mRNA_E_fasciculatus_S2_contig710.15277.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig710.15277.1
Unique NamemRNA_E_fasciculatus_S2_contig710.15277.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAS9_ECTSI)

HSP 1 Score: 944 bits (2441), Expect = 0.000e+0
Identity = 500/581 (86.06%), Postives = 517/581 (88.98%), Query Frame = 1
Query:  214 VVMAEEEDVPPSTSLLG-ISSNQNHHGQRQQQCKRCILQDNRRFRSLRDQKTRPLCLTSTSLEY-AGSGKADSTMLVLNLADVVGAKAEPVPASGAGERAGGGINGRGGIVHQLQVFAYVPSGEGKETGCTARGGVCRKNKRRAAHQTWLVSDSDTAQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSASFLAAKGQTKAMDLLPTESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQQHVWRKAANVFCSPDDDAEKSPA 1950
            VVMA E DVPPSTSLLG               CKRCILQD+R FRSLRD KTRPLCLTSTSLEY A SGK DS  L+L+LADVVGAKA P PASG G+RAGGGINGRGGIVHQLQVFAYV SGEGKE GCT RGG CRKNKRRA HQTWL SD DTAQ WATEINNRLRQSQG+EE LERG RGPGRRLLVLVNPVSGTGESRSTWEKTLRPML+QAMTT  VVFSTRRGELAEIITNAGDNSS+        XXXXXX STVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFG VSASFLAAKGQTKAMDLL TES DKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRI +LKHYRGRISFLPDLDAAAA       N + SAPFRMPPLSEPVH+DGAGS+S+AA APALEGWTSVEGEFILADMTQ SHIAHDMPMAPHSR+GDGL+DLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGR+TVDGELVDYAPLQQHVWRKAA+VFCSPDDDAE+ PA
Sbjct:   24 VVMAVE-DVPPSTSLLGSXXXXXXXXXXXXXXCKRCILQDDRSFRSLRDHKTRPLCLTSTSLEYYAASGKEDSAPLILSLADVVGAKAGPAPASGGGQRAGGGINGRGGIVHQLQVFAYVASGEGKEMGCTGRGGPCRKNKRRATHQTWLASDPDTAQHWATEINNRLRQSQGREEDLERGNRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLEQAMTTANVVFSTRRGELAEIITNAGDNSSTDATRGASAXXXXXX-STVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGAVSASFLAAKGQTKAMDLLLTESADKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIANLKHYRGRISFLPDLDAAAATTPTPSKNASASAPFRMPPLSEPVHQDGAGSESAAAGAPALEGWTSVEGEFILADMTQASHIAHDMPMAPHSRIGDGLIDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRITVDGELVDYAPLQQHVWRKAAHVFCSPDDDAERLPA 602          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: DAGKc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYI4_9PHAE)

HSP 1 Score: 508 bits (1307), Expect = 1.570e-169
Identity = 273/320 (85.31%), Postives = 279/320 (87.19%), Query Frame = 1
Query:  346 SLRDQKTRPLCLTSTSLEYAGSGKADSTMLVLNLADVVGAKAEPVPASGAGERAGGGINGRGGIVHQLQVFAYVPSGEGKETGCTARGGVCRKNKRRAAHQTWLVSDSDTAQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSASFLAAKGQTKAMDLLPTESGDKKYLAFLNVGWGMI 1305
            SLRD+KTRPLCLTSTSLEYA SGKADS  L L+LADVVGAKA P P SG G  A GGIN  GGIVHQLQVFAYV SGEGKETGCT RGG CRKNKRRAAHQTWL SD DTAQ WATEIN RLRQSQG+EEGLE GKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPML+QAMTTVTVVFSTRRGELAEIITNAG+NSS+               S VGSL DLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVP GSGNGLAKTVSVESGEWFG VSASFLAAKGQTKAMDLL TESGDKKYLAFLNVGWGMI
Sbjct:   10 SLRDRKTRPLCLTSTSLEYAASGKADSAPLTLSLADVVGAKAGPAPPSGGGG-ARGGINRGGGIVHQLQVFAYVESGEGKETGCTGRGGPCRKNKRRAAHQTWLASDPDTAQHWATEINKRLRQSQGREEGLEGGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLEQAMTTVTVVFSTRRGELAEIITNAGENSSTDGARGASAGRGGGR-SIVGSLGDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPTGSGNGLAKTVSVESGEWFGAVSASFLAAKGQTKAMDLLLTESGDKKYLAFLNVGWGMI 327          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase 2 n=1 Tax=Xenopus tropicalis TaxID=8364 RepID=A0A803KCE5_XENTR)

HSP 1 Score: 228 bits (582), Expect = 5.600e-63
Identity = 144/392 (36.73%), Postives = 210/392 (53.57%), Query Frame = 1
Query:  766 RRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESG--EWFGT---VSASFLAAKGQTKAMDL--LPTESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFR--MPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQQHVWRKAANVF 1914
            RRL++LVNP  G G +    +  + PML +A  +  ++ + R+    E++                            SL+  DGI+V+ GDG  +EV+ G+  RPD    + ++ +GI+P GSGN LA  ++  +G     G+   ++   L  +G    MDL  L T SG + + +FL+V WG ISDVDIESE YR MGS RFTVGT+VR+ SL+ YRGR+S+LP LDA          +   + P    +P L +P+ ++                W  VE  F+L      SH+  D+  AP S   DGL+ LFF+K G SR A++++FLAMEKG H     P ++   VRAFR+EPLT  G +TVDGE V+Y P+Q  + +  +N+ 
Sbjct:   25 RRLMLLVNPCGGRGNALQQCQSHILPMLTEAEISYNLIQTERQNHARELVQGI-------------------------SLEQWDGIIVISGDGLLYEVINGLMERPDWEDAI-KMPVGILPCGSGNALAGAINYNAGYEHAMGSELLLNCILLLCRGTVIPMDLVSLTTCSGIRSF-SFLSVAWGFISDVDIESEKYRHMGSARFTVGTMVRVASLRTYRGRLSYLPVLDAHRPICRSITLHHQVNGPKDDLLPSLGQPLPKN----------------WIIVEDNFVLVLAIYQSHLGADLFTAPFSTFDDGLIHLFFVKAGISRAALVRLFLAMEKGTHFETECPYLTHIPVRAFRLEPLTRKGIITVDGERVEYGPIQAQIHKGLSNLI 373          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase 1 n=6 Tax=Nothobranchiidae TaxID=405002 RepID=A0A1A8APG7_NOTFU)

HSP 1 Score: 229 bits (585), Expect = 5.370e-62
Identity = 152/441 (34.47%), Postives = 233/441 (52.83%), Query Frame = 1
Query:  631 RRAAHQTWLVSDSDTAQQWATEINNRLRQSQGQEEG-LERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGT-----VSASFLAAKGQTKAMDLLPTE-SGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAP-----FRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTS-SGRLTVDGELVDYAPLQQHVWRKAANVF 1914
            R +AHQ    +D + A++WA  +  R  + Q   +G L R    P R +++LVNP SG G++ + +   ++ ML++A    T++ + ++G   EI+  A                          L  LD +V++ GDG  FEV+ G+  RPD    + +  LGI+P GSGN LA ++   SG    +     VS  FL  KG    MDL+  + S   +  +FL++ WG ++DVD+ESE YR MG+ RFT+GT+VR+ SL+ Y+G++++LP            PS   T AP       +PPL +P+         +  V P        E +F+L      SH+A D+  AP SRL DG++ LF++  G SR A++++FLAMEKG H++     +   +VRA R+EP T   G++TVDGE+V Y P+Q  V R  + V 
Sbjct:  108 RLSAHQD-PRADLEEAEKWARAVLERSARQQAPRDGMLLRSWSHPDRTMMLLVNPQSGKGQALTFYYNHVQRMLNEAGIAHTLIITEKQGHAREIVREA-------------------------DLTQLDALVILSGDGLLFEVINGLVERPDWEEAIQK-PLGILPGGSGNALAASLLYYSGAPPVSGEDLLVSCGFLLCKGSVSHMDLVSIQLSSGPRLFSFLSLAWGFVADVDVESEKYRHMGAARFTIGTLVRLASLRVYKGKLAYLPASGEEGDLENSTPSQRATEAPRGPPDSLLPPLDQPL-------PGNWVVVP--------EEDFVLMLAMYQSHLAEDLLAAPESRLDDGIIHLFYVTAGISRTALLRLFLAMEKGTHLASNCQHLVHTKVRALRLEPNTGLKGKITVDGEVVQYGPVQAEVHRGLSRVI 506          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase 2 n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5PW20_9ANUR)

HSP 1 Score: 222 bits (566), Expect = 1.210e-60
Identity = 135/378 (35.71%), Postives = 202/378 (53.44%), Query Frame = 1
Query:  766 RRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESG--EWFGT---VSASFLAAKGQTKAMDLLP-TESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQ 1881
            RRL +L+NP  G G +       + PM+ +A  +  ++ + R+    E++                            +L++ DGI+V+ GDG  +EV+ G+  RPD    + ++ +GI+P GSGN LA  ++  +G  +  G+   ++   L  +G    MDL+  T     +  +FL+V WG ISDVDIESE YR MGS RFTVGT+VR+ SL+ Y+GR+S+LP LD           ++       +PPL +PV +                 W ++E +F+L      SH+  D+  AP S + DGL+ LFF+K G SR +++++FLAMEKG HI    P +     RAFR+EPLT  G LTVDGE V+Y P+Q
Sbjct:   40 RRLFLLLNPCGGRGNAFQQCHSHILPMITEADISYNLIQTERQNHARELVQGI-------------------------NLEEWDGIIVISGDGLLYEVINGLMERPDWEDAI-KMPVGILPCGSGNALAGAINYNAGFEQAMGSELLLNCILLLCRGTVMPMDLVSVTTCSGTRCFSFLSVAWGFISDVDIESEKYRHMGSARFTVGTMVRVASLRTYKGRLSYLPVLDGHRPILNGPKDDL-------IPPLGQPVPKT----------------WVTLEEDFVLVLAIYQSHLGADLFTAPFSSINDGLIHLFFVKAGISRASLVRLFLAMEKGNHIEMECPYVVHVPARAFRLEPLTQKGILTVDGEQVEYGPIQ 368          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase 1 n=1 Tax=Nothobranchius furzeri TaxID=105023 RepID=A0A8C6NTF8_NOTFU)

HSP 1 Score: 221 bits (563), Expect = 1.810e-60
Identity = 139/397 (35.01%), Postives = 212/397 (53.40%), Query Frame = 1
Query:  760 PGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGT-----VSASFLAAKGQTKAMDLLPTE-SGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAP-----FRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTS-SGRLTVDGELVDYAPLQQHVWRKAANVF 1914
            P R +++LVNP SG G++ + +   ++ ML++A    T++ + ++G   EI+  A                          L  LD +V++ GDG  FEV+ G+  RPD    + +  LGI+P GSGN LA ++   SG    +     VS  FL  KG    MDL+  + S   +  +FL++ WG ++DVD+ESE YR MG+ RFT+GT+VR+ SL+ Y+G++++LP            PS   T AP       +PPL +P+         +  V P        E +F+L      SH+A D+  AP SRL DG++ LF++  G SR A++++FLAMEKG H++     +   +VRA R+EP T   G++TVDGE+V Y P+Q  V R  + V 
Sbjct:   18 PDRTMMLLVNPQSGKGQALTFYYNHVQRMLNEAGIAHTLIITEKQGHAREIVREA-------------------------DLTQLDALVILSGDGLLFEVINGLVERPDWEEAIQK-PLGILPGGSGNALAASLLYYSGAPPVSGEDLLVSCGFLLCKGSVSHMDLVSIQLSSGPRLFSFLSLAWGFVADVDVESEKYRHMGAARFTIGTLVRLASLRVYKGKLAYLPASGEEGDLENSTPSQRATEAPRGPPDSLLPPLDQPL-------PGNWVVVP--------EEDFVLMLAMYQSHLAEDLLAAPESRLDDGIIHLFYVTAGISRTALLRLFLAMEKGTHLASNCQHLVHTKVRALRLEPNTGLKGKITVDGEVVQYGPVQAEVHRGLSRVI 373          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: sphingosine (kinase 1 n=1 Tax=Polyodon spathula TaxID=7913 RepID=UPI001B7E0C7B)

HSP 1 Score: 223 bits (569), Expect = 1.410e-59
Identity = 155/441 (35.15%), Postives = 229/441 (51.93%), Query Frame = 1
Query:  676 AQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSA-------SFLAAKGQTKAMDLLP-TESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGA--------GSDSSAAVA-----------------PALEGWTSVEGE-FILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQQHVWR 1896
            A++WA  I +   Q   ++EG          RLLVLVNP SGTG +   +   ++ ML +A    T++ + R+    E++  A                          L   D +VV+ GDG  FEV+ G+ AR D    + R  LGI+P GSGN +A +++  SG    T+S+       +FL  KG    +DL   T +  K++ +FL+V WG +SDVDIESE YR MG+ RFTVGT++++ +L+ YRGR+++LP  +  A        ++   A  R  P   P   + A         S++S  V                  P    WT V+ E F+L  +   SH++ D+  AP + LGDGL+ LF+++ G SR A++++FLAMEKG H+  R P +S+  VRAFR+EP T  G +TVDGE V+Y P+Q  V R
Sbjct:  112 AEKWAQAIQDSSIQQLPKQEGQLYSLLPRPCRLLVLVNPHSGTGHALPLFHSHVQGMLTEAGAQYTLLVTERQNHARELLQEA-------------------------DLSQWDALVVLSGDGLLFEVVNGLMARADWEDAV-RKPLGILPGGSGNAVATSINHYSGRQ--TLSSKELLLNCTFLLCKGLVSPLDLASVTTASGKRHFSFLSVAWGFVSDVDIESEKYRLMGAARFTVGTLMQLAALRVYRGRLAYLPAQELPAPGLAEGSPDLPGGASLRCLPGKTPSESNRAPHTLYNSSNSNNSGKVPSLGVQGPADVLLAPLDQPVPAHWTMVKEEHFVLVLVVYQSHLSQDLLAAPAATLGDGLLHLFYVRAGISRAALLRLFLAMEKGTHLELRCPHLSYVPVRAFRLEPYTPKGVITVDGEAVEYGPIQVQVHR 524          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: ATP-NAD (kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEA1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.610e-59
Identity = 160/416 (38.46%), Postives = 212/416 (50.96%), Query Frame = 1
Query:  769 RLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITN----AGDNSSSXXXXXXXXXXXXXXXSTVGSLD--DLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSASFLAAKGQTKAMDLLP-TESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHS---------------------RLGDGLMDLFFIKKGA-SRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSS--GRLTVDGELVDYAPLQQHVWRKAANVFCSP 1923
            +LLV V+PVSG G+  S W KTL+P+LDQA    TV+ + R+    +I+      A D+                     G +D    D + V+GGDG  FEVLQG+  R DCA QL RL+L +VP+GSGNGL  TV   SGE    +SASF+ A+GQ +A+D+   T S  K YLA L+ GW M SD+D   E  RWMG+ RF V     I   + YR RIS+LP      A     P   T   P  +P L EP+     GS            W +VEG F L   +Q SHI+ D  + P S                     RLGDG + L +I++ A  R A++  FLA+ +G H+S     +   R RA R+EPLT+   G   +DGE ++Y  LQQ +  +AANV C P
Sbjct:  224 KLLVFVSPVSGRGKGWSVWTKTLQPVLDQAGAAYTVIKTQRQHHARDIVAGKAGLADDDVRGNAREALVSANGGGNVPASGDVDVAAYDTVAVIGGDGMLFEVLQGLQRRSDCAAQLRRLNLAVVPSGSGNGLCHTVLAASGEAVSALSASFVVARGQPRAVDVSRVTTSAGKTYLALLSQGWAMFSDLDFGLEGCRWMGASRFDVAIGGCIARFRSYRARISWLP------ADPLAPP---TAFEPDAVPALGEPL-----GS-----------AWHTVEGNFTLYLTSQVSHISGDGCVDPASQKAGVVAVXXXXXXXXXXXXXRLGDGTLQLMYIERQAMGRMAVLNFFLAIPEGKHLSKEG--VKAVRCRAVRLEPLTNRHVGMHALDGERIEYGALQQVILPRAANVLCGP 612          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: Sphingosine (kinase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9PTD6_9CYAN)

HSP 1 Score: 221 bits (563), Expect = 1.650e-59
Identity = 139/434 (32.03%), Postives = 225/434 (51.84%), Query Frame = 1
Query:  619 RKNKRRAAHQTWLVSDSDTAQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSASFLAAKGQTKAMDLLPTESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQQHVWRKAANVFCS 1920
            +K +R      +      T  +W   INN L   + +EE          RRL +L+NP SG  + R  +E  +RP+L+++    TV+ ++ RG+  EI+                             L ++DG+ +VGGDGT  EV+ G+ +R D    +    +G +PAG+ NGL+KT+S  SGE +  +SA+F  AKG+ + +DL   E   +++ AFL++ WG+I+DVDIES+  R++G +R  +  ++RI +L+ Y+GR SFL                +T   P  + P ++P              A     W ++E EFIL      +   +D+  AP ++L DG MD+  +++G S+  ++   L   KG HI    P + +++V +FR+EPLTS G L VDGE VDY+P+Q  +++  A VFC+
Sbjct:   91 KKPRRELQEYEFACESVATRSRWIKAINNILSGGRAEEEETL-----APRRLQILLNPQSGQKKGRQIFEA-VRPLLEKSYLQFTVIETSYRGQAREIVREM-------------------------DLSEVDGLAIVGGDGTIHEVINGLTSRADWEEAILT-PIGTIPAGTSNGLSKTLSEISGEPYDPISATFAIAKGKVRPLDLAIAEQNGRRFSAFLSLAWGLIADVDIESDKMRFLGPIRTDLYALMRIWNLRAYKGRFSFL----------------LTADTP--LDPTTDPA-------------ANQENKWQAIEDEFILFWAMNVTWATYDIKAAPDAQLSDGAMDVLVVRRGVSKLELLSALLKSAKGEHIF--LPSVEYYKVCSFRLEPLTSRGILAVDGEPVDYSPIQLQIYKGMARVFCT 459          
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Match: sphingosine (kinase 1-like n=2 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4D387_9TELE)

HSP 1 Score: 221 bits (563), Expect = 3.430e-59
Identity = 142/422 (33.65%), Postives = 223/422 (52.84%), Query Frame = 1
Query:  670 DTAQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVSGTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSXXXXXXXXXXXXXXXSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQLSRLSLGIVPAGSGNGLAKTVSVESGEWFGT-----VSASFLAAKGQTKAMDLLPTE-SGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKHYRGRISFLPDLDAAAAXXXXXPSNVTTSAPFRMPPLSEPVHRDGAGSDSSAAVAPALEGWTSV-EGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFIKKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTVDGELVDYAPLQQHVWRKAANVF 1914
            + A++WA  +  R  Q Q   +G+         R+L+LVNP SG G++ + ++  ++ +L +A  ++T++ + R+    E +  A                          L   D IV++ GDG  +EV+ G+  R DC   + +  LGI+P+GSGN LA +V   SG    T     +S  FL  +GQ   MDL+    S   +  +FL++ WG ++DVD+ESE YR +G+ RFTVGT+VR+ SL+ Y+GR+++LP            PS++      ++PPL +PV  D                W  V E +F+L      SH+A D+  AP +R  DG++ LF++K G SR A++++FLAMEKG H+      +   +VRA R+EP +  G +TVDGE+V++ PLQ  V R  A + 
Sbjct:  122 EEAEKWARAVRERSAQQQALRDGVSLHSLPRPCRMLLLVNPQSGKGQALTLFKNHIQRLLSEAGVSLTLITTERQDHAREHVKEA-------------------------DLSQWDAIVIMSGDGLLYEVVNGLLERSDCEEAI-QTPLGILPSGSGNALAASVHYYSGAPPVTNEELLLSCGFLLCQGQVSRMDLVSVHLSSGPRLFSFLSLAWGFVADVDVESEKYRHLGAARFTVGTLVRLASLRVYKGRLAYLP--------ASGEPSDL------QLPPLDQPVSGD----------------WVVVPEEDFVLVLAMYQSHLAEDLLAAPGARPDDGVIHLFYVKAGISRAALLRLFLAMEKGTHLDTNCQHLVHAKVRALRLEPRSPEGIITVDGEVVEHGPLQAEVQRGRARII 487          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig710.15277.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Sphingosine0.000e+086.06kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 R... [more]
DAGKc1.570e-16985.31domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Sphingosine5.600e-6336.73kinase 2 n=1 Tax=Xenopus tropicalis TaxID=8364 Rep... [more]
Sphingosine5.370e-6234.47kinase 1 n=6 Tax=Nothobranchiidae TaxID=405002 Rep... [more]
Sphingosine1.210e-6035.71kinase 2 n=1 Tax=Leptobrachium leishanense TaxID=4... [more]
Sphingosine1.810e-6035.01kinase 1 n=1 Tax=Nothobranchius furzeri TaxID=1050... [more]
sphingosine1.410e-5935.15kinase 1 n=1 Tax=Polyodon spathula TaxID=7913 RepI... [more]
ATP-NAD1.610e-5938.46kinase-like domain-containing protein n=1 Tax=Trib... [more]
Sphingosine1.650e-5932.03kinase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=26077... [more]
sphingosine3.430e-5933.65kinase 1-like n=2 Tax=Austrofundulus limnaeus TaxI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig710contigE_fasciculatus_S2_contig710:15561..23949 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score952.6
Seed ortholog evalue9.4e-275
Seed eggNOG ortholog2880.D8LAS9
Model size3034
KEGG rclassRC00002,RC00017
KEGG koko:K04718,ko:K11502
KEGG ReactionR01926,R02976
KEGG Pathwayko00600,ko01100,ko04020,ko04071,ko04072,ko04370,ko04371,ko04666,ko05152,map00600,map01100,map04020,map04071,map04072,map04370,map04371,map04666,map05152
KEGG ModuleM00100
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.D-erythro-sphingosine kinase activity
EggNOG OGsCOG1597@1,KOG1116@2759
Ec32 ortholog descriptionSphingosine kinase
Ec32 orthologEc-27_006490.1
EC2.7.1.91
Cds size1917
COG Functional cat.I
BiGG ReactioniRC1080.CRv4_Au5_s12_g3675_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig710.15277.1prot_E_fasciculatus_S2_contig710.15277.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig710 16706..23901 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842372.1942232-UTR-E_fasciculatus_S2_contig710:15560..161921696842372.1942232-UTR-E_fasciculatus_S2_contig710:15560..16192Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig710 15561..16192 -
1696842372.209083-UTR-E_fasciculatus_S2_contig710:16268..167051696842372.209083-UTR-E_fasciculatus_S2_contig710:16268..16705Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig710 16269..16705 -
1696842372.347101-UTR-E_fasciculatus_S2_contig710:23901..239491696842372.347101-UTR-E_fasciculatus_S2_contig710:23901..23949Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig710 23902..23949 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842372.2207818-CDS-E_fasciculatus_S2_contig710:16705..169391696842372.2207818-CDS-E_fasciculatus_S2_contig710:16705..16939Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 16706..16939 -
1696842372.2319474-CDS-E_fasciculatus_S2_contig710:17261..173721696842372.2319474-CDS-E_fasciculatus_S2_contig710:17261..17372Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 17262..17372 -
1696842372.2433536-CDS-E_fasciculatus_S2_contig710:17931..180841696842372.2433536-CDS-E_fasciculatus_S2_contig710:17931..18084Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 17932..18084 -
1696842372.2545516-CDS-E_fasciculatus_S2_contig710:18844..190041696842372.2545516-CDS-E_fasciculatus_S2_contig710:18844..19004Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 18845..19004 -
1696842372.2729514-CDS-E_fasciculatus_S2_contig710:19903..200521696842372.2729514-CDS-E_fasciculatus_S2_contig710:19903..20052Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 19904..20052 -
1696842372.2919073-CDS-E_fasciculatus_S2_contig710:20381..204831696842372.2919073-CDS-E_fasciculatus_S2_contig710:20381..20483Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 20382..20483 -
1696842372.3045678-CDS-E_fasciculatus_S2_contig710:20868..210851696842372.3045678-CDS-E_fasciculatus_S2_contig710:20868..21085Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 20869..21085 -
1696842372.3157747-CDS-E_fasciculatus_S2_contig710:21540..217681696842372.3157747-CDS-E_fasciculatus_S2_contig710:21540..21768Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 21541..21768 -
1696842372.3288844-CDS-E_fasciculatus_S2_contig710:22206..224731696842372.3288844-CDS-E_fasciculatus_S2_contig710:22206..22473Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 22207..22473 -
1696842372.338026-CDS-E_fasciculatus_S2_contig710:23605..239011696842372.338026-CDS-E_fasciculatus_S2_contig710:23605..23901Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig710 23606..23901 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig710.15277.1

>prot_E_fasciculatus_S2_contig710.15277.1 ID=prot_E_fasciculatus_S2_contig710.15277.1|Name=mRNA_E_fasciculatus_S2_contig710.15277.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=639bp
MNPLPCTRRSQEAPQEQHLSSTTGRVRMPGRLRRLVCCFSLCNLGWLHQA
GLAVPVVMAEEEDVPPSTSLLGISSNQNHHGQRQQQCKRCILQDNRRFRS
LRDQKTRPLCLTSTSLEYAGSGKADSTMLVLNLADVVGAKAEPVPASGAG
ERAGGGINGRGGIVHQLQVFAYVPSGEGKETGCTARGGVCRKNKRRAAHQ
TWLVSDSDTAQQWATEINNRLRQSQGQEEGLERGKRGPGRRLLVLVNPVS
GTGESRSTWEKTLRPMLDQAMTTVTVVFSTRRGELAEIITNAGDNSSSGD
AARSASAGGGGGGSTVGSLDDLDGIVVVGGDGTFFEVLQGMYARPDCARQ
LSRLSLGIVPAGSGNGLAKTVSVESGEWFGTVSASFLAAKGQTKAMDLLP
TESGDKKYLAFLNVGWGMISDVDIESEAYRWMGSLRFTVGTIVRIVSLKH
YRGRISFLPDLDAAAATTTTTPSNVTTSAPFRMPPLSEPVHRDGAGSDSS
AAVAPALEGWTSVEGEFILADMTQTSHIAHDMPMAPHSRLGDGLMDLFFI
KKGASRFAMIQMFLAMEKGGHISPRFPCISWHRVRAFRIEPLTSSGRLTV
DGELVDYAPLQQHVWRKAANVFCSPDDDAEKSPASSET*
back to top

mRNA from alignment at E_fasciculatus_S2_contig710:15561..23949-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig710.15277.1 ID=mRNA_E_fasciculatus_S2_contig710.15277.1|Name=mRNA_E_fasciculatus_S2_contig710.15277.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8389bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig710:15561..23949- (Ectocarpus fasciculatus EfasUO2)
GGGACCGTGCGTTTTCTCCCGCCCCAGAGAAAAAGCCTTCCTCGCAACAT GAACCCTCTGCCGTGCACTCGGCGCTCGCAAGAGGCTCCGCAAGAGCAGC ATCTCTCCAGCACGACAGGACGCGTGCGCATGCCCGGGAGACTTCGACGA CTGGTGTGCTGTTTTTCCTTGTGCAACCTTGGTTGGTTGCACCAAGCAGG GCTTGCTGTACCAGTCGTCATGGCGGAGGAGGAGGATGTCCCCCCGTCGA CGTCTTTGCTGGGCATCAGCAGCAACCAGAACCATCACGGGCAGAGGCAG CAGCAGTGCAAGCGGTGTATTCTACAAGACAATCGACGCTTCAGGTATGG TGATGGATAGATGTATTTGCATCTCGTATATCGGGGATACCTATTGAGCA CCATTGATTGATTTGCTCGATTTAGTGTGATATGGTCTGTCCGATCTCGA CGGAAACCACGCGATCCTTGGCGGGTTCCAGGATCGGCATCGCTCGGAGG ACCTGGCGTTAGGGTATCGTACAGTAGAGGGGATACTACTGCTGTTTCTC TCCCATATAGACCCAAGGCCAAAGATCTCCGCGCTGGGATCTGTATAGTC GTAGGGTCGGGTTACGGTCCTGGTGTTTCGAATTTTTTTAGCCCTTGCAG CTGTGATGGAAAACCGATGTCGTTGACTTTACACCAAGTTGAGAAACTAC CGACATACGATGCATTTGGTACACACGAGATGCGTGTAAGCCCCAGATAG GACGTGCTCCGCAAGAAAAAATCCCGACGGTCGTCGCACATGGCAAGGTT GGGACTTAGGTACTTCTTTACCAGCGTATCACGCAGCTAGCGAGGTCTAC CTCACCTTCTCTCAAATCAAGACCATATATTCCGTTGCTACTCGTGCCAC CGCGCACTTCGCTGCTCCGTGGATGTCCTCGTCTGGAATTGATGCTCAAT TTGGGACTCCGCAAGGCAATGGCCTTCGCAAGGCAATGGCCCTATTGGAG TACCCGCCTTGTCACATGTTTTGCCTTGAAAGAAAAGGAGCGGTGGAGTG TTTTGTCTTGGTTTGAGAGAACGTGTGTGCATGTCGACTATTAGTAATAA AATGCTGTTCCAGGCTTGTTTGTTGCACAACACTTCCCAACTGGTCGTTA AGTCTCGCCTGCATATATGGTTGGGTGCTCCTCCCTCGGTAGGTACGAAA TCAATCAAATCAAGATCGATTGTTGAAAACCCTCAACAACCAAGTTCTTG AGTAGTGGAGCGGTTTGAGACCTTCTTTGTTCGTAGGCGCGTGGGGTAAA AACCGATGTTACCCCTCTGGCTCCGCTTTGCATGGGATTGTCCTGCGAGT GCTCTGCCTTGCAACACATACCCATCACCCAAGTTTGGCAAACGCGACGG TAGGGCTTCGCGCACAACACCGCGGCTCGAGCCGATTTTTTGCCTGCCCC GACTACTTGTAATTCCCACCGACCAGGTCGCTGCGAGACCAGAAGACCAG GCCATTGTGCTTGACCTCAACCTCCCTCGAGTATGCCGGCAGCGGCAAAG CAGATTCAACGATGCTAGTACTGAACCTTGCGGACGTTGTCGGAGCCAAG GCGGAACCCGTTCCCGCCTCGGGCGCAGGAGAACGAGCGGGGGGGGGTAT CAACGGGCGTGGGGGCATCGTGCACCAGTTGCAGGTCTTCGCGTACGTCC CGAGCGGCGAGGGCAAGGAGACGGGGTGCACTGCCAGGGGCGGGTGAGTT CGATATGCGTATTGTCTGCTTGTAGCGGAAACTCCTGCCCCTGCCTAGTA GTAGCTCAAGCCTTGAAGCGGTGGGCGGAGGTACAAGGGTTCCTTCGAGC CCTCTTCCCCTGCTGCCGCACGACTCGCGTTGTGGGTTTTGATCGCACCA TCTAGTCTCGCAAGTTGAAAACAGCATGGGTTGTTGCCTGTCCTTGATAT AGCCGTTCCTCAGGCTGAGGGGGCACCTGGAGCATGAACTCTCCTTCACG AGGAGATTTCCGGCCAATGAAATTCATTTTGCGACCACCCTTTGGGCAAT ACTACCAGATGGCACCACCATTTGAGATACATGTCGACTCCATTCCAAAC GTGCCCCCCTTTCTCGCTTGTTTTTTCTTGCTTCCCTTCCCTTCCTTCCC CCCTCCGTCCCGCCCCGTCCTTTGGGAACAGGGTATGTCGAAAAAACAAG CGAAGAGCCGCCCATCAGACGTGGCTGGTGTCCGATTCTGACACGGCTCA GCAGTGGGCCACGGAGATCAACAACCGTCTCAGGCAGAGCCAAGGGCAGG AGGAAGGCCTGGAGAGAGGGAAGAGAGGGCCAGGGCGACGACTGCTGGTC TTGGTCAACCCGGTCAGTGGAACGGGGGAATCGCGGTCTACCTGGGAGAA GACCCTCAGGTCGGTTGTAGGGAACTGACTCCACGCGCGATCGTTGGGTG TTTTCCTTTTGACTGTATCGGGTTGGACTACGATAAGAGGAGTGCGTTGA ACGCGCCCGTGGTCTGCGAAGGATGGCGTGTGTGTAGGGGTTGCGCGTTA GTTGTCTCCCTGCCGGCGAAACGATTTTAGAGAACGCTCCAACTCTTTCA GACTCCGTTTTACGCCTTTTGATCACGAATACACGCGCCTGCTGTCGCTT CGTACACAACAAAGACAGGGCCGTTTCCAACCAGTCTAGTCGCGCTTCGA TAAGTGTAAGGTACGGCTGCAGCAGCAGCCCTACGCCCCGCTTCTTGATG CTGCCTCATGGTATTGTTATTTAGCTCCTCTGGACCTCTCCACTTGGAAT AACTTCTCCATGAACCGTCCACGGTGGCCAACCACGCGTTCCGAAACCCC GACGCCAAAACAAGGCCGATGCTGGACCAAGCCATGACTACCGTCACCGT AGTCTTCTCCACACGACGGGGCGAGCTAGCGGAGATCATCACGAACGCTG GCGACAACAGCAGCAGCGGCGATGCAGCGAGGAGCGCATCAGCCGGGGGG GGGGGTGGCGGCTCGACAGTGGGAAGCTTGGACGATTTGGACGGCATCGT GGTCGTCGGAGGGGATGGCACCTTCTTCGAGGTACGTATGCTTCTTTCAT GTATATATATATGTGCGTGTTGCTGCCATGCTCCGGAGACGTTTTGTTGG TGGCGTTGATTTCAGGAGGGGAACGGGAGCCTGGTGTTTGTTGGTTGGAA GGACCCAGAATGGCGAAGAAAGCCGTGATTCGCAAGACCACGTCTCATAG CGTTGCTTAACATGTTACCAGACTAATATTCCAGACCGTCGTTCCCCGGC TCGAATTAACCTCCCCAGTCTTAAAGGACCGACTGGTCAGCCCTGTCTTT CTGCGCCCTACTTGTAGCTGCTACGGGATGAACCCAAGAAGTCACCCTTT TTGCGTGAGTCCAACGAGTTTCACTCCTGTGTTCTACTGCATGTGGTCCT TGCGTGGTGCGATCAGGTCCTTCAGGGCATGTACGCCCGGCCGGACTGTG CGAGGCAACTGTCGAGGCTGTCCCTAGGCATCGTGCCCGCGGGATCAGGA AACGGCTTAGCCAAGACGGTGAAAGCGGCATGATCGTCATGGACGTATGC GTTCGTTGGTGTGTTTTTCTCAATTCTTGGGGGACACAAATCGATTGAAA CAGACATAACGAACGCACGCTCGGGGGCTCCGTGCTTGCAAAGCCTTCCC TCGTGTACACTGAACCCGACAACCCCGCGATCGAGTGTGCTACACCTTGT TCAAGCTGCTGCTGGGGGCAGGCCATGCCAAGAGCAGCCCGTAGCTCACG ACTTCGGACCAAGCATGAAACGCCAATTCCCCTGTCCCTCGTCAACTACC ATCCCCTCATGAAATTGAAACTGCGAGCGGTCTGCCGTGTGCAACAGGTG AGTGTGGAGTCCGGAGAATGGTTCGGCACGGTTAGCGCGTCCTTTCTCGC TGCCAAAGGCCAGACGAAAGCGATGGACCTGCTTCCCACCGAATCGGGAG ACAAGAAATACCTGGCATTCCTCAACGTCGGGTGGGGCATGATCAGGTGA AAAAATTGTTGCCAGACAGGATTCACCAGAGCAGAATGAAACCTCCAAGG GCAACAGGACTTTTTAAGCTCTACCTCCCCGACAAACCCTTAGTGCGCAT GCTGTAGAGAAGGGTGCTCCTTCCTATTTTGTTTGATCCTCAAGGCACGC GCATTCACTCCGCGTGTTCCTACGTGCTATGTGTCATGTGGTTGCACTAG GAGATGTATCTACTTGTCCCTGTGTCATGGTCTGTGGAAGAAGGTTCCTC GGAATTGTTTCCGCAAACAACACAAGTCAGGTTCCATGTGGCAGCGCGTA CTCTTCATCCACCTCTTGTGTTTACGTGTCTTCCACAGAAAAGAGTCCGG GGTCGATAAGCAATAAGCTCCAATATGGCACCAGCGGTCCTTCACCCTTC GCTACCGATGCGGTGCCGTGGAAGCTCATGCTTGCCTCACCCCATTGTCT ACACGAGGCATACGGTCGGCACATCGTTGGCACATCGTTGGCACATGTAG ATACCTAGCCTAGGTGACGAACACATCTTCTCTTGGGGAAACGCCTCAGC AACGACCGCCGTATGCTTTCGCAATGCCCCAGCCGGTCGAAGTGTGTGCG AAGGAAGCACAACAGATGGTCCGACATAGTGTTTAGGTCACATTTATTTT ATTTGTACTGTGGTAACACGAGAGATAGTACACCCACAAAGGCTACAACG ACCCCCACGGGATACGATACCCGACCATGATGTCGCGGCATAGCATGAGA GCGAAACATAGAATGCCCATGCACTCAAACGTTGTGTTTTCTTAGGGCAC GCCACGCCAGTGCTGGAGTCCAGCTGACGTATTTATAGACACGTACCCCC TCATCCCCTCGCCCCCTACATGCCGATACGCCCCCTCCTTCTCAGCGATG TCGACATCGAATCGGAGGCTTACCGTTGGATGGGGTCTCTTCGATTCACC GTCGGGACCATCGTACGCATCGTCAGCCTCAAGCACTACAGGGGACGGAT AAGCTTTCTCCCCGACCTGGATGCCGCTGCCGCCACCACCACTACAACTC CTTCGGTAGGCCTTTCTAGAAGCTCCCACCAGCAGTAGTCTACGCCGTGT TTTGTGAATAAGCAAACACACGTTGGATAAAGTATAGAATTGGCTAAGTT TTTCGAGGTATTCAAACACACTGGATTAAGTGTAGGATCGGCTAAGTTGG GTGGTGGGTTAGGGTCTGCGTGCCCCCTGCTTGGTAAATTTTCGTATTCA ACTTGCTTTCTCCAGTAAGTAGGATGCTGACAGTACCCCGCCAAGCCGAG CTACTATTGTGTAATGTAGGCGGGAGGAACAGCGTTCACGCCCTCGTTGC TTTAGAGTAACAACGCGTGTTGTTCCGACAGTAATCTACCGACCAAACCA GAGCACAGATACAAAAGTGGGATTCTTCATGGCATCTCGGGTTGTTACAA GGGCGACATCGTCTCACGTAGCCCATACGATTCAACAGCAGTAGATGCGG TTTCTGTCGGCTCTGAGGTTCTCGCCGCGGAATGGTGGTTTTCTGCGAAA GCATCGATGGAGAATTCCTGCTGCTGTGTTGCCCGACCAAATCGGTTTGT CAACACGCCAACTTCGCAACCGTCCAAGCGTCAAGAACAAGGCACCTCGC TAGCGAGTATTATGTCCAAGTTTTGTACTGGTCTACGGCAATGTTGGGCT GTCTGGTTGTTGTTGCAATTTTCCCCTTCTCCACTGAACACCTTCCTCTG TACCCTTGCCGTTCCGATCTACCATATCTACCATACATACCCTTCGGCGA CCCCTTGGGAAGAAGAACGTCACAACATCGGCGCCGTTCCGCATGCCACC GTTATCGGAGCCCGTACACCGAGACGGGGCTGGTTCTGACTCCTCCGCTG CGGTAGCTCCCGCCCTCGAGGGCTGGACCAGCGTAGAGGGGGAGTTCATC CTCGCTGACATGACACAAGTGAGTGAGTAACACAAGTGACTAACACAATT GACTAACACGAGTGAGTAACACAAGTGAGTAACACAAGTGACTAACACAA GTGACTAACACAAGTGAGAGGCTGTACACTACACACCGTCCGTATCATTC TATGTACCTTACGTGGTACGAGTTCCGGGCACCAAGAGCGATACCCGCGG TTGCGTAGCGTAAGCACGCGAAAAATCTGAGGCTCCGTCGATTGAGGGAG CCTGTGAAACCGTGGCCACCGTGAACGTTGCTCGCTCAGCGGTACAACCG CGCACATCCTGTGACTGTGACAATGTCGTTGCGTGTCTGAATTTAACTTG GGGGCGGTTTCGCCACATGATGAAGTATTTGAGTTGAACCTCGTGTGGAT GAGGTATTTCTCTGAACGGGTCCCCAACACCATCACTCGCACCATTTTCC ATCATCGTCATCATCAACAACAAGAAAACAACAACAACAGCAAGAAACAA CAACAGCAAGAAACAACAACAACAACAACAACAACAACAACAACAATGTT GCCCCATCCATCTCCACCCTTGGACAGACCTCGCATATCGCGCACGACAT GCCCATGGCTCCCCACTCCCGCCTTGGCGACGGCCTGATGGACCTGTTCT TCATCAAGAAGGGGGCCAGCAGATTCGCCATGATCCAGGTGCGCGTAACA TATGTGGCACCTGTTCATACATCAAGCACAAAAATTAGCTACAGTATCTT CTCTGCCTTGCTTCCTGGGACTCAAGCACTCTTTTCTGCTTAGGCGTCAG GGCTACGAGAAGCTCGACGTGTGCCTTTGGGCCGGTTCGTTCCCAGCGCA CTCGGCGCCGAGGTTTCCATAAACCCGGTACTCGTTAACCTACCTCCATC AGGCGTCTCTGCGGGGACACCGCAACACACCACCACCCCCGCCATCACCA CCGCCACCATTGATTCACCGGTGCCCCTCGCCCCCCCCCCTCTCGCCATC AACATCGCAGATGTTTCTAGCAATGGAAAAAGGTGGGCACATCTCGCCTC GCTTTCCGTGCATCTCGTGGCACCGCGTTCGGGCGTTCCGAATAGAGCCG CTAACGTCAAGCGGGAGGCTCACGGTCGATGGAGAGCTCGTCGACTACGC ACCGTTGCAACAGCACGTATGGCGCAAAGCCGCCAACGTTTTTTGCTCGC CAGATGACGACGCGGAGAAATCACCAGCGTCTTCAGAAACGTAGCCGAGG CCGCCTTTTGGTTTGGGCGAACATCCTGTATTGGGTTGTCGTGATGGTGT CGAAGTGGGCTATGCCGGAGTATACTGCTTCGGTCTAGAAAGTGCGTTGC CCTGAGAAGGCCACACGCTGCAATGCGATTGTCAATACACAGGTAAAATA TTTTTGTGGCTCATTGTGTGGAGTCTCCGGCTGAAGAGCAAACTGCTTTC ATCGCGCGAGCGCTACATACAAGGCATGTAATGATTGTCTTTAACAAGGC AAACAGCGCTGTATTGTAGAGGAATCAAGCACGCCATCAGATGCGTAAGG CTTATATTGCCACGCATACGCACTTGCACATTTGGTGTTGTGCACCGTAC ACACGAGGTGTATTCAAAGGTTTGAGCATTATTGTAGTTGGCCTCTGCAA GTCGCAACACACATATATCGAATTTCGCTGCGTTCTTAATCGCTGTGGGA GCCAAGACCACCGTCCGTACGTTCACTTTATCGCATTTTTCGTCGTTGTT GTCGTAGGCATTGATGTTCGGAGGGTGTGCGTTGGTTAAGGAATGTTGCG GTTAGCGTAGAAAAGGTGTATTGGAGTGTAGGATGTGGCATGGCCGCTCT ACGTGTTTCCTTGTTAGTATGCTGGCGTTGTCTTAATACTGGTGTGGGGG GTAGGGATAATTCCGCAGCTCTCCTTCTCTTGGACTGACTGTGTTGAAAA GAGTTTTCGACCAGGATTCGAAATGGAATCCGCATGTATGATTTTCAGGT CGGGCTAGTGTTGTGGGGTGTTGCAGCTAGCATAGAGAGGGGGTACCGTA GGATGTGGGATGGTACGGTTTCGTAGATTTTCGTGGGAGAGTGGTTGGCA TCCGTGTCTTGTCGCGCGGGGAACAGACCGTACAAATTGTTGGGTGACCC CACGAATAGTAAATGCTGTCAAGAAGGCCAAGCTCTTGTGTTGGGCCATG GGCTGTTGCCGGCGTTTCTTCCGGACGGGCGGGGTAGACGAAAAGGGACG CCCAGAGCAACACAAATAAATACGTCTGAGTATCGACCTCCGGGTTACTG CTGTAGACTTTTGCAGAAAACGGTTATTATCGTGGGTTGGACCGCGCGGG TCGCGCTTCGCGCCAGCTACAGGACGGATGAAAATACGC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig710:15561..23949-

>mRNA_E_fasciculatus_S2_contig710.15277.1 ID=mRNA_E_fasciculatus_S2_contig710.15277.1|Name=mRNA_E_fasciculatus_S2_contig710.15277.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1917bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig710:15561..23949- (Ectocarpus fasciculatus EfasUO2)
ATGAACCCTCTGCCGTGCACTCGGCGCTCGCAAGAGGCTCCGCAAGAGCA
GCATCTCTCCAGCACGACAGGACGCGTGCGCATGCCCGGGAGACTTCGAC
GACTGGTGTGCTGTTTTTCCTTGTGCAACCTTGGTTGGTTGCACCAAGCA
GGGCTTGCTGTACCAGTCGTCATGGCGGAGGAGGAGGATGTCCCCCCGTC
GACGTCTTTGCTGGGCATCAGCAGCAACCAGAACCATCACGGGCAGAGGC
AGCAGCAGTGCAAGCGGTGTATTCTACAAGACAATCGACGCTTCAGGTCG
CTGCGAGACCAGAAGACCAGGCCATTGTGCTTGACCTCAACCTCCCTCGA
GTATGCCGGCAGCGGCAAAGCAGATTCAACGATGCTAGTACTGAACCTTG
CGGACGTTGTCGGAGCCAAGGCGGAACCCGTTCCCGCCTCGGGCGCAGGA
GAACGAGCGGGGGGGGGTATCAACGGGCGTGGGGGCATCGTGCACCAGTT
GCAGGTCTTCGCGTACGTCCCGAGCGGCGAGGGCAAGGAGACGGGGTGCA
CTGCCAGGGGCGGGGTATGTCGAAAAAACAAGCGAAGAGCCGCCCATCAG
ACGTGGCTGGTGTCCGATTCTGACACGGCTCAGCAGTGGGCCACGGAGAT
CAACAACCGTCTCAGGCAGAGCCAAGGGCAGGAGGAAGGCCTGGAGAGAG
GGAAGAGAGGGCCAGGGCGACGACTGCTGGTCTTGGTCAACCCGGTCAGT
GGAACGGGGGAATCGCGGTCTACCTGGGAGAAGACCCTCAGGCCGATGCT
GGACCAAGCCATGACTACCGTCACCGTAGTCTTCTCCACACGACGGGGCG
AGCTAGCGGAGATCATCACGAACGCTGGCGACAACAGCAGCAGCGGCGAT
GCAGCGAGGAGCGCATCAGCCGGGGGGGGGGGTGGCGGCTCGACAGTGGG
AAGCTTGGACGATTTGGACGGCATCGTGGTCGTCGGAGGGGATGGCACCT
TCTTCGAGGTCCTTCAGGGCATGTACGCCCGGCCGGACTGTGCGAGGCAA
CTGTCGAGGCTGTCCCTAGGCATCGTGCCCGCGGGATCAGGAAACGGCTT
AGCCAAGACGGTGAGTGTGGAGTCCGGAGAATGGTTCGGCACGGTTAGCG
CGTCCTTTCTCGCTGCCAAAGGCCAGACGAAAGCGATGGACCTGCTTCCC
ACCGAATCGGGAGACAAGAAATACCTGGCATTCCTCAACGTCGGGTGGGG
CATGATCAGCGATGTCGACATCGAATCGGAGGCTTACCGTTGGATGGGGT
CTCTTCGATTCACCGTCGGGACCATCGTACGCATCGTCAGCCTCAAGCAC
TACAGGGGACGGATAAGCTTTCTCCCCGACCTGGATGCCGCTGCCGCCAC
CACCACTACAACTCCTTCGAACGTCACAACATCGGCGCCGTTCCGCATGC
CACCGTTATCGGAGCCCGTACACCGAGACGGGGCTGGTTCTGACTCCTCC
GCTGCGGTAGCTCCCGCCCTCGAGGGCTGGACCAGCGTAGAGGGGGAGTT
CATCCTCGCTGACATGACACAAACCTCGCATATCGCGCACGACATGCCCA
TGGCTCCCCACTCCCGCCTTGGCGACGGCCTGATGGACCTGTTCTTCATC
AAGAAGGGGGCCAGCAGATTCGCCATGATCCAGATGTTTCTAGCAATGGA
AAAAGGTGGGCACATCTCGCCTCGCTTTCCGTGCATCTCGTGGCACCGCG
TTCGGGCGTTCCGAATAGAGCCGCTAACGTCAAGCGGGAGGCTCACGGTC
GATGGAGAGCTCGTCGACTACGCACCGTTGCAACAGCACGTATGGCGCAA
AGCCGCCAACGTTTTTTGCTCGCCAGATGACGACGCGGAGAAATCACCAG
CGTCTTCAGAAACGTAG
back to top