mRNA_E_fasciculatus_S2_contig7229.15412.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC110990892 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B8A2S2_ACAPL) HSP 1 Score: 134 bits (338), Expect = 2.400e-32 Identity = 101/327 (30.89%), Postives = 149/327 (45.57%), Query Frame = 3
Query: 183 SSQGAKSLCGLPGFVCLQKLYAAINTEGEADNMVFYDSP--------------QPGPYSAPRKSTFRGINGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPP--ATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNM 1115
S + K GLP + Q L+ + + A NM +Y +PGP K + N L+ +R + + FGVS T + +TWV +L +L+P + P +E+ P F K V ++D TEI+ R +YS YK +PT K L+G+TP+G I +IS GG SD +LV + +I +L ++MADRGFN I L + + PP T QF E + T+ VAN RIHVERAIG LK++ + + + +D+M V VC A+VN+
Sbjct: 7 SDELVKVYTGLPNYALFQWLFEEV--KHHASNMQYYKGKVSQTDKKYQKNNLEKPGP-----KRSLALENEFLMTLMKLRLNLREEDLAFRFGVSQSTVSQVISTWVPFLDKELQPLIYWPSEEEILKYYPQCF-HKYKGTVRCIIDCTEIQIDRPSLAASNAQVYSQYKSRPTLKCLVGITPAGTISFISKPTGGNTSDKKLVKMTNIIEKLEPND-----------------ILMADRGFN-IQELLLHKSVKLIIPPFMRTTSSSSQFTESEDTRTKTVANARIHVERAIGRLKEFAILKGPIPLTMVDLMESVLVVCSAIVNL 307
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC117315841 n=2 Tax=Pecten maximus TaxID=6579 RepID=UPI0014587C5D) HSP 1 Score: 134 bits (338), Expect = 9.810e-31 Identity = 83/263 (31.56%), Postives = 127/263 (48.29%), Query Frame = 3
Query: 348 NGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNMLNEPFVS 1136
N F LV +R + L S G+S + F+TWV++LR +L +R P + E+ P F R +V++ D TEI + +S YKH T K L+G+TP G +C++S++YGG SD ++ G++ ELV G VMADRGF+ IA L G+ PP + Q E TR +A +RIHVERAI +K +++ + S D++ +F C A++ + P +
Sbjct: 316 NEFFAVLVRLRVKLLLTDISQRLGISEAHFSKIFSTWVRFLRLELSELMRFPSLREIQKNLPPQFSRYPNTRVII--DCTEIHVEKPSSLKAQRQTWSNYKHNNTYKALVGITPDGTVCFLSNLYGGCASDKKITRECGIVGELVS-----------------GDCVMADRGFD-IADLLNPKGVQLNIPPFLHAKDGQLTPEQVEETRRIAEVRIHVERAIQRIKSFQILQGTIPLSLHDLVEDIFLTC-AILTIFQTPIIK 557
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC114970732 n=1 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF11E27) HSP 1 Score: 132 bits (332), Expect = 3.110e-30 Identity = 95/307 (30.94%), Postives = 144/307 (46.91%), Query Frame = 3
Query: 210 GLPGF----VCLQKLYAAINTEGEADNMVFYDSPQPGPYSAPRKSTFRGINGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNML 1118
GLP + C + A N GE + + +P+ G PR T L+ +R G+ + FG++ T W K LR +L P +R+PE D + +P FK+ KVV+V+D TEIE R N YS+YK +PT KVL+G+TPSGV+ Y+S ++ G SD E++ +S + L G VMAD+GFN I +L G + P+ + QF E + + +A+LRIHVER + +K W + + + + + + AL N L
Sbjct: 204 GLPNYKMLMFCFDLVQEASNEFGETEGEMNQKTPKIG---RPRAQT--PFQEYIMVLMRLRLGLFEKDLAHRFGIAIGTVSNITRKWYKLLRAQLGPLIRMPESDIIRYYSPPAFKQL-FPKVVIVIDCTEIEMERPSALNTQSACYSSYKSRPTMKVLVGITPSGVLSYVSELFPGSTSDQEIIVKSNFLDILAP-----------------GDSVMADKGFN-IKDELASVG-AVLEIPSFLKKGTQFTEEEINKNKAIASLRIHVERQMERIKNWHILDRRMPITMAPYASDIVVIISALANFL 485
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC119437367 n=2 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI0018999409) HSP 1 Score: 129 bits (324), Expect = 3.630e-30 Identity = 79/252 (31.35%), Postives = 120/252 (47.62%), Query Frame = 3
Query: 366 LVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNMLN 1121
LV +RTGM + F +S R FTTW+ +L +LR +P +++ P +F+ E ++LDATE+ R + +S+YKH T KVLIG TP G I ++S ++GG +SD ++ SG++ +L G +M D+GF L PP HE+Q D TR +A+ R+HVER I +K + + + F MD+ +F+VC L N N
Sbjct: 102 LVRLRTGMRGKELARNFSISESQVSRIFTTWINFLERELRHLNHIPSQEQILPHLPKSFRH--FENTRLILDATEVRIQRPSSQSAQRQTFSSYKHYNTYKVLIGCTPDGYIAFVSRLWGGSVSDKNILQCSGLLDDLEP-----------------GDAIMVDKGFT---FPYLPPELTVYRPPFRERHEMQMNAQDVLETRRIASARVHVERVIARVKSFHILDRPFPICMMDIAEHIFKVCCFLSNYRN 331
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC124458378 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04FFC4) HSP 1 Score: 131 bits (330), Expect = 6.100e-30 Identity = 89/255 (34.90%), Postives = 128/255 (50.20%), Query Frame = 3
Query: 360 FCLVVMRTGMTLVVASML--FGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNML 1118
+ LV+MR + L + FGV+ T W+K LR KL +R+PE D + +P FK+ +VV+V+D TEIE R N YS+YK +PT KVLIG+TPSGV+ YIS ++ G SD E+V +S + L G VMADRGFN I +L G ++ P+ + + QF + + + + +LRIHVER + LK W + + K + + V AL N L
Sbjct: 255 YILVLMRLRLGLFEKDLAHRFGVAVGTVSNIIRKWIKLLRAKLGSLIRMPERDTIKYYSPPAFKQL-FPQVVIVIDCTEIEMERPSALNNQSACYSSYKSRPTMKVLIGITPSGVLSYISELFPGSTSDLEIVKKSNFLDILSP-----------------GDSVMADRGFN-IKDELASVG-AFLEAPSFLQKKTQFTQEEINKNKAIPSLRIHVERQMERLKNWHILDRKIPITMAPLASDALVVIAALANFL 489
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC109481748 n=1 Tax=Branchiostoma belcheri TaxID=7741 RepID=A0A6P4ZST3_BRABE) HSP 1 Score: 132 bits (331), Expect = 6.210e-30 Identity = 84/253 (33.20%), Postives = 132/253 (52.17%), Query Frame = 3
Query: 366 LVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNMLNE 1124
L+ +R G+T+ ++LFG+ P + + +TWV++L G L+P + P ++ P FK K ++ ++D TEI R + + +S YK T KVL+G+TP+G I ++S YGGR SD + +SG + +LVE ++MADRGF I L PPA + + Q + T+ VANLRIHVERAI LK +++ + F S + + +VC ALVN+ ++
Sbjct: 290 LMRLRLGLTINFLAILFGLVPSSCSQIVSTWVRFLSGTLQPLIVWPSRHAISTTLPTQFKNK-CSRIRCIMDCTEIFIERPRNLEMQAATWSDYKKHNTMKVLVGITPNGHISFLSKAYGGRASDVSITRKSGFL-DLVEPND----------------VIMADRGFP-IQEDLLLRHATLQIPPAA-QGKRQMARNKVKKTKTVANLRIHVERAINRLKDFRILDGTFPISLLPAADDIIKVCAALVNLQSD 522
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC111324035 n=1 Tax=Stylophora pistillata TaxID=50429 RepID=UPI000C043661) HSP 1 Score: 130 bits (326), Expect = 7.360e-30 Identity = 90/282 (31.91%), Postives = 131/282 (46.45%), Query Frame = 3
Query: 309 PYSAPRKSTFRGINGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFN-GIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQ------------WKMCENKFDSSQMDVMPLVFEVCGALVNM 1115
P + + T L+ +R + L + FGVS T R FTTW+ L +L P +R PE DE+ P F+ +K +++D EI R + +S YKH+ T KVLIG+TP G +C+ S +GGR SD L R G + L G +V+ADRGF ++ Y+A G PA + + Q D E TR +AN+RIHVER IG L+Q + C N +++ ++ + VC AL N+
Sbjct: 127 PLVSRKSKTLTLFQEFVMVLIKLRLNVPLQDLAFRFGVSLSTISRKFTTWMTVLDVRLSPLIRWPERDELWRTMPMCFQFSFGKKTTIIIDCFEISIERPSNLLARAQTFSNYKHRNTVKVLIGITPQGSVCFTSKAWGGRTSDKYLTERCGFLDNLKP-----------------GDVVLADRGFTISESVAFYQAQSG---TPAFTKGKNQLDPFDVERTRGIANMRIHVERVIGLLRQKYTILQSTLPLDYLTCSN--NAANCPLIDRMIRVCSALTNL 386
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC111107245 n=5 Tax=Eukaryota TaxID=2759 RepID=A0A8B8B4M8_CRAVI) HSP 1 Score: 131 bits (329), Expect = 8.160e-30 Identity = 106/319 (33.23%), Postives = 161/319 (50.47%), Query Frame = 3
Query: 198 KSLCGLPGFVCLQKLYAAINTEGEADNMVFYD--SPQPGPYSAPRK-STFRGINGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEI---ETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNMLNEPFVS 1136
K GLP F L+ + + E MV++ S PG + PR+ + + I+ L+ ++ G+ + + FGVS T + FTTWV L +LRP P D + P+ F + V+LD TEI ++ + + NL+F S YKH T K LIG+TPSGVI +S +GGR+SD +++ +S ++ +++E+G G VMAD+GF IA L + G PP R QF D T+++A LRIHVERAIG +K + + + S ++ +F VC + N L+ P V
Sbjct: 200 KFYTGLPSFAVFMWLFNYLVPKCE--KMVYWRGASATPGERARPRRLMSLQLIDQFLATLMRLKVGLYVEDIAERFGVSVGTYSQYFTTWVCLLYQELRPLNPFPSRDIIQRNMPSCFHT--FPNLRVILDCTEIFVQKSSSLVNQNLSF---SHYKHHTTVKFLIGITPSGVISLVSEGFGGRVSDRQMIEKS-LLLDMLEEGDG----------------VMADKGFT-IADMLEKKGCTLNIPPF-RSSSTQFSSQDVLKTQEIAKLRIHVERAIGRVKNFHIFDGVLSLSLAPLVSQMFSVCCWITN-LDVPLVD 491
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: uncharacterized (protein LOC119441499 n=1 Tax=Dermacentor silvarum TaxID=543639 RepID=UPI00189963FF) HSP 1 Score: 131 bits (329), Expect = 1.620e-29 Identity = 80/255 (31.37%), Postives = 121/255 (47.45%), Query Frame = 3
Query: 357 FFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFNGIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQWKMCENKFDSSQMDVMPLVFEVCGALVNMLN 1121
F LV +RTGM + F +S R FTTW+ +L +LR +P +++ P +F+ E ++LDATE+ R + +S+YKH T KVLIG TP G I ++S ++GG +SD ++ SG++ +L G +M D+GF L PP HE+Q D TR +A+ R+HVER I +K + + + F MD+ +F+VC L N N
Sbjct: 324 FMVLVRLRTGMRGKELARNFSISESQVSRIFTTWINFLERELRHLNHIPSREQILPHLPKSFRH--FENTRLILDATEVRIQRPSSQSAQRQTFSSYKHYNTYKVLIGCTPDGYIAFVSRLWGGSVSDKNILQCSGLLDDLEP-----------------GDAIMVDKGFT---FPYLPPDLTVYRPPFRERHEMQMNAQDVLETRRIASARVHVERVIARVKSFHILDRPFPICMMDIAEHIFKVCCFLSNYRN 556
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Match: SAP (domain-containing protein n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SNI8_STYPI) HSP 1 Score: 130 bits (326), Expect = 3.120e-29 Identity = 90/282 (31.91%), Postives = 131/282 (46.45%), Query Frame = 3
Query: 309 PYSAPRKSTFRGINGLFFCLVVMRTGMTLVVASMLFGVSPQTGGRAFTTWVKYLRGKLRPWLRLPEVDEVAAKAPANFKRKQMEKVVVVLDATEIETVRVWHTNLAFYLYSTYKHKPTGKVLIGVTPSGVICYISSMYGGRMSDTELVARSGVISELVEKGFGSRTAAENSGGGMGGYMVMADRGFN-GIAMQLYEAGLGYVAPPATREHELQFKEVDAEHTRDVANLRIHVERAIGALKQ------------WKMCENKFDSSQMDVMPLVFEVCGALVNM 1115
P + + T L+ +R + L + FGVS T R FTTW+ L +L P +R PE DE+ P F+ +K +++D EI R + +S YKH+ T KVLIG+TP G +C+ S +GGR SD L R G + L G +V+ADRGF ++ Y+A G PA + + Q D E TR +AN+RIHVER IG L+Q + C N +++ ++ + VC AL N+
Sbjct: 264 PLVSRKSKTLTLFQEFVMVLIKLRLNVPLQDLAFRFGVSLSTISRKFTTWMTVLDVRLSPLIRWPERDELWRTMPMCFQFSFGKKTTIIIDCFEISIERPSNLLARAQTFSNYKHRNTVKVLIGITPQGSVCFTSKAWGGRTSDKYLTERCGFLDNLKP-----------------GDVVLADRGFTISESVAFYQAQSG---TPAFTKGKNQLDPFDVERTRGIANMRIHVERVIGLLRQKYTILQSTLPLDYLTCSN--NAANCPLIDRMIRVCSALTNL 523 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7229.15412.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7229.15412.1 >prot_E_fasciculatus_S2_contig7229.15412.1 ID=prot_E_fasciculatus_S2_contig7229.15412.1|Name=mRNA_E_fasciculatus_S2_contig7229.15412.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=322bp MSSQGAKSLCGLPGFVCLQKLYAAINTEGEADNMVFYDSPQPGPYSAPRKback to top mRNA from alignment at E_fasciculatus_S2_contig7229:4789..7280- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7229.15412.1 ID=mRNA_E_fasciculatus_S2_contig7229.15412.1|Name=mRNA_E_fasciculatus_S2_contig7229.15412.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2492bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7229:4789..7280- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7229:4789..7280- >mRNA_E_fasciculatus_S2_contig7229.15412.1 ID=mRNA_E_fasciculatus_S2_contig7229.15412.1|Name=mRNA_E_fasciculatus_S2_contig7229.15412.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=966bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7229:4789..7280- (Ectocarpus fasciculatus EfasUO2)back to top |