mRNA_E_fasciculatus_S2_contig7099.15270.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: rRNA (biogenesis protein rrp5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR9_ECTSI) HSP 1 Score: 241 bits (614), Expect = 2.260e-70 Identity = 135/157 (85.99%), Postives = 140/157 (89.17%), Query Frame = 1
Query: 46 PLLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
PL QVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPK+GLE GQPVEAVIQ +AAARTVTLTADPSLV+SAV +GTSFDLRSLKPGMLV+ IVDSVLSNGILVS
Sbjct: 205 PLTHLFREGQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKDGLEPGQPVEAVIQTV-----KAAARTVTLTADPSLVSSAVTQGTSFDLRSLKPGMLVDAIVDSVLSNGILVS 356
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPP1_9PHAE) HSP 1 Score: 235 bits (600), Expect = 1.730e-68 Identity = 130/160 (81.25%), Postives = 138/160 (86.25%), Query Frame = 1
Query: 46 PLLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVSAPF 525
PL QVVRCAIISLAKEAKGRHIELSLRAS++NKGLSLSQLTKG+GVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLE GQPVEA + +AAARTVTLTADPSLV+SAV +GTSFDLRSLKPGMLV+ IVDSVLSNGILV F
Sbjct: 255 PLTHLFREGQVVRCAIISLAKEAKGRHIELSLRASLLNKGLSLSQLTKGNGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEPGQPVEATV--------KAAARTVTLTADPSLVSSAVTQGTSFDLRSLKPGMLVDAIVDSVLSNGILVRVSF 406
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CXE6_9STRA) HSP 1 Score: 101 bits (252), Expect = 9.820e-22 Identity = 63/165 (38.18%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 49 LLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEG------LEAGQPVEAVIQARSQSMREAAARTVTLT----ADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILV 513
L F QVVRCA++ K + + LSL+ S+VN+GL L LT G+ + G+VAS EDHGYV++ G+DG T FL + D K G AGQP+ ++A ++ R A +L D + + AK L++LKPG+LV+ VD + NG++V
Sbjct: 190 LSAFFQEGQVVRCAVLGTVKSGGHKSVTLSLKPSIVNRGLFLEFLTPGTSILGAVASVEDHGYVISFGVDGFTGFLARADCQKPGSKHKKSFRAGQPLSLAVKAVNKEARTVAVTMASLAKKKGVDDRMELPSQAK---LSLKALKPGLLVKARVDRQVDNGLVV 351
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: rRNA (biogenesis protein rrp5 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6N5_9STRA) HSP 1 Score: 101 bits (251), Expect = 1.370e-21 Identity = 65/176 (36.93%), Postives = 95/176 (53.98%), Query Frame = 1
Query: 1 TWTNTNARLNPSTAPPLLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKD-GPKEGLEA---GQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
T T+ L+ A L + Q V C ++ +KE KG+ I LSLRAS++N L + KG+ +Y SVAS EDHG ++ LG+ G T F+PKKD EGL GQ + A ++ T TLT + ++ V +G S+ + +L GML+ +D VLSNG+ V+
Sbjct: 105 TLAETSDELHNKKAADLTTLFYVGQFVPCVVLKCSKEEKGKRIALSLRASLINGNLGGKHVVKGASLYASVASVEDHGLIMNLGVRGYTGFVPKKDIHIPEGLTEPFPGQVFFCAVNAVNEHTH-----TATLTTEKAVTVKTVTRGDSYTMSTLSLGMLLNVRIDDVLSNGLSVN 275
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MGU8_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 4.180e-21 Identity = 62/155 (40.00%), Postives = 92/155 (59.35%), Query Frame = 1
Query: 73 QVVRCAIIS-LAKEAKGRH----IELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGP--KEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
Q VRC ++ ++K+ + I LS+RAS++N+GL++ ++ G +YG VAS EDHGYV++ G++G FLP K P K LE GQP+E V A + A++ TL A P V A+ + + SL PGMLV +VD + NG+LV+
Sbjct: 155 QFVRCYVLDQVSKDESNANSKKIIRLSMRASLINRGLAMKHVSVGFPLYGCVASKEDHGYVISAGINGANFFLPVKALPTTKSDLEIGQPIECVTTAVNDG-----AQSATLRAHPKAVYEALTRSGNLAFTSLIPGMLVNCVVDKKVENGVLVN 304
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Rrna (biogenesis protein rrp5 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCI2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.200e-20 Identity = 57/135 (42.22%), Postives = 86/135 (63.70%), Query Frame = 1
Query: 127 IELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGP-----KEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
+ L+LRAS VN+GL L + G + G+VAS EDHGYVV+ GL+GVTAFL +K ++ L G PVE V+ ++EA+ R +T DP+++ A+ +G++ L LKPGMLV +D++L NG+ ++
Sbjct: 248 VPLTLRASAVNRGLKLEHVLPGGALMGAVASVEDHGYVVSTGLEGVTAFLARKHVKGGAEVEKALVKGSPVEIVV----LDVKEAS-RAITCGFDPAVLPRALTRGSALTLAGLKPGMLVNAAIDAILKNGLALT 377
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: rRNA (biogenesis protein rrp5 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0AB06_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 3.000e-20 Identity = 57/157 (36.31%), Postives = 88/157 (56.05%), Query Frame = 1
Query: 49 LLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKD-GPKEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
L+ H Q V C ++ +KE KG+ IELS+RAS+VN LS + KG+ +Y SV S EDHG ++ +G+ G T F+P KD EGL QP + A + +T+ LT + + V +G + + +L GML+ ++ VL+NG+ V+
Sbjct: 120 LIQLFHVGQFVPCVVLKCSKEEKGKRIELSMRASLVNGNLSAKHIAKGASLYASVVSVEDHGVIMNVGVRGYTGFVPMKDLHLPEGLTECQPGQQFFCAVNTVNEHT--QTLNLTTEKATTVKTVTRGDGYTMSTLSLGMLLNIRIEDVLTNGLSVN 274
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Aste57867_21818 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LII2_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 4.080e-20 Identity = 62/152 (40.79%), Postives = 89/152 (58.55%), Query Frame = 1
Query: 73 QVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDG--PKEGLEA--GQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
Q V C ++ +KE KG+ IELSLRAS+VN ++ + KGS Y SV+S EDHG VV +G+ G T F+P K+ P+ EA GQ + A + S T TLT D ++ A+ +G S+ + SL GML+ V+ VL+NG+ V+
Sbjct: 149 QYVACVVLKASKEDKGKRIELSLRASLVNGHQNIQHIVKGSSFYVSVSSVEDHGVVVNMGIRGFTGFIPTKELHLPEGTTEAHVGQLLFAAV-----SSVNLHTNTATLTTDRAVAVKAITRGDSYTMGSLGLGMLLNVKVEEVLANGLQVN 295
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCA3_PHYRM) HSP 1 Score: 97.1 bits (240), Expect = 4.090e-20 Identity = 59/158 (37.34%), Postives = 90/158 (56.96%), Query Frame = 1
Query: 43 PPLLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
P L H Q V C +++ +K K + I LSLR S+++ LS S L KG+ ++ +VAS EDHG +V +G+ GV AF+P+K+ L + +V+ + + T T+T + S V AV +G SF L+ L PGML+ V+ VL NG+ V+
Sbjct: 139 PQLSQVFHVGQFVPCMVLATSKADKHKQIHLSLRTSLLHAELSPSSLVKGASLHATVASVEDHGAIVNVGIRGVHAFVPRKELATPVLTGQHLLVSVLSMNTHT------NTATVTIERSQVVKAVTRGDSFTLKQLVPGMLLNVRVEDVLENGLSVT 290
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWJ4_GLOUD) HSP 1 Score: 93.6 bits (231), Expect = 6.580e-19 Identity = 55/148 (37.16%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 73 QVVRCAIISLAKEAKGRHIELSLRASVVNKGLSLSQLTKGSGVYGSVASAEDHGYVVTLGLDGVTAFLPKKDGPKEGLEAGQPVEAVIQARSQSMREAAARTVTLTADPSLVASAVAKGTSFDLRSLKPGMLVETIVDSVLSNGILVS 516
Q V C ++S +KE+KG+ I LSLR S+++ L + KG ++G+VAS EDHG ++ LG+ G+ AF+P K+ + + + S + + T T+T D S V AV +G SF ++ L PGML+ V+ VL NG+ V+
Sbjct: 194 QFVPCVVLSASKESKGKQIYLSLRTSLLHAELLPQTVNKGMTLHGTVASVEDHGAIINLGVRGLNAFVPLKELKTSEITPVKGQHMFVNVLSMNSHTS---TATVTPDRSQVVKAVTRGDSFTVKQLVPGMLLNVRVEEVLKNGLSVN 338 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7099.15270.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7099.15270.1 >prot_E_fasciculatus_S2_contig7099.15270.1 ID=prot_E_fasciculatus_S2_contig7099.15270.1|Name=mRNA_E_fasciculatus_S2_contig7099.15270.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=178bp TWTNTNARLNPSTAPPLLLFGHTTQVVRCAIISLAKEAKGRHIELSLRASback to top mRNA from alignment at E_fasciculatus_S2_contig7099:6663..7705+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7099.15270.1 ID=mRNA_E_fasciculatus_S2_contig7099.15270.1|Name=mRNA_E_fasciculatus_S2_contig7099.15270.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1043bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7099:6663..7705+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7099:6663..7705+ >mRNA_E_fasciculatus_S2_contig7099.15270.1 ID=mRNA_E_fasciculatus_S2_contig7099.15270.1|Name=mRNA_E_fasciculatus_S2_contig7099.15270.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=534bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7099:6663..7705+ (Ectocarpus fasciculatus EfasUO2)back to top |