mRNA_E_fasciculatus_S2_contig7097.15268.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9U1_9PHAE) HSP 1 Score: 473 bits (1216), Expect = 9.260e-163 Identity = 247/260 (95.00%), Postives = 255/260 (98.08%), Query Frame = 1
Query: 1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
+SEMVALYKVDSAYGEVMGSADMQLKSWRQ+VGAGRVV DFGERSTKLYRSSVKAFDTKTVRFSTSATR TKRAALLSTMETGIKELYARQLSMLCAR LKSYKAAL+KLL+DDVLNEESEANVLRQTLFSFEADATSLVPD+FSLGFEDEYEELEADLQEFSEKFADSPAAQAK +QKVD KVQKPKGERSVGFGLGLVGMVRQ+GYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDI+L
Sbjct: 333 KSEMVALYKVDSAYGEVMGSADMQLKSWRQTVGAGRVVGDFGERSTKLYRSSVKAFDTKTVRFSTSATRATKRAALLSTMETGIKELYARQLSMLCARALKSYKAALLKLLQDDVLNEESEANVLRQTLFSFEADATSLVPDMFSLGFEDEYEELEADLQEFSEKFADSPAAQAKEVQKVDAKVQKPKGERSVGFGLGLVGMVRQEGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIDL 592
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: RHD3a, (RHD3/Sey1 family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBA4_9STRA) HSP 1 Score: 215 bits (548), Expect = 5.370e-63 Identity = 124/273 (45.42%), Postives = 173/273 (63.37%), Query Frame = 1
Query: 1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANVLRQTLFSFEADATSLVPDVF-SLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKP------------KGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
+SE+ A Y +SA E A+ L +WR +V GRVV FG R+ L ++ +D T+ + R +RA L++ ++ G++ L+ +Q+++L A L+++K +V LL D L EESEA +LR TLF FE+ A+ L+ D L FE EYEELEADL ++ E+F DSPAAQ +A+ K++ +V K +G+RS+ GLGLVGMVR G GNLQ F+GYR GPHT+T+GYANDA P+A PLLRLQPKLN+DI+L
Sbjct: 272 RSELAAAYAAESAGAEAAADAEGALSAWRAAVARGRVVGGFGARARALRARVLEGYDRATLSHGGTPLRAQRRAELVALVDGGVERLFRQQVALLSADALRAFKREMVALLNKDKLTEESEAGLLRSTLFDFESRASELLSDDLPDLTFEAEYEELEADLCDYGERFGDSPAAQTRALAKMEKQVSKAARDGDKPGKKGKEGKRSIVAGLGLVGMVRTGGLGNLQAFSGYRLGPHTVTLGYANDADTPEAMQDGEAP-PLLRLQPKLNLDIDL 543
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FV22_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.840e-38 Identity = 89/266 (33.46%), Postives = 143/266 (53.76%), Query Frame = 1
Query: 4 SEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDV----LNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQK----PKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIE 777
+++ A Y VD+ Y ++ +A + SWR++V G V FG ++KL + AF+ T + R +R L+ +++ + EL+A Q++ L A T ++ A L++LL+ + +E +++ F++ A L L + +++ L + + KF +SP A+ + K+ K QK PK RS G L GMVRQ G GNLQGF+ Y AGPH++TMGY ND P++ A G P LRLQPK++ DI+
Sbjct: 3 ADLEAAYSVDTTYTKLRSTAAGAIGSWRRTVDRGARVGGFGNSASKLRGKIINAFNAATQGCGEGSRREARREELMVYLDSAVTELHAAQIAALSAETEAAFSAKLLRLLDGTKDAAPIEDEKVKTAMQKAEFAYAAAVAQLAVPAIGLDGAADVDDMSVTLGDLASKFDESPPAKVLRLNKLTLKAQKNRKSPKNPRSFTPGFHLSGMVRQIGSGNLQGFSSYSAGPHSVTMGYQNDRGTPESM--AEGDEPFLRLQPKVHFDID 266
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S911_9STRA) HSP 1 Score: 135 bits (341), Expect = 5.130e-33 Identity = 97/271 (35.79%), Postives = 147/271 (54.24%), Query Frame = 1
Query: 1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLED-----DVLNEESEANVLRQTLFSFEADATSLV-PDVF-SLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKP----KGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
+ E++ Y +D AY + A L WR+SV G + DFG+ ++ L S++ FD+ T S + R +R L +T+ + ++ Q+ L +TL+ ++ L+ LL V +E EA V R+ F F A LV P V S G + E ++ L F + F +SP A+ + +++ KVQ+ K RS+ GL L GM+RQ G GNLQGF GY GPH++TMGY ND + SG + PLLRLQPK+++D++L
Sbjct: 290 RDELMGWYAIDRAYADAHAQAQGTLNGWRRSVEKGNRIGDFGDAASTLLESTLARFDSATEACSIGSRRKERRQELETTIGKDLDRMFQLQIGDLEKQTLRKFEGRLLSLLNGVKDAAAVPDEAGEAEV-RKFAFDFGRHAARLVVPGVTGSEGAKSETDKFSETLTTFLQDFDESPPAKVLRLNRLERKVQRSRKAEKNPRSIVPGLHLSGMMRQIGVGNLQGFAGYTMGPHSVTMGYQNDRGSLE-SGDTS---PLLRLQPKIHLDVDL 555
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Protein (SEY1-like n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YZC2_PORPP) HSP 1 Score: 130 bits (326), Expect = 6.120e-31 Identity = 81/263 (30.80%), Postives = 132/263 (50.19%), Query Frame = 1
Query: 1 QSEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDD-VLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQK--PKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAGKVPLLRLQPKLNVDIEL 780
Q E++A + + AY + M Q+ W V G +A+FG ++ L SS++AFD +T+ ++ SA R K A + M+ I+ L+ +Q+++L + + +K L+ D + E L Q F A L+ L F EL + +++ ++A+SP Q A+++++ P +R G+GL L G +R GYGN Q G GPH + NDA + G GKVPL R+QP LN+D++L
Sbjct: 291 QGELLASFYCNQAYSKHMKRVSKQIMQWITQVDRGMTIANFGAAASSLMSSSLEAFDAETIAYAESACRAQKHAEMSQFMQQNIRSLFNKQIALLQSAAMNDFKKRLIDSTSDSGEVPATDEQQALNQADAYFTKRAQELMVSAMRLNFNAARLELGNAMNDYATRYAESPGVQLLAMERMEQAQAGALPPKQRGWGWGLSLTGAMRPRGYGNFQLLCGASKGPHVVNFSLCNDADAAEQEG--QGKVPLFRMQPTLNIDVDL 551
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KED8_9STRA) HSP 1 Score: 125 bits (314), Expect = 7.800e-30 Identity = 86/265 (32.45%), Postives = 140/265 (52.83%), Query Frame = 1
Query: 4 SEMVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFSTSAT---RTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLED-DVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK-GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
S A+ D +Y + SA +L W+ V G +V FG ++ L ++ ++D T+ + + R RA L + +E I+ L+ Q+ L TLK + A+L+K + + ++ + A R F+F+ A L SL + + + L + F++S +A+ K + ++ +K K +RS+ + LGLV M+R DG+GNLQGF GY GPH + +G+ NDA P+ G + PLLR+QPKLN+DIEL
Sbjct: 162 SVTTAMLLCDDSYASIYRSARAKLMPWKGRVERGLLVDKFGTLASSLLEKTMSSYDVDTISAAGTPAAEYRLNVRAKLEARVEDAIRTLFESQIINLEKSTLKKFNASLLKQKNNKNEIDFDDNAAAKRSAAFAFDTAAQDLEVPSLSLRRAQFSQIIASKLDDALTNFSESNSAKMKDMMQIQKNSKKSKPSQRSLDYSLGLVAMIRPDGFGNLQGFAGYDIGPHKMIVGFHNDADAPETINQFGGIRPPLLRVQPKLNLDIEL 426
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9X0C9_PHATR) HSP 1 Score: 123 bits (308), Expect = 8.020e-30 Identity = 89/263 (33.84%), Postives = 137/263 (52.09%), Query Frame = 1
Query: 16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNE-ESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
A V +YG+ +A ++ SW+ G +V FG + L + F+ +T+ + + R +R L + ++T ++E++ Q+ L TLK + A L++ + D V + +S A LR+ F+FE L L EL A L + F DSPAA+ K +V+ V K K G+R V FG+ LV ++R DG+G+LQGF GY+ G +++T G NDA P G + PLLR+QPKL VD+EL
Sbjct: 49 AFVAVGQSYGKQARAARAKIVSWKARTARGLLVDAFGREAALLRNRVLGTFEKETLSAAGLPLVANYRLEQRTRLKALLDTAVEEVFVAQVHNLEQSTLKRFNAGLLRTMNDPVESVMDSNAAALRKETFTFETLMDDLEVPGLGLTKVKAARELTAKLNDALVAFPDSPAAKIKRTGRVNKVVNKEKKPGQRGVDFGVDLVAVLRPDGFGSLQGFAGYQMGGNSLTFGVHNDADDPQTIAQFGGVRPPLLRVQPKLRVDVEL 311
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZ76_PHATC) HSP 1 Score: 124 bits (312), Expect = 4.860e-29 Identity = 90/263 (34.22%), Postives = 138/263 (52.47%), Query Frame = 1
Query: 16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNE-ESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
A V +YG+ +A ++ SW+ G +V FG + L + F+ +T+ + + R +R L + ++T ++E++A Q+ L TLK + A L++ + D V + +S A LR+ F+FE L L EL A L + F DSPAA+ K +V+ V K K G+R V FG+ LV ++R DG+G+LQGF GY+ G +++T G NDA P G + PLLR+QPKL VD+EL
Sbjct: 276 AFVAVGQSYGKQARAARAKIVSWKARTARGLLVDAFGREAALLRNRVLGTFEKETLSAAGLPLVANYRLEQRTRLKALLDTAVEEVFAAQVHNLEQSTLKRFNAGLLRTMNDPVESVMDSNAAALRKETFTFETLMDDLEVPGLGLTKVKAARELTAKLNDALVAFPDSPAAKIKRTGRVNKVVNKEKKPGQRGVDFGVDLVAVLRPDGFGSLQGFAGYQMGGNSLTFGVHNDADDPQTIAQFGGVRPPLLRVQPKLRVDVEL 538
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZJ39_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.170e-27 Identity = 92/264 (34.85%), Postives = 135/264 (51.14%), Query Frame = 1
Query: 16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRFS----TSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKLLEDDVLNEESEANV--LRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAKAIQKVDTKVQKPK--GERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQPKLNVDIEL 780
A V +A+ SA ++ SW+ G FG + + R + FD +T+ + + R R L S +++ I EL+ Q++ L RT K + L+K L+ E + N +R + SFEA L SL ++E+ L + + F DSPAAQ K +KV V K K G+RSV GL LV ++R DG+G+LQGF GY+ G ++IT+G NDA P G + PLLR+QPKL VD+E+
Sbjct: 275 AFVAVSNAHAXQSRSARAKIASWKSRASRGLWAESFGFEAEAMRRRVLSGFDAETLLAAGLPLVAPYRLEMRNQLASLVDSSIVELFGAQVANLEKRTSKRLGSQLLKKLDSTPPEEVASENAAAIRAAMVSFEATMGDLEVPSLSLTKAKPCFDMESKLTDEAINFYDSPAAQIKRTKKVAEVVSKEKKPGQRSVDLGLDLVAVLRPDGFGSLQGFAGYQLGGNSITLGIHNDADDPATISQFGGVRPPLLRIQPKLRVDVEM 538
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Match: Hypothetical (protein (Fragment) n=4 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2ULW3_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.260e-21 Identity = 85/261 (32.57%), Postives = 129/261 (49.43%), Query Frame = 1
Query: 16 ALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVKAFDTKTVRF-----STSATRTTKRAALLSTMETGIKELYARQLSMLCARTLKSYKAALVKL------LEDDVLNEESEANVLRQTLFSFEADATSLVPDVFSLGFEDEYEELEADLQEFSEKFADSPAAQAK---AIQKVDTKVQKPKGERSVGFGLGLVGMVRQDGYGNLQGFTGYRAGPHTITMGYANDASLPDASGGAAG-KVPLLRLQ 753
A+ + A+ +A +L +W+ G V FG + L + ++ +D T+ S + R KR+ L+ +ET I++L+A Q+S L TL+ + A L++ D E + A +R F+F+ T L SL +EL L FADSPAA+ K AI+K K +KP ERS+ GL +V M+R DG+G QGFTGY+ G ++IT+G NDA P G + P +R+Q
Sbjct: 307 AMLACEDAFARHARTARAKLYAWKSRTSRGLRVEKFGALAEALLKRTMALYDNDTMAAAGYGSSVAPYRLEKRSKLVKKIETPIRQLFALQVSNLEKTTLQKFNAMLLRKHGKTSPATSDFYTENAAA--MRSAAFAFDTAMTDLEIPSLSLTKAKPSQELNGKLNSLLTGFADSPAAKLKLMKAIKKGANKQKKPT-ERSIDAGLDIVAMIRPDGFGTFQGFTGYQLGGNSITVGVHNDADDPGVISQFGGVRPPFIRVQ 564 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7097.15268.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7097.15268.1 >prot_E_fasciculatus_S2_contig7097.15268.1 ID=prot_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=258bp MVALYKVDSAYGEVMGSADMQLKSWRQSVGAGRVVADFGERSTKLYRSSVback to top mRNA from alignment at E_fasciculatus_S2_contig7097:2778..7527- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7097.15268.1 ID=mRNA_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4750bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7097:2778..7527- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7097:2778..7527- >mRNA_E_fasciculatus_S2_contig7097.15268.1 ID=mRNA_E_fasciculatus_S2_contig7097.15268.1|Name=mRNA_E_fasciculatus_S2_contig7097.15268.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=774bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7097:2778..7527- (Ectocarpus fasciculatus EfasUO2)back to top |