mRNA_E_fasciculatus_S2_contig7366.15553.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7366.15553.1
Unique NamemRNA_E_fasciculatus_S2_contig7366.15553.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G837_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 3.410e-211
Identity = 322/404 (79.70%), Postives = 337/404 (83.42%), Query Frame = 1
Query:    1 MVSSSRASSFNRTGPSHFHVGCQKRDNLGEARDGFEEGGVPQADAANGPPPQGLPPSYEQMLMQPD--------------------------VAADDVNVGAGGTRSAGGEEAGDDGLGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIALVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLLVGAEAEGGSLHAERMETAVGCFELILLIGRKHETAIFCPHAQVLYSRPVPPPMVLS 1134
            MVS S A S N  GPS  HV CQKRDNL EAR GFEE GV QA +A+GPPPQ  PPSYEQ+ ++P                             AD+VNVGA GTRSAGGEEAGDDGLG VAKCR+RSKS+WIHFPHVELLFILYAFQGALAAQIDVLR+GSGALVPVAAIALVVYPV VLGVMLRVIFVRVLP  ATG+AFAVTQ+D YYTTNGQRGCRGFFSRVRKGL+EDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYAL EAAVIA VGV+IDNSQVQLL+FLGLNVVQLVLVV LTPFANRVVESMAACRVGVNAFCMVLLVGAEAEG S+HAERMETAVGCFELILLIGRKH  A F PHA  L  R V PP VLS
Sbjct:    1 MVSCSGAFSLNLPGPSRIHVRCQKRDNLREARAGFEESGVHQAASADGPPPQEPPPSYEQVAIEPGGQXXXXXXXXXXXXXXXXXXXXXXXXXXADNVNVGAEGTRSAGGEEAGDDGLGPVAKCRDRSKSLWIHFPHVELLFILYAFQGALAAQIDVLRHGSGALVPVAAIALVVYPVLVLGVMLRVIFVRVLPPVATGLAFAVTQKDTYYTTNGQRGCRGFFSRVRKGLEEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALMEAAVIAGVGVLIDNSQVQLLIFLGLNVVQLVLVVRLTPFANRVVESMAACRVGVNAFCMVLLVGAEAEGDSVHAERMETAVGCFELILLIGRKHRQAAFSPHAD-LSCRRVAPPTVLS 403          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: VWFA (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCW7_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 1.320e-164
Identity = 253/282 (89.72%), Postives = 267/282 (94.68%), Query Frame = 1
Query:  208 DDVNVGAGGTRSAGGEEAGDDGLGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIALVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLLVGAEAEGGSLHAERMETAVGCFELILLIG 1053
            DDVNVGA GTRSAGGEEAGDDGLG VAKCR+RSKS+WIHFPHVELLFILYAFQGALAAQ+DVLR+GSGALVPVAAIALVVYPV VL VM+RV+F RV P TATG+AFAVTQ+D YYTTNGQRGCRGFF RVRKGL+EDHSAFAWAKKGAWRTVENED KEQRLRNWFRIGFEPLFVDYTKAGSWFA+YAL EAAVIACVGV+ID+SQVQLL+FLGLNVVQ VLV HLTPFANRVVESMAACRVGVNAFCMVLLVGAEAEG S+HAERMETAVGCFELILLI 
Sbjct:  651 DDVNVGAEGTRSAGGEEAGDDGLGPVAKCRDRSKSLWIHFPHVELLFILYAFQGALAAQVDVLRHGSGALVPVAAIALVVYPVLVLWVMVRVVFARVFPPTATGLAFAVTQKDSYYTTNGQRGCRGFFWRVRKGLEEDHSAFAWAKKGAWRTVENEDAKEQRLRNWFRIGFEPLFVDYTKAGSWFALYALMEAAVIACVGVLIDSSQVQLLIFLGLNVVQFVLVAHLTPFANRVVESMAACRVGVNAFCMVLLVGAEAEGDSVHAERMETAVGCFELILLIA 932          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B8_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 6.490e-62
Identity = 106/113 (93.81%), Postives = 109/113 (96.46%), Query Frame = 1
Query:  604 KGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGV 942
            KGL+EDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYAL EAAVIA V V+IDNSQVQLL+FLGLNVVQLVLVV LTPFANRVVESMAACRVGV
Sbjct:  117 KGLEEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALMEAAVIAGVEVLIDNSQVQLLIFLGLNVVQLVLVVRLTPFANRVVESMAACRVGV 229          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L9_ECTSI)

HSP 1 Score: 205 bits (521), Expect = 8.560e-57
Identity = 132/311 (42.44%), Postives = 182/311 (58.52%), Query Frame = 1
Query:  130 DAANGPPPQGLPPSYEQMLMQPDVAADDVNVGAGGTRSAGGEEAGDDGLGAV-AKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIA-LVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLLVG-AEAEGGSLHAERMETAVGCFELILLIG 1053
            DA + P       S +  + +   AAD V+VG           +   GL A+ A CR RS S+W++FPH+ELLF+L+AF+GA+A+Q+  +R G    V  +A A LVVYPV ++ +  R   VRV P T   + F    ++  + T+G    R F S+VR GLKEDHS FAWA  GAW TVE  D +  R  + FRIGFEPLFVD+TK  SWF VY L E   IAC  V++D+S VQL LF GL+ +  +L+V   PFAN ++ +M AC   ++A  M +L   A     +  A+RM+TAV   +L+ L+ 
Sbjct:  197 DAESDPDELAASASNDGAMSREHAAADSVDVGVDFEEDGIPIRSRPKGLRAMLADCRYRSSSVWLYFPHIELLFLLFAFEGAMASQLATMRGGGCPWVFYSACASLVVYPVLMIILSYRTHRVRVAPDTL--IVFKPVGEEENHGTDGTVP-RSFLSKVRTGLKEDHSMFAWANTGAWETVETPDEETVREGDQFRIGFEPLFVDFTKKASWFTVYFLLEMTGIACTAVLVDDSVVQLFLFCGLHSLSFLLLVIFRPFANSIINTMGACLTLIDAASMAMLADTAHRWQRTSRAKRMDTAVVVLQLVALVA 504          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Liver (stage antigen 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN89_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 2.130e-56
Identity = 121/273 (44.32%), Postives = 175/273 (64.10%), Query Frame = 1
Query:  253 EEAGDDGLGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAI-ALVVYPVFVLGVMLRVIFVRVLPSTATGMAF------AVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCM-VLLVGAEAEGGSLHAERMETAVGCFELILL 1047
            E  G   L  +A+CRERS+S+W+HFPHVEL+++L+AF+GA+AAQ+  +R  +  LV + A+ AL+ +PV +   ++   F ++   +   + F      AV  +   YT+      R F S+VR+GLKE +S FAW+ KG W +V+  D +++R R+WFRIGFEPLFVD+T AGSWFAVYAL E    A VGVV+DNS +QL LF   N V  +L+V L PFAN ++  M A   G++A CM VL V A+  GG+  A ++++ V   +L+ L
Sbjct: 2383 ETVGRSKLSKIAECRERSQSVWLHFPHVELMYLLFAFEGAVAAQVSAIRENATLLVLILAVLALLFFPVLMTFNVMCTFFGKI--RSKKHIVFIPNADDAVEAESDLYTS-----VRSFGSKVRRGLKESYSMFAWSNKGEWESVDTPDEEDKRARDWFRIGFEPLFVDFTGAGSWFAVYALIELVANAVVGVVVDNSVLQLSLFGAFNTVSFLLLVVLKPFANGIINFMGAAVYGIDAACMAVLAVTADKWGGTERASQVDSVVVIVQLLTL 2648          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN93_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 1.590e-55
Identity = 121/288 (42.01%), Postives = 169/288 (58.68%), Query Frame = 1
Query:  232 GTRSAGGEEAGDDGLGA----------VAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAA-IALVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRG----FFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLL-VGAEAEGGSLHAERMETAVGCFELILL 1047
            GT  +  +E G  GLG           VA+CRE S+S W+HFPHVEL+F+ +A++GA+A+Q+  LR      V +AA +ALV YP+ +   +LR  FVRV P+T           D     + + G R     F S+VR G +EDHS FAWA KG W T E ++   +R   WFRIGFEPLFVD+TK+G+WF  + L E A + C+G +ID S +QL LF  L+ +  +L+V   PFAN V+ +M A  VG++A CM LL V A    G+  A ++++ V   +L  L
Sbjct:  996 GTDCSDYDEEGGGGLGTLTRAESRLSPVAECREHSRSAWLHFPHVELVFLFFAYEGAVASQVSALREAGCPPVMIAAGLALVFYPILMFVAVLRTFFVRVRPNTLIVFTPKEADDDTGDAGDAEEGQRARSASFLSKVRAGWEEDHSLFAWANKGTWETAETDNEGTRREGQWFRIGFEPLFVDFTKSGAWFVAFTLVEWAALGCIGALIDESVLQLSLFCALHTLSFLLLVVFRPFANSVINAMGAGLVGIDAVCMALLAVSASRWEGTAAAGKVDSVVMLLQLFAL 1283          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD90_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.030e-50
Identity = 116/262 (44.27%), Postives = 158/262 (60.31%), Query Frame = 1
Query:  274 LGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIA-LVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQ--RGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLL-VGAEAEGGSLHAERMETAVGCFELILL 1047
            L  VA CRE S S W+HFPHVEL+F+ +AF+GA+A+    +R      +   AIA +V+YP+ +   ++R +FVRV P     + F    +D    TNG    G  GF SR +    E++S F+WA KG W TV+  +    R  +WFRIGFEP+FVDYTK G+WF V +L E A IA VGV+IDNS VQLLLF GL     +++V L PFAN V+  + AC V ++A C  LL V A    G+  A  + +AVG  +++ L
Sbjct: 1601 LSPVAMCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDEL--LIFKTYDEDG---TNGNTPNGRGGFLSRFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSYVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVCTGLLAVAALKWEGTSRATDVNSAVGVLQIVSL 1857          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Mucin-1 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLG6_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.070e-48
Identity = 115/262 (43.89%), Postives = 157/262 (59.92%), Query Frame = 1
Query:  274 LGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIA-LVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQR-GCRG-FFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCMVLL-VGAEAEGGSLHAERMETAVGCFELILL 1047
            L  VA CRE S S W+HFPHVEL+F+ +AF+GA+A+    +R      +   AIA +V+YP+ +   ++R +FVRV P     + F    +D    TNG    CRG F S  +    E++S F+WA KG W TV+  +    R  +WFRIGFEP+FVDYTK G+WF V +L E A IA VGV+IDNS VQLLLF GL     +++V L PFAN V+  + AC V ++A    LL V A    G+  A  + +AVG  +++ L
Sbjct: 1560 LSPVATCREHSTSAWLHFPHVELVFLFFAFEGAVASFASAIRNSECPEMFYTAIAAMVLYPLLMFATVVRTLFVRVRPDEL--LIFKTYDEDG---TNGNAPNCRGGFLSHFKSSWAENYSLFSWADKGQWETVQTPNRNITREGDWFRIGFEPVFVDYTKRGTWFIVISLVEWASIALVGVMIDNSNVQLLLFCGLQSAMFLILVCLKPFANSVINGIGACIVAIDAVSTGLLAVAALKWEGTSRATDVNSAVGVLQIVSL 1816          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9C2_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.540e-48
Identity = 105/252 (41.67%), Postives = 157/252 (62.30%), Query Frame = 1
Query:  274 LGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIA-LVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANRVVESMAACRVGVNAFCM-VLLVGAEAEGGSLHAERMETAV 1023
            +G V+ CRE S+S W+H+PH+EL+F+ +AF+GA+ +Q+  LR  + + +  AA+A LV+YP+ ++ ++ R   V V P      A + T++          G     SR   GLK D S F+WA KG W TV+  + K +R  +WFRIGFEPLF D+T+AGSWF +Y L E AV+A + V++DNS +Q LLF  ++ +  VL+V   PFAN V+ ++AA  +  +A CM +L + A    G+  A RM+TAV
Sbjct:  350 IGQVSDCRELSQSPWLHYPHLELIFLFFAFEGAVTSQMAALRSANSSTILYAAVATLVLYPLLMVVMVARTHRVWVQPDALIVFASSETEE-------ALAGKPSTLSRTVSGLKNDFSLFSWADKGQWETVQTANDKARRKADWFRIGFEPLFADFTQAGSWFIIYTLIECAVLASIAVLVDNSAMQFLLFCAMHSLTFVLLVGWKPFANSVLNAVAAMVMLTDAVCMGMLALAAGTFNGTATAARMDTAV 594          
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5F3_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 1.580e-48
Identity = 95/212 (44.81%), Postives = 137/212 (64.62%), Query Frame = 1
Query:  274 LGAVAKCRERSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIA-LVVYPVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRVRKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKAGSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFANR 906
            +G V++CRE S+S W+H+PH+EL+F+L+AF+GA+ +Q+  LR  S + V  AA+A LV YPV ++ +++R   VRV       + F   + D      G  G    +S+   GL++D S FAWA KG W TV+  D   +R  +WFRIGFEPLF D+T+AGSWF VY L E AV+AC+ V++DN+ VQ  LF  ++ +  +L+V   PFANR
Sbjct:  183 IGQVSQCRELSQSAWLHYPHLELVFLLFAFEGAVTSQVSALRTTSSSTVFYAAVATLVFYPVLMVAMVVRTHRVRVRSDAL--IVFTSNESD-----EGSTGTSSIYSKTIAGLRKDSSLFAWADKGQWETVQTTDEDARRNADWFRIGFEPLFADFTQAGSWFIVYTLIEWAVLACIAVLVDNTAVQCGLFCAIHSMTFILLVACKPFANR 387          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7366.15553.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.410e-21179.70protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
VWFA1.320e-16489.72domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized6.490e-6293.81protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized8.560e-5742.44protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Liver2.130e-5644.32stage antigen 3 n=1 Tax=Ectocarpus siliculosus Tax... [more]
Uncharacterized1.590e-5542.01protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.030e-5044.27protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Mucin-11.070e-4843.89n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized1.540e-4841.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.580e-4844.81protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7366contigE_fasciculatus_S2_contig7366:92..2474 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score84.0
Seed ortholog evalue1.7e-13
Seed eggNOG ortholog2880.D8LIK9
Model size1149
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.structural constituent of cuticle
EggNOG OGsKOG3544@1,KOG3544@2759
Cds size1149
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842400.2793536-CDS-E_fasciculatus_S2_contig7366:91..5321696842400.2793536-CDS-E_fasciculatus_S2_contig7366:91..532Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7366 92..532 +
1696842400.2918093-CDS-E_fasciculatus_S2_contig7366:992..11581696842400.2918093-CDS-E_fasciculatus_S2_contig7366:992..1158Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7366 993..1158 +
1696842400.3028955-CDS-E_fasciculatus_S2_contig7366:1377..15531696842400.3028955-CDS-E_fasciculatus_S2_contig7366:1377..1553Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7366 1378..1553 +
1696842400.3245533-CDS-E_fasciculatus_S2_contig7366:1743..18651696842400.3245533-CDS-E_fasciculatus_S2_contig7366:1743..1865Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7366 1744..1865 +
1696842400.3402214-CDS-E_fasciculatus_S2_contig7366:2230..24741696842400.3402214-CDS-E_fasciculatus_S2_contig7366:2230..2474Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7366 2231..2474 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7366.15553.1prot_E_fasciculatus_S2_contig7366.15553.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7366 92..2474 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7366.15553.1

>prot_E_fasciculatus_S2_contig7366.15553.1 ID=prot_E_fasciculatus_S2_contig7366.15553.1|Name=mRNA_E_fasciculatus_S2_contig7366.15553.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=383bp
MVSSSRASSFNRTGPSHFHVGCQKRDNLGEARDGFEEGGVPQADAANGPP
PQGLPPSYEQMLMQPDVAADDVNVGAGGTRSAGGEEAGDDGLGAVAKCRE
RSKSIWIHFPHVELLFILYAFQGALAAQIDVLRYGSGALVPVAAIALVVY
PVFVLGVMLRVIFVRVLPSTATGMAFAVTQQDPYYTTNGQRGCRGFFSRV
RKGLKEDHSAFAWAKKGAWRTVENEDTKEQRLRNWFRIGFEPLFVDYTKA
GSWFAVYALSEAAVIACVGVVIDNSQVQLLLFLGLNVVQLVLVVHLTPFA
NRVVESMAACRVGVNAFCMVLLVGAEAEGGSLHAERMETAVGCFELILLI
GRKHETAIFCPHAQVLYSRPVPPPMVLSRSMS*
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mRNA from alignment at E_fasciculatus_S2_contig7366:92..2474+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7366.15553.1 ID=mRNA_E_fasciculatus_S2_contig7366.15553.1|Name=mRNA_E_fasciculatus_S2_contig7366.15553.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2383bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7366:92..2474+ (Ectocarpus fasciculatus EfasUO2)
ATGGTGTCATCTTCTAGGGCATCCTCGTTTAACCGAACAGGACCCTCTCA CTTCCATGTCGGCTGCCAGAAACGCGACAACCTAGGCGAGGCTCGTGATG GCTTTGAAGAAGGCGGCGTTCCGCAAGCCGACGCGGCGAATGGGCCGCCC CCGCAAGGGCTTCCTCCGAGCTACGAGCAGATGCTCATGCAGCCGGACGT TGCTGCTGACGACGTCAACGTTGGGGCGGGAGGCACACGTTCTGCTGGGG GAGAAGAAGCTGGAGATGATGGACTGGGAGCGGTAGCCAAGTGCCGGGAG CGGTCTAAATCAATATGGATTCACTTCCCTCACGTTGAGCTGTTGTTCAT CCTCTACGCGTTCCAGGGGGCCTTGGCGGCGCAGATTGATGTCCTGCGGT ACGGCAGCGGCGCCCTCGTACCCGTGGCAGCAATCGCCTTGGTGAGCACG ACGCGGACGCGACCCTATTCCTTCGTGTTTTCGCTATTTCCCAGAGAATT GTAGTCGACCCTATTCCTACCAAACGAGAAAATGAGAGGATGCGGCCTAG CGTATGCCGACTGAGACAACGTATGCCGTACACACACTGACGATGTCGCT CTGAGGGGGAGATCACGGAGTCTGGCCACCTATCGAAGCGTTCCAAGCAC AGTCTGGACCGTAGTGCCTACTGCTTGAGATAATGTGAGGCGTGGTTCGT TTGGCGGCGGCATTCATTCTCTGATTGGGCAAAACTTGCACCGGGCCTGC AAAACCCGAGCTTGGTGCCCGCGACCCTGTCTAGGGGCTTCGACCCCTCT ATTGTCGGGTATTTCCTTCTTTCCTGATCCTTTCTCTCTTTCTTCGAACG AGTGTCTTTTCGCGTCAAACCGGGGTTCTGCAATGTTTACTTTCCTTGCA GGTCGTGTACCCGGTCTTCGTGCTTGGGGTCATGCTTCGAGTCATTTTCG TTCGAGTTCTCCCTTCCACCGCCACGGGCATGGCCTTCGCAGTAACGCAG CAGGACCCCTACTACACCACCAACGGCCAAAGGGGCTGCCGGGGCTTCTT CTCGAGAGTTCGAAAAGGTGCGCACCAGGGAGCAAAGCTCCACCCACGAC TACACGACGACTACGTGCCTGCATTGCTCAATTCATGAACAGGAAACACC ACCAATATATGTAGTCTAGTCTATGTTTCACGTTCTCCTTCCACTTGAGA CGAGTCGCGAATCAGGACAACACCGTATGTGCTCTATCGTTGGACGTCGG TCTGTTCCCCTGTTCGGCCGAACCTCCCCCTTTAAGGTTTGAAGGAGGAT CACAGCGCGTTCGCGTGGGCCAAGAAGGGAGCGTGGAGGACTGTCGAGAA TGAAGACACGAAGGAGCAGAGGCTGAGGAACTGGTTCCGGATCGGCTTCG AGCCGCTGTTCGTGGACTACACCAAGGCTGGGTCCTGGTTTGCAGTGTAC GCTCTATCGGAGGTGCGCGCCTGGACAGATGCGTCACACCCTGGTACATA GCGGAGACCTACACAGTAGTTACCGCTGTTCACCTCTGTTTGTCTCTGCC CTTTTAGCGCCGTGCTTGCGTCCTACTGCGCAGTACACGTCGTCCCGTGT GATCCCGGTTCTACACTACATGCTCTCGTTCCGCCGTCTTCGGTCTTCGC AGGCAGCTGTCATCGCGTGCGTCGGAGTTGTGATTGACAACAGCCAGGTG CAACTGCTGCTTTTCCTGGGGTTGAACGTGGTGCAGCTCGTTCTTGTGGT GCACCTCACGCCTTTCGCCAACAGGTACGGGCGAGTACGGGGCGGACGAT TATTGGGTGCGCATTGAAACGCTGTCAGCGTGTGTGTTGAAGCACGGCCG TCGCAAGCAGCTCACTCACAACGGGCTCCACAGTCGAACCGGGGACCTAC GCGAGTATGCGTATCGATCCGCCGTAGGGTGTGAGGCCGTGGGGGTGGAT ATGTAGCTTTACGCGTCCACTATCGCAGAACATGTGTGCGAATTGTGTTT ATGCAGCGCCTTAACCCGCCTATTTGTGCACAGTGTACTCCCATCGCCAG TCCACCGCGAAACCTCGCGCAACGACATCTCGAGACTACTTCATGCGCTC TCAATCTGACGTACTTGGTGTTGTCTTCATCCACGGCAGGGTGGTCGAAT CCATGGCGGCATGCCGGGTGGGTGTCAACGCCTTCTGCATGGTCTTGCTC GTAGGCGCGGAGGCGGAAGGCGGCAGCCTGCACGCGGAGAGGATGGAGAC GGCGGTCGGATGCTTCGAGCTTATACTGCTGATCGGTAGGAAACACGAGA CAGCCATATTTTGTCCTCACGCTCAGGTTCTGTACTCTAGACCAGTTCCC CCGCCGATGGTTCTTTCGCGCAGTATGTCGTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7366:92..2474+

>mRNA_E_fasciculatus_S2_contig7366.15553.1 ID=mRNA_E_fasciculatus_S2_contig7366.15553.1|Name=mRNA_E_fasciculatus_S2_contig7366.15553.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1149bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7366:92..2474+ (Ectocarpus fasciculatus EfasUO2)
ATGGTGTCATCTTCTAGGGCATCCTCGTTTAACCGAACAGGACCCTCTCA
CTTCCATGTCGGCTGCCAGAAACGCGACAACCTAGGCGAGGCTCGTGATG
GCTTTGAAGAAGGCGGCGTTCCGCAAGCCGACGCGGCGAATGGGCCGCCC
CCGCAAGGGCTTCCTCCGAGCTACGAGCAGATGCTCATGCAGCCGGACGT
TGCTGCTGACGACGTCAACGTTGGGGCGGGAGGCACACGTTCTGCTGGGG
GAGAAGAAGCTGGAGATGATGGACTGGGAGCGGTAGCCAAGTGCCGGGAG
CGGTCTAAATCAATATGGATTCACTTCCCTCACGTTGAGCTGTTGTTCAT
CCTCTACGCGTTCCAGGGGGCCTTGGCGGCGCAGATTGATGTCCTGCGGT
ACGGCAGCGGCGCCCTCGTACCCGTGGCAGCAATCGCCTTGGTCGTGTAC
CCGGTCTTCGTGCTTGGGGTCATGCTTCGAGTCATTTTCGTTCGAGTTCT
CCCTTCCACCGCCACGGGCATGGCCTTCGCAGTAACGCAGCAGGACCCCT
ACTACACCACCAACGGCCAAAGGGGCTGCCGGGGCTTCTTCTCGAGAGTT
CGAAAAGGTTTGAAGGAGGATCACAGCGCGTTCGCGTGGGCCAAGAAGGG
AGCGTGGAGGACTGTCGAGAATGAAGACACGAAGGAGCAGAGGCTGAGGA
ACTGGTTCCGGATCGGCTTCGAGCCGCTGTTCGTGGACTACACCAAGGCT
GGGTCCTGGTTTGCAGTGTACGCTCTATCGGAGGCAGCTGTCATCGCGTG
CGTCGGAGTTGTGATTGACAACAGCCAGGTGCAACTGCTGCTTTTCCTGG
GGTTGAACGTGGTGCAGCTCGTTCTTGTGGTGCACCTCACGCCTTTCGCC
AACAGGGTGGTCGAATCCATGGCGGCATGCCGGGTGGGTGTCAACGCCTT
CTGCATGGTCTTGCTCGTAGGCGCGGAGGCGGAAGGCGGCAGCCTGCACG
CGGAGAGGATGGAGACGGCGGTCGGATGCTTCGAGCTTATACTGCTGATC
GGTAGGAAACACGAGACAGCCATATTTTGTCCTCACGCTCAGGTTCTGTA
CTCTAGACCAGTTCCCCCGCCGATGGTTCTTTCGCGCAGTATGTCGTGA
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