mRNA_E_fasciculatus_S2_contig7168.15344.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: 5-oxoprolinase ((ATP-hydrolysing) 5-oxoprolinase (ATP-hydrolysing) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNG4_ECTSI) HSP 1 Score: 206 bits (524), Expect = 1.540e-59 Identity = 105/106 (99.06%), Postives = 105/106 (99.06%), Query Frame = 2
Query: 2 LEAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
L AVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL
Sbjct: 177 LAAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 282
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: Hydantoinase (B/oxoprolinase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL8_9STRA) HSP 1 Score: 148 bits (373), Expect = 3.450e-39 Identity = 74/104 (71.15%), Postives = 86/104 (82.69%), Query Frame = 2
Query: 8 AVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
A+R L AVL +G++SLAVVFLHSYT+A HER VG LA +MGF HVSLSSEVMPMVKAVPRG+TTAADAYLTP+I +Y+ASF DD++TLFMQSDGGL
Sbjct: 128 ALREQLSAVLARGVSSLAVVFLHSYTYAAHERAVGDLARDMGFAHVSLSSEVMPMVKAVPRGYTTAADAYLTPIITQYLASFXXXXXXXXDDIQTLFMQSDGGL 231
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: Uncharacterized (protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6Q0_TRIAD) HSP 1 Score: 147 bits (372), Expect = 4.720e-39 Identity = 70/105 (66.67%), Postives = 85/105 (80.95%), Query Frame = 2
Query: 5 EAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
E ++ LQ VLD+GI+SLAVV LHSYTF +HERR+GK+A +MGF HVSLSSEVMPM++AVPRG+T DAYLTP I Y+ +F SGFD G +V+ LFMQSDGGL
Sbjct: 172 EELKSDLQKVLDKGISSLAVVLLHSYTFDEHERRIGKIAQQMGFEHVSLSSEVMPMLRAVPRGYTACVDAYLTPCIDEYIRNFTSGFDEGLKNVRVLFMQSDGGL 276
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: 5-oxoprolinase (n=1 Tax=Liparis tanakae TaxID=230148 RepID=A0A4Z2H1Y6_9TELE) HSP 1 Score: 140 bits (352), Expect = 1.460e-38 Identity = 71/106 (66.98%), Postives = 81/106 (76.42%), Query Frame = 2
Query: 2 LEAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
LE V L+ VL +GITSLAV+ LHSYTF+DHE+ VG LA +GFT VSLSSEVMPMV+AVPRG+T ADAYLTP I +Y+ F SGF G DV LFMQSDGGL
Sbjct: 167 LERVEKDLRGVLSRGITSLAVLLLHSYTFSDHEKAVGALARRLGFTQVSLSSEVMPMVRAVPRGYTVCADAYLTPKIHQYLKGFTSGFKGGLKDVDVLFMQSDGGL 272
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QAX7_SCYTO) HSP 1 Score: 138 bits (347), Expect = 3.190e-38 Identity = 66/106 (62.26%), Postives = 82/106 (77.36%), Query Frame = 2
Query: 2 LEAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
+E + G L VL +GI SLAVV LHSYTF+ HE+++G+LA +GF H+SLSSEVMPMV+AVPRG+T ADAYLTP I RY++ F +GF DV+ LFMQSDGGL
Sbjct: 82 MEQLEGQLLGVLSRGIQSLAVVLLHSYTFSTHEKQIGELAKRLGFKHISLSSEVMPMVRAVPRGYTACADAYLTPCIKRYLSGFCAGFQDNLKDVRVLFMQSDGGL 187
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: OPLA ((Fragment) n=4 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7ESZ4_9TELE) HSP 1 Score: 135 bits (341), Expect = 1.050e-37 Identity = 68/106 (64.15%), Postives = 81/106 (76.42%), Query Frame = 2
Query: 2 LEAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
LE V L+ VL +GI+S+AV+ LHSYT++DHE+ VG LA +GFT VSLSSEVMPMV+AVPRGFT ADAYLTP I +Y+ F +GF G DV LFMQSDGGL
Sbjct: 82 LEKVEKDLRGVLSRGISSVAVLLLHSYTWSDHEKAVGSLARRLGFTQVSLSSEVMPMVRAVPRGFTVCADAYLTPKIHQYLKGFTAGFKGGLKDVDVLFMQSDGGL 187
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: 5-oxoprolinase (n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DMA7_9ASCI) HSP 1 Score: 142 bits (357), Expect = 4.980e-37 Identity = 69/102 (67.65%), Postives = 80/102 (78.43%), Query Frame = 2
Query: 14 RGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
R LQ VL +GI SLAV +HSYT++DHE RVG++A MG THVSLSSEVMPMVK VPRGFT DAYLTP I +Y+ +F+SGFD+GF V LFMQSDGGL
Sbjct: 177 REDLQRVLSKGIKSLAVALMHSYTYSDHEVRVGEIAKSMGLTHVSLSSEVMPMVKIVPRGFTACVDAYLTPCIKQYLTTFQSGFDKGFKKVNVLFMQSDGGL 278
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: Uncharacterized (protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BUI7_9CHLO) HSP 1 Score: 141 bits (356), Expect = 6.800e-37 Identity = 73/105 (69.52%), Postives = 79/105 (75.24%), Query Frame = 2
Query: 5 EAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
E +R LQ VLD GITSLAVV H+ F +HER VG LA MGFT VSLS EVMPMVK VPRGFT AADAYLTP I RY+A F +GFD G DV+ LFMQSDGGL
Sbjct: 187 EGLRRDLQKVLDSGITSLAVVLKHAAIFPEHEREVGALARSMGFTQVSLSHEVMPMVKMVPRGFTAAADAYLTPHIRRYLADFTAGFDEGLKDVQVLFMQSDGGL 291
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: Uncharacterized (protein n=2 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3GQN2_CALMI) HSP 1 Score: 140 bits (354), Expect = 6.890e-37 Identity = 70/99 (70.71%), Postives = 79/99 (79.80%), Query Frame = 2
Query: 23 LQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
LQ VL +GI SLAVV LHSYT+ DHER+VG+LA +GF+HVSLSSEVMPMV+ VPRGFT ADAYLTP I RY+ FRSGF DV+ LFMQSDGGL
Sbjct: 50 LQQVLSRGIRSLAVVLLHSYTWPDHERQVGELARRLGFSHVSLSSEVMPMVRVVPRGFTACADAYLTPCIHRYLNGFRSGFQHSLRDVRVLFMQSDGGL 148
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Match: 5-oxoprolinase (n=1 Tax=Anolis carolinensis TaxID=28377 RepID=UPI0007DB6DB3) HSP 1 Score: 139 bits (349), Expect = 1.150e-36 Identity = 70/106 (66.04%), Postives = 83/106 (78.30%), Query Frame = 2
Query: 2 LEAVRGSLQAVLDQGITSLAVVFLHSYTFADHERRVGKLAGEMGFTHVSLSSEVMPMVKAVPRGFTTAADAYLTPVIARYVASFRSGFDRGFDDVKTLFMQSDGGL 319
L A+RG LQA+L++GITSLAVV LHSY + +HER+VG LA E+GF VSLSSEVMPMV+AVPRG+T ADAYLTP I RY+ SFR GF V +FM+SDGGL
Sbjct: 169 LGALRGELQALLERGITSLAVVLLHSYLWPEHERQVGSLAWELGFRQVSLSSEVMPMVRAVPRGYTACADAYLTPCIRRYLDSFRKGFASQLQGVPVMFMRSDGGL 274 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7168.15344.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7168.15344.1 >prot_E_fasciculatus_S2_contig7168.15344.1 ID=prot_E_fasciculatus_S2_contig7168.15344.1|Name=mRNA_E_fasciculatus_S2_contig7168.15344.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=107bp PGGRARQPPGRAGPGHHQPCRRVSAQLHVRGPRAARGQARGRDGVHARVAback to top mRNA from alignment at E_fasciculatus_S2_contig7168:2029..2982- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7168.15344.1 ID=mRNA_E_fasciculatus_S2_contig7168.15344.1|Name=mRNA_E_fasciculatus_S2_contig7168.15344.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=954bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7168:2029..2982- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7168:2029..2982- >mRNA_E_fasciculatus_S2_contig7168.15344.1 ID=mRNA_E_fasciculatus_S2_contig7168.15344.1|Name=mRNA_E_fasciculatus_S2_contig7168.15344.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=321bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7168:2029..2982- (Ectocarpus fasciculatus EfasUO2)back to top |