mRNA_E_fasciculatus_S2_contig7243.15432.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ1_ECTSI) HSP 1 Score: 434 bits (1115), Expect = 2.090e-143 Identity = 311/406 (76.60%), Postives = 314/406 (77.34%), Query Frame = 1
Query: 10 TQDFSGRNVGDSEDSVVVSRDSSAEEITAGAAQSISAAPAPSLPWGTVAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASPTSRVPHPFLSGARPSSTPAAEERKGFARTSSPPSFSTGGHPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHQVTSPPTPAASAANTPREAPTPAVQQPVAPASSLPSSGHLAAVEEQSQQSXXXPRASAAAADGNEPGVDTKQEREEETPPVPVPGWALGYSTSASFSSAATGTRGVGGEVAATAAXXXXXXXXXXXXXXXXXXXXHGCSDEAGEVLEGLRGDDAAEDLANVRAVLPVEDAAATSGPGYVGQRFIQAAEALSESPQLRRAAGAAATAVSAAAGTARVQFTYTSRTIGK 1227
TQDF+ RNVGDSEDSV VSRDSSAEE+TA AA SISAAPAPSLPWG VAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASPTSRVPHPFLSGARPSST AAEERKGFARTSSP T G XXXXXXX XXXXXXXXXXXXXXXXXXX QVTSPPTPAA AANTP E P AVQQPVAPASSLPSS HLAAVE XXX AD NEPGV TKQEREEETPPVPVPG ALGYSTS FSSAATGTRG GGEVAATAA XXXXXXX HG SD+AGE E LRGDD AEDL NVRAVLPVED AAT G GYVGQRFIQAAEALSESPQLRRAAGAAATAVSAAAGTARVQFTYTSRTIGK
Sbjct: 3 TQDFARRNVGDSEDSVAVSRDSSAEEVTAEAAHSISAAPAPSLPWGRVAPSPDSSQPLPGPWGRLQEVMDEIKVMSPASPTSRVPHPFLSGARPSSTAAAEERKGFARTSSPLPMPTRGR---------IAGSSSXXXXXXXRIADSRQXXXXXXXXXXXXXXXXXXXPRSLSPSSSPRQVTSPPTPAALAANTPCETPPTAVQQPVAPASSLPSSQHLAAVEXXXXXXXXXXXXXXXXADANEPGVHTKQEREEETPPVPVPGLALGYSTSPPFSSAATGTRGAGGEVAATAAPXXXXXXXSDSGAAPVGTASHGFSDQAGEEPEDLRGDDTAEDLVNVRAVLPVEDDAATGGRGYVGQRFIQAAEALSESPQLRRAAGAAATAVSAAAGTARVQFTYTSRTIGK 399
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: GOLD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIZ0_ECTSI) HSP 1 Score: 371 bits (952), Expect = 3.360e-120 Identity = 242/307 (78.83%), Postives = 250/307 (81.43%), Query Frame = 1
Query: 1207 TSRTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGIDPAAPXXXXXXXXXXXXXXXXXXAFGGGVGSVGGGEDTEAFAIDESEGEETSAYSAGVSTDRARVAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVPKTINIEEFLAMPETGRGDEVGGDRDDGA--DDGASK 2121
TS +ILVASAKSFEEFVDEQLQEDGSGQVLRREG TGLLVPRGKQLSQAFIVAPGCCLCWEFRVKD+DLGFALRRRFQGMGGSTEEDIFELKR + S +TFQGRWTA+SD +APAVVIMVWDNSYSCLRPKTLAYKAQVNRPGIDPAAPXXXXXXXXXXXXXX AFGG VGSVGG EDTEAFAIDESEGEETSAYSAGV TDRARVAV XXXXXXXXXXXXXXX XXXXXX GVPKT+NIE+FLAMPETG GD GGDRD A DD ASK
Sbjct: 10 TSHDAVQILVASAKSFEEFVDEQLQEDGSGQVLRREGGTGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDYDLGFALRRRFQGMGGSTEEDIFELKRYS-SAETFQGRWTANSDSDAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGIDPAAPXXXXXXXXXXXXXXQPPVAFGGSVGSVGGAEDTEAFAIDESEGEETSAYSAGVGTDRARVAVGSGXXXXXXXXXXXXXXXGVDASATTTSRRQGADPTIRGKGXXXXXXWREMEGEGVPKTVNIEDFLAMPETGSGDGGGGDRDGAAADDDSASK 315
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: GOLD (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBJ5_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.990e-27 Identity = 66/156 (42.31%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 1186 ARVQFTYTSRTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGIDP 1653
A+ + TS+T+ + + ++ V E +E+ +V+R + L VPRG + S ++V GC +CWE+RVKD+D+GFA+R R Q MGG+ EEDI + R S + +G+WTAD DR+ V+++WDN +S LR KTLAYK +V+RPG P
Sbjct: 333 AKDTYATTSQTVAEAIALGHIKLDQIVAEADREEFY-EVIRTDALMDLTVPRGGRYSLPYLVQQGCSICWEYRVKDYDIGFAVRLRLQAMGGAIEEDICSMARFG-SGEAHRGKWTADEDRS----VVLIWDNKFSMLRSKTLAYKVEVHRPGRPP 482
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HLX1_POLGL) HSP 1 Score: 94.4 bits (233), Expect = 6.490e-17 Identity = 56/145 (38.62%), Postives = 82/145 (56.55%), Query Frame = 1
Query: 1213 RTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGI 1647
RT G VA S + ++ +E+ + ++ +GA L VP + + A+ V+ G L W FRVKDHD+GFA+R R Q GGS EE++ ++R + DT G W AD DR +I+ +DN YS LR KT+AY +P +
Sbjct: 238 RTEGVSAVAWKGSARDTLENAAREE-QWKGIKIQGAEELAVPARTEHTCAYHVSKGSTLRWTFRVKDHDIGFAVRMRIQVWGGSQEEEVLSIERYD-NADTISGSWVADEDRT----MILAFDNRYSKLRSKTVAYLVGTEKPPV 376
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A813AZC1_9DINO) HSP 1 Score: 89.7 bits (221), Expect = 3.020e-16 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1213 RTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGI 1647
RT G VA S + +D +E+ + ++ +GA L VP + + A+ V G L W FRVK+HD+GFA+R R Q GG+ EE++ ++R + DT G W AD DR +I+ +DN YS LR KT+AY +P +
Sbjct: 99 RTEGVSAVAWRGSARDTLDIAAREE-QWKDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYD-NKDTISGSWVADEDRT----MILAFDNKYSKLRAKTVAYIVGTEKPPV 237
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=2 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1MKL5_ALECA) HSP 1 Score: 90.5 bits (223), Expect = 4.160e-16 Identity = 48/113 (42.48%), Postives = 67/113 (59.29%), Query Frame = 1
Query: 1303 LRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRP 1641
++ +GA L VP + + A+ VA G L W FRVKDHD+GFA+R R Q GGS EE++ ++R S DT G W AD + +++ +DN YS LR KT+AY +P
Sbjct: 173 IKVQGAEELSVPARTEHTSAYHVAKGSTLRWTFRVKDHDIGFAVRMRVQEWGGSREEEVLGVERYD-STDTISGSWVADEAQT----IVLAFDNRYSRLRAKTVAYLVGTEKP 280
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=2 Tax=Symbiodinium TaxID=2949 RepID=A0A812PXX9_9DINO) HSP 1 Score: 89.7 bits (221), Expect = 1.210e-15 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1213 RTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGI 1647
RT G VA S + +D +E+ + ++ +GA L VP + + A+ V G L W FRVK+HD+GFA+R R Q GG+ EE++ ++R + DT G W AD DR +I+ +DN YS LR KT+AY +P +
Sbjct: 187 RTEGVSAVAWRGSARDTLDIAAREE-QWKDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYD-NKDTISGSWVADEDRT----MILAFDNKYSKLRAKTVAYIVGTEKPPV 325
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812ZCU9_9DINO) HSP 1 Score: 90.5 bits (223), Expect = 6.960e-15 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1213 RTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGI 1647
RT G VA S + +D +E+ + ++ +GA L VP + + A+ V G L W FRVK+HD+GFA+R R Q GG+ EE++ ++R + DT G W AD DR +I+ +DN YS LR KT+AY +P +
Sbjct: 188 RTEGVSAVAWRGSARDTLDIAAREE-QWKDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDIGFAVRMRIQVWGGAQEEEVLAMERYD-NKDTISGSWVADEDRT----MILAFDNKYSKLRAKTVAYIVGTEKPPV 326
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: GOLD (domain-containing protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9DTX3_SYMMI) HSP 1 Score: 89.7 bits (221), Expect = 9.000e-15 Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 1
Query: 1213 RTIGKILVASAKSFEEFVDEQLQEDGSGQVLRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAYKAQVNRPGI 1647
RT G VA S + +D +E+ + ++ +GA L VP + + A+ V G L W FRVK+HD+GFA+R R Q GG+ EE++ ++R + DT G W AD DR +I+ +DN YS LR KT+AY +P +
Sbjct: 188 RTEGVSAVAWRGSARDTLDIAAREE-QWKDIKVQGAEELSVPARTEHTCAYHVTKGSTLRWTFRVKEHDVGFAVRMRVQVWGGAQEEEVLAMERYD-NKDTISGSWVADEDRT----MILAFDNKYSKLRAKTVAYIVGTEKPPV 326
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Match: Hypothetical (protein n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AHQ6_NOCSC) HSP 1 Score: 83.6 bits (205), Expect = 2.010e-13 Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 1303 LRREGATGLLVPRGKQLSQAFIVAPGCCLCWEFRVKDHDLGFALRRRFQGMGGSTEEDIFELKRQACSLDTFQGRWTADSDRNAPAVVIMVWDNSYSCLRPKTLAY 1620
++ GA ++VP + + + V G L W FRVKD+D+GF R R Q GGS EE++ ++R S DT G W AD +R +++V+DN+YS LR KT+A+
Sbjct: 224 IKIRGAEEIVVPARTEHTSVYHVHKGTTLRWTFRVKDNDIGFGTRIRVQAWGGSKEEEVLAVERYD-SADTISGSWVADEERT----MVLVFDNTYSRLRSKTIAF 324 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7243.15432.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7243.15432.1 >prot_E_fasciculatus_S2_contig7243.15432.1 ID=prot_E_fasciculatus_S2_contig7243.15432.1|Name=mRNA_E_fasciculatus_S2_contig7243.15432.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=708bp MEQTQDFSGRNVGDSEDSVVVSRDSSAEEITAGAAQSISAAPAPSLPWGTback to top mRNA from alignment at E_fasciculatus_S2_contig7243:504..6064- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7243.15432.1 ID=mRNA_E_fasciculatus_S2_contig7243.15432.1|Name=mRNA_E_fasciculatus_S2_contig7243.15432.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5561bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7243:504..6064- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7243:504..6064- >mRNA_E_fasciculatus_S2_contig7243.15432.1 ID=mRNA_E_fasciculatus_S2_contig7243.15432.1|Name=mRNA_E_fasciculatus_S2_contig7243.15432.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2124bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7243:504..6064- (Ectocarpus fasciculatus EfasUO2)back to top |