mRNA_E_fasciculatus_S2_contig7385.15563.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE) HSP 1 Score: 656 bits (1693), Expect = 7.090e-235 Identity = 357/425 (84.00%), Postives = 367/425 (86.35%), Query Frame = 1
Query: 1 QVDTFQVPNNLQVRNTSVVATATPRPPXXXXXXXXXXXXXXXSIATTTDRQAEVLRVSWGDSPAGPQDPG---EGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIRPRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXX-GASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 1263
QVDTFQVPNNLQVRN SV + ++P TTDRQA VLRVSWGD PAGPQD EGPNT+TSTIPIDWLRRHCTSATARDLRRRHGGPADGP + PRPVLWGADVFS+ TPQ ACMSY+DVMADGALDEP XXXXXXXXXXXXXXXX GAS RLVDLIRS GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRA+EGGASIYVDGFAVAERLRAT+PEAFEFFS TSISYQCFDEGCHYMAEGPVFRLG GEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLS IIRDPSLVARIVLEPGECVIL+N RALHGRESFKGRRRMVGCYLGMDEL SSARVQR
Sbjct: 24 QVDTFQVPNNLQVRNASVASPSSP-----------DDARGGDGSTATTDRQAHVLRVSWGDIPAGPQDTRDGKEGPNTNTSTIPIDWLRRHCTSATARDLRRRHGGPADGPGLHPRPVLWGADVFSAG---TPQQQQPP----ACMSYEDVMADGALDEPEXXXXXXXXXXXXXXXXAPGASPRLVDLIRSHGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAREGGASIYVDGFAVAERLRATSPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGALGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSKIIRDPSLVARIVLEPGECVILNNHRALHGRESFKGRRRMVGCYLGMDELESSARVQR 430
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG7_ECTSI) HSP 1 Score: 501 bits (1290), Expect = 4.530e-176 Identity = 250/279 (89.61%), Postives = 255/279 (91.40%), Query Frame = 1
Query: 427 MSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 1263
MSY+DVMADGALD+P GAS RLVDLIRS GVALVRGVPTDEKGTEALALR+GGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVA+RLRATNPEAFEFFS TSISYQCFDEGCHYMAEGPVFRLGP GEVVQVRYNDYDRAPLDYL NEDIDRFYEYHASLS+IIRDPSLVARIVLEPGECVILDN RALHGRESFKGRRRMVGCYLGMDELHSSARVQR
Sbjct: 1 MSYEDVMADGALDDPEAAGSSPPPAP-------GASPRLVDLIRSHGVALVRGVPTDEKGTEALALRIGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVADRLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLPNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECVILDNHRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 272
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ6_9STRA) HSP 1 Score: 271 bits (692), Expect = 7.500e-86 Identity = 135/236 (57.20%), Postives = 169/236 (71.61%), Query Frame = 1
Query: 550 LIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
++R+ G+ LV G PT +GTEALA R+G +R TLYG GMWATSAE + EE D+AY+N L HTDC Y+ DPPG+QVFNCV A +GG S YVDGFAVA LR +PEAFEFF+ T Y C D+ H +A GPVF LG G+VVQVR+NDYDRAPLD+L DI+ FY++H L+++IR S + ++ L PG+ VI DN R +HGRE+F GRRRMVGCY+ D+ S ARV
Sbjct: 3 MLRAYGIVLVTGSPTTMEGTEALATRIG-VVRETLYG-GMWATSAEGA--EEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARV 234
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7S5_PYTOL) HSP 1 Score: 209 bits (531), Expect = 1.220e-59 Identity = 102/232 (43.97%), Postives = 146/232 (62.93%), Query Frame = 1
Query: 565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
G+ +V P+ TE + ++G + T+YG MW T+ + E+ + D+A +N L HTD Y+ DPPG+Q+FNC+ +A EGG S YVD F VAERLR NP AFEFF+ T + Y +D H P+ +L G +VQ R+NDYDRAPL +LS E+ + FY+YH L ++RDPS+ R+ L+ G+ +I+DNQR +H R++F G R ++GCY+G E S RV
Sbjct: 179 GLVMVHATPSSMDETEKFSRKIG-FVLETIYGT-MWTTNPQTE--EQEYNDTASTNIELLHHTDGTYMRDPPGLQIFNCIAQAGEGGDSRYVDAFHVAERLRRQNPAAFEFFTKTPLHYHHYDRDAHLATMEPIIQLDHAGNIVQFRHNDYDRAPLTHLSFEETELFYKYHGELLSLLRDPSMEFRVKLQVGQMIIVDNQRVMHARDAFSGGERALIGCYIGRTEYESRLRV 406
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYB6_GLOUD) HSP 1 Score: 207 bits (526), Expect = 8.800e-59 Identity = 102/232 (43.97%), Postives = 147/232 (63.36%), Query Frame = 1
Query: 565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGR-RRMVGCYLGMDELHSSARV 1257
G+ ++ P+ TEA + ++G LR T+YG MW T+ + ++ + D+A +N L HTD Y+ DPPG+Q+FNCV +A EGG S Y+D F V E+LRA NP A++F STT ++Y FD H P+ R+ VVQ R+NDYDRAPL +LS +D+ RFYEYH L ++RDP++ + L GE +++DNQR +HGR +F G R ++G Y+G +E S RV
Sbjct: 190 GLVMISNTPSSMDETEAFSRKIGFVLR-TIYGE-MWTTNPQTE--DQEYNDTASTNMELLHHTDGTYMRDPPGLQIFNCVAQAGEGGESRYIDAFHVVEKLRAQNPVAYKFLSTTPLNYHHFDNDAHMATMEPIIRVDHADNVVQFRHNDYDRAPLTHLSFDDVQRFYEYHRELMTLMRDPTMETTVKLRVGEMIVVDNQRVMHGRNAFDGGDRALIGSYIGRNEYDSRLRV 417
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF28_9STRA) HSP 1 Score: 206 bits (524), Expect = 2.220e-58 Identity = 111/245 (45.31%), Postives = 152/245 (62.04%), Query Frame = 1
Query: 526 GASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
G A L+ + G+ +V P+ TE + R+G LR T+YG MW T+ +++ E+ + D+A +N L HTD Y+ DPPG+Q+FNCV +A EGG S YVD F AERLRA +P AF F + T ++Y FD H A PV +L G VVQVRYNDYDRAPL +L +++FY +H +L ++RD SL A + L GE V++DNQR LHGR +F G R ++G Y+G +E S RV
Sbjct: 187 GDLAPLMTDLYKYGLVMVTATPSSMAETERFSRRIGFVLR-TIYGE-MWTTNPQSA--EQEYNDTASTNLELLPHTDGTYMRDPPGLQIFNCVAQAGEGGESRYVDAFHAAERLRAQDPAAFRFLAATPVNYHHFDADAHLAAMEPVIKLDHAGHVVQVRYNDYDRAPLTHLPFAAVEQFYRHHRALVRVLRDASLEATLKLRVGEMVVVDNQRVLHGRAAFDGGERSLIGSYIGRNEYDSRLRV 427
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN78_PYTIN) HSP 1 Score: 204 bits (520), Expect = 8.180e-58 Identity = 102/232 (43.97%), Postives = 144/232 (62.07%), Query Frame = 1
Query: 565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
G+ +V P+ TE + ++G + T+YG MW T+ + ++ + D+A SN L HTD Y+ DPPG+Q+FNC+V+A EGG S YVD + V E+LR P AF+F S T + YQ FD+ H P+ +L G VVQ R+NDYDRAPL +LS + +D FY +HA L IIRDP++ R L+ GE +I+DN R +H R++F G R ++GCY+G E S RV
Sbjct: 198 GIVMVHSTPSSMDETEKFSRKIG-FVMETIYGK-MWTTNPQTK--DQQYNDTASSNIELLHHTDGTYIRDPPGLQIFNCIVQAGEGGDSRYVDAYHVVEKLRRQFPAAFDFLSKTPLHYQTFDDDAHLTTMEPIIKLDHAGNVVQFRHNDYDRAPLTHLSFDQVDEFYRHHAELLKIIRDPAMEFRHKLQVGEMIIVDNHRVMHARDAFVGGERALIGCYIGRTEYESRLRV 425
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7L5_9STRA) HSP 1 Score: 190 bits (483), Expect = 1.800e-52 Identity = 100/232 (43.10%), Postives = 136/232 (58.62%), Query Frame = 1
Query: 565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
G+ V G P TE + ++G LR T+YG MW T+ E + D+A +N L HTD Y+ DPPG+Q+FNC+ +A EGG S Y+D F V E LR NPEAF S T + Y D H P+ R+ G VVQ R+NDYDRAPL +LS E++D FY+ H L +++R P + L+ G+ +I+DNQR +HGR +F G R ++GCY+G E S RV
Sbjct: 190 GLVRVTGTPKTMDATEKFSTKIGFVLR-TIYGT-MWTTNPTND--NEDYNDTASTNLELLHHTDGTYILDPPGLQIFNCIAQAGEGGESRYIDSFHVVETLRKENPEAFRVLSQTPLPYFTVDRDAHLSTMEPLIRVDYAGNVVQFRHNDYDRAPLTHLSFEEVDAFYKAHRKLLEVMRRPEMEFCTKLQVGDMMIVDNQRVMHGRHAFNGGERALIGCYIGRTEYESRLRV 417
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A083_9STRA) HSP 1 Score: 192 bits (487), Expect = 1.160e-51 Identity = 126/372 (33.87%), Postives = 178/372 (47.85%), Query Frame = 1
Query: 157 EVLRVSWGDSPAGPQDPGEGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIR-PRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQ----EGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
E L V W +D EG ++S+ +WLR+H S D P D R + VLWG D+ + M+YD +M DG D + L++ G+ LV+ P TEA A ++G + T+YG MW T + E + D+A +N L HTDC YL PPG+Q+FNCV ++ GG+S YVDGF VAE LRA P+A++FF T + + C D+ P+ +L G + R ND DR+ L +LS ED FY++H L I + +V + L G+ +I+DNQR LHGR +F G R ++GCY+G E S RV
Sbjct: 87 EALNVEW-------KDVVEGSTCTSSSFTSEWLRKHVYSTPKNDY------PVDYKQDRLEKKVLWGKDLMEKMPT---------------MTYDAMMHDGFRDG-------------------------MKLLQQHGLLLVKNTPDTMDATEAFARKIG-FVLETIYGK-MWTTRPQTE--EMSYNDTASTNLALPGHTDCTYLYTPPGLQIFNCVQQSHAGDPNGGSSRYVDGFHVAEWLRAKAPDAYDFFCRTKLPFYCIDDDTLLATMEPIIKLDYRGNIESFRLNDGDRSVLTHLSFEDTFAFYKHHKVLWQAINELEIVHK--LHEGDMMIVDNQRVLHGRHAFIGERALIGCYIGKTEYDSRLRV 399
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYC2_9STRA) HSP 1 Score: 187 bits (475), Expect = 1.460e-51 Identity = 129/371 (34.77%), Postives = 173/371 (46.63%), Query Frame = 1
Query: 157 EVLRVSWGDSPAGPQDPGEGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIR-PRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEG---GASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
+ L++ W QDP G S WLR H S+ PA+ R VLWG D+ S T YD +M DG D + L++ G+ LV+ P TEA A R+G + T+YG MW T + + E + D+A +N L HTDC YL PPG+Q+FNCV +A G GAS YVDGF VAERLR +P FEFFST + + C D+ V L G V R ND DRA L +LS E++ FY +H SL I + +V + L+ G+ +++DN R +HGR +F G R ++GCY+G E S RV
Sbjct: 81 DALQIQW-------QDPIAGSACKQSAFTSSWLRDHVYSSPKTTY------PANYRQDRLENKVLWGKDLADKMPSAT---------------YDAMMGDGFRDG-------------------------MRLLQQHGLLLVKNTPDSMDATEAFARRIG-FVLETVYGT-MWTTRPKTA--EMSYNDTASTNLELPAHTDCTYLYTPPGLQIFNCVQQAAGGPADGASRYVDGFHVAERLRQNDPATFEFFSTIKLPFYCLDDDTSLATMETVIDLDYRGNVQGFRLNDGDRAALTHLSFEEVGAFYAHHKSLWAAIDELEVVHK--LDEGDMMVVDNSRVMHGRHAFLGERALIGCYIGKTEYDSRLRV 392 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7385.15563.1 >prot_E_fasciculatus_S2_contig7385.15563.1 ID=prot_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=423bp QVDTFQVPNNLQVRNTSVVATATPRPPSSSSPADAEGGGDSSSIATTTDRback to top mRNA from alignment at E_fasciculatus_S2_contig7385:2786..6501- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7385.15563.1 ID=mRNA_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3716bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7385:2786..6501- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7385:2786..6501- >mRNA_E_fasciculatus_S2_contig7385.15563.1 ID=mRNA_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1269bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7385:2786..6501- (Ectocarpus fasciculatus EfasUO2)back to top |