTQGPAGFYSGWVPSIVEKIPSYGLTWMFFKQLQEAWTRVVGRRPDNRDNFLIGALAAGG 269
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Match: S-adenosylmethionine (mitochondrial carrier protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7THW6_9STRA) HSP 1 Score: 150 bits (378), Expect = 6.160e-40 Identity = 75/147 (51.02%), Postives = 100/147 (68.03%), Query Frame = 1
Query: 1 LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVTSGVATLLCSVVSTPQVVIEDRIMTGMYPNLVSGFREISRKEGLRGFYTGWSANVSQKIPSYGLTWVFYQASKRLYKKITHRAPTATESFVLGAVAA 441
+L RGAGAQF +SLPHGA +A LE + +FP ++ AGP DFV+S V+T +CSV+STPQ+V+ DRIM G YPNLV G R + + +G++G Y GW A ++QKIPSYGLTWVF+Q K + T E+F +GA+AA
Sbjct: 265 ILTRGAGAQFALSLPHGALAFAVLEATKSTLSSWFPVNF---AGPAFDFVSSAVSTTICSVISTPQMVLTDRIMAGYYPNLVHGVRTVLKTDGVQGLYAGWFAALAQKIPSYGLTWVFFQQLKIARNRWMDHEATNGENFGMGALAA 408 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7444.15619.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7444.15619.1 >prot_E_fasciculatus_S2_contig7444.15619.1 ID=prot_E_fasciculatus_S2_contig7444.15619.1|Name=mRNA_E_fasciculatus_S2_contig7444.15619.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=150bp LLRRGAGAQFVMSLPHGAFNYATLEVIMGFSAKFFPADWRETAGPVLDFVback to top mRNA from alignment at E_fasciculatus_S2_contig7444:3121..5323- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7444.15619.1 ID=mRNA_E_fasciculatus_S2_contig7444.15619.1|Name=mRNA_E_fasciculatus_S2_contig7444.15619.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2203bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7444:3121..5323- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7444:3121..5323- >mRNA_E_fasciculatus_S2_contig7444.15619.1 ID=mRNA_E_fasciculatus_S2_contig7444.15619.1|Name=mRNA_E_fasciculatus_S2_contig7444.15619.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=450bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7444:3121..5323- (Ectocarpus fasciculatus EfasUO2)back to top |