mRNA_E_fasciculatus_S2_contig7230.15417.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7230.15417.1
Unique NamemRNA_E_fasciculatus_S2_contig7230.15417.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE)

HSP 1 Score: 833 bits (2152), Expect = 1.440e-292
Identity = 426/570 (74.74%), Postives = 464/570 (81.40%), Query Frame = 1
Query:  496 LLVSRVSSSC*KYCRY---AIYASSIAYGARTLVVSVYCLTTRTDTALLQGSPL*KLPRHTPT----SSTAMAAETIMAAHCLDSIDVPPVMLKVPEDADYFELAQKITAALQSYRGKDGEEVYVKQVLHGGFDQRLDHLEPTPRGFYTFSGEPVLFRLGPKKQMNVSIQTPDGKTLQLVISTNDTTTDVKQKIQYRDSEGIIPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREESAPLSQ 2184
            L +S  SSS  + C+       ASS+++GA  L             A LQG PL KLP+HTPT    +      +TI+AAHCLDSID+PP+MLKVPEDADYFELAQKIT ALQSYR KDGEEV+VKQVLHGGFDQ LD  E TPRGFYTFSGEPVLFRLGPKKQMNV +QTPDGKTLQLVISTND+TTDVK+KIQ+  SEGIIPLD+Q LL+T + MDDL TVSE+KIK+GDTL LI+  S GGWA PPS     I VKTLTGKT+ LVVGSYNTI ++KQ +QD EGIPPD+QRLIFA  QLEDG T+S+Y+IQ  STLHLVLRLRGGG+  PPIAVGAKF DVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCT+S CDAHGRMVILNHG +DFDL+R GRDPKRCPMC  EVVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAG SYHRF   GE VEWDRLLIQARPLLKLEQRVPSAPPADER ERPNT A + TSTVA VIDHTWGRC      SAFGAT +SDETVL+CGHRFH  CL GWEQ SMIVCPICREES PL Q
Sbjct:   30 LALSTSSSSAARSCKTINKGQLASSVSWGAHRLA-----------DAALQGPPLTKLPKHTPTERHNNGPRAPLQTIVAAHCLDSIDLPPLMLKVPEDADYFELAQKITGALQSYRDKDGEEVFVKQVLHGGFDQSLDRPELTPRGFYTFSGEPVLFRLGPKKQMNVFVQTPDGKTLQLVISTNDSTTDVKKKIQH--SEGIIPLDRQRLLYTNQMMDDLLTVSEYKIKEGDTLHLIQRVSGGGWASPPSCGEYVIFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGE-VEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREESWPLPQ 585          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 6.880e-113
Identity = 168/203 (82.76%), Postives = 176/203 (86.70%), Query Frame = 1
Query: 1576 PGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREESAPLSQ 2184
            P LCLEGRCT+  CDAHGRMVILNH F+DFDL+R GRDPKRCPMC  EVVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAG SYHRF+E GE V+WDRLLIQ RPLLKLEQRVPSAPPADER ERPNT A T TSTVAVVIDHTW RCT     SAFGAT +SDETVL+CGHRFH  CLAGWEQ SMIVCPICREES+PL Q
Sbjct:   18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGE-VQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 219          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Ubiquitin (family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA)

HSP 1 Score: 234 bits (596), Expect = 5.360e-65
Identity = 134/323 (41.49%), Postives = 179/323 (55.42%), Query Frame = 1
Query: 1216 PPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEE--VEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQ-----DSMIVCPICR 2160
            P ++   FI +KTLTGKTL +   S ++ID VKQKIQD++G PPD+QRLIFA + LEDG TL  Y I  GS++  VLRLRGGG    P+     FADVSD+S L EH FS +AP+WR    GL +EGRC +  C A G+M+I  + F  F+LMR  R    CPMC  +V P TCGF DC W++ G ++ +   +   WK+A G  YHRF  D +   VEWD LLI  +P  +       A PA  +     + +   + T+             C  C +   T++ +     C H FH  C+  W Q     DS+  CP+CR
Sbjct:   67 PLNMAAAFIYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGG---GPLT-SMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDR--AHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQVNASTSDSEQESETI-------------CPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ7_ECTSI)

HSP 1 Score: 220 bits (561), Expect = 3.970e-60
Identity = 131/331 (39.58%), Postives = 176/331 (53.17%), Query Frame = 1
Query: 1207 WACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTL--------HLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQD-SMIVCPICREESA 2172
            WA P + +   I ++TLTGKT+F+ V S +T+ +VK  IQD EGIP ++Q LIF  +++ED  TL  Y +Q    L        HLVLR+RGGG           FADVS+ + +     S   P+WR   PGLC+EG C +  CDA G+MVI   G++DF+L+     P  CP+C   V P TC F  C WRY G+K G + V+   W      Y RF    + V+WD LLIQARPL  ++                     T T+TV V ID+T+  CT C D    G        VL CGH FH +C+ GW +  + +VCP CR++ A
Sbjct:   77 WARPNTRQ---IGIRTLTGKTIFIDVSSSSTLGDVKGLIQDDEGIPSEQQHLIFNGKEMEDVNTLIDYGVQPIDPLDYDVKNLVHLVLRIRGGGXXXXX-----DFADVSNPNTMQTLQVSRGGPKWRRIRPGLCIEGMCRNERCDARGQMVISPRGYKDFNLVAGETVP--CPVCDEGVEPKTCAFYQCMWRYVGKKDGISTVMSSSWGRVTDKYTRFSGK-KVVKWDHLLIQARPLDLVKP------------------VNTTTNTVRVHIDYTYLECTICIDDIERGQKT----IVLTCGHHFHAKCIRGWAKGGTKVVCPNCRQKCA 374          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA)

HSP 1 Score: 218 bits (556), Expect = 4.810e-59
Identity = 125/319 (39.18%), Postives = 174/319 (54.55%), Query Frame = 1
Query: 1234 MFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEE--VEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDC-SAFGATLSSDETVLECGHRFHIECLAGWEQ-----DSMIVCPICRE 2163
            + +++K+LTGK         ++ID VK +IQDK GIPPD+QRLI A  QL+DG  LS Y I+ GS L + LRLRGGG   PP  V   F DVSD+S LTE + S+ AP WRV + GL +EG C +  C+A G+MVI  +GF  F+LM  G     CP C     P TCGF  C W+++G ++ +   +   W+ AG S YHRF  D     VEW+ LLI                    +  R +T    P +T ++++     +   C+ C S FG+T     +  +CGH FH EC+  W +     D++  CP+CR+
Sbjct:  118 LVLTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRKV---FVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLM--GDRDVECPKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVV------------------KSRRESTAVKIPATTRSMIVR----KDNVCSICWSRFGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Ubiquitin (n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU)

HSP 1 Score: 223 bits (568), Expect = 1.500e-58
Identity = 129/349 (36.96%), Postives = 181/349 (51.86%), Query Frame = 1
Query: 1123 MDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKED-GEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREE 2166
            +D+ +T  EH I+ G  L ++          P       + V+TLTGK + +     N+I+E+K  I DKEG+PPD+QRL++A +Q+EDG  L+ Y I+  +++HLVLRLRGGG  PP     A F D+ ++  +    +S  AP WR+ +PGLC+EGRC +  C A+GRMVI+N GF  FDL+    D   CP C   V P TC F +C W++ G K G++    G W  A  +YH F ED    VEW RLLI+AR + K+ +   + P                   +    D        C  C +     S    VL+CGH FH  C+  W   S   CP CR +
Sbjct:  315 LDEDKTWVEHGIEAGTWLSIV----------PKPSRSFQLFVQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP---ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSIPKVAKSGGNEP-------------------IGKPFDMF------CCICIS-SINSSGVHKVLDCGHAFHSPCIDAWVARSP-TCPHCRHK 622          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA)

HSP 1 Score: 214 bits (546), Expect = 6.190e-58
Identity = 132/314 (42.04%), Postives = 167/314 (53.18%), Query Frame = 1
Query: 1240 ISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKED--GEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWE-----QDSMIVCPIC 2157
            I +KTLTGKT  +   + NTI+E+K  IQ++EGIPPD+QR+IFA +QLEDG  LS Y+IQ GSTLHLVLRLRGG Y  P       FADVSD S   EH FS  AP WR+   GL +EGRC +  C A+  +VI   GF+ F+L + G     CP CRS+V P TCGF DC W+++G KA         W+   G  Y RF  D     +EW+ LLI  +PL +       A  A+  E     R             H+   C  C     +   LS      ECGH FH  C+  W      Q ++  CP+C
Sbjct:  104 IYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGG-YVEPRC-----FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKE-------AVAAELVESAQEARL------------HSDLVCAVC-----WTEILSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Putative (ring and ubiquitin domain containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VNX4_9EUKA)

HSP 1 Score: 216 bits (550), Expect = 2.030e-56
Identity = 141/372 (37.90%), Postives = 196/372 (52.69%), Query Frame = 1
Query: 1063 RDSEGIIPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGR-MVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGM--WKEAGGSYHRFKE-DGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREE 2166
            ++ EG+ P DQ  L     ++   RT+ ++ +++ DTL+L +L              M I +KTLTGKT+ L V + NTI+E+K  IQDKEGIPP++QRLIFA +QLEDG  L+ Y I K +TLHLVLRLRGGG           F DV  S  L +  +S  AP+WR    G+ +EGRC +S C AH R MVI N GF DFDL+R   +   CPMC S +     GF +C WR   RK   TN ++    WK+AG  Y  + E      ++ RL++ A+ L            +D RE+   +      +T  V      G C  C +          +  V++C H FH  C+  W+ DS + CP C+E+
Sbjct:  263 KEKEGLSP-DQYRLFSEYSKIRQDRTIQDYGLEELDTLELYKLGI-----------SMKIFIKTLTGKTIALQVQNDNTIEEIKSLIQDKEGIPPEQQRLIFAGKQLEDGYLLADYKILKEATLHLVLRLRGGGEA-------MNFVDVERSDALIQRQWSKTAPQWRCVSRGMAIEGRCDNSSCQAHNRGMVIFNVGFSDFDLLR---NESHCPMCYSRIKGIKPGFNNCIWRIDFRK---TNGIISRLKWKKAGDEYTTYDEAQAGTADFTRLIMHAKQL------------SDTREQTIVSEGKEMKTTFIV-----GGSCGLCHEDK--NDERDKNVIVMKCSHNFHKVCIKIWK-DSGLKCPHCKED 589          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Putative (ring and ubiquitin domain containing protein (Fragment) n=2 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WRA2_9EUKA)

HSP 1 Score: 207 bits (526), Expect = 2.260e-54
Identity = 143/409 (34.96%), Postives = 206/409 (50.37%), Query Frame = 1
Query:  967 MNVSIQTPDGKTLQLVISTNDTTTDVKQKIQYRDSEGI--IPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKE-DGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETV-LECGHRFHIECLAGWEQDSMIVCPICREESAPLS 2181
            M + I+T   KTL L ++++D     KQ IQ     GI  I +++Q L+   K++ D + + +  I+ G TL L++    GG         M I +KTLT KT+ L V S + I  VKQ+I DKE IP ++Q+LIFA ++LED  TL  Y+IQ+ STLHL+ RL GGG           F DV  +  L +  +S  AP WR+A  GLC+EG C +  C+A G+MVI + GF DFDL     +   CPMC +   P    F +C +R   +KA      +  WK+AG  Y+ + E     V++ RL+I  + L    +   S   + E E               V +    G C +  D      T   D TV + CGH FH  C+A W++  +  CPIC +    L+
Sbjct:   94 MQIFIKTLQNKTLTLNVNSDDQIISAKQLIQ-----GISGISVNEQRLIFAGKELTDDQKLCDCNIQSGKTLLLLQRLIVGGKV------EMQIYIKTLTQKTVTLQVRSDDQIISVKQQIVDKEHIPVEQQKLIFAGKELEDQLTLRDYNIQRDSTLHLIARLTGGG-------ASMSFVDVERTDALVQKKWSTSAPDWRLASKGLCIEGICENEGCEAKGQMVIFSAGFTDFDLELSVAN---CPMCHNPFKPIKPAFNNCMYRIDFQKANGAVTKI-PWKKAGDEYNTYDEKQAGIVDYTRLIIHTKVLAAGRENTDSKGKSAELE--------------TVTVSKVCGICHKMLD-----VTYGRDPTVVMNCGHSFHGGCVASWKERGL-DCPICEDPIKELA 460          
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.170e-53
Identity = 128/322 (39.75%), Postives = 167/322 (51.86%), Query Frame = 1
Query: 1210 ACPPSLEHMFISVKTLTGKTLFLV-VGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQ---DSMIVCPICR 2160
            A P       I VKTL G++L L  V   +T+D +K +I D EGIP D+QRLIFA +QLED  T+  Y +++ STLHLVLRLRGGG  P  +    +FADVS+   +   +FS  APRWR    GL +EG C  + C A G +VI   G   F L  +      CPMC S + P TCGF  C W Y G K  +  ++ G W+ AG   Y RF+E      W RL++ A+P +K++   P A  AD  + +    A+ P    AV +    GR              S   T   CGHR+H  CLAGW +    S   CP CR
Sbjct:  146 AAPGPQGSRAIYVKTLRGQSLPLSGVLPCDTVDILKDRISDCEGIPADQQRLIFAGKQLEDSRTVDDYSMERDSTLHLVLRLRGGGCGPSSL----QFADVSNDGAIERRSFSQDAPRWRTVRRGLNMEGYCRDARCKARGALVIAPIGMAAFPLGSRCT----CPMCGSAITPVTCGFNACAWTYDGAKE-DGELVRGAWRTAGDDKYERFRESDNMATWSRLVLVAKPAVKVKSD-PGAAVADAVDNKEAAGASEPDE-CAVGLRGFGGR--------------SGAVTTTRCGHRYHALCLAGWRECSHASCSKCPTCR 442          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.440e-29274.74protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
RING-type6.880e-11382.76domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Ubiquitin5.360e-6541.49family protein n=1 Tax=Phytophthora megakarya TaxI... [more]
Uncharacterized3.970e-6039.58protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.810e-5939.18protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Ubiquitin1.500e-5836.96n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S... [more]
Uncharacterized6.190e-5842.04protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]
Putative2.030e-5637.90ring and ubiquitin domain containing protein n=1 T... [more]
Putative2.260e-5434.96ring and ubiquitin domain containing protein (Frag... [more]
Uncharacterized1.170e-5339.75protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7230contigE_fasciculatus_S2_contig7230:954..5625 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score222.2
Seed ortholog evalue5.3e-55
Seed eggNOG ortholog2880.D7FKZ7
Model size3082
KEGG koko:K02983
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.protein tag
EggNOG OGsCOG1552@1,KOG0003@2759
Ec32 ortholog descriptionZinc finger, RING/FYVE/PHD-type
Ec32 orthologEc-00_007020.1
Cds size1500
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7230.15417.1prot_E_fasciculatus_S2_contig7230.15417.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7230 1849..4921 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842386.8032928-UTR-E_fasciculatus_S2_contig7230:953..18481696842386.8032928-UTR-E_fasciculatus_S2_contig7230:953..1848Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7230 954..1848 -
1696842386.8766508-UTR-E_fasciculatus_S2_contig7230:4921..52711696842386.8766508-UTR-E_fasciculatus_S2_contig7230:4921..5271Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7230 4922..5271 -
1696842386.8970318-UTR-E_fasciculatus_S2_contig7230:5288..56251696842386.8970318-UTR-E_fasciculatus_S2_contig7230:5288..5625Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7230 5289..5625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842386.8148406-CDS-E_fasciculatus_S2_contig7230:1848..30751696842386.8148406-CDS-E_fasciculatus_S2_contig7230:1848..3075Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7230 1849..3075 -
1696842386.8278842-CDS-E_fasciculatus_S2_contig7230:3563..36681696842386.8278842-CDS-E_fasciculatus_S2_contig7230:3563..3668Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7230 3564..3668 -
1696842386.84523-CDS-E_fasciculatus_S2_contig7230:4542..46981696842386.84523-CDS-E_fasciculatus_S2_contig7230:4542..4698Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7230 4543..4698 -
1696842386.8566587-CDS-E_fasciculatus_S2_contig7230:4909..49211696842386.8566587-CDS-E_fasciculatus_S2_contig7230:4909..4921Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7230 4910..4921 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7230.15417.1

>prot_E_fasciculatus_S2_contig7230.15417.1 ID=prot_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=500bp
MAAETIMAAHCLDSIDVPPVMLKVPEDADYFELAQKITAALQSYRGKDGE
EVYVKQVLHGGFDQRLDHLEPTPRGFYTFSGEPVLFRLGPKKQMNVSIQT
PDGKTLQLVISTNDTTTDVKQKIQYRDSEGIIPLDQQHLLHTCKQMDDLR
TVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVG
SYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLH
LVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLC
LEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTC
GFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQA
RPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTD
CSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREESAPLSQ*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7230:954..5625-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7230.15417.1 ID=mRNA_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4672bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7230:954..5625- (Ectocarpus fasciculatus EfasUO2)
ATATGCATAGTGCTCGGATCGAAGGAGGGGAGGCTCTCCTCATCACAATC GGTCCCCGCCTGGAATTAGGAAGAAAGCAGCGGCCAAAAACGCGCGTAGA AAAATATCAGAATTTCCTAAAAACACACTCATGGTGTTATTAAAAATAGG GACTGCATCACAAGCACTTGATGTTTGTTGGATTTGGGTGTTTTGTGACG TTCAGTTTTGGGGATGCGCTACAAGATCAGAGGTTTGATTCTTGTCTCTA ATCAAGCTCGAGCACGAGGGCAATCAATCAAGGAGGTGGTTTCTCTTTGG GAGTTATTATAGGTTTCAGTCTACTTCGGTCAGATTGGCGCCACGTTCGG GTAGGTTTGTGTGTCCAAGCAAGGTTCGCTGCCGCTACGCTCGGCGCCAA GGGTAATAAACGTTCAGACGTCTTGAGCGCCATGCACAATAGTACTTTGA AGAAGAGAAAGGCCTACGCTTGGTGTATCAAGCGCCTTAAACGATGGGAC CCACGCCGGCCTCTCCTCGTCTCCCGGGTGTCTTCGTCTTGCTAGAAGTA CTGTAGGTACGCAATCTATGCCTCTTCAATCGCTTACGGCGCACGCACGC TCGTTGTTTCCGTTTATTGCCTGACAACGCGAACGGATACTGCTCTTCTT CAAGGTTCACCTCTCTGAAAGCTCCCGAGGCATACTCCCACGAGCAGCAC AGCAATGGCCGCAGAGGTGAGAAGGACACGGGCATTTCTCGAAAGAACGA CTCGAAGAGGTGAAGTTGATGGGTGACGGGTTCTATAGTGTTATGTCACA TAGTGTGGGAGAGTGAGAAAAGAACAGACGGCAAGGTCGGATAGATCTAT GCGTCTTTTCTGCCTTGCTTCTGGATGATACATACCCACTCGTACTTACG GAACCCACTTTCCCGGCTCCTCTTCAGACAATTATGGCAGCACACTGCCT GGATTCCATCGATGTGCCTCCCGTGATGCTCAAGGTCCCAGAGGATGCTG ACTACTTCGAGTTGGCCCAGAAGATCACGGCGGCCCTTCAGTCTTACCGC GGCAAAGACGGAGAAGAAGTCTACGTTAAGCAGGTTGGCTGTCTGACGTT GTTTGCTCGAGTTCCGTTCATTTTCCGCCAATACCTGTAACTTCCGCCTA CGAAGTGTTGGTTCGCATCGGTGCCGTCCCTACCCCTCCGACCGCTCGTA GTACATGTTGTCGAAGCCCTAGCAACCCAGTTCTAGGGTGGGGGCAGTTA TGACCGCGGTCTCCAGGCTCTCGGCAACGACATTATTCAGGGCTCTGGCT GGCGCTGGTTCAGACTTTTCGGCCACAGTATTCGTGGTGCTTATATTTGA CGTGCCCAATCTCTCTAACCCGATGACCGTAATTACACGCCTTGCAATCA CGTAGACAACAACCTGCAACCAATCACCACATAGAAGTTGTTGTACCCCG GAGCCGAGGTCTGTCGGTTGTAGTGCAGTATGTTGCCTACCTGCCTACTC CAGTTGTTGTTTTTTTGTCCTGTCACTCCTCGTTCGTCGTACGACACGAT ACCCTTTAGACAAGGTGGCAAACACAGCGGTTGCATTCTCTACGACAGTC GCTATTGCAATCGTCTTTCCGCTCCCTCCTGTCAATCCTAAGCATTGAAT TGTCGGCACCCCCGCACAGTACCCCCCCCACCCGAGTGGGAAAGATCCCG CAAATGCCTCCACCTACGCCTACGTTGCCCCATGACCCCCGGGCCGGAAT ACCACCCCTGCAATGAAATTCGGCCATCCTTGACGCCCGTCCTTGGTGCC CGCTGGGCGCTAATCGTGAGTTGTAGATCTCTTGCTTGCAGTCGAACTCA AACCTACCTCATCATCGATCTCACCCAACTGTCTCATGGTCATAGCACAG TGCGTCACCGCTGCTGCCGCTGTTGTTGATGATGCTGCTGCTGCGATTTC GGAACAGGTTCTGCACGGCGGGTTCGACCAGAGGTTGGACCATCTTGAGC CTACACCCAGAGGCTTTTACACTTTCTCGGGGGAACCAGTGCTGTTTCGA TTGGGCCCGAAAGTGAGCGCACCCTGGTACAACCTTTTCACACTGCACGC CTGGGCCACAGACGTCTGTGGAGGCGCACAAAACACAACATCTTTGCCCC CGGTTTCAATCCCGAGCATTGCTCCTTCGCAAGAAATTCATTGGCCTGAG CAGATCGTGGCACATCGGTGATTTTGCTGCCACCACCGAGAGGGCGGGCC AAGGTGTTTGCGTTTGTACGGCTTGATCGCCCGAGCAAAACCAAGTGACG CGGTTAAACAAACGGGGAAGGTGCTATAGTTCCGTGTGCTTGGCATCCCA GCCACAATCGCAAGTGCGATGTGACCGTGGTTTGAGTAGCCTGGCTGGCG GATTTGATGCTCTTAGCCGGTCCGAGCAGTAGATATCGCTGGCGAAAGTC TTCTGGGCTGCGTATGATCTTCCCTCGTCTGTTCTGCTGACTTGACACCG TTTGTGACCCCCCCCCTTCACTGTTGCTCGTCTGTTTGTTCCGCTTGCAG AAGCAGATGAATGTCTCCATCCAGACCCCCGACGGAAAAACACTCCAGCT TGTCATCAGCACGAACGACACGACCACCGACGTGAAGCAAAAGATACAGT ACAGGGACAGCGAGGGCATCATCCCGCTCGACCAGCAACATCTGCTCCAC ACATGCAAACAGATGGACGACCTTCGCACGGTTTCAGAACACAAGATCAA AGATGGAGATACGCTTCAGTTGATTCGGCTCTGTAGCAGGGGCGGGTGGG CGTGTCCTCCTTCACTTGAGCATATGTTCATCTCCGTCAAAACCCTCACC GGGAAAACTCTCTTCCTTGTCGTCGGCTCGTACAACACGATTGACGAAGT GAAGCAAAAGATACAGGACAAGGAGGGGATCCCGCCCGACGAGCAGCGTC TGATATTCGCCAGCAGGCAGCTGGAGGACGGTTGTACGTTGTCATATTAC GACATCCAAAAAGGATCTACGCTACACTTGGTGCTTCGCTTGAGGGGAGG TGGATACTGTCCTCCCCCCATTGCCGTCGGCGCGAAGTTTGCCGACGTTT CCGACTCGTCCGGCCTCACAGAGCACGCCTTCTCGGACCACGCCCCGCGC TGGAGGGTTGCCGAGCCCGGGCTTTGCCTGGAAGGAAGGTGCACCAGCAG CTACTGCGACGCTCACGGCCGCATGGTCATCCTCAACCATGGGTTCCAGG ACTTCGACCTGATGCGGCAAGGCAGAGACCCGAAGCGCTGCCCAATGTGC CGCTCCGAGGTGGTGCCGAGCACGTGTGGCTTTACCGACTGCACGTGGAG GTACAAGGGGCGGAAGGCCGGGGAGACCAACGTCCTGGTCGGCATGTGGA AAGAGGCCGGCGGCAGCTACCACCGCTTCAAGGAAGATGGTGAGGAGGTG GAGTGGGACAGGCTGCTCATCCAGGCCAGGCCCCTGCTCAAGCTCGAGCA ACGTGTCCCTTCCGCACCACCGGCGGACGAAAGGGAGGAACGTCCCAACA CGAGAGCCACTACCCCTACGTCCACCGTAGCAGTCGTGATCGACCACACG TGGGGGCGATGCACGAGGTGCACAGATTGTTCCGCGTTCGGGGCAACCCT TTCGTCCGACGAGACGGTCCTGGAGTGTGGCCACCGGTTCCACATCGAGT GCCTCGCGGGCTGGGAGCAGGACTCGATGATCGTCTGCCCCATCTGCCGG GAAGAGTCGGCGCCACTGTCTCAGTAGAGAGGAGCGGCGTTCACGAATGT TTGGCCGACGAAGGGCTCGACGCAGTGCGCATGGTGTGTGTGTCGTGCGT TTTTGGATATCGAGTCATCGTTACTACGCCGGATGCAAGAACAACCGTGT TTATTTCTTTAGACTAGGTGTTCACCTGTCAACCCAGGAGGCGTAGATAT GCTGCCTCAGGGTTGTTTGATGAGAAGATCTTCCTCCTACAAGTGTTTAG TCAAGTAGTGCGGGTAAATGCCAGGCGTGCGTTGATCGTATTGCGAGGAC GAAGCAGAACGGGAGAGCGTTTAGGCTCTGCCGTGGTTGCCTTTGGGAGT CATCTGTATGACATGGGTTGGATTGGTTCGGGTTCAGCTGGGTTTGGTCG AATTGACTTGGGTTGGTCGTTTTGGGTACTGAAACATGCCCTCTCGAGTC CACGTTTTCGTACCGTAGGGTACTGTAGGAGAGGGCACATAGCTACTGCA GCTGTAAAATACGTTGTTGTATCACCGGTCGCCTAACGCACCACAAAGAC GGCCAATCTGGATCTCATGTTCGTGCACACATCTGGTTGGATCGAACGAG CCATGTTCGTGCCCACGTCTATCTCTGATTGTATGGAACGAACCATCCGG CTGCAACTAACATGAATGCGAGTAGGATAGATACACAGAACTTGTACCAA ATCACGGGGCGAGAATGAGATGACACAAGGCGTCAAGTTCCCGAAACGGC ACACAAGCACGTGGTGAGGCAAACACATGCACCAGTAGAAAATGAACCCC CAACAACACAACAACATACAGCGGAATATGACATGGAACCTCGGTAGCTC CAGCCAAATCATTGATGAACCAACCCAAGCCCCCACAGGAACAAAACACA CACACACACTCGTGGGTTCAGC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7230:954..5625-

>mRNA_E_fasciculatus_S2_contig7230.15417.1 ID=mRNA_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1500bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7230:954..5625- (Ectocarpus fasciculatus EfasUO2)
ATGGCCGCAGAGACAATTATGGCAGCACACTGCCTGGATTCCATCGATGT
GCCTCCCGTGATGCTCAAGGTCCCAGAGGATGCTGACTACTTCGAGTTGG
CCCAGAAGATCACGGCGGCCCTTCAGTCTTACCGCGGCAAAGACGGAGAA
GAAGTCTACGTTAAGCAGGTTCTGCACGGCGGGTTCGACCAGAGGTTGGA
CCATCTTGAGCCTACACCCAGAGGCTTTTACACTTTCTCGGGGGAACCAG
TGCTGTTTCGATTGGGCCCGAAAAAGCAGATGAATGTCTCCATCCAGACC
CCCGACGGAAAAACACTCCAGCTTGTCATCAGCACGAACGACACGACCAC
CGACGTGAAGCAAAAGATACAGTACAGGGACAGCGAGGGCATCATCCCGC
TCGACCAGCAACATCTGCTCCACACATGCAAACAGATGGACGACCTTCGC
ACGGTTTCAGAACACAAGATCAAAGATGGAGATACGCTTCAGTTGATTCG
GCTCTGTAGCAGGGGCGGGTGGGCGTGTCCTCCTTCACTTGAGCATATGT
TCATCTCCGTCAAAACCCTCACCGGGAAAACTCTCTTCCTTGTCGTCGGC
TCGTACAACACGATTGACGAAGTGAAGCAAAAGATACAGGACAAGGAGGG
GATCCCGCCCGACGAGCAGCGTCTGATATTCGCCAGCAGGCAGCTGGAGG
ACGGTTGTACGTTGTCATATTACGACATCCAAAAAGGATCTACGCTACAC
TTGGTGCTTCGCTTGAGGGGAGGTGGATACTGTCCTCCCCCCATTGCCGT
CGGCGCGAAGTTTGCCGACGTTTCCGACTCGTCCGGCCTCACAGAGCACG
CCTTCTCGGACCACGCCCCGCGCTGGAGGGTTGCCGAGCCCGGGCTTTGC
CTGGAAGGAAGGTGCACCAGCAGCTACTGCGACGCTCACGGCCGCATGGT
CATCCTCAACCATGGGTTCCAGGACTTCGACCTGATGCGGCAAGGCAGAG
ACCCGAAGCGCTGCCCAATGTGCCGCTCCGAGGTGGTGCCGAGCACGTGT
GGCTTTACCGACTGCACGTGGAGGTACAAGGGGCGGAAGGCCGGGGAGAC
CAACGTCCTGGTCGGCATGTGGAAAGAGGCCGGCGGCAGCTACCACCGCT
TCAAGGAAGATGGTGAGGAGGTGGAGTGGGACAGGCTGCTCATCCAGGCC
AGGCCCCTGCTCAAGCTCGAGCAACGTGTCCCTTCCGCACCACCGGCGGA
CGAAAGGGAGGAACGTCCCAACACGAGAGCCACTACCCCTACGTCCACCG
TAGCAGTCGTGATCGACCACACGTGGGGGCGATGCACGAGGTGCACAGAT
TGTTCCGCGTTCGGGGCAACCCTTTCGTCCGACGAGACGGTCCTGGAGTG
TGGCCACCGGTTCCACATCGAGTGCCTCGCGGGCTGGGAGCAGGACTCGA
TGATCGTCTGCCCCATCTGCCGGGAAGAGTCGGCGCCACTGTCTCAGTAG
back to top