mRNA_E_fasciculatus_S2_contig7239.15428.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI) HSP 1 Score: 551 bits (1420), Expect = 6.190e-171 Identity = 277/350 (79.14%), Postives = 310/350 (88.57%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSS--FEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
CST++PVDVYGRRLS H+++SLELA++ EAE+ E EDS FEP D +V GR+KA+RFFE AAERTYL +ER +LCAFVSG GEEAMWEVTVKSILQF+PGM+VA+AAEAEGL+AYERSMG LPGVTVSGTQNPATA LYADKYCS SE+ILYVKPGSVLSR+FT KDTHSPRGDLLVVH GSQGSYHD +L RR+A+VLGFEAPSFTQGTDLMLPGDAN YLRE+LGL + Q DG+ DA+IALQ+FVDFDQVSAVPQVLAA+AYSR+ PGVWF+DPRGWVGQNLFKEASIWDIPLVKPR+TCTIA+D LDSASPKTA+ LQSSVDFFA GGKCANGLI A
Sbjct: 1458 CSTREPVDVYGRRLSG-HQDFSLELARLTEAENSEDEDSEDGFEPRVDVEVGGREKAVRFFEAAAERTYLGEVERGNLCAFVSGWAGEEAMWEVTVKSILQFMPGMKVAVAAEAEGLDAYERSMGRLPGVTVSGTQNPATATLYADKYCSFSELILYVKPGSVLSRSFTSKDTHSPRGDLLVVHAGSQGSYHDTELSRRSASVLGFEAPSFTQGTDLMLPGDANYYLREALGLKIGSDGLQGDGDGDAVIALQKFVDFDQVSAVPQVLAAVAYSRETPGVWFIDPRGWVGQNLFKEASIWDIPLVKPRFTCTIAADKLDSASPKTAETLQSSVDFFANGGKCANGLIAAA 1806
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE) HSP 1 Score: 535 bits (1378), Expect = 7.660e-171 Identity = 274/350 (78.29%), Postives = 306/350 (87.43%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDS--SFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
CST++PVDVYGRRLSA E+ +LAQ MEAED E E+S S+EP + +V GR+KAIRFFE AAER YL + R DLCAFVSG VGEEAMWEVTVKSILQF+PGM+VAIAAE+EGL+AYERSMG LPGVTVSGTQNPATAAL+ADKYCS SE+ILYV+PGSVLSR+FTPKDTHSPRGDLLVVH GSQGSYHD +L R+++VLGFE PSFTQGTDLMLPGDAN Y+RE+LGL + Q+D + DA+IALQEFV FDQVSAVPQVLAA+AYSRK PGVWFVDPRGWVGQNLFKEASIWDIPLVKPR+TCTIASD LDS+SPKTAQVLQ+SV FFA GGKCANGLI A
Sbjct: 768 CSTREPVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEV-GREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCSFSELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDSSSPKTAQVLQNSVVFFANGGKCANGLIADA 1116
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI) HSP 1 Score: 477 bits (1227), Expect = 1.170e-145 Identity = 247/349 (70.77%), Postives = 286/349 (81.95%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
CST PVDVYGRRL+ D + L +A++ ED E+E D E + + DV R+ I FFEEAAER Y L+R +LCAFV GR GEEAMW+VTVKSILQFVPGMRVAIAAEAEGL+AYERSMGGLPGVTVSGTQNPATAAL+AD+YC + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH GSQGSYHDAQL RR+A+VLGF+APSFT GTDLMLP AN LRESLGL H A Q DG+ +++ALQE V+FDQ SAVPQVLAALAYSR PGVWF+DP+ WVGQ+LF+EASIW+IPLVKPRYTC IA L+ SPKTA+VLQS++DFF++GGKCANGLI++
Sbjct: 1112 CSTVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVD-REDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASL-QHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEPGSPKTAEVLQSNLDFFSMGGKCANGLIDF 1458
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI) HSP 1 Score: 474 bits (1221), Expect = 2.010e-144 Identity = 249/348 (71.55%), Postives = 284/348 (81.61%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
CST PVDVYGRRLSA E+ L +A+M+EAED +E S DV R++AIRFFEEAAER+Y L+R +LCAFV GR GEEAMWEVTV SILQF+PG+RVAIAAEAEGL+AYERSMGGLPGVT+S TQNPATAAL+AD+YC + +ILYV+PGSVLSR FT KDTHSPR DLLVV+ GSQGSYHDAQL R+A+VLGF+APSFT GTDLMLP N LRESLGL H A Q DG+ +LIALQE V FDQVSAVPQVLAALAYSR+ PGVWFVDP+ WVGQNLFKEASIWD+PLVKPRYTC IA L+ SP TA+VLQS++DFF+ GGKCANGLI++
Sbjct: 1176 CSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS-------VDVD-REQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASL-QHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPVQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIDF 1514
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE) HSP 1 Score: 455 bits (1171), Expect = 1.350e-143 Identity = 240/347 (69.16%), Postives = 274/347 (78.96%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIE 1046
CST PVDVYGRRLSA E L +A+M+EAE+ E S DV R KAIRFFEEAAER + L+R +LCAFV GRVGEEAMWEVTVKSILQF+PGMRVAIAAE+EGL+AYERS+GGLPG +S TQN ATAAL+AD+YC + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH GS GSYHD+QL R+A+VLGF+APSFT GTDLMLP N LRESLG A Q DG+ +LIAL+E V FD+VSA+PQVLAALAYSR+ PGVWFVDP+ WVGQNLFKEASIWD+PLVKPRY C IA L+ SP TA VLQS++DFF+ GGKCANGLI+
Sbjct: 487 CSTMMPVDVYGRRLSASDEGDPLRVAKMIEAEEVGDEWS-------VDVD-RVKAIRFFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASL-QHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNTANVLQSNLDFFSKGGKCANGLID 824
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE) HSP 1 Score: 414 bits (1065), Expect = 3.500e-129 Identity = 223/355 (62.82%), Postives = 269/355 (75.77%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSG-RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQ----VLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
CST PVDV LS D+E+YSL++ Q ME EDGE+E + SFE + V G R+ I FFEEAAER + L+R +LCAFV GRV EEAMWEVTVKSILQF+PGMRVAIAA A+GL+AYERSMGG PGVT+S TQNPATA+L+AD++C + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH G QGSY + + RR+ VLG EAPSFT+GTDLMLP AN LRESLG+ A ++DG+ A+ AL E VDF++VS+VPQ +LAALAY+R PGVWF DP+ W GQ LF+EASIWDIPL KPR+TC IA L+ S A LQ+++DFF+ GGKC +GLIEY+
Sbjct: 373 CSTVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERV---GVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIAL-TLEPDSLHAATTLQNNLDFFSRGGKCEDGLIEYS 723
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI) HSP 1 Score: 411 bits (1056), Expect = 1.340e-128 Identity = 223/354 (62.99%), Postives = 269/354 (75.99%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSG-RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQ----VLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
CST PVDV LS D E++SL++A MEAED E+E + SFE + DV G R+ I FFEE AER + L+R +LCAFVSGRV EEAMWEVTVKSILQF+PGMRVAIAA A+GL+AYERSMGGLPGVT+S T NPATA+L+AD++C + +ILYV+ GSVLSR FT KDTHSPRGDLLVVH G QGSY D + RR+ VLG EAPSFT+GTDL+LP AN LR SLG+ A ++DG A++AL E DF++VSAVPQ +LAALAY+R PGVWF DP+ WVGQ+LF+EASIWDIPLVKPR+TC IA AL+ + A LQ+++DFF+ GGKC +GLIEY
Sbjct: 315 CSTAMPVDVRDLWLSTDSEDHSLQIAHAMEAEDREEEAEGSFERV---DVDGIREGVISFFEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRSGLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIAL-ALEPDILRAATTLQNNLDFFSRGGKCEDGLIEY 664
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE) HSP 1 Score: 317 bits (812), Expect = 1.260e-91 Identity = 172/259 (66.41%), Postives = 198/259 (76.45%), Query Frame = 3
Query: 9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFE-PIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFD 779
CST PVDVYGRRL+ D + L A++ ED E+E E + + DV R+ I FFEEAA+R Y L+R +LCAFVSGRVGEE MWEVTVK ILQF+PGMRVAIAAEAEGL+ YERSMGG PGVTVSGTQN ATA+L+AD+YC + +ILYVKPGS LSR FT KDTHSPRGDLLVVH G QGSYHDAQL RR+ +VLGF+APSFT GTDLMLP AN LRESLGL H A Q DG+ +++ALQE V+FD
Sbjct: 545 CSTVMPVDVYGRRLTPDDGSRPLREAKIFSVEDSEEEADGVEGELANVDVD-REDVISFFEEAAKRPYSQDLKRRNLCAFVSGRVGEETMWEVTVKIILQFMPGMRVAIAAEAEGLDTYERSMGGRPGVTVSGTQNLATASLFADQYCGAGAALILYVKPGSDLSRFFTSKDTHSPRGDLLVVHTGFQGSYHDAQLRRRSVSVLGFDAPSFTDGTDLMLPVGANEDLRESLGLRHGASL-QHDGDGASMVALQEMVEFD 801
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Imm (upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI) HSP 1 Score: 280 bits (716), Expect = 5.030e-79 Identity = 149/297 (50.17%), Postives = 201/297 (67.68%), Query Frame = 3
Query: 162 RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSE--IILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPK-TAQVLQSSVDFFAIGGKCANGLI 1043
R + RFFE + R + + +ER+ +CAFV+G + EVTV S+L+FVPGMRV +AAE + ++AYER++GGLPGV+VS TQ+ TA+ +AD+YC ++ +I Y+K GSV+SR+FT KDTHSP+GDLLVV G H L RTA VLGFEAP FT GTDL+LP ANA LR +L + DA+ A+++ D +AVPQ+LAAL Y R PG+WF +P+ WV +LF+ ASIW+IPLVKPR+TC + D + SA A +LQ ++DFFA+GG C G+I
Sbjct: 405 RVEVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVF----GKGHSGDLADRTANVLGFEAPPFTTGTDLILPVGANADLRAALASEKTVN--------DAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCEL--DHVSSADESDVADILQRNLDFFAMGGTCERGVI 687
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE) HSP 1 Score: 273 bits (698), Expect = 1.570e-75 Identity = 153/328 (46.65%), Postives = 197/328 (60.06%), Query Frame = 3
Query: 147 ADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYC---SLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQ-GSYHDAQLVRRTAAVLGFEA------------PSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDS-----------ASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
A K F +AA+ + + + LCAF++GR GE W VTV SI +F PGMRVA+AAE E ++ YER++G LPGVTV+ T + TA+LYAD+YC + + +I+YV GS SR T KDTHSPRGDLLV H S S+H A L ++TA+VL PSFT GTDLMLP ANA LR+ K +A A+Q D D ++AVPQ LAAL YSR+ GVWF+DP+ WV + LFKE SIWDIPLVKPR+TC + L + +S + AQVLQ +DFF+ GG C+NG I++
Sbjct: 480 APTGATDKQALAFAQAAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEEAVHLYERAVGPLPGVTVASTPSALTASLYADRYCGGTNSTSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSATASHHVAHLAKQTASVLALSEGGAAPPPPLPLPPSFTFGTDLMLPAGANADLRDLFA--------SKGDKATFQQAVQTLADLDDLAAVPQALAALQYSRQPEGVWFLDPQAWVSEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHASAGAARGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDF 799 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7239.15428.1 >prot_E_fasciculatus_S2_contig7239.15428.1 ID=prot_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=323bp MMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCback to top mRNA from alignment at E_fasciculatus_S2_contig7239:248..3382+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7239.15428.1 ID=mRNA_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3135bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7239:248..3382+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7239:248..3382+ >mRNA_E_fasciculatus_S2_contig7239.15428.1 ID=mRNA_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=969bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7239:248..3382+ (Ectocarpus fasciculatus EfasUO2)back to top |