mRNA_E_fasciculatus_S2_contig7248.15440.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7248.15440.1
Unique NamemRNA_E_fasciculatus_S2_contig7248.15440.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 577 bits (1486), Expect = 4.650e-199
Identity = 317/428 (74.07%), Postives = 347/428 (81.07%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGN-NTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAPNGPDGTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSNVGSRVVSPTHPTAEGSSASAAATPTFFSDPGRGIPRFPNASLLFSSSSSDIEGRFGYGDDGEEEDADLEMGM 1281
            VDGITCS GGKA  FT DP PV   N     EEWGTV EC QGPA V+VIGNSKPSIILTE +TGD++VIVEETSSE +FLYSVW ATG     AAG+SSV+IAYAFHI+STVRLAEAVVT IVNGVA +GGG ACFGLLRA+N+G  +T DFS  YG   +KA PFGEDP  H I SLKD E+I+IG+EMNTN MVAFA+VIGLSFIG ALTLFLCPKYEMD++NRDELLR   LQA+GL DDPSRHSAMRIEVQRE RSR+L + ISESDSERSGC RFLLRRGPE TDD VPATDN PNG DG P PR    M LGGV+T L K  PR RNRAI+P   APAMVLTASPVPSN GSR+VSPTHPTAEGSSAS AATPTF S+PGRG  RFP+ASLLF S SSD +G+ GY DD EEEDAD+EMGM
Sbjct:  211 VDGITCSSGGKAQTFTDDPIPVTL-NRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGG-ACFGLLRAYNRGPYDTRDFSALYGK--QKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEVTDDPVPATDNTPNGRDGVPFPRGPAHMYLGGVLTRLCKTIPRSRNRAINPEPLAPAMVLTASPVPSNAGSRMVSPTHPTAEGSSASTAATPTFLSEPGRGSSRFPDASLLFRSLSSD-DGKTGYADDDEEEDADIEMGM 633          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 568 bits (1465), Expect = 4.900e-197
Identity = 308/429 (71.79%), Postives = 338/429 (78.79%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGN-NTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAPNGPDGTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSNVGSRVVSPTHPTAEGSSASAAATPTFFSDPGRGIPRFPNASLLFSSSSSDIEGRFGYGDDGEEE-DADLEMGM 1281
            VDGITCS GG+A  FT DP PV  +N     E WGTV EC QGPAG+DVIG+SKPSIILTE +TGD++VIVEETSSE +FLYSVW ATG     AAG+SSV+IAYAFHI+STVRLAEAVVT IVNGVA EGGG ACFGLLRA+N+G  +T DFSDSYG   +KA+PFGEDP  H I SLKD+EHI++G+EMNTN MVAFA+VIGLSF G  LTLFLCPKYEMDV+NRDELLR I LQA+GL DDPSRHSAMRIEVQRE                   C RFLLRRGPE TDD VPATD+APNG DG P+PRR   M LGGV+TWL KP PRPRN AI+P   APAMVLTASPVPSN GSRVVSPTHPTAEGSSASA ATPTF S+PGRG  RFP+ASLLF SSSSD+EG  GY D  EEE D D EMGM
Sbjct:  211 VDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGG-ACFGLLRAYNRGPYDTVDFSDSYGK--QKAMPFGEDPVSHYINSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQAQGLPDDPSRHSAMRIEVQREXXXXXXXXXXXXXXXXXXRCARFLLRRGPEVTDDPVPATDSAPNGRDGVPVPRRPAHMYLGGVLTWLGKPIPRPRNHAINPEPLAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASATATPTFLSEPGRGASRFPDASLLFRSSSSDVEGITGYADYNEEEGDVDAEMGM 636          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 4.760e-76
Identity = 190/430 (44.19%), Postives = 237/430 (55.12%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRD-ELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAPNGPDGTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSNVGSRVVSPTHPTAEGSSASAAATPTFFSDPGRGIPRFP---NASLLFSSSSSDIEGRFGYGDDGEEEDADLEMG 1278
            VDGITCS  G     T D T V RRN     EEWGTV EC +GP   +  G SKPSIILT +  GD++VIVEETS   +FLYSVW ATGD SI AAGDSSV+IAYAFHIASTVRLAEAVVTGIVNGVA  GGGGACFGLLRA++KG++T +F +    G EKA PFGEDPE   + SL + E I  G+ MN NAMVAF  ++ LSFIGF +T FL  K +MD+++R  E     TL A+     P   +  R      G  R     + ++     G       RG +  +              G   P RL+ +S       L + FP P N  I+P   A ++ L+ SPVP  +G    SPT       S +         +P  G+P  P    AS+LF S  S+ E   G  +  + +D D+  G
Sbjct:  214 VDGITCSSNG-----TRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGD-SITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAG-GGGGACFGLLRAYSKGSDTPEFEE---YGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDRHYEHQARSTLHAR---KTPQGRATPRDLPPGAGVPRRPLQALRDAHLRPEG-------RGEQARERRYQR---------GRRQPERLLGLSHEKRARGLGRAFPGPMNNFIYPESVASSVTLSGSPVPLPLGPTTASPTL------SPAVVVRGVAVPNPRPGVPLIPPDRGASVLFESVFSESEDDDGDNNGRDADDGDVGTG 608          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 4.330e-66
Identity = 161/369 (43.63%), Postives = 209/369 (56.64%), Query Frame = 1
Query:    1 VDGITCS-LGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAPNGPD---GTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTAS--PVPSNVGSRVVSP 1089
            VD ITC   GG    +              D   WG+   C +GP   +   +S+P IIL E   G+  VIVEE  +  +FLYSVW A   D        S ++AY+FHI+STVRLAEAVVTGIVNG   E GGG CFGLLR FN G +  +   +     E+A PFGE PE   + SL+D E I +G+ MNTNA+VAF  ++ LS +G   ++ L    EMDV++RDELLR I+ QA+G  +DPS  S MRI VQ+E R   L V IS SD +++GC RFLLRR P  T   +P  D   +  D   G PLP    RM +G V   + + +P   N   +PV  + + V +AS  PVPS+ GS V +P
Sbjct:  212 VDSITCKGTGGDVYLY--------------DEAAWGSFLWCGEGPLAENKT-SSQPVIIL-EKSEGEVSVIVEEVGTHPSFLYSVWTAGSAD--------SKELAYSFHISSTVRLAEAVVTGIVNG---ETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKE-RGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLPLGRPRMFIGSVRFGMGRAYPGRNNNFRYPVALSASPVPSASTTPVPSHAGSLVGTP 552          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 4.500e-56
Identity = 142/360 (39.44%), Postives = 197/360 (54.72%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDD-PSRHSAMRIEVQREGRSRNLAVFISES-DSERSGCTRFLLRRGPETTDDTVPATDNAPNGPD---GTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSN 1065
            V+ + CS     +       PV R+     SEEWG V EC  GP   +    ++P+IILT+N T +++VI+EET++  +FLYSVWK  GD         SV + YAFHIASTVRLAEAVVTGIV G   E  GG CFG+LRAF++G    +  D Y   + KALPFGE+P+   +  L D E I  GI++N  AM     V+ L+ +G    ++L     MD+++RDEL+R ++LQ  G + D  ++HS MRI V+RE     ++V IS++  +E  GC RF   +    T D  P  D      D   G   P     + LGGV     +PFP       +P     A+ L+ASP P++
Sbjct:  236 VEAVNCSSSSDPLK----DAPVYRKMN-NKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGD---------SVTLTYAFHIASTVRLAEAVVTGIVLG---ESSGGGCFGMLRAFSRGPEPPE--DEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNG-GISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AVSLSASPTPTS 571          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 6.330e-53
Identity = 142/366 (38.80%), Postives = 204/366 (55.74%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNR-----DELLRVITLQAKGLSDDPS-RHSAMRIEVQREGRSRNLAVFISES-DSERSGCTRFLLRRGPETTDDTVPATDNAPNGPDG---TPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSNV 1068
            V+ + CS  G+  +      PV R+     SEEWG V EC  GP   +    ++P+IILT++ T +++VI+EET++  +FLYSVWK  G+         SV+++YAFHIASTVRLAEAVVTGIV G   E  GG CFG+LRAF++G N  +  D YG  I KALPFGE+P+   +  L D E I  GI++N  AM     V+ L+ +G    ++L     MD+++R     DEL+R ++LQ +    DP+  HS +RI V+RE    +++V IS++  +E  GC RF   +    T D  P  D      DG     +P     + LGGV     +PFP       +P     A+ L+ SP P+++
Sbjct:  237 VEAVDCSSSGRLKD-----APVYRKIN-NKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGE---------SVNLSYAFHIASTVRLAEAVVTGIVLG---ESTGGGCFGMLRAFSRGPNPPE--DEYGEMI-KALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHSKIRIFVRREDNG-SISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AISLSVSPTPTSI 576          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 6.150e-41
Identity = 111/272 (40.81%), Postives = 154/272 (56.62%), Query Frame = 1
Query:  100 WGTVRECAQGPAGVDVIGNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISES-DSERSGCTRFLLRRGPETTDDTVPATDNAPNGPD 912
            WG   +C +GP    +   S P+++LT   +G   VIVEE+SS   FLYSVW A G D        SV++AY FH+ STVRL EAV+TGIV+G  +   GGACFGLLR F++     ++ D    G+++A PFGE P    +  ++D E I  G+E+N NA+V    V+  + +     + L     MDV++RDELLR ++LQ     D  + H A+RI V+RE  S ++ VFI++S D E+    RFL RR    T   V   D  P G D
Sbjct:  236 WGNALDCERGPRPTGLT-TSPPAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTAEGSD--------SVELAYLFHVHSTVRLVEAVITGIVHGETE---GGACFGLLRVFSE--TRVEYED----GLDRASPFGEIPTGDTV-LVQDLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRRED-SGHITVFINDSHDKEQRAWERFLRRR----TSKVVEGDDRLPAGGD 483          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT7_ECTSI)

HSP 1 Score: 149 bits (376), Expect = 2.470e-40
Identity = 95/206 (46.12%), Postives = 106/206 (51.46%), Query Frame = 1
Query:  487 ALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAVVIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAPNGPDGTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTASPVPSNVGSRVVSPTHPTA 1104
            A PFGEDP  H IPSL+D EHI++G+EMNT+ MVAFA+V+GLSFIG ALTLFLCPKYEMD++NRDELLR I LQA+GL DDPSRHSAM I+                                                     PL                                  PAMVLTASPV SN GSRVVSPTHPTA
Sbjct:    2 ATPFGEDPVSHRIPSLRDKEHIIVGVEMNTSGMVAFALVMGLSFIGIALTLFLCPKYEMDIYNRDELLRAINLQAQGLPDDPSRHSAMHIQ-----------------------------------------------------PL---------------------------------TPAMVLTASPVASNPGSRVVSPTHPTA 121          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 6.590e-22
Identity = 88/264 (33.33%), Postives = 133/264 (50.38%), Query Frame = 1
Query:   82 AGDSEEWGTVRECAQGPAGVDVIGNSK--PSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSSVDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTADFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGI---EMNTNAMVAFAVVIGLSFIGFALTLFLC--PKYEMDVHNRDELLRVITLQA-KGLSDDPSRHSAMRIEVQREGRSRNLAVFISESDSERSGCTRFLLR 849
            A +S +WG V EC  GP+ V+   N +  P +IL  +  G++Y+IVEE SS  +FLYSVW   G+            + +AF+++ST RL EA+V+G          GG C  +L  F+  N T   +     G  +  PFGE P    +  L   E IV+G+   +M T   V   VV G +F G      LC   +  +DV++RD+L+R I+L + +G    P    A++I V++E R+   ++ IS+ D    GC     R
Sbjct:  217 AEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW-VPGE-----VKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXX---GGGCLDMLTKFSVQNATYSLN-----GALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGC-----LCFHSRKALDVYDRDQLIRAISLPSGEGADGKPV---ALKIYVRQE-RNNGFSIIISD-DGVYRGCAGLKKR 456          
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT8_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 1.630e-13
Identity = 38/58 (65.52%), Postives = 41/58 (70.69%), Query Frame = 1
Query:    1 VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVIGNSKPSII 174
            V+GITCS GGK  N T D  PV  +N   D EEWGTV EC QGPA +DVIG SKPSII
Sbjct:  150 VEGITCSSGGKGANLTNDFVPVTLKNATDDIEEWGTVLECDQGPARIDVIGKSKPSII 207          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7248.15440.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Uncharacterized4.650e-19974.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.900e-19771.79protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.760e-7644.19protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.330e-6643.63protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.500e-5639.44protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.330e-5338.80protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.150e-4140.81protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1... [more]
Uncharacterized2.470e-4046.12protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.590e-2233.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.630e-1365.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7248contigE_fasciculatus_S2_contig7248:3957..5499 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop0
Start0
Model size1281
Hectar predicted targeting categoryother localisation
Exons2
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-25_000340.1
Cds size1281
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842388.993525-CDS-E_fasciculatus_S2_contig7248:3956..45601696842388.993525-CDS-E_fasciculatus_S2_contig7248:3956..4560Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7248 3957..4560 -
1696842389.0053864-CDS-E_fasciculatus_S2_contig7248:4822..54991696842389.0053864-CDS-E_fasciculatus_S2_contig7248:4822..5499Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7248 4823..5499 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7248.15440.1prot_E_fasciculatus_S2_contig7248.15440.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7248 3957..5499 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7248.15440.1

>prot_E_fasciculatus_S2_contig7248.15440.1 ID=prot_E_fasciculatus_S2_contig7248.15440.1|Name=mRNA_E_fasciculatus_S2_contig7248.15440.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=427bp
VDGITCSLGGKAINFTGDPTPVNRRNEAGDSEEWGTVRECAQGPAGVDVI
GNSKPSIILTENKTGDSYVIVEETSSEHNFLYSVWKATGDDSIDAAGDSS
VDIAYAFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAFNKGNNTA
DFSDSYGVGIEKALPFGEDPEPHIIPSLKDHEHIVIGIEMNTNAMVAFAV
VIGLSFIGFALTLFLCPKYEMDVHNRDELLRVITLQAKGLSDDPSRHSAM
RIEVQREGRSRNLAVFISESDSERSGCTRFLLRRGPETTDDTVPATDNAP
NGPDGTPLPRRLVRMSLGGVMTWLNKPFPRPRNRAIHPVRPAPAMVLTAS
PVPSNVGSRVVSPTHPTAEGSSASAAATPTFFSDPGRGIPRFPNASLLFS
SSSSDIEGRFGYGDDGEEEDADLEMGM
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mRNA from alignment at E_fasciculatus_S2_contig7248:3957..5499-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7248.15440.1 ID=mRNA_E_fasciculatus_S2_contig7248.15440.1|Name=mRNA_E_fasciculatus_S2_contig7248.15440.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1543bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7248:3957..5499- (Ectocarpus fasciculatus EfasUO2)
GTTGACGGCATCACGTGCTCGTTAGGAGGCAAGGCGATAAACTTCACCGG TGATCCCACTCCAGTTAACCGCAGGAACGAAGCCGGCGACAGCGAAGAAT GGGGCACCGTTCGGGAGTGTGCCCAAGGGCCCGCGGGTGTCGACGTCATC GGCAACAGCAAGCCCTCGATCATTCTCACCGAGAACAAGACGGGAGACTC ATACGTGATCGTAGAGGAGACCAGCAGCGAACACAACTTCCTCTACTCCG TCTGGAAGGCAACCGGGGACGATTCCATCGACGCTGCCGGCGACTCCTCC GTCGACATCGCCTACGCCTTCCACATTGCGTCCACCGTACGGCTTGCCGA GGCGGTGGTCACCGGGATCGTAAACGGTGTGGCCGACGAGGGCGGCGGCG GCGCTTGTTTCGGCCTCCTCCGAGCGTTCAATAAAGGCAATAATACAGCG GATTTTTCTGATTCCTATGGCGTGGGCATAGAAAAGGCGTTGCCGTTCGG CGAGGATCCCGAGCCCCACATAATCCCTTCCTTGAAGGACCATGAGCACA TCGTCATCGGGATCGAGATGAACACCAATGCGATGGTGGCCTTCGCTGTG GTGATAGGCCTTAGCTTCATCGGCTTTGCGTTGACCCTCTTCTTGTGTCC AAAGTACGAGATGGACGTCCACAACAGGTATGCTTCCTAGCGAGGTGAAT ATTTGTCGGTAGCAGGATGGTTGCGATATTGTTGGCTGATTGTAACCACA TGCGTATTGTCAGCTTGTCTTGCATCAGGTCTTCGTGCACATGTCATGGG TCTGAGACGTTTCGTGCAAGGTGCGTTCAAGGAAAGAGCACCACGCCACC GTTCGTCACACCATTCCTCATCTTGCCTGTGCCACAAACAACAGAGCACG AGCCACCATCCGCCGTTTTCCTGCCCACACACCGCGCAGGGACGAGCTGC TCCGCGTGATCACCTTGCAGGCGAAGGGCTTATCCGACGATCCGTCAAGG CACTCCGCCATGCGCATCGAAGTCCAGAGGGAAGGTCGAAGCAGAAACTT GGCCGTCTTTATCAGCGAGTCCGACAGCGAACGGAGCGGCTGCACGCGCT TCCTTCTAAGGCGAGGGCCCGAGACGACCGATGACACCGTGCCGGCCACA GATAACGCTCCCAACGGACCTGACGGGACCCCCTTGCCGAGGCGCCTGGT CCGTATGTCCCTTGGTGGTGTTATGACGTGGTTGAACAAGCCCTTTCCCC GCCCAAGGAACCGCGCCATCCACCCTGTGCGTCCAGCCCCAGCCATGGTC CTGACCGCATCGCCGGTGCCGTCCAACGTCGGGTCTAGGGTGGTTTCACC GACACACCCAACCGCCGAAGGATCATCTGCGTCTGCGGCCGCGACACCGA CGTTTTTCTCCGATCCCGGAAGGGGCATCCCACGGTTCCCAAACGCGTCG CTTCTGTTCAGCAGCTCGAGCTCGGACATCGAAGGGAGATTCGGCTACGG CGATGATGGTGAGGAGGAGGATGCTGACTTGGAGATGGGCATG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7248:3957..5499-

>mRNA_E_fasciculatus_S2_contig7248.15440.1 ID=mRNA_E_fasciculatus_S2_contig7248.15440.1|Name=mRNA_E_fasciculatus_S2_contig7248.15440.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1281bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7248:3957..5499- (Ectocarpus fasciculatus EfasUO2)
GTTGACGGCATCACGTGCTCGTTAGGAGGCAAGGCGATAAACTTCACCGG
TGATCCCACTCCAGTTAACCGCAGGAACGAAGCCGGCGACAGCGAAGAAT
GGGGCACCGTTCGGGAGTGTGCCCAAGGGCCCGCGGGTGTCGACGTCATC
GGCAACAGCAAGCCCTCGATCATTCTCACCGAGAACAAGACGGGAGACTC
ATACGTGATCGTAGAGGAGACCAGCAGCGAACACAACTTCCTCTACTCCG
TCTGGAAGGCAACCGGGGACGATTCCATCGACGCTGCCGGCGACTCCTCC
GTCGACATCGCCTACGCCTTCCACATTGCGTCCACCGTACGGCTTGCCGA
GGCGGTGGTCACCGGGATCGTAAACGGTGTGGCCGACGAGGGCGGCGGCG
GCGCTTGTTTCGGCCTCCTCCGAGCGTTCAATAAAGGCAATAATACAGCG
GATTTTTCTGATTCCTATGGCGTGGGCATAGAAAAGGCGTTGCCGTTCGG
CGAGGATCCCGAGCCCCACATAATCCCTTCCTTGAAGGACCATGAGCACA
TCGTCATCGGGATCGAGATGAACACCAATGCGATGGTGGCCTTCGCTGTG
GTGATAGGCCTTAGCTTCATCGGCTTTGCGTTGACCCTCTTCTTGTGTCC
AAAGTACGAGATGGACGTCCACAACAGGGACGAGCTGCTCCGCGTGATCA
CCTTGCAGGCGAAGGGCTTATCCGACGATCCGTCAAGGCACTCCGCCATG
CGCATCGAAGTCCAGAGGGAAGGTCGAAGCAGAAACTTGGCCGTCTTTAT
CAGCGAGTCCGACAGCGAACGGAGCGGCTGCACGCGCTTCCTTCTAAGGC
GAGGGCCCGAGACGACCGATGACACCGTGCCGGCCACAGATAACGCTCCC
AACGGACCTGACGGGACCCCCTTGCCGAGGCGCCTGGTCCGTATGTCCCT
TGGTGGTGTTATGACGTGGTTGAACAAGCCCTTTCCCCGCCCAAGGAACC
GCGCCATCCACCCTGTGCGTCCAGCCCCAGCCATGGTCCTGACCGCATCG
CCGGTGCCGTCCAACGTCGGGTCTAGGGTGGTTTCACCGACACACCCAAC
CGCCGAAGGATCATCTGCGTCTGCGGCCGCGACACCGACGTTTTTCTCCG
ATCCCGGAAGGGGCATCCCACGGTTCCCAAACGCGTCGCTTCTGTTCAGC
AGCTCGAGCTCGGACATCGAAGGGAGATTCGGCTACGGCGATGATGGTGA
GGAGGAGGATGCTGACTTGGAGATGGGCATG
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