mRNA_E_fasciculatus_S2_contig7239.15428.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7239.15428.1
Unique NamemRNA_E_fasciculatus_S2_contig7239.15428.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI37_ECTSI)

HSP 1 Score: 551 bits (1420), Expect = 6.190e-171
Identity = 277/350 (79.14%), Postives = 310/350 (88.57%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSS--FEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
            CST++PVDVYGRRLS  H+++SLELA++ EAE+ E EDS   FEP  D +V GR+KA+RFFE AAERTYL  +ER +LCAFVSG  GEEAMWEVTVKSILQF+PGM+VA+AAEAEGL+AYERSMG LPGVTVSGTQNPATA LYADKYCS SE+ILYVKPGSVLSR+FT KDTHSPRGDLLVVH GSQGSYHD +L RR+A+VLGFEAPSFTQGTDLMLPGDAN YLRE+LGL   +   Q DG+ DA+IALQ+FVDFDQVSAVPQVLAA+AYSR+ PGVWF+DPRGWVGQNLFKEASIWDIPLVKPR+TCTIA+D LDSASPKTA+ LQSSVDFFA GGKCANGLI  A
Sbjct: 1458 CSTREPVDVYGRRLSG-HQDFSLELARLTEAENSEDEDSEDGFEPRVDVEVGGREKAVRFFEAAAERTYLGEVERGNLCAFVSGWAGEEAMWEVTVKSILQFMPGMKVAVAAEAEGLDAYERSMGRLPGVTVSGTQNPATATLYADKYCSFSELILYVKPGSVLSRSFTSKDTHSPRGDLLVVHAGSQGSYHDTELSRRSASVLGFEAPSFTQGTDLMLPGDANYYLREALGLKIGSDGLQGDGDGDAVIALQKFVDFDQVSAVPQVLAAVAYSRETPGVWFIDPRGWVGQNLFKEASIWDIPLVKPRFTCTIAADKLDSASPKTAETLQSSVDFFANGGKCANGLIAAA 1806          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJP6_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 7.660e-171
Identity = 274/350 (78.29%), Postives = 306/350 (87.43%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDS--SFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
            CST++PVDVYGRRLSA  E+   +LAQ MEAED E E+S  S+EP  + +V GR+KAIRFFE AAER YL  + R DLCAFVSG VGEEAMWEVTVKSILQF+PGM+VAIAAE+EGL+AYERSMG LPGVTVSGTQNPATAAL+ADKYCS SE+ILYV+PGSVLSR+FTPKDTHSPRGDLLVVH GSQGSYHD +L  R+++VLGFE PSFTQGTDLMLPGDAN Y+RE+LGL   +   Q+D + DA+IALQEFV FDQVSAVPQVLAA+AYSRK PGVWFVDPRGWVGQNLFKEASIWDIPLVKPR+TCTIASD LDS+SPKTAQVLQ+SV FFA GGKCANGLI  A
Sbjct:  768 CSTREPVDVYGRRLSAHPEDRFPQLAQQMEAEDSEDENSEGSYEPRVEVEV-GREKAIRFFEAAAERPYLGEINRGDLCAFVSGGVGEEAMWEVTVKSILQFMPGMKVAIAAESEGLDAYERSMGRLPGVTVSGTQNPATAALFADKYCSFSELILYVRPGSVLSRSFTPKDTHSPRGDLLVVHAGSQGSYHDTELSHRSSSVLGFETPSFTQGTDLMLPGDANYYVREALGLKIGSEGLQEDRDGDAVIALQEFVYFDQVSAVPQVLAAVAYSRKTPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRFTCTIASDKLDSSSPKTAQVLQNSVVFFANGGKCANGLIADA 1116          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI63_ECTSI)

HSP 1 Score: 477 bits (1227), Expect = 1.170e-145
Identity = 247/349 (70.77%), Postives = 286/349 (81.95%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
            CST  PVDVYGRRL+ D  +  L +A++   ED E+E D   E + + DV  R+  I FFEEAAER Y   L+R +LCAFV GR GEEAMW+VTVKSILQFVPGMRVAIAAEAEGL+AYERSMGGLPGVTVSGTQNPATAAL+AD+YC   + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH GSQGSYHDAQL RR+A+VLGF+APSFT GTDLMLP  AN  LRESLGL H A   Q DG+  +++ALQE V+FDQ SAVPQVLAALAYSR  PGVWF+DP+ WVGQ+LF+EASIW+IPLVKPRYTC IA   L+  SPKTA+VLQS++DFF++GGKCANGLI++
Sbjct: 1112 CSTVMPVDVYGRRLTPDDGSRPLRVAKIFSVEDSEEEADDVEEELANVDVD-REDVISFFEEAAERPYSQDLKRRNLCAFVGGRAGEEAMWDVTVKSILQFVPGMRVAIAAEAEGLDAYERSMGGLPGVTVSGTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSQGSYHDAQLRRRSASVLGFDAPSFTHGTDLMLPVGANEDLRESLGLRHGASL-QHDGDWASMVALQELVEFDQFSAVPQVLAALAYSRDTPGVWFLDPQAWVGQHLFQEASIWNIPLVKPRYTCAIAPAQLEPGSPKTAEVLQSNLDFFSMGGKCANGLIDF 1458          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI39_ECTSI)

HSP 1 Score: 474 bits (1221), Expect = 2.010e-144
Identity = 249/348 (71.55%), Postives = 284/348 (81.61%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
            CST  PVDVYGRRLSA  E+  L +A+M+EAED  +E S        DV  R++AIRFFEEAAER+Y   L+R +LCAFV GR GEEAMWEVTV SILQF+PG+RVAIAAEAEGL+AYERSMGGLPGVT+S TQNPATAAL+AD+YC   + +ILYV+PGSVLSR FT KDTHSPR DLLVV+ GSQGSYHDAQL  R+A+VLGF+APSFT GTDLMLP   N  LRESLGL H A   Q DG+  +LIALQE V FDQVSAVPQVLAALAYSR+ PGVWFVDP+ WVGQNLFKEASIWD+PLVKPRYTC IA   L+  SP TA+VLQS++DFF+ GGKCANGLI++
Sbjct: 1176 CSTVMPVDVYGRRLSASDESDPLRVAKMIEAEDVGEELS-------VDVD-REQAIRFFEEAAERSYSQDLKRHNLCAFVGGRAGEEAMWEVTVNSILQFMPGIRVAIAAEAEGLDAYERSMGGLPGVTISSTQNPATAALFADQYCGPGTALILYVEPGSVLSRPFTSKDTHSPRSDLLVVYTGSQGSYHDAQLRSRSASVLGFDAPSFTHGTDLMLPVGTNEALRESLGLRHGASL-QHDGDGASLIALQELVGFDQVSAVPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYTCAIAPVQLEPGSPNTAEVLQSNLDFFSKGGKCANGLIDF 1514          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4M7_9PHAE)

HSP 1 Score: 455 bits (1171), Expect = 1.350e-143
Identity = 240/347 (69.16%), Postives = 274/347 (78.96%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIE 1046
            CST  PVDVYGRRLSA  E   L +A+M+EAE+   E S        DV  R KAIRFFEEAAER +   L+R +LCAFV GRVGEEAMWEVTVKSILQF+PGMRVAIAAE+EGL+AYERS+GGLPG  +S TQN ATAAL+AD+YC   + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH GS GSYHD+QL  R+A+VLGF+APSFT GTDLMLP   N  LRESLG    A   Q DG+  +LIAL+E V FD+VSA+PQVLAALAYSR+ PGVWFVDP+ WVGQNLFKEASIWD+PLVKPRY C IA   L+  SP TA VLQS++DFF+ GGKCANGLI+
Sbjct:  487 CSTMMPVDVYGRRLSASDEGDPLRVAKMIEAEEVGDEWS-------VDVD-RVKAIRFFEEAAERPFFQDLKRHNLCAFVGGRVGEEAMWEVTVKSILQFMPGMRVAIAAESEGLDAYERSLGGLPGAAISSTQNSATAALFADQYCGAGTALILYVEPGSVLSRPFTSKDTHSPRGDLLVVHTGSPGSYHDSQLRSRSASVLGFDAPSFTHGTDLMLPMGTNQALRESLGFRLGASL-QHDGDGASLIALEELVGFDRVSALPQVLAALAYSRETPGVWFVDPQAWVGQNLFKEASIWDVPLVKPRYMCAIAPAQLEPGSPNTANVLQSNLDFFSKGGKCANGLID 824          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L131_9PHAE)

HSP 1 Score: 414 bits (1065), Expect = 3.500e-129
Identity = 223/355 (62.82%), Postives = 269/355 (75.77%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSG-RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQ----VLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEYA 1052
            CST  PVDV    LS D+E+YSL++ Q ME EDGE+E + SFE +    V G R+  I FFEEAAER +   L+R +LCAFV GRV EEAMWEVTVKSILQF+PGMRVAIAA A+GL+AYERSMGG PGVT+S TQNPATA+L+AD++C   + +ILYV+PGSVLSR FT KDTHSPRGDLLVVH G QGSY + +  RR+  VLG EAPSFT+GTDLMLP  AN  LRESLG+   A   ++DG+  A+ AL E VDF++VS+VPQ    +LAALAY+R  PGVWF DP+ W GQ LF+EASIWDIPL KPR+TC IA   L+  S   A  LQ+++DFF+ GGKC +GLIEY+
Sbjct:  373 CSTVMPVDVRSLWLSIDNEDYSLQIGQAMEGEDGEEEVEGSFERV---GVDGVREGVISFFEEAAERPFFQDLKRGNLCAFVGGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGRPGVTISSTQNPATASLFADRFCGAGTALILYVEPGSVLSRPFTFKDTHSPRGDLLVVHGGGQGSYRNDERSRRSGLVLGLEAPSFTRGTDLMLPVGANKDLRESLGMEMQADSVRRDGDGAAVTALAEPVDFEEVSSVPQARNRMLAALAYARNTPGVWFGDPQVWSGQRLFQEASIWDIPLAKPRFTCAIAL-TLEPDSLHAATTLQNNLDFFSRGGKCEDGLIEYS 723          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI38_ECTSI)

HSP 1 Score: 411 bits (1056), Expect = 1.340e-128
Identity = 223/354 (62.99%), Postives = 269/354 (75.99%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKE-DSSFEPIQDADVSG-RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQ----VLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
            CST  PVDV    LS D E++SL++A  MEAED E+E + SFE +   DV G R+  I FFEE AER +   L+R +LCAFVSGRV EEAMWEVTVKSILQF+PGMRVAIAA A+GL+AYERSMGGLPGVT+S T NPATA+L+AD++C   + +ILYV+ GSVLSR FT KDTHSPRGDLLVVH G QGSY D +  RR+  VLG EAPSFT+GTDL+LP  AN  LR SLG+   A   ++DG   A++AL E  DF++VSAVPQ    +LAALAY+R  PGVWF DP+ WVGQ+LF+EASIWDIPLVKPR+TC IA  AL+    + A  LQ+++DFF+ GGKC +GLIEY
Sbjct:  315 CSTAMPVDVRDLWLSTDSEDHSLQIAHAMEAEDREEEAEGSFERV---DVDGIREGVISFFEEEAERPFFQDLKRGNLCAFVSGRVDEEAMWEVTVKSILQFMPGMRVAIAAGAKGLDAYERSMGGLPGVTISSTHNPATASLFADRFCGAGTALILYVELGSVLSRPFTSKDTHSPRGDLLVVHRGGQGSYRDDERSRRSGLVLGLEAPSFTRGTDLVLPVGANKDLRGSLGMEMHADSVRRDGVGAAVMALTEPADFEEVSAVPQARNRMLAALAYARNTPGVWFGDPKVWVGQHLFQEASIWDIPLVKPRFTCAIAL-ALEPDILRAATTLQNNLDFFSRGGKCEDGLIEY 664          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHL7_9PHAE)

HSP 1 Score: 317 bits (812), Expect = 1.260e-91
Identity = 172/259 (66.41%), Postives = 198/259 (76.45%), Query Frame = 3
Query:    9 CSTKQPVDVYGRRLSADHENYSLELAQMMEAEDGEKEDSSFE-PIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSL-SEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFD 779
            CST  PVDVYGRRL+ D  +  L  A++   ED E+E    E  + + DV  R+  I FFEEAA+R Y   L+R +LCAFVSGRVGEE MWEVTVK ILQF+PGMRVAIAAEAEGL+ YERSMGG PGVTVSGTQN ATA+L+AD+YC   + +ILYVKPGS LSR FT KDTHSPRGDLLVVH G QGSYHDAQL RR+ +VLGF+APSFT GTDLMLP  AN  LRESLGL H A   Q DG+  +++ALQE V+FD
Sbjct:  545 CSTVMPVDVYGRRLTPDDGSRPLREAKIFSVEDSEEEADGVEGELANVDVD-REDVISFFEEAAKRPYSQDLKRRNLCAFVSGRVGEETMWEVTVKIILQFMPGMRVAIAAEAEGLDTYERSMGGRPGVTVSGTQNLATASLFADQYCGAGAALILYVKPGSDLSRFFTSKDTHSPRGDLLVVHTGFQGSYHDAQLRRRSVSVLGFDAPSFTDGTDLMLPVGANEDLRESLGLRHGASL-QHDGDGASMVALQEMVEFD 801          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Imm (upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLE5_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 5.030e-79
Identity = 149/297 (50.17%), Postives = 201/297 (67.68%), Query Frame = 3
Query:  162 RQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYCSLSE--IILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPK-TAQVLQSSVDFFAIGGKCANGLI 1043
            R +  RFFE  + R + + +ER+ +CAFV+G   +    EVTV S+L+FVPGMRV +AAE + ++AYER++GGLPGV+VS TQ+  TA+ +AD+YC ++   +I Y+K GSV+SR+FT KDTHSP+GDLLVV     G  H   L  RTA VLGFEAP FT GTDL+LP  ANA LR +L      +        DA+ A+++  D    +AVPQ+LAAL Y R  PG+WF +P+ WV  +LF+ ASIW+IPLVKPR+TC +  D + SA     A +LQ ++DFFA+GG C  G+I
Sbjct:  405 RVEVSRFFEMESVRPFAEDVERNRVCAFVAGTASQVDQIEVTVSSVLEFVPGMRVVVAAEVDAVDAYERAVGGLPGVSVSSTQSVFTASFFADEYCGVANTTLIYYLKTGSVVSRSFTSKDTHSPQGDLLVVF----GKGHSGDLADRTANVLGFEAPPFTTGTDLILPVGANADLRAALASEKTVN--------DAVGAIEDVFDLGDTAAVPQMLAALQYKRAAPGIWFFNPQEWVTNHLFQTASIWEIPLVKPRFTCEL--DHVSSADESDVADILQRNLDFFAMGGTCERGVI 687          
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGJ2_9PHAE)

HSP 1 Score: 273 bits (698), Expect = 1.570e-75
Identity = 153/328 (46.65%), Postives = 197/328 (60.06%), Query Frame = 3
Query:  147 ADVSGRQKAIRFFEEAAERTYLDGLERSDLCAFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPGVTVSGTQNPATAALYADKYC---SLSEIILYVKPGSVLSRAFTPKDTHSPRGDLLVVHPGSQ-GSYHDAQLVRRTAAVLGFEA------------PSFTQGTDLMLPGDANAYLRESLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPGVWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDS-----------ASPKTAQVLQSSVDFFAIGGKCANGLIEY 1049
            A      K    F +AA+  + + +    LCAF++GR GE   W VTV SI +F PGMRVA+AAE E ++ YER++G LPGVTV+ T +  TA+LYAD+YC   + + +I+YV  GS  SR  T KDTHSPRGDLLV H  S   S+H A L ++TA+VL                PSFT GTDLMLP  ANA LR+            K  +A    A+Q   D D ++AVPQ LAAL YSR+  GVWF+DP+ WV + LFKE SIWDIPLVKPR+TC +    L +           +S + AQVLQ  +DFF+ GG C+NG I++
Sbjct:  480 APTGATDKQALAFAQAAKSPFTEDVAYGSLCAFIAGRAGEVDEWAVTVSSIQKFAPGMRVAVAAEEEAVHLYERAVGPLPGVTVASTPSALTASLYADRYCGGTNSTSLIMYVTRGSTFSRPLTSKDTHSPRGDLLVAHSSSATASHHVAHLAKQTASVLALSEGGAAPPPPLPLPPSFTFGTDLMLPAGANADLRDLFA--------SKGDKATFQQAVQTLADLDDLAAVPQALAALQYSRQPEGVWFLDPQAWVSEYLFKEVSIWDIPLVKPRFTCAVDPALLRNHASAGAARGGRSSFEVAQVLQDGLDFFSKGGTCSNGQIDF 799          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7239.15428.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.190e-17179.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.660e-17178.29protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.170e-14570.77protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.010e-14471.55protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.350e-14369.16protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.500e-12962.82protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.340e-12862.99protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.260e-9166.41protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Imm5.030e-7950.17upregulated 5 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Uncharacterized1.570e-7546.65protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7239contigE_fasciculatus_S2_contig7239:248..3382 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score516.5
Seed ortholog evalue8.7e-144
Seed eggNOG ortholog2880.D7FI37
Model size2699
Hectar predicted targeting categoryother localisation
Exons4
EggNOG OGs2D0G2@1,2SE3H@2759
Cds size969
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7239.15428.1prot_E_fasciculatus_S2_contig7239.15428.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7239 337..1718 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842387.8178535-UTR-E_fasciculatus_S2_contig7239:247..3361696842387.8178535-UTR-E_fasciculatus_S2_contig7239:247..336Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7239 248..336 +
1696842387.859873-UTR-E_fasciculatus_S2_contig7239:1718..23241696842387.859873-UTR-E_fasciculatus_S2_contig7239:1718..2324Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7239 1719..2324 +
1696842387.8704693-UTR-E_fasciculatus_S2_contig7239:2347..33821696842387.8704693-UTR-E_fasciculatus_S2_contig7239:2347..3382Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7239 2348..3382 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842387.8297198-CDS-E_fasciculatus_S2_contig7239:336..6141696842387.8297198-CDS-E_fasciculatus_S2_contig7239:336..614Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7239 337..614 +
1696842387.8395212-CDS-E_fasciculatus_S2_contig7239:832..12651696842387.8395212-CDS-E_fasciculatus_S2_contig7239:832..1265Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7239 833..1265 +
1696842387.8497212-CDS-E_fasciculatus_S2_contig7239:1460..17181696842387.8497212-CDS-E_fasciculatus_S2_contig7239:1460..1718Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7239 1461..1718 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7239.15428.1

>prot_E_fasciculatus_S2_contig7239.15428.1 ID=prot_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=323bp
MMEAEDGEKEDSSFEPIQDADVSGRQKAIRFFEEAAERTYLDGLERSDLC
AFVSGRVGEEAMWEVTVKSILQFVPGMRVAIAAEAEGLNAYERSMGGLPG
VTVSGTQNPATAALYADKYCSLSEIILYVKPGSVLSRAFTPKDTHSPRGD
LLVVHPGSQGSYHDAQLVRRTAAVLGFEAPSFTQGTDLMLPGDANAYLRE
SLGLGHDAHRPQKDGEADALIALQEFVDFDQVSAVPQVLAALAYSRKMPG
VWFVDPRGWVGQNLFKEASIWDIPLVKPRYTCTIASDALDSASPKTAQVL
QSSVDFFAIGGKCANGLIEYAA*
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mRNA from alignment at E_fasciculatus_S2_contig7239:248..3382+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7239.15428.1 ID=mRNA_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3135bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7239:248..3382+ (Ectocarpus fasciculatus EfasUO2)
CCAACAGGTGCTCGACCAAGCAGCCGGTGGACGTGTACGGGCGCCGCCTG TCCGCGGACCATGAGAACTACTCTCTCGAGCTCGCGCAGATGATGGAAGC GGAGGACGGCGAGAAGGAGGACAGCAGCTTCGAGCCTATTCAGGACGCCG ACGTTTCTGGCAGGCAGAAGGCCATCCGCTTCTTCGAGGAGGCAGCCGAG CGGACTTACCTCGACGGGTTGGAGCGCAGCGACCTGTGCGCCTTCGTCAG TGGTCGGGTCGGCGAGGAGGCCATGTGGGAGGTGACGGTGAAGAGCATCC TGCAGTTCGTGCCGGGCATGAGGGTGGCCATCGCTGCTGAGGCGGAGGGA CTCAACGCATACGAGAGGTATGTACGGGTGTGGGTTGTGTGAAGAGCTAT GTAGAATATCTAGTCTTTACGATACCGTACGCTCTCGCGTTCCCCACACA TCGTGGTTGCTTGGTGTTTCTGCGTGCTTGAATCGTGAAGCGGCGTCCGC GAGACTTGTCGCCGCGTCTCGCGTTCGAAAGCACGCCTCTTGACGTCCAT CTCTTTTTGCTCCGTTTCCTTGCCGATAATTCTAGGTCTATGGGCGGTCT CCCCGGTGTCACCGTCTCCGGCACCCAGAACCCCGCCACAGCGGCCCTGT ACGCGGACAAGTACTGCTCTCTCAGCGAAATTATCTTGTACGTCAAGCCG GGTTCCGTTCTCTCCCGGGCATTCACGCCCAAGGACACGCACTCCCCTCG TGGCGACCTCCTGGTCGTGCACCCGGGCTCTCAGGGGAGCTACCACGACG CACAGCTTGTCCGCCGCACGGCGGCGGTCCTTGGTTTCGAGGCGCCGTCC TTCACCCAAGGCACCGACCTGATGCTGCCGGGAGATGCAAATGCCTATCT TCGGGAGTCGCTTGGACTGGGGCATGATGCCCACCGCCCGCAGAAAGACG GCGAGGCGGATGCGCTGATCGCGCTCCAGGAGTTCGTAGACTTCGACCAA GTCTCCGCCGTCCCTCAGGTACGACGTCTGTCTTCGGGTGTGCGTAAAAT TGTCGTGGCCATCGTTTTTTCTCTCGAGGTCTATTTCTGTTTTCTTTGTG CAGGTTATCTGCACATGCACCTATCGGTCATGCTAGACCTATTGCTTTCA ACCCGAACGACGCCACTTATATACCCGGTTTTGTTGCAATACGACCATTG TTCCACGTTACAGGTGCTTGCCGCGCTCGCCTACTCCCGCAAGATGCCCG GAGTGTGGTTCGTTGACCCCCGTGGTTGGGTGGGTCAGAACCTCTTCAAG GAGGCGTCAATCTGGGACATCCCCCTTGTCAAGCCCCGCTATACCTGCAC CATCGCCTCGGACGCGCTGGACTCCGCAAGCCCCAAGACTGCCCAAGTCT TGCAAAGCAGCGTGGACTTCTTTGCGATCGGCGGCAAGTGCGCCAACGGC CTGATCGAATACGCGGCGTAGGCTGGAAACGTTCGCCTTGGCAGCCAAGT TGTTTCCGTGGCGTGTTTTCGCTGACCCGTTCATACAATAGTCGTTTGTA TCTCTCTCGCGCGTGTACGTACATGGTGGCGGCCCTTACTCGATCTAGGT TTGATCGAAATATCACACCGACTTGTTTTTACTGTAATCGTCTACGTTGG CAGGGTCATATTTAATTTTAGGTTAATTTACACCAGCGCCACCTTGGCTC TCCGAGCGGGCTCGTGTTCGAGGGTAGATTCTTGGCCCGTTTTATGTTGA ACGCCTAGTTTCTATTGCCTGTTCAAGTTCCTATGAATGTGCGACGTATT GAGATAGTACCATCAAGTAGCGTACATGCGGCACTTCCACGCCGCACATG GTTCCTTCTCCCGCCCAGCGATAGTGGTGAACGCTACCGTCGGGATACCT GAGCGGTCCGTCATGGAAGATCGCCAGTTTAACGGGAGGGGCAAAAGATT TGTGCTCCGTTTTATTGTTCTGTTGGTTTCCGACCGGGCAACCTGCCGGT GTATGTTTGCCGGTGTTAGTGGATGTTAATGTGTCCTCGATTAGTCAGAG GCCAGTCTGTGTGTGTCTGTTGTTTCTGTTTGAGCTCTGTAGCCACGGAG TTGCCCTCAAGTAGGGACAACAACTGAAGATACTTGTATGACAGTTGTTG TCCGTAGGCAGTATTTTTTTTTTTCGATCGTGAGGCAGCTCTTGTAGCTA TCGAACGTGGCTGCGTTTGTCGGTTCCCTTGTTACTTACCAAGCCGACAT TTTGTGTGCGAAACCCACAGCGTTCTTTCCGTAATATTTTTATTAGACAG GTCGTGTATCAGTAGATGCGAAAAGTTTTGGTTAGCTGTGAGGTTCAAGC TGCTGAGGTTGTGGGCTCTGTCTGTCCGTAGGGCGTGCGCACCCCTGAAC TTTTTGCCCAACTTGTTGACTTGGTGGAGAGCTACGTACCTGTTTTCATA GGCTTTAGATCAGCCCTAGTCTAAATGTTGTGTAATTTTGAGGCTGACAT CGCCGGCATTCATTCGTTAAACTTACATTTTTACCTTTTTTCCAACATTC CCCAAGGCTCTCGGTTCTTTTTCCCGCATACCTCGGCCCGCATTGATGGG TTGCACACGACTATTCACTCGTTGCGGGATTAGTGCCAGGCAGGACCACA ATTGATGGCGTTGGACAAACTTCGTGTCTTTCCTGGAGCTCGACACGAAC GAGAAAATTAGGATGCTGGGCCAGCCCATACGCCTTTTTTATGCGGGAGG CTGGATCGTGATCTTTCGACGATGAAGCGTGCGTGTCAACTACATGTTTC GTGTAATGAGGGGGTGTACGTAGGAGCCCGCATTCCGTAGGCGTGGCGGA GTGTAAATATTCAAGCACTATCACGAGATTTTGTTTTCAAAATGTACCGA GAGAGCGAACCACGCACTGTGCACCAGGTGCGTGCATTATGTGTTACGTC GACTCTCCTCACTCTACACTCTTCCTGCTGCTGCTGCTGCTGCTGCTGCT GCTGCTGTAGATGATTTGATTCATTTCGGGTCAATCAACAAGCTCCTATC TAGAAGTGAATTTCGGACTCACTCCCGATTTCACTCGGTCGGGCGTGAAT ACTCACGAGTCTCGTGGTTGCGTAAGAACCGCCAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7239:248..3382+

>mRNA_E_fasciculatus_S2_contig7239.15428.1 ID=mRNA_E_fasciculatus_S2_contig7239.15428.1|Name=mRNA_E_fasciculatus_S2_contig7239.15428.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=969bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7239:248..3382+ (Ectocarpus fasciculatus EfasUO2)
ATGATGGAAGCGGAGGACGGCGAGAAGGAGGACAGCAGCTTCGAGCCTAT
TCAGGACGCCGACGTTTCTGGCAGGCAGAAGGCCATCCGCTTCTTCGAGG
AGGCAGCCGAGCGGACTTACCTCGACGGGTTGGAGCGCAGCGACCTGTGC
GCCTTCGTCAGTGGTCGGGTCGGCGAGGAGGCCATGTGGGAGGTGACGGT
GAAGAGCATCCTGCAGTTCGTGCCGGGCATGAGGGTGGCCATCGCTGCTG
AGGCGGAGGGACTCAACGCATACGAGAGGTCTATGGGCGGTCTCCCCGGT
GTCACCGTCTCCGGCACCCAGAACCCCGCCACAGCGGCCCTGTACGCGGA
CAAGTACTGCTCTCTCAGCGAAATTATCTTGTACGTCAAGCCGGGTTCCG
TTCTCTCCCGGGCATTCACGCCCAAGGACACGCACTCCCCTCGTGGCGAC
CTCCTGGTCGTGCACCCGGGCTCTCAGGGGAGCTACCACGACGCACAGCT
TGTCCGCCGCACGGCGGCGGTCCTTGGTTTCGAGGCGCCGTCCTTCACCC
AAGGCACCGACCTGATGCTGCCGGGAGATGCAAATGCCTATCTTCGGGAG
TCGCTTGGACTGGGGCATGATGCCCACCGCCCGCAGAAAGACGGCGAGGC
GGATGCGCTGATCGCGCTCCAGGAGTTCGTAGACTTCGACCAAGTCTCCG
CCGTCCCTCAGGTGCTTGCCGCGCTCGCCTACTCCCGCAAGATGCCCGGA
GTGTGGTTCGTTGACCCCCGTGGTTGGGTGGGTCAGAACCTCTTCAAGGA
GGCGTCAATCTGGGACATCCCCCTTGTCAAGCCCCGCTATACCTGCACCA
TCGCCTCGGACGCGCTGGACTCCGCAAGCCCCAAGACTGCCCAAGTCTTG
CAAAGCAGCGTGGACTTCTTTGCGATCGGCGGCAAGTGCGCCAACGGCCT
GATCGAATACGCGGCGTAG
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