mRNA_E_fasciculatus_S2_contig7097.15268.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7097.15268.1
Unique NamemRNA_E_fasciculatus_S2_contig7097.15268.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9U1_9PHAE)

HSP 1 Score: 473 bits (1216), Expect = 9.260e-163
Identity = 247/260 (95.00%), Postives = 255/260 (98.08%), Query Frame = 1
Query:    1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
            +SEMVALYKVDSAYGEVMGSADMQLKSWRQ+VGAGRVV DFGERSTKLYRSSVKAFDTKTVRFSTSATR TKRAALLSTMETGIKELYARQLSMLCAR LKSYKAAL+KLL+DDVLNEESEANVLRQTLFSFEADATSLVPD+FSLGFEDEYEELEADLQEFSEKFADSPAAQAK +QKVD KVQKPKGERSVGFGLGLVGMVRQ+GYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDI+L
Sbjct:  333 KSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALLKLLQDDVLNEESEANVLRQTLFSFEADATSLVPDMFSLGFEDEYEELEADLQEFSEKFADSPAAQAKEVQKVDAKVQKPKGERSVGFGLGLVGMVRQEGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIDL 592          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: RHD3a, (RHD3/Sey1 family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA4_9STRA)

HSP 1 Score: 215 bits (548), Expect = 5.370e-63
Identity = 124/273 (45.42%), Postives = 173/273 (63.37%), Query Frame = 1
Query:    1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANVLRQTLFSFEADATSLVPDVF-SLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKP------------KGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
            +SE+ A Y  +SA  E    A+  L +WR +V  GRVV  FG R+  L    ++ +D  T+    +  R  +RA L++ ++ G++ L+ +Q+++L A  L+++K  +V LL  D L EESEA +LR TLF FE+ A+ L+ D    L FE EYEELEADL ++ E+F DSPAAQ +A+ K++ +V K             +G+RS+  GLGLVGMVR  G GNLQ F+GYR GPHT+T+GYANDA  P+A        PLLRLQPKLN+DI+L
Sbjct:  272 RSELAAAYAAESAGAEAAADAEGALSAWRAAVARGRVVGGFGARARALRARVLEGYDRATLSHGGTPLRAQRRAELVALVDGGVERLFRQQVALLSADALRAFKREMVALLNKDKLTEESEAGLLRSTLFDFESRASELLSDDLPDLTFEAEYEELEADLCDYGERFGDSPAAQTRALAKMEKQVSKAARDGDKPGKKGKEGKRSIVAGLGLVGMVRTGGLGNLQAFSGYRLGPHTVTLGYANDADTPEAMQDGEAP-PLLRLQPKLNLDIDL 543          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV22_9STRA)

HSP 1 Score: 142 bits (359), Expect = 8.840e-38
Identity = 89/266 (33.46%), Postives = 143/266 (53.76%), Query Frame = 1
Query:    4 SEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDV----LNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQK----PKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIE 777
            +++ A Y VD+ Y ++  +A   + SWR++V  G  V  FG  ++KL    + AF+  T      + R  +R  L+  +++ + EL+A Q++ L A T  ++ A L++LL+       + +E     +++  F++ A    L      L    + +++   L + + KF +SP A+   + K+  K QK    PK  RS   G  L GMVRQ G GNLQGF+ Y AGPH++TMGY ND   P++   A G  P LRLQPK++ DI+
Sbjct:    3 ADLEAAYSVDTTYTKLRSTAAGAIGSWRRTVDRGARVGGFGNSASKLRGKIINAFNAATQGCGEGSRREARREELMVYLDSAVTELHAAQIAALSAETEAAFSAKLLRLLDGTKDAAPIEDEKVKTAMQKAEFAYAAAVAQLAVPAIGLDGAADVDDMSVTLGDLASKFDESPPAKVLRLNKLTLKAQKNRKSPKNPRSFTPGFHLSGMVRQIGSGNLQGFSSYSAGPHSVTMGYQNDRGTPESM--AEGDEPFLRLQPKVHFDID 266          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S911_9STRA)

HSP 1 Score: 135 bits (341), Expect = 5.130e-33
Identity = 97/271 (35.79%), Postives = 147/271 (54.24%), Query Frame = 1
Query:    1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLED-----DVLNEESEANVLRQTLFSFEADATSLV-PDVF-SLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKP----KGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
            + E++  Y +D AY +    A   L  WR+SV  G  + DFG+ ++ L  S++  FD+ T   S  + R  +R  L +T+   +  ++  Q+  L  +TL+ ++  L+ LL        V +E  EA V R+  F F   A  LV P V  S G + E ++    L  F + F +SP A+   + +++ KVQ+     K  RS+  GL L GM+RQ G GNLQGF GY  GPH++TMGY ND    + SG  +   PLLRLQPK+++D++L
Sbjct:  290 RDELMGWYAIDRAYADAHAQAQGTLNGWRRSVEKGNRIGDFGDAASTLLESTLARFDSATEACSIGSRRKERRQELETTIGKDLDRMFQLQIGDLEKQTLRKFEGRLLSLLNGVKDAAAVPDEAGEAEV-RKFAFDFGRHAARLVVPGVTGSEGAKSETDKFSETLTTFLQDFDESPPAKVLRLNRLERKVQRSRKAEKNPRSIVPGLHLSGMMRQIGVGNLQGFAGYTMGPHSVTMGYQNDRGSLE-SGDTS---PLLRLQPKIHLDVDL 555          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Protein (SEY1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZC2_PORPP)

HSP 1 Score: 130 bits (326), Expect = 6.120e-31
Identity = 81/263 (30.80%), Postives = 132/263 (50.19%), Query Frame = 1
Query:    1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDD-VLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQK--PKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
            Q E++A +  + AY + M     Q+  W   V  G  +A+FG  ++ L  SS++AFD +T+ ++ SA R  K A +   M+  I+ L+ +Q+++L +  +  +K  L+    D   +    E   L Q    F   A  L+     L F     EL   + +++ ++A+SP  Q  A+++++       P  +R  G+GL L G +R  GYGN Q   G   GPH +     NDA   +  G   GKVPL R+QP LN+D++L
Sbjct:  291 QGELLASFYCNQAYSKHMKRVSKQIMQWITQVDRGMTIANFGAAASSLMSSSLEAFDAETIAYAESACRAQKHAEMSQFMQQNIRSLFNKQIALLQSAAMNDFKKRLIDSTSDSGEVPATDEQQALNQADAYFTKRAQELMVSAMRLNFNAARLELGNAMNDYATRYAESPGVQLLAMERMEQAQAGALPPKQRGWGWGLSLTGAMRPRGYGNFQLLCGASKGPHVVNFSLCNDADAAEQEG--QGKVPLFRMQPTLNIDVDL 551          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KED8_9STRA)

HSP 1 Score: 125 bits (314), Expect = 7.800e-30
Identity = 86/265 (32.45%), Postives = 140/265 (52.83%), Query Frame = 1
Query:    4 SEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSAT---RTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLED-DVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK-GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
            S   A+   D +Y  +  SA  +L  W+  V  G +V  FG  ++ L   ++ ++D  T+  + +     R   RA L + +E  I+ L+  Q+  L   TLK + A+L+K   + + ++ +  A   R   F+F+  A  L     SL      + + + L +    F++S +A+ K + ++    +K K  +RS+ + LGLV M+R DG+GNLQGF GY  GPH + +G+ NDA  P+      G + PLLR+QPKLN+DIEL
Sbjct:  162 SVTTAMLLCDDSYASIYRSARAKLMPWKGRVERGLLVDKFGTLASSLLEKTMSSYDVDTISAAGTPAAEYRLNVRAKLEARVEDAIRTLFESQIINLEKSTLKKFNASLLKQKNNKNEIDFDDNAAAKRSAAFAFDTAAQDLEVPSLSLRRAQFSQIIASKLDDALTNFSESNSAKMKDMMQIQKNSKKSKPSQRSLDYSLGLVAMIRPDGFGNLQGFAGYDIGPHKMIVGFHNDADAPETINQFGGIRPPLLRVQPKLNLDIEL 426          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0C9_PHATR)

HSP 1 Score: 123 bits (308), Expect = 8.020e-30
Identity = 89/263 (33.84%), Postives = 137/263 (52.09%), Query Frame = 1
Query:   16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNE-ESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
            A   V  +YG+   +A  ++ SW+     G +V  FG  +  L    +  F+ +T+  +     +  R  +R  L + ++T ++E++  Q+  L   TLK + A L++ + D V +  +S A  LR+  F+FE     L      L       EL A L +    F DSPAA+ K   +V+  V K K  G+R V FG+ LV ++R DG+G+LQGF GY+ G +++T G  NDA  P       G + PLLR+QPKL VD+EL
Sbjct:   49 AFVAVGQSYGKQARAARAKIVSWKARTARGLLVDAFGREAALLRNRVLGTFEKETLSAAGLPLVANYRLEQRTRLKALLDTAVEEVFVAQVHNLEQSTLKRFNAGLLRTMNDPVESVMDSNAAALRKETFTFETLMDDLEVPGLGLTKVKAARELTAKLNDALVAFPDSPAAKIKRTGRVNKVVNKEKKPGQRGVDFGVDLVAVLRPDGFGSLQGFAGYQMGGNSLTFGVHNDADDPQTIAQFGGVRPPLLRVQPKLRVDVEL 311          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZ76_PHATC)

HSP 1 Score: 124 bits (312), Expect = 4.860e-29
Identity = 90/263 (34.22%), Postives = 138/263 (52.47%), Query Frame = 1
Query:   16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNE-ESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
            A   V  +YG+   +A  ++ SW+     G +V  FG  +  L    +  F+ +T+  +     +  R  +R  L + ++T ++E++A Q+  L   TLK + A L++ + D V +  +S A  LR+  F+FE     L      L       EL A L +    F DSPAA+ K   +V+  V K K  G+R V FG+ LV ++R DG+G+LQGF GY+ G +++T G  NDA  P       G + PLLR+QPKL VD+EL
Sbjct:  276 AFVAVGQSYGKQARAARAKIVSWKARTARGLLVDAFGREAALLRNRVLGTFEKETLSAAGLPLVANYRLEQRTRLKALLDTAVEEVFAAQVHNLEQSTLKRFNAGLLRTMNDPVESVMDSNAAALRKETFTFETLMDDLEVPGLGLTKVKAARELTAKLNDALVAFPDSPAAKIKRTGRVNKVVNKEKKPGQRGVDFGVDLVAVLRPDGFGSLQGFAGYQMGGNSLTFGVHNDADDPQTIAQFGGVRPPLLRVQPKLRVDVEL 538          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ39_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.170e-27
Identity = 92/264 (34.85%), Postives = 135/264 (51.14%), Query Frame = 1
Query:   16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANV--LRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
            A   V +A+     SA  ++ SW+     G     FG  +  + R  +  FD +T+  +     +  R   R  L S +++ I EL+  Q++ L  RT K   + L+K L+     E +  N   +R  + SFEA    L     SL       ++E+ L + +  F DSPAAQ K  +KV   V K K  G+RSV  GL LV ++R DG+G+LQGF GY+ G ++IT+G  NDA  P       G + PLLR+QPKL VD+E+
Sbjct:  275 AFVAVSNAHAXQSRSARAKIASWKSRASRGLWAESFGFEAEAMRRRVLSGFDAETLLAAGLPLVAPYRLEMRNQLASLVDSSIVELFGAQVANLEKRTSKRLGSQLLKKLDSTPPEEVASENAAAIRAAMVSFEATMGDLEVPSLSLTKAKPCFDMESKLTDEAINFYDSPAAQIKRTKKVAEVVSKEKKPGQRSVDLGLDLVAVLRPDGFGSLQGFAGYQLGGNSITLGIHNDADDPATISQFGGVRPPLLRIQPKLRVDVEM 538          
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein (Fragment) n=4 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULW3_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.260e-21
Identity = 85/261 (32.57%), Postives = 129/261 (49.43%), Query Frame = 1
Query:   16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRF-----STSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKL------LEDDVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAK---AIQKVDTKVQKPKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQ 753
            A+   + A+     +A  +L +W+     G  V  FG  +  L + ++  +D  T+       S +  R  KR+ L+  +ET I++L+A Q+S L   TL+ + A L++          D   E + A  +R   F+F+   T L     SL      +EL   L      FADSPAA+ K   AI+K   K +KP  ERS+  GL +V M+R DG+G  QGFTGY+ G ++IT+G  NDA  P       G + P +R+Q
Sbjct:  307 AMLACEDAFARHARTARAKLYAWKSRTSRGLRVEKFGALAEALLKRTMALYDNDTMAAAGYGSSVAPYRLEKRSKLVKKIETPIRQLFALQVSNLEKTTLQKFNAMLLRKHGKTSPATSDFYTENAAA--MRSAAFAFDTAMTDLEIPSLSLTKAKPSQELNGKLNSLLTGFADSPAAKLKLMKAIKKGANKQKKPT-ERSIDAGLDIVAMIRPDGFGTFQGFTGYQLGGNSITVGVHNDADDPGVISQFGGVRPPFIRVQ 564          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
Uncharacterized9.260e-16395.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
RHD3a,5.370e-6345.42RHD3/Sey1 family GTPase n=1 Tax=Tribonema minus Ta... [more]
Hypothetical8.840e-3833.46protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical5.130e-3335.79protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Protein6.120e-3130.80SEY1-like n=1 Tax=Porphyridium purpureum TaxID=356... [more]
Hypothetical7.800e-3032.45protein (Fragment) n=1 Tax=Leptocylindrus danicus ... [more]
Hypothetical8.020e-3033.84protein n=1 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Predicted4.860e-2934.22protein n=1 Tax=Phaeodactylum tricornutum (strain ... [more]
Uncharacterized1.170e-2734.85protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Hypothetical1.260e-2132.57protein (Fragment) n=4 Tax=Attheya septentrionalis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7097contigE_fasciculatus_S2_contig7097:2778..7527 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score473.0
Seed ortholog evalue8.8e-131
Seed eggNOG ortholog2880.D8LTX2
Model size783
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.GTP binding
EggNOG OGsKOG2203@1,KOG2203@2759
Ec32 ortholog descriptionRHD3a, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic
Ec32 orthologEc-12_004000.2
Cds size774
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7097.15268.1prot_E_fasciculatus_S2_contig7097.15268.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7097 2778..7518 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842370.7626085-CDS-E_fasciculatus_S2_contig7097:2777..28401696842370.7626085-CDS-E_fasciculatus_S2_contig7097:2777..2840Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 2778..2840 -
1696842370.7839491-CDS-E_fasciculatus_S2_contig7097:3628..37511696842370.7839491-CDS-E_fasciculatus_S2_contig7097:3628..3751Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 3629..3751 -
1696842370.7944727-CDS-E_fasciculatus_S2_contig7097:4297..43751696842370.7944727-CDS-E_fasciculatus_S2_contig7097:4297..4375Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 4298..4375 -
1696842370.8034406-CDS-E_fasciculatus_S2_contig7097:5096..52341696842370.8034406-CDS-E_fasciculatus_S2_contig7097:5096..5234Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 5097..5234 -
1696842370.8129349-CDS-E_fasciculatus_S2_contig7097:5599..57951696842370.8129349-CDS-E_fasciculatus_S2_contig7097:5599..5795Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 5600..5795 -
1696842370.8317645-CDS-E_fasciculatus_S2_contig7097:6530..65831696842370.8317645-CDS-E_fasciculatus_S2_contig7097:6530..6583Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 6531..6583 -
1696842370.8436852-CDS-E_fasciculatus_S2_contig7097:7395..75181696842370.8436852-CDS-E_fasciculatus_S2_contig7097:7395..7518Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7097 7396..7518 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842370.8540792-UTR-E_fasciculatus_S2_contig7097:7518..75271696842370.8540792-UTR-E_fasciculatus_S2_contig7097:7518..7527Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7097 7519..7527 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7097.15268.1

>prot_E_fasciculatus_S2_contig7097.15268.1 ID=prot_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=258bp
MVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSV
KAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSY
KAALVKLLEDDVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYE
ELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPKGERSVGFGLGLVGMV
RQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPK
LNVDIEL*
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mRNA from alignment at E_fasciculatus_S2_contig7097:2778..7527-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7097.15268.1 ID=mRNA_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7097:2778..7527- (Ectocarpus fasciculatus EfasUO2)
CAGTCTGAGATGGTTGCCCTCTACAAGGTGGACTCGGCGTACGGAGAGGT GATGGGCAGTGCTGACATGCAGCTCAAGTCCTGGAGACAGAGCGTCGGGG CGGGCAGGGTCGTTGCCGACTTCGGCGAGAGGGTGAGAAAGGGCCACAGC TTAACTGCGGTGTGCCCCGTCTTTGTTTGTCCTGTTCTTTTTTTTTTTCG ATTGCTTTTCACCGTGTTTTGTCTCTCGCGTTTTCTCTTCTGTAGCATAC ATACGCTTGCTGACTATTGGTGGAGTGTTGTCTATAGTATCATAGGTGTT TTTGTGTGTTTTTCGTGTATTGTCCAATGTGTAACCCCAGCGTGCTTGAC CCCAGCGTGCTTGTAACTAGTATGTGCTGTATCTTTGGGGCTTACCACAT GGAATAGTTTCGTGTATTGTGTTGTGTTGTAGTGTAGTCACTGTGCCTAC CGCGGTTGTCCTTGTGATGCGCGTGATGTCGGAGGGAGAGCAGCGGACTG TTCGGGTATGGATTGTTGTTGTTTGCGTGCACGCCAGTATTGCTACTGCT GCTCTGCCGGCGTTAGCGCCAATGTATGAATTCAGCATATGTATGTACCT TGGTCAATCACCAAACACCCACGAGAAGGGCGACGTACTTCTGTTACACG GAGAGCGTGGCTATGCACGCCCGTCAGGTTTACTGGCTCCTTGTTCCTGT ACCTTATTTGCGACCGCCTGTCATCCTGATGAAAATTACTTTTTGTTCGT TGATGTTTTGTGTTTTTTTTTCTCTACCGGTGTCTGCTGTTGCTGGCGTG GTCTCCACTAACCGGCGTCCAAACCATGTATCGTGGTCATCCTTCATGGC CGACTAACACTATCCACGAACCGTCGTCACCGTCACCGTCACTCGTATTC GATTAATCGATTTATGGATCGAACGATCGATCGATCACCTGCAGTCGACG AAGTTGTACCGGTCGTCCGTCAAGGCTTTCGACACCAAGACGGTCAGGTG ATCCACAAGGGGTTAGGCAAAGGGAGATTGGGGGGGGGGGGCGTGCTCGA CTGCCGTACCAGATCCCTCGTTGGCTAAGTTTCAAAGCCCGATTTGTTCC ACGGAAGGAAAGGTGCACGTGCCGAAGACGGCGGCGTTGGGAAGATGTCA CGGACAGGCTTTCCGAAGCCCTACAAGTATCGTTCGGCATCTTGACACCA CCCTCTCTTTAGCATTATAGCGGAGCGATCGAGCTTTGAAATTCTGCCAA TAAATGGGGTCAGTTCCTTTGTCCGGTTCTCACCATCCAATAAGGTAGTC TAGAAATTTGCGCGCCACCAGATTTTGTTTTGGGACTAGCGGGCAGTAGG CCCAACTAGTGTCACAAGCCGAGAGGTGTCTCTTGGGGGCAAGTGATTTT GAGTCGGTGCTTGTTTGGTTTCGTCGCCTCCAAGGTTCGAATTGGTTTGA TGTATTTCCTTTGTTTCCTGTTCTTTCCGAGGGACGCAGTTGCTTGAGTC GGGTCGGCCGCGCGGTCCAATGGCCAAGGCACGAAGGCGGAGCATCGAAC GCGTAGGGCCTCCGTCCGGGTGTTGGGGCGTTGTGCCGTGTACACCACCC AAGCTACAATAGTGCCGGCGCTCTAGCGTAGCGTATGTGTAATTGTCTAC GTGCGAGCGCGCCTGAAAGGCAACAGTCTCGCTCGGTCTGGACCCCGCCC TTACTGTTCGCTCACCGCCTGCAACGTTGCAGGTTCAGCACTAGCGCGAC CAGAACGACGAAGAGGGCGGCTCTGCTCTCCACCATGGAGACGGGCATCA AGGAGCTGTACGCCCGGCAGCTGTCGATGCTGTGCGCGAGGACCCTGAAG AGCTACAAGGCGGCTTTGGTGAAGCTCCTTGAGGACGACGTGCTCAACGA GGAGTCGGAGGCGAACGTGTTGCGTCAGGTTGGTGTCGTAGTGTTGTTGT TGTTTTTGTTGTTGGTAGCGAGGTGGTGTGGCTGTGGCCATTGTTGTGGT GGTGGTGGTGGCTGTGGCCATTGTTGTGGTGGTGGTGGTGGTGGCGGTGG TGGTGGTGGTCGTTGTTGTTGGTAGAGGTGGTGTGGCTGTGGCCGTTGAG GCTGTTGTTGTGGTGGTGGTGTTTGTGTGGCCCTATTTACCTTTGGTACT GTATGTGGTGCTCGACGAGCTCGTTGAAACCCTCCGTTTCCCTTTCCCTC CCGTCGCCTTCTCCCTCGCCCCAACTCCCTCACCCTCGCGTCCTCCTCTG CCCGTCTCTCATCCTCTCCCCTCGCACGCATGCTTCCTTTCAGACTCTCT TTTCTTTCGAGGCAGATGCTACCTCTCTTGTGCCGGACGTGTTCTCCCTG GGCTTCGAGGACGAGTACGAGGAGCTCGAGGCAGACCTGCAGGAATTTTC GGAGAAGTTTGCCGACTCTCCGGCCGCCCAGGTCAGCTAGCTGGCTGTAG GTGGTCGGTCCCCTTCTTCCTTCCCACAAGTCTCGGCTGGAGTGTCGCGA TTAGTTGCATCATTTACCTTATGACCAGAGGCAAAACATTTTTTTTTTTT GTAATCGTTGCGCCGCAGTAGCCCTTGGCGGACGATCGGTAGGCGCTTGG GGAGTCTGAAGTCTGTTGTGTCCGTCGTTCTGTCTGGCCTATGTCTGGTT TATCTGACCCCGCCTCTGTTGTTTCTCCGTCCCTTTCTCTCCATCTTTGG GTTTGCCGTGTTTAGTGCTTCTCTGTCATGCCGATACATCAAACGTGCGG GCGTGTACTTCTTCTGTACTGCCAGGACCACTTCACTTCCTATATGATCG TCTTAGTCTGTCCCCTATATGATCGTCTTAGTCTGTCCCCTATATGATCG TCTTAGTCTGTCCCCACCCTCCTTCCTCCGTCTCTAACGCTCTCATCCAA GGTCGGCAAACAGTAGTCATTCCGCTCCGCGTCCCAAAGTCGTGTTTTGG TGGGATGACTGGTCGGTCTAGGGAGCGCTGCCACCGGTACATACGTTTAA GGGGAGTGGCTGGCTATGCTCATGGTCTCCTTGTTTCGCCCGCCCTTCGC TGTCCTATACACGTCCTCTTGTCTCTCGACGGACGCACGCACATACATAC CTCCTCGATGCATCCTCACCGTGCCCCCTTTGTCCTCACTCAACAAAATC AGGCGAAGGCGATCCAGAAGGTAGATACCAAGGTGCAGAAGCCGAAGGGG GAGCGCAGCGTGGGCTTCGGCTTGGGACTGGTGAGACCTTATCTACCGTA GTATAGCACCCCCCCTCCCTCCTTCCCTACCTCACTCTCTTGACTCGAGC CAATAGCGAAGAAGTGCTGTGCAGGAGTATAGCAGCCCAATGTGCTCGTG TCGATACTTGAAGCAGAGCCGCAGGCCATCGACCCTACTGTTGTGTGGGT AGCGACGCATGCCGTTTGGAATGTAGGTAGACAGAGTGTGGTTGAAGACC TCACGACACTCGCACACGGGTCTACTTGGCAACACACAGCACAAGAGAAG ATCGTTCATCACGGTTGACGCATTTCGTCTACGTGTGTTCGTGTGAGTCT GTCTGCGTGTGCTTTAGTTAGCGCCGACAATGAAAATACGTCAGTGTCAG CAGGTACAAGTTGTGTGCTAGTTGTTATGCTCCTCTGGCAGAGTTGGTAT ATAGGTGGAGGCAGGGAATCCCGGCATGAGAGGCATTTTTTTTTTCCCTC TTCCGTGGTTTCGATTTTTTCGTCATGTGTCCTTGTTCCGAGCCCCGACT TTTTATTTTTTATTTTTTCGCGACAGGTGGGGATGGTACGACAAGACGGC TACGGAAACCTGCAGGGATTCACCGGCTACAGAGCGGGCCCTCACACCAT TACCATGGGATACGCCAACGACGCTTCGTTGCCGGATGCTAGCGGAGGGG TAAGAGGCGAAGACGAAAGAGGGACCATTTTCGGTTGTCTTTGCAATGTT TTTCGTTGTTGTGTTTTTCGCATCGGTGTTTCGTGTTGGCGTGGCGTCGT CCCGGTGAATGTCGCTGGGTGGGCGAGCGGTAACAAGCAAGCAGTGAGCC TTGCCGGTGATGTTGTGGTGGCGTTGGTGTCTGTGCTGGTGGTTGCAACG CTCACGGTAGGCGGTTTTGATTGTCTCAGCCAACCGTCGTGTTGTCTTTG GTTGTGGAGGTTTCATTGTTTCATTGGTGTCGTATCTGACATCGTTATCG TTGCCATCTGCCGTTGATGTCAAGCTGCCGTGCATGTGTGTCGTACGCAA AGGCTTCGTTCTTCCCACCCACTCCCCGACTACTGTTTTAAGTTCCGCGC TGGTGCCTCCTAATAAACATATCGGCGGACATATCTACGTTTTAACCCCG GACGCTAACCGGCATCCAACGTATGACGTGGTCAAGGTGGCAGCGAAGAC GCGTGCCTTGCATGCATGCCTACCACGACATCGCACGTCAAATCGCTTCG CCTAAGGCGGAATAGCTGGGTTGCTCTGTGCTACGTGATTTCGTGCTTCG AAAGCTTTTTATTTCGGGCGTACTTCCATACTTCGCTCAGCCCCCGCACA CGGTTGTTGGTTGTTGGCTGGTTGCTTTCGTTTTTTCCTTGCTTCGCTGG TCCTCTCTCTTACTCCCTCTCGCTGTGTGGCTCTCTCTCTGTGTGTCCGT GCACTCTCTGCTGCTCCTCCTCCGAAAAAAAAAACAGGCCGCCGGGAAAG TTCCACTACTTCGCCTCCAACCGAAGCTCAACGTGGACATCGAGCTCTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7097:2778..7527-

>mRNA_E_fasciculatus_S2_contig7097.15268.1 ID=mRNA_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=774bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7097:2778..7527- (Ectocarpus fasciculatus EfasUO2)
ATGGTTGCCCTCTACAAGGTGGACTCGGCGTACGGAGAGGTGATGGGCAG
TGCTGACATGCAGCTCAAGTCCTGGAGACAGAGCGTCGGGGCGGGCAGGG
TCGTTGCCGACTTCGGCGAGAGGTCGACGAAGTTGTACCGGTCGTCCGTC
AAGGCTTTCGACACCAAGACGGTCAGGTTCAGCACTAGCGCGACCAGAAC
GACGAAGAGGGCGGCTCTGCTCTCCACCATGGAGACGGGCATCAAGGAGC
TGTACGCCCGGCAGCTGTCGATGCTGTGCGCGAGGACCCTGAAGAGCTAC
AAGGCGGCTTTGGTGAAGCTCCTTGAGGACGACGTGCTCAACGAGGAGTC
GGAGGCGAACGTGTTGCGTCAGACTCTCTTTTCTTTCGAGGCAGATGCTA
CCTCTCTTGTGCCGGACGTGTTCTCCCTGGGCTTCGAGGACGAGTACGAG
GAGCTCGAGGCAGACCTGCAGGAATTTTCGGAGAAGTTTGCCGACTCTCC
GGCCGCCCAGGCGAAGGCGATCCAGAAGGTAGATACCAAGGTGCAGAAGC
CGAAGGGGGAGCGCAGCGTGGGCTTCGGCTTGGGACTGGTGGGGATGGTA
CGACAAGACGGCTACGGAAACCTGCAGGGATTCACCGGCTACAGAGCGGG
CCCTCACACCATTACCATGGGATACGCCAACGACGCTTCGTTGCCGGATG
CTAGCGGAGGGGCCGCCGGGAAAGTTCCACTACTTCGCCTCCAACCGAAG
CTCAACGTGGACATCGAGCTCTGA
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