mRNA_E_fasciculatus_S2_contig7090.15264.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7090.15264.1
Unique NamemRNA_E_fasciculatus_S2_contig7090.15264.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPH5_9PHAE)

HSP 1 Score: 952 bits (2461), Expect = 0.000e+0
Identity = 488/579 (84.28%), Postives = 500/579 (86.36%), Query Frame = 1
Query:    1 SERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS---------------------------------------------------------------------------PRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPALDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDATFWRRESLLLPK 1512
            SERPMTF+TGEDFHVSHT+RKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATS                                                                           PRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA DG SMSSAALERVVTTATATYNEWM+DVQKPAATIKMGSNDPLYLSFLPALD AMVAAWHQPKISIHVITNDRL+SLMRLVKSLQDSH+LGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHP+TLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVN++YKDIPGVLVNGWSGSWKK+LFSLM+HNDWYLLYPGYKQ EQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDA+FW+RESLLLPK
Sbjct:  419 SERPMTFETGEDFHVSHTLRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSSSDVPLRDMLWMGALKAGSRMRWMDMFTAEEAHVDPAALLIIRTEADVRALVPLVSSFKDSLMWIDGAADESLGGPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAARDGSSMSSAALERVVTTATATYNEWMMDVQKPAATIKMGSNDPLYLSFLPALDPAMVAAWHQPKISIHVITNDRLTSLMRLVKSLQDSHFLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPVTLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNDKYKDIPGVLVNGWSGSWKKFLFSLMYHNDWYLLYPGYKQ-EQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDASFWKRESLLLPK 996          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPR1_ECTSI)

HSP 1 Score: 924 bits (2388), Expect = 0.000e+0
Identity = 465/481 (96.67%), Postives = 476/481 (98.96%), Query Frame = 1
Query:  184 MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA-GDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPALDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDATFWRRESLLLPKLEDLSKVSVKGQVVQAAKIPASTAYHRGDGGSRSRCV 1623
            MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAA GDG +MSSAALERVVTTATATYNEWM+DVQKPAATIKMGSNDPLYLSFLPALD AMVAAWHQPKISIHVITNDRLSSL+RLVKSLQDSH+LGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVN++YKDIPGVLVNGWSGSWKK+LFSLM+HNDWYLLYPGYKQ EQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDA+FWRRESLLLPKLEDLSK+SVKGQVVQAAKIPASTAYHRGDGGSRSR +
Sbjct:    1 MFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAAGDGSNMSSAALERVVTTATATYNEWMMDVQKPAATIKMGSNDPLYLSFLPALDPAMVAAWHQPKISIHVITNDRLSSLVRLVKSLQDSHFLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNDKYKDIPGVLVNGWSGSWKKFLFSLMYHNDWYLLYPGYKQ-EQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDASFWRRESLLLPKLEDLSKLSVKGQVVQAAKIPASTAYHRGDGGSRSRAI 480          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: uncharacterized (protein LOC107782982 n=2 Tax=Nicotiana TaxID=4085 RepID=A0A1S3Z4Z3_TOBAC)

HSP 1 Score: 242 bits (618), Expect = 8.890e-67
Identity = 180/582 (30.93%), Postives = 273/582 (46.91%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPT-GEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAA---------------AGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDP---------------------LYLSFLPA------LDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYKD-------IPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIG--KGSIKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLSK-VSVKGQVVQAAKI 1569
            E P TF TGED H+S+ ++KY N G++V+P + +D+ET G     L++V+  T            +    + ++ +    R  S  Y+  +A    E +D    A  + +        A+   L +    +  +A +++S   G    P + AA A                  G G  + ++  E  V  A     + ++ +  P+  I +   D                      L  S +P       L +  +  W++ +IS+++IT +R++SL RL+KSL D+HY+GDEV ++F++D   D   +  +   +WP G K I  RI +GGLI AV+ES++PS+  D+ + LEDDIEVSP FY W K+ LL Y Y  +   P            L+ ISLYTPR+ EV  +R      DF +        L Q PCSWG V+FP+ W   +  +     KD       IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI   +  IKH   D+ VPL KE    FW    +     LP L   ++ +S+KG     AK+
Sbjct:  356 ETPFTFMTGEDLHLSYQLQKYRNTGSFVLPVDPNDKETWGDSEHRLAYVSETT------------VIFKDVVQVRDDQWWRALSTGYITQWAAMYPEKIDALFYAHSINEVK------ALAPLLEKFRSTVGKKAYIIIS---GGNFCPCEDAATALKWPKAVCKERRFKIMDIGVGALLGTSNSEVPVVQAVYASMKGLIKIHNPSLVITVADADSNVKKALNMATEANTNSSTLVLLPRSSVPKVLWMADLRSTALPNWNRMRISVNIITQNRVNSLARLLKSLSDAHYIGDEVYITFNMDSKVDEATLKLVNSFNWPHGPKIIRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYFYLWIKYALLTYHYDPEILLP-----------ELSAISLYTPRLVEVVKERPKWNATDFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMNMRFTKDAKQNPVQIPRSRTNGWQASWKKFLIDMMYLRGYVTLYPNFPNQT-SFSTNHMEPGAHIAAKENVIKHNKVDFEVPLLKEDFRNFWPNGKMPAASKLPSLNLFNQPISLKGLKAAGAKL 904          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LKD7_9MAGN)

HSP 1 Score: 242 bits (617), Expect = 1.230e-66
Identity = 182/582 (31.27%), Postives = 272/582 (46.74%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPT-GEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAA---------------AGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLY----------------LSFLPA-----------LDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAAL---VNEEYK----DIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESLLLPKLEDLSKVSVKGQVVQAAKIPASTA 1584
            E P TF TGED H+S  ++KY N G++V+P N  D+ET G     L++V+  T            +    I ++ +    R  S  Y+  +A    + +D    A  V+       E+ V A L E   +   +   +V S  G    P +VAA A +                G G     +  E  V     +  + ++ +  P+  I + + DP                  L  LP            L +  +  W++ ++S+++IT +R SSL RL+KSL D++YLGDE+ +SF++D   DGE +  +   +WP G K +  RI +GGLI AV+ES++PS+  D+ + LEDDIEVSP +Y W K++LL Y Y    + P            L+ ISLYTPR+ EV  +R      +F +        L Q PCSWG V+FP+ W   +  +     E+ K     IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI      +KH   D+ VPL KE         S+ LP    L  +++  Q +    I A+ A
Sbjct:  355 ETPFTFMTGEDLHLSFQLQKYRNAGSFVLPVNPKDKETWGDSEHRLAYVSETT------------VIFKDIVQVRDDQWWRALSTGYVTQWAAMHSQKIDALFYAHSVE-------EVKVLAPLLEKFRSTVGKKAYIVVS--GGKFCPCEVAATALSWPMGVCRERRFKIFDLGIGSPSEVSDSEVPVLQGVYSSMKGLIRIHNPSVVITVSNIDPNVRKALQMASEANLNHSKLVLLPRSSVSKVLWMADLRSTALPNWNKMRLSVNIITQNRASSLTRLLKSLSDAYYLGDEIPISFNMDSKVDGETIKLVNSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYVLLAYHYDPQVSLP-----------ELSSISLYTPRLVEVVKERPKWNATEFFKRIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMNMRFTEDAKKNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQ-MSFSTNHMEPGAHISAKDNVVKHDKSDFEVPLLKEDFRGLL--PSMKLPPASRLPSLNLFNQALSLRGIKAAGA 901          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Salix viminalis TaxID=40686 RepID=A0A6N2L1X5_SALVM)

HSP 1 Score: 243 bits (621), Expect = 2.850e-66
Identity = 180/555 (32.43%), Postives = 273/555 (49.19%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTG----EAVDGWSAAQKVKKSHPAAYELAVTANLREVLY-AIKARAVLMVSSARGAGLSPAQVAAEAAAAGDGGSMSSAALERVV-------TTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPA-----------LDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLSK-VSVKGQVVQAAKI 1569
            E P+TF TGED H+S+ ++KY N G++V+P + +D+ET G     L++V+  T            +    I ++ +    R  S  Y+  +A       +A+    +  +VK   P   +   TA  + V+  A+ A    MV   R   +    V A+   +     +  A    V         TA  T ++   +V+K        +N+   +  LP            L +  +  W++ ++S+++IT +R  SL RL+KSL D++Y+GDE+ +SF+VD   D E +  +   +WP G K +  RI +GGLI AV+ES++PS+  DY + LEDDIEVSP +Y W K+ LL Y Y    + P            L+ ISLYTPR+ EV  +R      DF +        L Q PCSWG+V+FP+ W     A+++E   +IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI      +KH   D+ VPL KE   +F           LP L   ++ VS+KG     AK+
Sbjct:  354 EAPLTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT------------VIFKDIVQVRDDQWWRALSTGYVTQWAAMHPQKIDALFYAHSVDEVKALSPLIEKFRSTAGKKAVVSEAVSALWPKMVCKERRFKIFDLAVTAQTEISNSEVPVVQAVYSSVKGLIKTHNPTALITVSDIDPNVKKALKMATETNNNGTTMVLLPRPSISKVLWMADLRSTALPNWNKMRVSVNIITQNRAPSLTRLLKSLSDAYYVGDEIPISFNVDSKVDEETIRLVSSFNWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDYGLLLEDDIEVSPFYYLWIKYALLAYHYDPQVSLP-----------ELSSISLYTPRLVEVVKERPKWNATDFFKRVHPNTPYLHQLPCSWGSVFFPKQWR----AMLHEH--EIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQA-SFSTNHMEPGAHISAKDNVVKHDKTDFEVPLLKEDFRSFLPNGKFPPASKLPSLNLFNQPVSLKGLKAAGAKL 878          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3FPZ2_NOCCA)

HSP 1 Score: 236 bits (601), Expect = 1.730e-65
Identity = 175/592 (29.56%), Postives = 268/592 (45.27%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT-----------SPRWKLFMFSPTIGCTRIAELLNFSVKRFC---SFKYMRVFAPTGE------------AVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDP----------------LYLSFLPA-----------LDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAAL---VNEEYK----DIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLS-KVSVKGQVVQAAKI 1569
            E+P TF TGED H+S+ ++KY N G++V+P + +D+ET G     L++V+  T           +  WK      T   T+ A +    +       S   ++   P  E            AV G         +    +   V    R  ++ ++  A+L VS++                            E  V  A  +  + ++ +  P+  I +   DP                  L  LP            L +  +  W++ ++S+++IT +R  SL+RL++SL +++YLGDE+ +SF++D   D E +  +   DWP G K +  RI +GGLI AV+ES++P++  D+ + LEDDIEVSP +Y W K+ LL Y Y    + P            L+ ISLYTP+I EV  +R      +F +    +   L Q PCSWG V+FP+ W   +  +     E  K     IP    NGW  SWKK+L  +M+   +  LYP +  Q QSF+TNHME G HI      +KH   D+ VPL K+    F   + L     LP L   +  VS+KG     AK+
Sbjct:  163 EKPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETTVIFKNIVEVRDNQWWKALS---TGYITQWAAMYPHKIDALFYAHSIDEVKALGPLLEKFRTTVGKKAYLAVSGGKFCPCEDAASALNWPKVVCKERRFKIFDLEVGAILGVSNS----------------------------EVPVLQAVYSSMKGLIKIHNPSVVITLADADPNVKKALKMATETNPNGTALVLLPRASISKVLWMADLRSTALPNWNKMRVSVNIITQNRAQSLLRLLRSLSNAYYLGDEIPISFNMDSKVDEETIRVVTTFDWPHGPKTLRRRIIQGGLIRAVSESWYPASDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQISFP-----------ELSSISLYTPKIVEVVKERPKWNPTEFFKQIHPHTPYLHQLPCSWGAVFFPKQWREFYVYMNMRFTENAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVTLYPNFPNQ-QSFSTNHMEPGAHIAAKDNVVKHDKTDFEVPLLKDDFRNFLPSQKLPPASKLPSLNLFNIPVSLKGLKAAGAKL 711          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: uncharacterized (protein LOC103501011 isoform X1 n=10 Tax=Cucurbitaceae TaxID=3650 RepID=A0A1S3CHM8_CUCME)

HSP 1 Score: 238 bits (608), Expect = 2.660e-65
Identity = 180/584 (30.82%), Postives = 275/584 (47.09%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTG-EAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAA-----------------AAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDP------------------LYLSFLPALDTAMVAA---------WHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAAL-------VNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLSK-VSVKGQVVQAAKI 1569
            E P TF TGED H+S+ ++KY N G++V+P +  D+ET G     L++V+  T            +    I ++ +    +  S  Y+  +A    + +D    A  V ++       A+   L +    +  +A ++VS  R     P +   +A                  A G    +S++  E  V  A     + ++ +  P+  I +   DP                  L L   P++   +  A         W++ KISI++IT +R+SSL RL+KSL+D++YLGDE+ +SF++D   D + +  +   +WP G K +  RI +GGLI AV+ES++P++  DY + LEDDIEVSP +Y W K+ LL Y Y    + P            L+ ISLYTPR+ EV  +R      +F +        L Q PCSWG V+FP+ W   +  +         E    IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI   +  +KH  ED+ VPL KE    +     L     LP L   ++ VS+KG     AK+
Sbjct:  376 ETPFTFATGEDLHLSYQLQKYRNAGSFVLPVDPKDKETWGDSEHRLAYVSETT------------VIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQKIDALFYAHSVDEAK------ALAPLLEKFRSTVGKKAYIVVSGGR---FCPCEDVTDALKWPKLVCKERRFKIFDLAIGALSGLSNS--EVPVVQAVYASMKGLIKIHNPSVIITVADIDPNVKKALKMASEANLNGTTLILLPRPSISKVLWMADLRSTALPNWNKMKISINIITQNRVSSLTRLLKSLKDAYYLGDEIPISFNMDSKVDEKTIKLVSSFEWPHGPKSLRRRIIQGGLIRAVSESWYPASDDDYGLLLEDDIEVSPYYYLWIKYALLAYHYDPQISLP-----------ELSSISLYTPRLVEVVKERPKWNATEFFKRIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNSRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQA-SFSTNHMEPGAHISAKNNVVKHNKEDFEVPLLKENFVNYLPNGKLPAASRLPSLNLFNQPVSLKGLKSAGAKL 924          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TYA9_KALFE)

HSP 1 Score: 237 bits (605), Expect = 6.230e-65
Identity = 179/582 (30.76%), Postives = 272/582 (46.74%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTG-EAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEA-----AAAGDG---------GSMSSAALERVVTTATATYNEW--MVDVQKPAATIKMGSNDPLYLSFL----PALDTAMVAA----------------------WHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAAL---VNEEYKD----IPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESLLLPKLEDLSKVSVKGQVVQAAKIPASTA 1584
            E PMTF TGED H+S+T++KY N G+YV+P ++ D+ET G     L++V+  T       +F  T+      ++ +    +  S  Y+  +A    + +D    A  V        E+   A L E   +   R   +V S  G    P + A  A     +  G+          G+ +S   +  V      Y     ++ +  P+  I +   DP     L     A+  A V +                      W++ ++SI+++T +R+ SL RL+KSL D++YLGDE+ +SF++D   D   +  +   DWP G K +  RI +GGLI AV+ES++P++  D+ + LEDDIEVSP +Y W K+ LL Y Y    + P            L+ ISLYTPRI EV  +R      +F +        L Q PCSWG V+FP+ W   +  +     E+ K     IP    NGW  SWKK+L  +M+   +  LYP +  Q QSF+TNHME G HI      +KH   D+ VPL ++          + LP    L  +++  Q V    + A+ A
Sbjct:  364 EAPMTFMTGEDLHLSYTLQKYRNAGSYVLPVDASDKETWGDSEHRLAYVSETT------VIFKGTV------QVRDDQWWKALSTGYVTQWAAMNPQKIDAMFYAHSVS-------EVRALAPLLEKFRSTVGRKAYIVVS--GGSFCPCEEATAALGWPKSVCGERRFKIFDLNVGATTSGVSDSEVPVVQGVYASMKGLIKMHNPSVVITVDDIDPHVKKALRMAAEAVSNATVVSLPRPSVAKVLWMADLRPSALPNWNKMRLSINIVTQNRVGSLTRLLKSLTDAYYLGDEIPISFNMDSKVDEATIKLVGSFDWPHGPKTLRRRIIQGGLIRAVSESWYPASDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLP-----------ELSSISLYTPRIVEVVKERPKWNGTEFFKHIHPNTPYLHQLPCSWGAVFFPKQWREFYVYMNMRFTEDAKSNPVQIPKSRTNGWQASWKKFLIDMMYLRGYVALYPNFPNQ-QSFSTNHMEPGAHISAKDNVVKHDKSDFEVPLMRQDFRALL--PGMKLPPASRLPSINLFNQAVSLKGLKAAGA 910          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Uncharacterized (protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6LGQ5_HEVBR)

HSP 1 Score: 239 bits (610), Expect = 7.930e-65
Identity = 175/555 (31.53%), Postives = 266/555 (47.93%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPT-GEAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAAAAG--------------DGGSMSSAALERV-VTTATATYNEWMVDVQKPAATIKMGSNDPLYLSFLPALDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAALVNEEYKD-------IPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLSK-VSVKGQVVQAAKI 1569
            E PMTF TGED H+S+ ++KY N G++V+P + +D+ET G     L++V+  T            +    I ++ +    +  S  Y+  +A    + +D    A  V + +      A+   L +    +  +A + VS   G    P + AA A                  D G++S  +   V V  A  +  + ++ +  P+  I +   DP     L          W++  IS+++IT +R  SL RL+ SL +++YLGDE+ +SF++D   D   +  +   DWP G K +  RI +GGLI AV+ES++P++  DY + LEDDIEVSP +Y W K+ LL Y Y  + + P            L+ ISLYTP++ EV  +R      +F +        L Q PCSWG V+FP++W   +  +     KD       IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI      +KH   D+ VPL KE    F           LP L   ++ VS+KG     AK+
Sbjct:  354 ETPMTFMTGEDLHLSYQLQKYRNAGSFVLPVDPNDKETWGDSEHRLAYVSETT------------VIFKDIVQVRDDQWWKALSTGYVTQWAAMYPQKIDALFYAHSVDEVN------ALAPLLEKFRSTVGKKAYIAVS---GGTFCPCEDAATALKWPKLVCKERRFKIFDLDVGALSGISNSEVPVVQAVYSSMKGLIKIHNPSVVITVAGIDPNVKKALKMATETSTNDWNKMHISVNIITQNRAHSLSRLLNSLGNAYYLGDEIPISFNMDSKVDAATIRLVNSFDWPHGPKILRRRIIQGGLIRAVSESWYPTSDDDYGLLLEDDIEVSPYYYLWIKYALLAYHYDPEVSLP-----------ELSSISLYTPKLVEVVKERPKWNPTEFFKRIHPNTPYLHQLPCSWGAVFFPKLWREFYVYMNMRFTKDAKANPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQA-SFSTNHMEPGAHISAKDNVVKHDKSDFEVPLLKEDFRNFLPNGKFPPASKLPSLNLFNQPVSLKGLKSAGAKL 875          
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Match: Putative (nucleotide-diphospho-sugar transferase n=5 Tax=Lupinus TaxID=3869 RepID=A0A6A4R4V4_LUPAL)

HSP 1 Score: 236 bits (603), Expect = 1.210e-64
Identity = 183/584 (31.34%), Postives = 272/584 (46.58%), Query Frame = 1
Query:    4 ERPMTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAATSPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTG-EAVDGWSAAQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAAEAA-----------------AAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDP----------------LYLSFLPALDTAMVA-----------AWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEVELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPSTPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTTSLAGISLYTPRIEEVTAQRAH---LDFNRAASGYNALLFQTPCSWGTVYFPEVWMHLHAAL-------VNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQQEQSFATNHMEAGVHIGKGS--IKHLPEDYVVPLFKEGDATFWRRESL----LLPKLEDLSK-VSVKGQVVQAAKI 1569
            E P TF TGED H+S+ ++KY N G+YV+P +  D+ET G     L++V+  T            +    I ++ +    +  S  Y+  +A    + VD    A  V +        A+   L +  Y +  +A ++VS   G    P + AA A                  A G    +S++  E  V  A  +  + ++ +  P+  I     DP                  L  LP    + V             W++ +ISI++IT +R++SL RL+KSL +++YLGDEV ++F++D   D   +  L  ++WP G K +  RI +GGLI AV+ES++PS+  D+ + LEDDIEVSP +Y W K+ LL Y Y    + P            L+ ISLYTPRI EV  +R      +F R        L Q PCSWG V+FP+ W   +  +         E    IP    NGW  SWKK+L  +M+   +  LYP +  Q  SF+TNHME G HI      +KH  +D+ VPL KE    F     +     LP L   ++ +S+KG     AK+
Sbjct:  367 ETPFTFSTGEDLHLSYQLQKYRNAGSYVLPVDPKDKETWGDSEHRLAYVSETT------------VIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQKVDALFYAHTVDEVK------ALAPLLEKFRYTVGKKAYIVVS---GGNFCPCENAAAALKWPMLVCKERRFKIFDLALGALSGVSNS--EVPVVQAVYSSMKGLIKIHNPSVVITAADIDPNVKKALKMASETNSNGTTLVLLPRASVSKVLWMADLRSTALPNWNKMQISINIITQNRVNSLARLLKSLTNAYYLGDEVPITFNMDSKVDEATIKLLGSLEWPHGPKTLRRRIIQGGLIRAVSESWYPSSDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLP-----------ELSSISLYTPRIVEVVKERPKWNATEFFRPIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTENAKENPVQIPKSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQA-SFSTNHMEPGAHISAKDNVVKHNKQDFEVPLLKEDFRNFLPGMKMPPASKLPSLNLFNQPLSLKGLKAAGAKL 915          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7090.15264.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized0.000e+084.28protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized0.000e+096.67protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
uncharacterized8.890e-6730.93protein LOC107782982 n=2 Tax=Nicotiana TaxID=4085 ... [more]
Uncharacterized1.230e-6631.27protein n=1 Tax=Coptis chinensis TaxID=261450 RepI... [more]
Uncharacterized2.850e-6632.43protein n=1 Tax=Salix viminalis TaxID=40686 RepID=... [more]
Uncharacterized1.730e-6529.56protein (Fragment) n=2 Tax=Noccaea caerulescens Ta... [more]
uncharacterized2.660e-6530.82protein LOC103501011 isoform X1 n=10 Tax=Cucurbita... [more]
Uncharacterized6.230e-6530.76protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787... [more]
Uncharacterized7.930e-6531.53protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepI... [more]
Putative1.210e-6431.34nucleotide-diphospho-sugar transferase n=5 Tax=Lup... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7090contigE_fasciculatus_S2_contig7090:120..7067 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score929.5
Seed ortholog evalue7.2e-268
Seed eggNOG ortholog2880.D8LPR1
Model size1623
Hectar predicted targeting categoryother localisation
Exons11
EggNOG OGs2CMCB@1,2QPYF@2759
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-18_002160.1
Cds size1611
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7090.15264.1prot_E_fasciculatus_S2_contig7090.15264.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7090 132..7067 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842370.1978006-UTR-E_fasciculatus_S2_contig7090:119..1311696842370.1978006-UTR-E_fasciculatus_S2_contig7090:119..131Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7090 120..131 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842370.2093325-CDS-E_fasciculatus_S2_contig7090:131..2821696842370.2093325-CDS-E_fasciculatus_S2_contig7090:131..282Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 132..282 +
1696842370.2182093-CDS-E_fasciculatus_S2_contig7090:1366..14061696842370.2182093-CDS-E_fasciculatus_S2_contig7090:1366..1406Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 1367..1406 +
1696842370.2274225-CDS-E_fasciculatus_S2_contig7090:1566..16571696842370.2274225-CDS-E_fasciculatus_S2_contig7090:1566..1657Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 1567..1657 +
1696842370.2377334-CDS-E_fasciculatus_S2_contig7090:1941..20251696842370.2377334-CDS-E_fasciculatus_S2_contig7090:1941..2025Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 1942..2025 +
1696842370.2482102-CDS-E_fasciculatus_S2_contig7090:2475..26481696842370.2482102-CDS-E_fasciculatus_S2_contig7090:2475..2648Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 2476..2648 +
1696842370.259049-CDS-E_fasciculatus_S2_contig7090:3021..31391696842370.259049-CDS-E_fasciculatus_S2_contig7090:3021..3139Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 3022..3139 +
1696842370.269905-CDS-E_fasciculatus_S2_contig7090:3760..39101696842370.269905-CDS-E_fasciculatus_S2_contig7090:3760..3910Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 3761..3910 +
1696842370.2804286-CDS-E_fasciculatus_S2_contig7090:4496..47811696842370.2804286-CDS-E_fasciculatus_S2_contig7090:4496..4781Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 4497..4781 +
1696842370.2908957-CDS-E_fasciculatus_S2_contig7090:5519..57771696842370.2908957-CDS-E_fasciculatus_S2_contig7090:5519..5777Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 5520..5777 +
1696842370.3006513-CDS-E_fasciculatus_S2_contig7090:6357..65071696842370.3006513-CDS-E_fasciculatus_S2_contig7090:6357..6507Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 6358..6507 +
1696842370.310539-CDS-E_fasciculatus_S2_contig7090:6956..70671696842370.310539-CDS-E_fasciculatus_S2_contig7090:6956..7067Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7090 6957..7067 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7090.15264.1

>prot_E_fasciculatus_S2_contig7090.15264.1 ID=prot_E_fasciculatus_S2_contig7090.15264.1|Name=mRNA_E_fasciculatus_S2_contig7090.15264.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=537bp
MTFDTGEDFHVSHTMRKYANIGTYVMPFNSDDEETKGSKFRGLSFVNAAT
SPRWKLFMFSPTIGCTRIAELLNFSVKRFCSFKYMRVFAPTGEAVDGWSA
AQKVKKSHPAAYELAVTANLREVLYAIKARAVLMVSSARGAGLSPAQVAA
EAAAAGDGGSMSSAALERVVTTATATYNEWMVDVQKPAATIKMGSNDPLY
LSFLPALDTAMVAAWHQPKISIHVITNDRLSSLMRLVKSLQDSHYLGDEV
ELSFHVDVDADGELMDYLMGVDWPFGDKQIHHRIQRGGLISAVTESFHPS
TPHDYAIFLEDDIEVSPAFYAWSKHLLLRYRYSSDAAHPITLNANTMPTT
SLAGISLYTPRIEEVTAQRAHLDFNRAASGYNALLFQTPCSWGTVYFPEV
WMHLHAALVNEEYKDIPGVLVNGWSGSWKKYLFSLMFHNDWYLLYPGYKQ
QEQSFATNHMEAGVHIGKGSIKHLPEDYVVPLFKEGDATFWRRESLLLPK
LEDLSKVSVKGQVVQAAKIPASTAYHRGDGGSRSRCV
back to top

mRNA from alignment at E_fasciculatus_S2_contig7090:120..7067+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7090.15264.1 ID=mRNA_E_fasciculatus_S2_contig7090.15264.1|Name=mRNA_E_fasciculatus_S2_contig7090.15264.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6948bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7090:120..7067+ (Ectocarpus fasciculatus EfasUO2)
AGCGAGCGGCCGATGACCTTCGATACAGGGGAAGACTTCCACGTCTCTCA CACCATGCGCAAGTACGCCAACATCGGTACGTACGTGATGCCGTTCAACT CCGACGACGAAGAGACCAAGGGCAGCAAGTTCAGGGGGCTGTCCTTCGTG AACGCGGCCACCAGTAGCAGGTGAGAAAAGCGTCCTAGACGAAAACAAAT TTGAGGCAGGCATGTACAAGACCGGTGGTCATATTGTAGGTGGTATGCAT AGATAGCCTCTAACACCTCCTAGCGGCTTATGTTAGCAGTGCGAATCTCG GTGAGGTTTTTGATTATTCAACGATTTGTGCCTTGTGGTGAAGAGCGCGT ATTGGTGACTGAGCTCGAGGGAGAGAACCACTAGAACCTTTTCCGATTTA AAAATGACGGGAGGTCTTCAGAGTGAGAGGCAATGCCGAAGGGGAATTAG AGACCGACGGTTATAACGTGGGTTGGGTGGGATGACCAGAAACATTGCAT TGTTAGTGACGACCCCCCCCCCCTCTAACCCTGTATTTTTTCAGCGATGT TCCCCTTCGGGACATGCTGTGGATGGGGGCCCTCAAGGCGGGCAGCCGCA TGAGGTGGATGGACATGTTCACCGCTGAGGAGGCTCACGTGGACCCTGCG GCCCTGCTCATCATCCGCACCGAGGCGGACGTTAGGGCCCTGGTGCCACT GGTGAGTGGAGCCTGATGCTTGGAGCTTGGCTTGGTGGTGGTGGTGGCAG TGGTTGATGAAAGGTGGCTACGATAGTTGGTAGTTGTGTTTTTAAAGAAA AAATACAAGTACAAACGCCGAAAGACTACCCGTTCGAGAAAAAGCCGCAG TCGAAGGGGATGTGTTTTTATTAATAGCATTGCTTGGTGGATGTTTGGTG GTGGTGATGGGGGGGGGGTGGTTGACATGGTTACCGTTGTGGGTGATTGT CCGCTGTTTTGTGAGCATTGCTTGATCGGTGTTTGGTGGTAATTATGGTG AATACACCGCGTATGGTGGTCCGGGTGCAGGTGGGATGCGGTGATGTTGG TAGTGGTAGTCACGCCACGTGTTGGGTGCTACATGTAGCAGCGGCAGCGT GGTGTGGTTTCGTGTGCGACATGCTGTATCCAACTCACCTCACCCTTGGC GCGCGCTCTTTTTTCCCGTTTTTGTTTTTTGTCAAGGTAACGTCGTTCAA GGATTCCTTGATGTGGATCGACGGCGCTGCCGACGAGAGCCTTGGAGGCC CTCGATGGAAGCTCTTCATGTTCTCCCCTACGATCGGGTAATTGATCCTT CTGGTATTGTGAAGTTATTGATGTCGGGGCGAATATTCTTATCAGTATAT TCAACCAAAAGAGGTTCCAGAACATTAGAAACGCCTGTGCGACTTAAAGC TCACCTCCGAACTGCCGGCTTTCCCCCCTTCCCCCCTTGTCGTGCAGGTG CACAAGAATCGCGGAGCTGTTGAACTTCAGCGTGAAGCGGTTCTGCTCCT TCAAGTACATGCGAGTCTTCGCGCCCACCGGCGAGGCTGTGAGTTGCAGT AGCAGTAGTACACCATTTCACAGCGGTGGTTGGCTGACTTCGTATGAAGG AAGCTGTATTTCGATATTGTCATTAGCACTGCTCTTCAGACCCAACAACA TATCCCGTGGTTGTACACCGCCGGTCATGTCGAACGGAACATTTTTGTTT TTTTTTGTGCTCTCTGTTGTTGGGTGGGCAGAGAGCTGTTGTTGGGTCCT TCATTTTTGTGTTTGTCGTCACCATGTCATTTTGTGACGCTATTTTCCTT CTTCCCCCCTTTTTTTTGAAAGGTGGACGGGTGGAGCGCGGCGCAGAAAG TGAAGAAGTCGCACCCCGCGGCCTACGAGCTGGCCGTTACGGCTAACCTG CGAGAGGTGAGTGGGGGATGTGCAGTGCCGTGCCTTGCCACCTTGATGGA TGGATTGCATCGGCTAGATTGGGCACGGACAGACAGTGATGAAGAGGCGT GGCGTCACACATGACATGACTTTCACGATGAGACATGTGCCCTTGGTCGA TAGAATAGCTGAAACGGTACCAAACCCAACCAGAGGCGTATGCACAGCAC GACTTGGACATACTCACGATCACGATACCTCACGCCGACACGAGAAGAAC GAACGAACGAATGAATGAATGAACGACGGCGATGACGGCAATGACTAACA CACCGAGGTTTTGCAAAACACGCCCGTGCACAGGAGCCATAGGAGTTTAG TACGCTCATGTGCCGAACGAAGAATGTCGTTCATTTCCAATTGTTTCCTT ACCGCACTGCGTGTCCATGGATGTGTGTGGTGATCGTGATGGTGATGTCT ACGTAGGTGCTGTACGCGATCAAGGCGCGGGCGGTGCTGATGGTGAGCTC GGCCAGGGGGGCGGGCTTGTCGCCCGCCCAAGTGGCAGCCGAGGCGGCGG CGGCGGGAGACGGGGGCAGCATGTCTTCGGCGGCGCTGGAGCGCGTCGTG ACGACCGCAACAGCCACGTACAACGAATGGTGAGGGCGAGATACCTCTTG TGGTGATCGTTGTTGTTGTTGTTGTTGTTTGGAGGGTAAAGCGAGCAAGG GATATTTGGCAGTCTTGTTGGAGTGTTTTTTGGCGTGGCAACCTTTGCAT GCGGTAGGGCGGTAGGTCGGTAGTTGCACTCCCGAATGTTGAATGTTGAG TTTTCCCTTTTGAACACGACAAATGTTCCCTTATACGGCTATTGGTTTTG GTCCGTCTGATGATGTTGATGGACGTCCGTTTTCCAATGGCAATGCCATA TCGCTTTGCTGCTCTCTTTTTGATTCACTTGATCGGGATGACGTACGTTT TCCATGACCATGTCGCTTGCTGCTGGTGTTTGTTTTTGATTCGGTTTACC AGGATGGTGGACGTTCAGAAGCCGGCCGCCACAATCAAGATGGGGTCGAA CGATCCGCTGTACCTCAGCTTCCTTCCCGCCCTTGACACCGCGATGGTCG CCGCTTGGCATCAGCCCAAGGTATGTGTGTTGGATGGGGGATAGCACCGC TGGGGTTGTTGCTGTGACTCGTTGCTGTTGCGAGAATTTTGTTGCGACGT GGTGACTTTCACAGCCGGCCTTTCCCTGTAATCGACCGTGTGGTTGTTTT CATTTTTGGCCGCTGAAAGTCGAAAGTTGCCACAATCCGCAGCACTACAA GCTGTTGGTGAACGTGTCCCGTTGTTGCTGTTGGACTTCTTCTGGGTCAG TAATTCCTTTTTTTTTTTTTTTTTTTTTTGTTCGGGGTGTTTGTTTCTTA ATGGGTTTTCCACCTGGTTGGCTTGCTCGTTTTGTTTCTTGCCTTTTTTT TTTTGCTCTATTCTTCTCGTTNNNNNNNNNNCTACAGTTTCCATAATCCG CAGCACTTCAAGCTGTTGGTGAACGTTTCCAGTTGTTGCTGTTGGACTTC TTCTGGGTCAGTAATTCCTTTTTTTTTTTTCTTTGGTGTTGTTCGGGGTG TTGGTTTCTGAACGGGATATCCACCGCGTTGGCATGCTCGCGTTGTTGCT CGCCTTTTCCTGTTTGCGCCATTAATCTCGGTTCATTCTTGCTGCTTGCT CTCTCTCTCTCTCGCTCTTGCTCTCTTCTCTCGTTTTTCAGATCAGCATC CACGTGATCACGAACGACCGGTTGAGTTCTCTCATGCGGCTGGTCAAGTC TCTCCAGGACAGCCATTACCTGGGCGATGAGGTGGAGCTGAGCTTCCATG TAGACGTGGACGCGGACGGAGAGCTTATGGACTACCTCATGGTGAGAAAG AGGTGCTGTGTTTGGCGGCACGCAGGGTCTATGTAGTGCAGAGCGCAGAA TGGCAAAGACGCAGTCATTACGTGTGGTGATAAACGTGTGGCGGCGCTTC TTCATGTTCACACAAGGACCCATAGACACAGCCTGTTGTAGAAGTTTAGA CGTTGTTGGTACCGTAACCGGTAGCTGTGTTTCGCACGAAATCACGTTTG CCCGATCATGGCATGAGCGCATCGATTATGGCATGCCGCGGTTCACCTCG GGCGTTGGGTGGTGCATGTACGGATACGTGCCGCGTTCTTGGGGTGTGCG CGTGCAAATTTTGTGTCGACTTCCAAGCGCTGTGGCTGAGATGAGTCCCG GTAGCACTCACTCCACGCACTCACCGCACCCTTGCCTTGTCGCACTGCTT CATCTATACCGTCAAGTTCAACCATCGTGCGCATGCTATGGACCCCGTCC ATCGATCGCATACCATCAAAATCACCCTTGGCATACCACCAAAACCAACC ATGGAAACCAACCATGGTCGATCGTCTCATCCCATCAACATTCAATTTGT CCGTCGTCGTGTCTCATGAACTCTCAGGGCGTCGACTGGCCCTTCGGAGA CAAGCAGATCCACCACCGCATCCAGCGGGGCGGGCTCATCTCGGCCGTGA CGGAGTCGTTCCACCCGTCGACCCCGCATGACTACGCCATCTTCCTCGAG GACGACATCGAGGTCTCGCCCGCGTTCTACGCTTGGTCCAAGCACCTGCT GCTGCGTTACCGCTACAGCTCCGACGCGGCCCACCCCATCACGCTCAACG CGAACACCATGCCCACGACGTCTCTGGCGGGTATCAGCCTGTACACCCCT CGGATCGAGGAGGTGAGAGAGGTGTTTGGAGCGGGAGGCATTACATGTAG GGGGGGGAGTCCAACCGCGCTATGTGGTGAAGGTTAAGGTTGATGCCCTT GCTCTCCTTATCGAGTTGGTGGGTCTGTCGTGTGATTGGTGGTATGGTTT TGGATTGGATATTTTGATGTCGGCCGTTGTTCGCGCGAAGCCTTGAGGGT GCAGCATGCCGATCGCACAACCCTGTTGCTCGCGTAGGGTTCAAGAGGAT CGAATGCCAAGTGGAGAAACAGCCAAGGACTGCTTTGGATGACGTGCGTG CTGACACACAACTCGAGCCCGCGTTCCTATGTACAACGAAACCCCCCGAC AAATCTCCGCCGGAAAACGGAGGAAACCGCACCAGAACAGCAGTGCTCAA TCCCCCCCACCTACCCTGGATTAGTACGGAGAGATTGAGACAGAAGGAGG TACTGGATAGAGGGACCGGGATGGTTTTTAATGTGAAGACACCACCAACA ACAACAACCGTCCTCTCGAGGAGAGGACGCGTGGTCAATGCTCTACAGCT ACGGCTTGCGAAAACATCACTACCCCCCCCCCCCCCCCCCCCCCCCCCCA CTTTTTTTTTTTTTTTTTTTTTTTTTTGGTTGCCCCCCCCGCCCCCCCCC CCTCCCCTCCCCCCGCGCCGCCCCNNNNNNNNNNATGGGTAAAAAAGCAC ACCCCCCCCCCCCCAATCCTCGAAATATTTTTTATTTCGCGTTGAATCAG GTGACGGCCCAGCGAGCCCACCTCGACTTCAACCGTGCGGCCAGCGGCTA CAACGCTCTCCTGTTCCAGACCCCCTGCAGCTGGGGCACGGTGTACTTCC CGGAGGTGTGGATGCACCTGCACGCGGCGCTGGTGAACGAGGAGTACAAG GACATCCCGGGGGTGCTGGTGAACGGGTGGAGCGGCAGCTGGAAGAAGTA CCTCTTCTCTCTCATGTTCCACAACGACTGGTACCTTCTCTACCCGGGGT ACAAGCAGGTCTGTGTCTGTGTGTGCTTTTATTATTAGCATCGACCGCGC TAACCGGCTGACCAATGAGAAGACGTCAGTTGCAGTGCGGTGGAAAACAC AAAATGTTTCTTTAGTCCACTATCTGGGACCCCGGGACCGAGCGTCGTGG GGGAGGCTACGCTGCTCTCCGGATCAAAGACAGATACGGTAGCAACAACA GAAGAATGTGTGTGTGTGTGTGTGTGTGGTTATTGTTATCATTGACCGTG CTAACCCGCTGACCAATGAAAATACGCCAGTCTACGTGCGGTTGAAAACA CAATTCACTTTATAAAGGTCATCAACGGGAACCCCGCGAGGGGGCGGCAT GTGTGTGTGTGTGTGTGTGTGTGGGCGTTATTGTTTGTTGATTGACGAAG TTTGTCGTTGGCAGTCTGTCTTAACTGCTTTGTAGAGATGTGCTGCTTTT GTCTCGGTGGGCTACTTGCTCTGGCAACGGGTCGGTTTCAAGCCGGATGC GTTTTGGTCGAAGTGTGCGCCTTTGATTGCGTCTATTTTACTTTTTTTTT TCTTGCGCCTCGTTCGTTGTTGGGAATGCGCCGCCGAGCAGGAGCAAAGC TTCGCTACGAATCACATGGAAGCCGGCGTGCACATCGGAAAGGGCAGCAT CAAGCACCTCCCGGAGGACTACGTGGTACCGCTCTTCAAGGAGGGGGACG CCACCTTCTGGAGGCGGGAATCGCTTCTCCTCCCCAAGGTGCGGCAGGTT GTTGTTGTCGTCGTTGTTGTTCTGAATTTACTGCTGCTGCTGTGTTGTTG TTGTTGTGCTGCACCTGCTGTGTTTGTGGTGGAAGCCGTCCTCTGACCGA TGCGACGTCCGAGTTTATCGATATCGATATCTTGGTTTTCCCTGCCATTG AAGGATGACCATTTTCCTGTGATGGGCGAACGAGGACCCCTCTCGCAAGC CCTTCCCTCCGAATGCTCCCGATGGATTCTCAGCACCGTGCTGTGGCGGC CGGTGCCGTTACGTTTGCAAGAAAACACTGACCCAAGTATAACCTCGTCG TTTTCCTTAGTTTGGCTGCGTGTCAAAGCTCTTGTCTGGTTGCAGGCAGG GTATTCACCGACTGCTTCTGTTTTTGTCCGTTGATTTTTTATCTCGTCGT ATTCGTGCACGTGCGTGTGCTTGCTCTGCCACCGCAGTTGGAGGACCTAT CGAAGGTGTCGGTGAAGGGACAGGTGGTTCAGGCCGCCAAGATCCCAGCA AGTACCGCTTACCATCGCGGGGACGGTGGATCACGGTCAAGGTGTGTT
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7090:120..7067+

>mRNA_E_fasciculatus_S2_contig7090.15264.1 ID=mRNA_E_fasciculatus_S2_contig7090.15264.1|Name=mRNA_E_fasciculatus_S2_contig7090.15264.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1611bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7090:120..7067+ (Ectocarpus fasciculatus EfasUO2)
ATGACCTTCGATACAGGGGAAGACTTCCACGTCTCTCACACCATGCGCAA
GTACGCCAACATCGGTACGTACGTGATGCCGTTCAACTCCGACGACGAAG
AGACCAAGGGCAGCAAGTTCAGGGGGCTGTCCTTCGTGAACGCGGCCACC
AGCCCTCGATGGAAGCTCTTCATGTTCTCCCCTACGATCGGGTGCACAAG
AATCGCGGAGCTGTTGAACTTCAGCGTGAAGCGGTTCTGCTCCTTCAAGT
ACATGCGAGTCTTCGCGCCCACCGGCGAGGCTGTGGACGGGTGGAGCGCG
GCGCAGAAAGTGAAGAAGTCGCACCCCGCGGCCTACGAGCTGGCCGTTAC
GGCTAACCTGCGAGAGGTGCTGTACGCGATCAAGGCGCGGGCGGTGCTGA
TGGTGAGCTCGGCCAGGGGGGCGGGCTTGTCGCCCGCCCAAGTGGCAGCC
GAGGCGGCGGCGGCGGGAGACGGGGGCAGCATGTCTTCGGCGGCGCTGGA
GCGCGTCGTGACGACCGCAACAGCCACGTACAACGAATGGATGGTGGACG
TTCAGAAGCCGGCCGCCACAATCAAGATGGGGTCGAACGATCCGCTGTAC
CTCAGCTTCCTTCCCGCCCTTGACACCGCGATGGTCGCCGCTTGGCATCA
GCCCAAGATCAGCATCCACGTGATCACGAACGACCGGTTGAGTTCTCTCA
TGCGGCTGGTCAAGTCTCTCCAGGACAGCCATTACCTGGGCGATGAGGTG
GAGCTGAGCTTCCATGTAGACGTGGACGCGGACGGAGAGCTTATGGACTA
CCTCATGGGCGTCGACTGGCCCTTCGGAGACAAGCAGATCCACCACCGCA
TCCAGCGGGGCGGGCTCATCTCGGCCGTGACGGAGTCGTTCCACCCGTCG
ACCCCGCATGACTACGCCATCTTCCTCGAGGACGACATCGAGGTCTCGCC
CGCGTTCTACGCTTGGTCCAAGCACCTGCTGCTGCGTTACCGCTACAGCT
CCGACGCGGCCCACCCCATCACGCTCAACGCGAACACCATGCCCACGACG
TCTCTGGCGGGTATCAGCCTGTACACCCCTCGGATCGAGGAGGTGACGGC
CCAGCGAGCCCACCTCGACTTCAACCGTGCGGCCAGCGGCTACAACGCTC
TCCTGTTCCAGACCCCCTGCAGCTGGGGCACGGTGTACTTCCCGGAGGTG
TGGATGCACCTGCACGCGGCGCTGGTGAACGAGGAGTACAAGGACATCCC
GGGGGTGCTGGTGAACGGGTGGAGCGGCAGCTGGAAGAAGTACCTCTTCT
CTCTCATGTTCCACAACGACTGGTACCTTCTCTACCCGGGGTACAAGCAG
CAGGAGCAAAGCTTCGCTACGAATCACATGGAAGCCGGCGTGCACATCGG
AAAGGGCAGCATCAAGCACCTCCCGGAGGACTACGTGGTACCGCTCTTCA
AGGAGGGGGACGCCACCTTCTGGAGGCGGGAATCGCTTCTCCTCCCCAAG
TTGGAGGACCTATCGAAGGTGTCGGTGAAGGGACAGGTGGTTCAGGCCGC
CAAGATCCCAGCAAGTACCGCTTACCATCGCGGGGACGGTGGATCACGGT
CAAGGTGTGTT
back to top