mRNA_E_fasciculatus_S2_contig7236.15423.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7236.15423.1
Unique NamemRNA_E_fasciculatus_S2_contig7236.15423.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP09_ECTSI)

HSP 1 Score: 855 bits (2210), Expect = 3.790e-305
Identity = 467/501 (93.21%), Postives = 481/501 (96.01%), Query Frame = 1
Query:    1 MVAAAELDSMWVVGFVEDARRHQKDMLLRDLRDFVRLPGSTVLPGAHAALAAISLMGQPTSFNSTPLPDSKARAGSSASAXAGGHDRHGAGDGDDDSGDLYGGAAAKFRPSAGKNALTDLECLRLRELEKRLSQESLGVKDEDVRHHAGVQAYGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVRRELWILRQR 1503
            MVAAAELDSMWVVGFVEDARRHQKDMLLRDLRDFVRLPGSTVLPGAHAALAAISLMGQPTSFNSTP PDS+A+A SS+S  A GHDR GA DGDDDSG+LYG AAAKFR SAGKNALTDLECLRLRELE RLSQESLGVKD DVRHHAGVQAYGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQ+LYKHY+RRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALE+ AAS+IQAAARARAGRQRA ATKV+LAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRV+GRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSM RRRDFLRVLAAEEEWERENMEI+QRRSRRMMLEE+LEAA EAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQV R  W+  +R
Sbjct:    1 MVAAAELDSMWVVGFVEDARRHQKDMLLRDLRDFVRLPGSTVLPGAHAALAAISLMGQPTSFNSTPPPDSRAKAVSSSSPAAEGHDRRGADDGDDDSGNLYGSAAAKFRSSAGKNALTDLECLRLRELETRLSQESLGVKDADVRHHAGVQAYGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQQLYKHYFRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALEQGAASKIQAAARARAGRQRAHATKVDLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVIGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMERRRDFLRVLAAEEEWERENMEIKQRRSRRMMLEEKLEAAAEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVERRDWLFSER 501          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT23_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.000e-43
Identity = 143/408 (35.05%), Postives = 204/408 (50.00%), Query Frame = 1
Query:  433 RHHAGVQAYGAANRKLRKILGGARPPFMGPAIKSEGL--------------EAVFQRNREERA--------------AATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLAR-----------------RFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRR---------------------------DFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNE--------------QELKTQRMMLSPRALQQGWKEELDSNIGQHK 1398
            R  +G +AY   NRK+R + GGA    +       G+              +A+F+R R ERA              AA R+QR ++HY  R+RF  MT Q+  VV+IQ  ARG +A                  R VAEW+ARR+ MV+ WQ++IRR LSN+R RRR+A ERRA + IQAAAR    R R +A     AAL IQ  WRG++ RAR DR WL    T +Q   R ++A++ V   RR ++ AA ++QR++RG  AR      +W R   R +                           ++LRVL+AEEE    + ++++RR  ++ L     AA   E+ A   +  L                  + ++ QR +LSPRALQQGW+EEL++N+ QH+
Sbjct:  253 RRRSGARAYRLVNRKMRTVRGGAGAVALAVRAGPSGVLRCQQLDTLFDQQPDALFKRTRRERAQLXXXXXXXXXXXXAAMRLQRWWRHYSVRRRFEVMTRQMLLVVRIQVPARGDIAXXXXXXXXXXXXXXXXXXRLVAEWHARRTHMVVGWQSLIRRGLSNLRLRRRIAAERRACTIIQAAARGWWERLRLKALTRERAALTIQRSWRGALGRARADRRWLDTQVTLMQTAARGLLARKAVAVIRRRQHAAATTLQRSYRGFRARAQRFDAMWTREANRTKAXXXXXXXXXXXXXXXXXXXSHLLQQGEWLRVLSAEEEHLMADYDVQKRRFDKLQLGAAAAAAATRESDARERIRTLNERXXXXXXXXXXXXETVEGMRLQRQLLSPRALQQGWREELETNLEQHR 660          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Hypothetical (protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H2L1_9STRA)

HSP 1 Score: 150 bits (380), Expect = 1.680e-35
Identity = 127/385 (32.99%), Postives = 194/385 (50.39%), Query Frame = 1
Query:  340 KNALTDLECLRLRELEKRLSQESLGVKDEDVRHHAGVQAYGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVRRELWIL 1494
            K++LT  E  RL+EL++ L      V     +   G   Y   NR+LR++L G +P         + +  +F+R R+E+ AA  +Q+ +K Y     +R    Q+  + +IQAL RGVL RR VAEW+  R  +++ WQ  IRR L  +  R    +    A+  Q+  R   GR RA   K  LA  RIQCLWRG+  RA  DRLWL   A++IQ L+R  +A+RV+   +  R+  A  IQ  +RG  AR     L++ R  + R + +  + A+  W  + +E   R   R  L +++ A           + E E N ++  T R  LSPRA  QGW+ ELD  +   +  +   +L+ +F A L   +L+E+  R   +L
Sbjct:    2 KSSLTVEERQRLKELQRMLEDRPTQVGPRGGKL-TGASVYQRENRRLRRVLEGGKPRL----DHDDHMTPMFERMRQEQEAARTLQKTWKRYVILTFWRTRLNQIYLIKRIQALWRGVLGRRRVAEWFHERRRLIVLWQARIRRHLDVVHLRADEVIWNACATMCQSVIRGYLGRGRAWFLKQTLAVSRIQCLWRGATGRAVADRLWLNGQASKIQRLMRGELARRVMKAEKSERSRQAFKIQNVWRGFFARLTRNRLLYERETSYRHNTVTEIQADVSWWTDELERLARNMNRKQLPQQIAAKDSRLKELSQLIREEEFNLEDAVTDRAGLSPRAAAQGWESELDERVVATEVLLKGYRLDFLFGARLDQAKLQEEFHRRQGVL 381          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SZG3_9ARCH)

HSP 1 Score: 135 bits (340), Expect = 3.870e-30
Identity = 104/309 (33.66%), Postives = 161/309 (52.10%), Query Frame = 1
Query:  541 LEAVFQRNREERAAATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEE 1467
            L   ++  R E  A  R+Q+ ++   R + +R+    +  VVKIQ + RG +ARRFVA W+  R+   + WQ+ +R+ LSN+  R R   ER+ A+ IQ  AR    R R  +   NLAA RIQ LWRG VDR   DRLWL      IQ      VAK        + N AA  IQR FR  +A + +  ++  R M  R   +R+L AEEE+  + +     R  +  + E+ + ++ +       +FE E+   E K Q  ++SPRA++QG++++L       ++ IT+ K   +F+ S+   E +E
Sbjct:   40 LHEFYELQRRENKAVLRLQQFWRKIRRVRAWRKAVHAMFCVVKIQKIIRGWVARRFVARWFIVRNRTAIIWQSTVRKHLSNVHLRPRQMYERKMATHIQCCARRMIARHRVVSVLRNLAATRIQALWRGVVDRVLADRLWLDNKVIPIQXXXXXXVAKNKFSGHHNVLNQAALLIQRKFRTILAARKVGNILHEREMRYRMSLIRMLTAEEEYFIQRINRLMSRVIKNEVREKAQQSLVSIQQQEKLIFEKENEFIETKRQAEIVSPRAIEQGFRDQLLQTADTVRKEITQLKCAHLFDLSMAMHENDE 348          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: IQGAP (protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XVI8_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.070e-28
Identity = 104/301 (34.55%), Postives = 162/301 (53.82%), Query Frame = 1
Query:  583 ATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIR----WRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQV 1473
            A ++Q+ ++ +  R+ +R    Q++ VV+IQ +ARG L RR+V  W+A R++ V   Q + R      +    W+R   L    A +IQ+  R    ++  R  K  +AAL IQ LWRG   R   D LWL A AT +Q LVR  +A++   R       +A  IQR FRG  AR  +  ++  R    R++F+ +L AEEEW R   +  Q R  R  L +R+          H  + ++ES   +++TQRM +SPRA++ GW EE+++ + Q +  ITK KLE VF   L  ++ E+++
Sbjct:   77 ARKLQKWWRGHLLRQFWRLHFRQVKAVVQIQRVARGYLTRRWVCIWHANRTIRVTRLQALFRGYYIRYKVIPTWKRWENLN---AVKIQSIIRMYFAKECCRRYKEEIAALHIQILWRGYYSRKWSDILWLDAKATNLQRLVRGTLARKHTRRRVVRLQSSAIQIQRMFRGMKARMEINIVLRDRETVNRKEFMAMLDAEEEWHRAQRDKLQARLNRKQLRQRVAQLEYDYYTKHEEIHDMESIYLDMQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKLKLETVFGLGLEFKQKEKEL 374          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MYQ5_PHYIT)

HSP 1 Score: 125 bits (314), Expect = 6.280e-27
Identity = 101/290 (34.83%), Postives = 155/290 (53.45%), Query Frame = 1
Query:  580 AATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIR----RMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAK-RVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVF 1434
            AA ++Q+ ++ +  R   +    Q++ +++IQ  ARG L R++V  W+A RS+ V   Q + R    R    + WRR   L    AS+IQ+  R    ++  +  K  +A L IQ +WRG   R + D  WL   A  +Q L R  +A+     R  R+RNGA + IQR FRG  AR  +  L+  R    R++FL +L  EEEW R   +  Q R  R  L+ER+          H  + ++ES   +++TQRM +SPRA++ GW EE+++ + Q +  ITK K+E VF
Sbjct:  150 AARKLQKWWQGHLHRVFLQLHFKQVKAILQIQRFARGFLTRQWVRIWHANRSIRVTRLQALFRGYFIRSQVILTWRRWEYLN---ASKIQSIIRMYLAKEFCQRCKREVAVLHIQSVWRGFSSRKKSDMRWLELRAINLQRLARGTLARMNARKRATRLRNGAIQ-IQRMFRGMKARTEIKTLLRDRETRNRQEFLAMLEVEEEWHRAQRDKLQSRLNRQQLKERVAQLEYDYYIKHEQIHDMESIYLDMQTQRMRVSPRAIEHGWVEEMEAKMKQQRVLITKLKIETVF 435          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4EB44_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.080e-26
Identity = 103/340 (30.29%), Postives = 172/340 (50.59%), Query Frame = 1
Query:  457 YGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVR 1476
            Y  ANR LR+ +   +P  +  ++    +     R REE  A   I R ++ + +R+R  +   Q + VV +QA  RGV+AR+ VA WY +  ++ + WQ  IRR L  +  +RR   ERR    I +A R   G+ R R  + +  A  IQ LWRGS  R   DR WL ++   IQ   R M ++    + R     A   I R +RG   R+     ++ R     RD L +L +E +  ++  +  ++R  +  L  + +AA +   +    V  +E+    L  ++  L+PRA+  G+++E+D+NI ++++ +TK K E +F A +  R LE ++R
Sbjct:  219 YERANRSLRRAIRKRKPRRVVASLSVAHVGDAVDRYREEARAQRVIGRAFRIFVKRRRLERRLEQNRVVVSLQAAMRGVIARKLVAVWYRKLVIVTIKWQARIRRALCQLHLKRRWIHERRLYVVIHSAVRMFLGKCRVRRRRFDTCARHIQSLWRGSRARCVADRTWLESVVIPIQKQARGMRSRSRYAKIREEVYAATLRISRCYRGYSGRRDRNKALYERESGDLRDLLALLGSEAQAMQDRAKRTEKRITKKNLRAKRDAAKDRVDSLADEVITMEARYLLLIQEKERLTPRAISGGYRDEMDANISEYRQIVTKLKTELLFGALVDLRALEGEIR 558          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Aste57867_21175 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LGY2_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.260e-26
Identity = 111/338 (32.84%), Postives = 164/338 (48.52%), Query Frame = 1
Query:  442 AGVQAYGAANRKLRKILG--GARPPFMGPAIKSEGLEAVFQRNREERAAATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVR-VMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASL 1446
            A   AY A NR+L  +L    A+PP      K   +  +       + +A  +QR ++ + +R  +++    +     IQ   RGVL R++VA W   R   V   Q + R  L+      ++  E+  A+ IQ   R   GR+RA   +  +AAL IQCLWRG   R R DRLWLGA  TR+Q L R   V K  +    R  + A  +IQ+ FRGT+AR  +  ++  R    R+  + VL AE  W +E ME  QRR  +  LE R+          H  V +LE    ++  Q+  +SPRA+  GW  E++  + + +  IT  K +AVF   L
Sbjct:   68 ARASAYLAENRRLDTLLRRKNAQPPVKKKTKKPRIMHDMIALEYRYQKSAKVVQRAWRRFSQRTFWQRYFATVHAATVIQRRIRGVLCRKYVAVWVRSRLRFVSKIQAVYRGHLTRRILATKIEWEQYNANVIQRWTRGFFGRRRAVVARQTMAALHIQCLWRGFHSRKRSDRLWLGAKVTRLQSLSRGYFVRKHTLAMAARYHDAAV-AIQKMFRGTLARTRVDDILRDRETHNRKVVMDVLDAEIGWHKEYMEKLQRRLAKTKLETRVVDLEGDLYRLHQQVGDLECIYLDMMEQKAKMSPRAITDGWVSEMEDKMTKQRAMITAAKFDAVFGTGL 404          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2Q8_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.550e-25
Identity = 100/303 (33.00%), Postives = 159/303 (52.48%), Query Frame = 1
Query:  580 AATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIR----WRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVA-KRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQV 1473
            AA ++Q+ ++ Y  R+ +R    Q++  V IQ + RG L RR+V  W+  RS+ V   Q + R      +    W+R   +    A++IQ+  R    ++  R  K  +AAL IQ +WRG   R + D  WL      +Q LVR  +A K    R  R+R+GA + IQR FRG   R+ +  L+  R    R++ + +L AEEEW R   +  Q R  R  L +R+          H  + ++ES   +++TQRM +SPRA++ GW EE++  + Q +  ITK KLE +F   L  ++ E+++
Sbjct:   88 AARKLQKWWRGYLHRQFWRLYFKQVKAAVHIQGVVRGYLTRRWVRVWHVNRSIRVTRLQALFRGYYIRYKVIPTWKRWEHIN---ATKIQSIVRMYFAKKCWRRYKEEIAALHIQIVWRGYSSRKQSDIRWLAVKTINLQRLVRGTLARKHTRRRAARLRSGAIQ-IQRMFRGMKTRQEINLLLRDRETINRQEVMAMLEAEEEWHRLQRDKLQARLNRKQLWQRVAQLEYDYYTKHEEIHDMESIYLDMQTQRMRVSPRAIEHGWVEEMEVKMKQQRALITKLKLETIFGLGLEFKQKEKEL 386          
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YIW8_PHYSP)

HSP 1 Score: 115 bits (287), Expect = 1.720e-23
Identity = 95/301 (31.56%), Postives = 152/301 (50.50%), Query Frame = 1
Query:  583 ATRIQRLYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLAWQNIIRRMLSNIR----WRRRLALERRAASRIQAAARARAGRQRARATKVNLAALRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNGAARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEIRQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRALQQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQV 1473
            A R+Q+ ++ +  R+ +R    Q++  V+IQ +ARG L RR+V  W+A R++ V   Q + R      +    W+R   +    A++IQ+  R    ++  R  K  +AAL IQ  WRG   R R D  WL A A  +Q LVR  +A++   R                    AR  +  L+  R    R++F+ VL AEEEW R   +  Q R  R  L++R+          H  + ++ES   +++TQRM +SPRA++ GW EE+++ + Q +  ITK KL+ VF   L  +  E+++
Sbjct:  151 ARRLQKWWRDHLHRQFWRVYFRQVKAAVQIQRIARGFLTRRWVRIWHANRTIRVTRLQTLFRGYYIRYKVVSTWKRWEYIN---AAKIQSIIRMYFAKKFCRHYKREIAALHIQSAWRGFASRKRSDIRWLEARAINLQRLVRGTLARKFTRRRAARLESGXXXXXXXXXXMKARMEINTLLRDRETRNRQEFMAVLEAEEEWHRIQRDKLQARLNRKQLQQRIAQLEFDYFTQHEHIHDMESIYLDMQTQRMRVSPRAIEHGWVEEMEAKMKQQRALITKLKLDTVFGLGLEFKRKEKEL 448          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7236.15423.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
Uncharacterized3.790e-30593.21protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LP09... [more]
Uncharacterized1.000e-4335.05protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.680e-3532.99protein n=2 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized3.870e-3033.66protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
IQGAP1.070e-2834.55protein n=1 Tax=Phytophthora palmivora var. palmiv... [more]
Uncharacterized6.280e-2734.83protein n=2 Tax=Phytophthora infestans TaxID=4787 ... [more]
Hypothetical1.080e-2630.29protein (Fragment) n=2 Tax=Pelagomonas calceolata ... [more]
Aste57867_211753.260e-2632.84protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized2.550e-2533.00protein n=1 Tax=Phytophthora megakarya TaxID=4795 ... [more]
Uncharacterized1.720e-2331.56protein n=1 Tax=Phytophthora sojae (strain P6497) ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7236contigE_fasciculatus_S2_contig7236:149..2235 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score862.1
Seed ortholog evalue1.3e-247
Seed eggNOG ortholog2880.D8LP09
Model size1503
Hectar predicted targeting categoryother localisation
Exons2
EggNOG OGs28PRS@1,2QWE8@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_007030.1
Cds size1503
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842387.463495-CDS-E_fasciculatus_S2_contig7236:148..3551696842387.463495-CDS-E_fasciculatus_S2_contig7236:148..355Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7236 149..355 -
1696842387.4776878-CDS-E_fasciculatus_S2_contig7236:939..22351696842387.4776878-CDS-E_fasciculatus_S2_contig7236:939..2235Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7236 940..2235 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7236.15423.1prot_E_fasciculatus_S2_contig7236.15423.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7236 149..2235 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7236.15423.1

>prot_E_fasciculatus_S2_contig7236.15423.1 ID=prot_E_fasciculatus_S2_contig7236.15423.1|Name=mRNA_E_fasciculatus_S2_contig7236.15423.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=501bp
MVAAAELDSMWVVGFVEDARRHQKDMLLRDLRDFVRLPGSTVLPGAHAAL
AAISLMGQPTSFNSTPLPDSKARAGSSASAAAGGHDRHGAGDGDDDSGDL
YGGAAAKFRPSAGKNALTDLECLRLRELEKRLSQESLGVKDEDVRHHAGV
QAYGAANRKLRKILGGARPPFMGPAIKSEGLEAVFQRNREERAAATRIQR
LYKHYYRRKRFRQMTLQLQGVVKIQALARGVLARRFVAEWYARRSVMVLA
WQNIIRRMLSNIRWRRRLALERRAASRIQAAARARAGRQRARATKVNLAA
LRIQCLWRGSVDRARVDRLWLGALATRIQGLVRVMVAKRVVGRTRRIRNG
AARSIQRNFRGTVARKVMVGLIWARSMARRRDFLRVLAAEEEWERENMEI
RQRRSRRMMLEERLEAAVEAEAAAHAAVFELESNEQELKTQRMMLSPRAL
QQGWKEELDSNIGQHKEWITKRKLEAVFEASLPARELEEQVRRELWILRQ
R
back to top

mRNA from alignment at E_fasciculatus_S2_contig7236:149..2235-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7236.15423.1 ID=mRNA_E_fasciculatus_S2_contig7236.15423.1|Name=mRNA_E_fasciculatus_S2_contig7236.15423.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2087bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7236:149..2235- (Ectocarpus fasciculatus EfasUO2)
ATGGTGGCGGCGGCCGAGCTCGACAGCATGTGGGTAGTGGGGTTCGTCGA GGACGCCCGGCGGCACCAGAAAGACATGCTCTTGCGAGACCTTCGAGACT TCGTGCGCCTCCCGGGGTCCACCGTGCTCCCCGGGGCGCACGCAGCGCTC GCCGCCATCAGCTTGATGGGACAGCCGACGAGCTTCAACTCTACTCCTCT TCCAGATTCTAAAGCAAGGGCGGGGTCATCGGCCTCAGCGGCAGCCGGAG GCCACGACAGACATGGAGCGGGTGATGGTGACGACGACAGCGGCGACCTC TACGGGGGCGCTGCAGCGAAGTTCAGGCCATCCGCAGGGAAGAACGCGCT GACCGACCTCGAGTGCCTGCGGCTGCGCGAGCTAGAAAAGAGACTTTCCC AAGAATCGCTGGGGGTCAAGGACGAGGACGTGCGCCACCACGCGGGGGTC CAGGCCTACGGAGCCGCCAACCGCAAGCTGCGCAAAATCCTGGGTGGCGC CCGTCCCCCCTTCATGGGGCCGGCGATAAAGAGCGAGGGCCTAGAGGCGG TGTTCCAGCGGAACCGAGAGGAGCGCGCCGCCGCCACGCGCATCCAGCGG CTGTACAAGCACTACTACCGACGCAAACGCTTCCGACAGATGACGCTGCA GCTGCAGGGCGTCGTCAAGATCCAGGCCCTGGCCCGGGGCGTCCTCGCGC GCAGGTTCGTGGCCGAATGGTACGCCCGTCGGAGCGTCATGGTCCTCGCC TGGCAGAACATCATCCGGCGCATGCTGAGCAACATCCGGTGGAGGCGCCG CCTCGCCCTGGAGCGGAGAGCGGCCTCCAGGATCCAGGCGGCGGCGAGGG CGCGGGCCGGGCGCCAAAGGGCCCGCGCCACCAAGGTCAATCTCGCGGCG CTCCGCATCCAGTGCCTCTGGCGAGGTTCCGTCGACCGGGCGAGGGTGGA CCGCCTCTGGCTCGGCGCCTTGGCCACCAGGATACAGGGACTCGTGCGCG TGATGGTGGCAAAGAGGGTGGTCGGGCGCACACGGCGCATCCGCAACGGG GCGGCGCGGTCGATCCAGCGGAACTTCCGGGGGACCGTGGCGAGGAAGGT CATGGTCGGGCTGATCTGGGCGCGCAGCATGGCTCGCAGGAGGGACTTCC TGAGGGTGCTCGCGGCGGAGGAGGAGTGGGAGAGGGAGAACATGGAGATC AGGCAGCGGAGGTCGCGCAGGATGATGCTGGAGGAGAGGCTGGAGGCCGC CGTGGAGGCCGAGGCGGCGGCCCACGCCGCAGTCTTCGAGCTTGAGGTGC GTTTTGGTTTTGCTTCACAGGTGACGAGTGATCAGGGGGGTAAGGACGGC TAAGTACCACGGCTTGATTTGCGCGACGTACGCGGCGCACCCACTAAGAT TAAAGCAGCATTCGTTGTTAGAGGAATGAGTTTTTTAACCGGTAGGTGTA CATTTTGTGCGTACTTGTTGGGTGTAAACCGATCGCCAGAGGCTTTTGAC TCAATCAAGCACGTGTCACGTACCGACGTTTGTCTTGTGGAGGGCCGCGC TTTATCAGAATCGTTCAGCGCGGCTGTCTTCGTAGGCTGTCGAGGGGACC ATGCCTTTCGATGCATCGAGTATAAAAAACGATGTCAGCTGCAGGACGGA CATGGTCAAGGTTGACTGGTACAGCTATTTGCGTGTTCGACATCGACTGC CTCGAACAGTCTCCCTCCCTCGACGAACAGACCTGCCACAAACACCGCAG AAAAATATGCGCACGCCAAACGCCAACCCCCCCGCCCCTCACCTTGACAA ACGCAACACTCTACCGCCACTTCTCCTCCTTTACCAACCATCTGCTGCCC TTCCCCACAACCCTACCATCCTTCAATCAGAGCAACGAGCAGGAGCTCAA GACGCAGAGGATGATGCTGAGCCCTCGGGCCCTGCAGCAGGGCTGGAAGG AGGAGCTGGACAGCAACATCGGGCAGCACAAGGAGTGGATCACGAAGCGG AAGCTCGAGGCGGTGTTCGAGGCAAGCCTTCCTGCGCGAGAGCTCGAGGA GCAGGTAAGAAGAGAGCTGTGGATCTTGCGGCAACGG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7236:149..2235-

>mRNA_E_fasciculatus_S2_contig7236.15423.1 ID=mRNA_E_fasciculatus_S2_contig7236.15423.1|Name=mRNA_E_fasciculatus_S2_contig7236.15423.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1503bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7236:149..2235- (Ectocarpus fasciculatus EfasUO2)
ATGGTGGCGGCGGCCGAGCTCGACAGCATGTGGGTAGTGGGGTTCGTCGA
GGACGCCCGGCGGCACCAGAAAGACATGCTCTTGCGAGACCTTCGAGACT
TCGTGCGCCTCCCGGGGTCCACCGTGCTCCCCGGGGCGCACGCAGCGCTC
GCCGCCATCAGCTTGATGGGACAGCCGACGAGCTTCAACTCTACTCCTCT
TCCAGATTCTAAAGCAAGGGCGGGGTCATCGGCCTCAGCGGCAGCCGGAG
GCCACGACAGACATGGAGCGGGTGATGGTGACGACGACAGCGGCGACCTC
TACGGGGGCGCTGCAGCGAAGTTCAGGCCATCCGCAGGGAAGAACGCGCT
GACCGACCTCGAGTGCCTGCGGCTGCGCGAGCTAGAAAAGAGACTTTCCC
AAGAATCGCTGGGGGTCAAGGACGAGGACGTGCGCCACCACGCGGGGGTC
CAGGCCTACGGAGCCGCCAACCGCAAGCTGCGCAAAATCCTGGGTGGCGC
CCGTCCCCCCTTCATGGGGCCGGCGATAAAGAGCGAGGGCCTAGAGGCGG
TGTTCCAGCGGAACCGAGAGGAGCGCGCCGCCGCCACGCGCATCCAGCGG
CTGTACAAGCACTACTACCGACGCAAACGCTTCCGACAGATGACGCTGCA
GCTGCAGGGCGTCGTCAAGATCCAGGCCCTGGCCCGGGGCGTCCTCGCGC
GCAGGTTCGTGGCCGAATGGTACGCCCGTCGGAGCGTCATGGTCCTCGCC
TGGCAGAACATCATCCGGCGCATGCTGAGCAACATCCGGTGGAGGCGCCG
CCTCGCCCTGGAGCGGAGAGCGGCCTCCAGGATCCAGGCGGCGGCGAGGG
CGCGGGCCGGGCGCCAAAGGGCCCGCGCCACCAAGGTCAATCTCGCGGCG
CTCCGCATCCAGTGCCTCTGGCGAGGTTCCGTCGACCGGGCGAGGGTGGA
CCGCCTCTGGCTCGGCGCCTTGGCCACCAGGATACAGGGACTCGTGCGCG
TGATGGTGGCAAAGAGGGTGGTCGGGCGCACACGGCGCATCCGCAACGGG
GCGGCGCGGTCGATCCAGCGGAACTTCCGGGGGACCGTGGCGAGGAAGGT
CATGGTCGGGCTGATCTGGGCGCGCAGCATGGCTCGCAGGAGGGACTTCC
TGAGGGTGCTCGCGGCGGAGGAGGAGTGGGAGAGGGAGAACATGGAGATC
AGGCAGCGGAGGTCGCGCAGGATGATGCTGGAGGAGAGGCTGGAGGCCGC
CGTGGAGGCCGAGGCGGCGGCCCACGCCGCAGTCTTCGAGCTTGAGAGCA
ACGAGCAGGAGCTCAAGACGCAGAGGATGATGCTGAGCCCTCGGGCCCTG
CAGCAGGGCTGGAAGGAGGAGCTGGACAGCAACATCGGGCAGCACAAGGA
GTGGATCACGAAGCGGAAGCTCGAGGCGGTGTTCGAGGCAAGCCTTCCTG
CGCGAGAGCTCGAGGAGCAGGTAAGAAGAGAGCTGTGGATCTTGCGGCAA
CGG
back to top