mRNA_E_fasciculatus_S2_contig709.15261.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig709.15261.1
Unique NamemRNA_E_fasciculatus_S2_contig709.15261.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G642_ECTSI)

HSP 1 Score: 540 bits (1392), Expect = 5.670e-190
Identity = 278/295 (94.24%), Postives = 283/295 (95.93%), Query Frame = 2
Query:   44 MTKGVVLASCILLSCCFEPAAPFLQAGILGARTSHVALGSRQQQPVQHHV---YHRGQHQRETVRCFFSFGGGAKKGPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
            MTKG VLASC+LLSC FEPAAPFLQAGI GARTS+VALGSRQQ P+QHHV   +HR QHQRETVRCFFSFGGGAKKGPPANYDAIA+QAIAAVQAGLK GEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK KKAYVVCCQPGAKADFG GVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAET TVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA
Sbjct:    1 MTKGSVLASCVLLSCSFEPAAPFLQAGI-GARTSYVALGSRQQ-PLQHHVSRYHHRRQHQRETVRCFFSFGGGAKKGPPANYDAIAAQAIAAVQAGLKSGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKSKKAYVVCCQPGAKADFGIGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETTTVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 293          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID5_9STRA)

HSP 1 Score: 222 bits (566), Expect = 2.890e-65
Identity = 110/244 (45.08%), Postives = 163/244 (66.80%), Query Frame = 2
Query:  215 RETVRCFFSFG--GGAKKG---PPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKA--YVVCCQPGAKADFGSGVRGA-ADVRDI--NAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGA 916
            R+T+RCFF FG  G +  G   PP +Y A+ +QA AAV A LK G + MEV+FPPL +LNK+ DGSAKNR+L  E+  +F  KLV ++ K  K   +++CC+ G +    + ++G  A++ D+   AKN PPA AGDV V+VTP D  QW+LA+ M +TA VV+ NG+F NG+  F PVYYFKPISGWG +++ YP  +T +LA + +V+PC   ++  G++ RP+L   ++ L + + +++ A
Sbjct:   50 RDTIRCFFGFGAAGSSSTGKLKPPKDYAAVHAQAAAAVTAALKAGVQRMEVDFPPLQALNKMGDGSAKNRKLTLESNSAFVTKLVASLSKSVKGKVWIMCCESGTRQYLATSIKGGKAELIDMPSTAKNFPPAAAGDVHVIVTPGDISQWRLARDMGKTAPVVVCNGLFANGFEAFTPVYYFKPISGWGFLLKSYPADWTVFLAGTEEVLPCQVDMMGAGELLRPNLGKVSSLLQSEWGKREAA 293          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE4_9STRA)

HSP 1 Score: 211 bits (536), Expect = 5.540e-61
Identity = 110/249 (44.18%), Postives = 151/249 (60.64%), Query Frame = 2
Query:  203 GQHQRETVRC----FFSFGGG----AKKGPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGK-KAYVVCCQPGAKADFGSGV---RGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQG 913
            GQH  +T       FF  GGG    AK G P +Y+ +  QA+AAV A +K GEK MEVEFPPLA+LNK+ DGSAK+ ++ +E    FAKKLV ++   + K +VVCC+PG K      +       +V  ++++NLP A   DV++ +TP D  QWK+A K+ ETA VV+VNG+F NGY   EPVYY KP SGWG ++RQ+P  FT YL    K +     +++ G++RRPD       L + F  + G
Sbjct:   34 GQHGMQTRTSTSLNFFGMGGGGSAGAKTGVPTSYEEVHKQAVAAVGAAIKKGEKKMEVEFPPLAALNKLGDGSAKSAKMIKEANAEFAKKLVTSLTSSRSKVWVVCCEPGYKKMLEEAIGTQNKKVEVVPLSSRNLPDASPKDVLIFLTPGDDSQWKIAAKLGETAPVVVVNGLFNNGYGALEPVYYLKPFSGWGYLMRQFPNDFTVYLTGEKKPLDLKVTMMEMGNLRRPDSTVVGKVLQSEFMNRAG 282          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q2S3_HETAK)

HSP 1 Score: 157 bits (397), Expect = 1.180e-40
Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 2
Query:  263 GPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGK-KAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAG--DVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANS-NKVVPCDAGLVKQGDIRRPDLRSAANAL 886
            G P+NYDA+  QAI++V++ LK  ++A+EVEFPPL SLNK+ DGS K+++ A +    F +KL  A+ + K K ++VC + G K   G   R        +   L  ++ G  DVVV V P+D+ QW    ++++    ++VNGV  NGY  F+P YYFKPISG G +++QYP  F  Y A+S NK +  +   ++QG  +RPD R A  AL
Sbjct:   69 GVPSNYDALHQQAISSVKSALKKDKRALEVEFPPLTSLNKLGDGSRKSQQQALQGNADFTRKLCTALSQSKNKVWLVCYELGMKDAVGDYGRNNKVQVLTSRDKLDSSQFGSNDVVVAVGPSDESQWLSLARLSKVVPSIVVNGVCNNGYYLFDPCYYFKPISGRGYLIKQYPDNFKVYSASSPNKPLDVEVPFLEQGKFKRPDTRVAFAAL 280          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UD48_HEMAN)

HSP 1 Score: 117 bits (293), Expect = 9.570e-27
Identity = 71/208 (34.13%), Postives = 109/208 (52.40%), Query Frame = 2
Query:  263 GPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAI-GKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPIS----GWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRS 871
            G P +YD I +QAI A+  GL GG   MEVEFPP+ SLNK++DGSA ++R+ R   + F  K+  A+ G G   +++C     + +             +     PP+   DV++V  PAD  QW  +  ++ ++ VV +NG   NG+  FE  YY KP++      G ++R  PG +T Y +    +   D G V+     RPDL++
Sbjct:    1 GVPRSYDEIHAQAIDAIGVGLSGGVTRMEVEFPPIPSLNKLSDGSASSQRMVRNANVDFVLKVAEALSGSGWGVWILCGDSSTREEVVKRSLPPNTQVALLRDGPPPSGPSDVLLVHPPADISQWDYSASLSASSPVVALNGQQHNGHSSFEMAYYLKPMTFNSRTCGYLIRSLPGAWTVYDSQGADM-GVDVGFVQTASGFRPDLQA 207          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XHP6_9RHOD)

HSP 1 Score: 93.2 bits (230), Expect = 3.880e-18
Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2
Query:  269 PANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAK-NLPPAKAGDVVVVVTPADQGQWKLAKKMAETAT-VVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPF 781
            P +YD I + AIA+V+  L  G+ A E++FP L +LNK+NDGS ++   AR    SF  KLV ++ +  +  ++C      A   + ++ +   R  +   +       D+V+VV P+   QW ++  +      V++VNG   NG+   EPV+Y KP SG G ++R YP  F
Sbjct:   37 PKSYDEIHAFAIASVRKALTDGKTACEIDFPLLPALNKLNDGSEQSANQARVACSSFVAKLVQSLPQ--RTQILCFDRPVLAAVQNALKSSERSRLWSPTFDRLELDESDLVIVVMPSGADQWSMSLGLQSRCQGVIVVNGAINNGFDGLEPVFYLKPFSGRGFLLRCYPRDF 207          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVP8_9STRA)

HSP 1 Score: 73.2 bits (178), Expect = 1.530e-10
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 2
Query:  296 QAIAAVQAGLKGGEKA----MEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK----GKKAYVVCCQPGAKADFGSGVRGAADVRDINAKN-LPPAKAG--DVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGY--VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDI-----RRPDLRSAANALSAAFREQ 907
            QAI ++Q+ L          +E EFP LA+LNK+ DGS ++   A +  ++F KKLV  +      G K  ++     + +   +           + K+ +P    G  +V V +TP+ +  +++AK +AE++T  I+   F      VP +    YY KP++      G ++R YP  +T   A + KV+    G    G+I       PDLR +   + ++F E+
Sbjct:   83 QAIQSIQSALANPRDPSLPLVECEFPALAALNKLGDGSLRSTLEAEDANVAFVKKLVTGLAPAPFLGPKITIIVSSSASSSLLNNMKTQVKSATVFSLKDGMPDVSVGKDNVYVCLTPSSRNDFQVAKSLAESSTPAIIVNAFAKDQKSVPEDATMAYYLKPLTYNSQVAGFLIRSYPSNWTVLDAQTKKVL----GSFTDGEILVPKTNTPDLRKSVKLVQSSFDER 306          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKK8_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 1.900e-9
Identity = 72/265 (27.17%), Postives = 118/265 (44.53%), Query Frame = 2
Query:  209 HQRETVRC-FFSFGG-GAKKGPPANYDAIASQAIAAVQAGLKGGEKA----MEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK-------GKKAYVVCCQPGA---KADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETAT---VVIVNGVFVNGY-VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPC--DAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
            HQ+  +R   FSFGG G     P+   A    AI + +  ++    A    +E+EFP LA+LNK+ DGS ++   A +  LSF  KL   I         G K  +      +   KA      +G   +   +        +G + + V+P  +G +  A+++A + T   VVIVN    +   +P +    Y+ KP++      G ++R YP  +T   A S  V+    D  ++ QG    PDLR++   +  +  E+  AA
Sbjct:   33 HQQSLIRLGLFSFGGSGENASVPSTTSARDKAAIESCKKAIERPRNADFPLIELEFPVLAALNKLGDGSLRSAMEAEDANLSFVGKLTKGISVPFPLSFGGSKVSIALSSSASNSFKAKAAKITKGTTILSASSPSLAEDVGSGGICIFVSPTSRGDYNSAQQLARSGTAKAVVIVNAFAKDPRSIPGDATMAYFLKPLTYNSQVAGYLIRSYPSNWTVLDATSKAVLGTFSDGEILVQGT-NTPDLRASGRIVQKSVDERAIAA 296          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEC6_THAPS)

HSP 1 Score: 68.2 bits (165), Expect = 5.860e-9
Identity = 69/235 (29.36%), Postives = 105/235 (44.68%), Query Frame = 2
Query:  293 SQAIAAVQAGLKG----GEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGV---RGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETA-TVVIVNGVF-----VNGYVPF----EPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDI-----RRPDLRSAANALSAAFREQQGAA*STK 931
            +QAI++V+A L       +  +E EFP LA+LNK+ DGS ++   A +  ++FA   VG         V+     A   F   V   +G A V  +    +P  K  ++ V++ P+ Q  + +AK +AE     VIVNG F     V  Y       +P+ Y   I+G+  ++R YP  +T   A S  V+    G     +I       PDLR A      +  E+   A S K
Sbjct:   74 NQAISSVKAALTNPRTKSKPLIECEFPALAALNKLGDGSLRSSLEAEDANVAFATPFVGP------KVVLAVSSSASNSFLKKVQKKKGGAVVVSLKDGGVPGVKKDEICVILNPSSQRDYGVAKSLAEGGFKTVIVNGSFKDQKSVPDYATMAYFLKPLTYNSQIAGY--LIRSYPSLWTVLDAQSKAVL----GSFTDEEILVDRTNTPDLRGAVRLAQKSADERAIKARSGK 296          
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AX33_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 2.230e-7
Identity = 74/259 (28.57%), Postives = 117/259 (45.17%), Query Frame = 2
Query:  236 FSFGG--GAKKGPPANYDAIASQAIAAVQAGL----KGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAI-------GKGKKAYVVCCQPG-----AKADFGSGVRGAADVRDINAKNLPPAKAGD-VVVVVTPADQGQWKLAKKMAETAT---VVIVNGVFVNGY-VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPC--DAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
            F+FGG  G K   P+  +A    AI + +  +    +G    +E+EFP LA+LNK+ DGS ++   A +  L F  KL   I       G   K  +           +KAD  +   G A V   ++ +L      D V V V+P  +  +  A+K+A + +   VVIVN    +   VP +    Y+ KP++      G ++R YP  +T   A S  V+    D  ++ QG    PDLR++   +  +  E+  AA
Sbjct:   50 FNFGGNSGGKASIPSTTEARDKAAIESCKKAIGRPRQGDCPLIELEFPVLAALNKLGDGSLRSAMEAEDANLVFVGKLAKGISSFSLPFGSSGKVSIALSSSATNSFRSKADKIAKRSGTAAVLSASSPSLAEDVGSDGVCVFVSPTSRVDYTAAQKLARSGSAKAVVIVNAFAKDPRSVPGDATMAYFLKPLTYNSQVAGYLIRSYPSDWTVLDATSKAVLGSFSDKEILVQGT-NTPDLRASGRMVQKSVDERAIAA 307          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
DUF19955.670e-19094.24domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
DUF19952.890e-6545.08domain-containing protein n=1 Tax=Tribonema minus ... [more]
Hypothetical5.540e-6144.18protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical1.180e-4041.51protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical9.570e-2734.13protein n=2 Tax=Hemiselmis andersenii TaxID=464988... [more]
Hypothetical3.880e-1833.53protein (Fragment) n=1 Tax=Erythrolobus madagascar... [more]
Hypothetical1.530e-1027.19protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
DUF19951.900e-927.17domain-containing protein n=1 Tax=Pseudo-nitzschia... [more]
DUF19955.860e-929.36domain-containing protein n=1 Tax=Thalassiosira ps... [more]
Hypothetical2.230e-728.57protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig709contigE_fasciculatus_S2_contig709:17683..22364 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score540.8
Seed ortholog evalue3.9e-151
Seed eggNOG ortholog2880.D7G642
Model size1512
Hectar predicted targeting categorysignal peptide
Exons6
EggNOG OGs2E7SF@1,2SEB9@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-11_005050.1
Cds size879
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig709.15261.1prot_E_fasciculatus_S2_contig709.15261.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig709 18273..22321 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842369.9460123-UTR-E_fasciculatus_S2_contig709:17682..182721696842369.9460123-UTR-E_fasciculatus_S2_contig709:17682..18272Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig709 17683..18272 -
1696842370.0164242-UTR-E_fasciculatus_S2_contig709:22321..223641696842370.0164242-UTR-E_fasciculatus_S2_contig709:22321..22364Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig709 22322..22364 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842369.9586072-CDS-E_fasciculatus_S2_contig709:18272..183831696842369.9586072-CDS-E_fasciculatus_S2_contig709:18272..18383Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 18273..18383 -
1696842369.9694066-CDS-E_fasciculatus_S2_contig709:19211..194061696842369.9694066-CDS-E_fasciculatus_S2_contig709:19211..19406Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 19212..19406 -
1696842369.9788215-CDS-E_fasciculatus_S2_contig709:20096..202641696842369.9788215-CDS-E_fasciculatus_S2_contig709:20096..20264Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 20097..20264 -
1696842369.9879653-CDS-E_fasciculatus_S2_contig709:20681..207741696842369.9879653-CDS-E_fasciculatus_S2_contig709:20681..20774Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 20682..20774 -
1696842369.997075-CDS-E_fasciculatus_S2_contig709:21482..216091696842369.997075-CDS-E_fasciculatus_S2_contig709:21482..21609Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 21483..21609 -
1696842370.0064507-CDS-E_fasciculatus_S2_contig709:22136..223211696842370.0064507-CDS-E_fasciculatus_S2_contig709:22136..22321Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig709 22137..22321 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig709.15261.1

>prot_E_fasciculatus_S2_contig709.15261.1 ID=prot_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=293bp
MTKGVVLASCILLSCCFEPAAPFLQAGILGARTSHVALGSRQQQPVQHHV
YHRGQHQRETVRCFFSFGGGAKKGPPANYDAIASQAIAAVQAGLKGGEKA
MEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVC
CQPGAKADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLA
KKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYL
ANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA*
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mRNA from alignment at E_fasciculatus_S2_contig709:17683..22364-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig709.15261.1 ID=mRNA_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4682bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig709:17683..22364- (Ectocarpus fasciculatus EfasUO2)
TTTCAGCGACCCTTGCAAGCCGAGGAGATACCAATTCCACATCATGACGA AAGGTGTTGTGCTAGCTTCGTGCATCCTTTTGTCGTGCTGCTTCGAACCG GCGGCTCCGTTCCTCCAAGCCGGTATTTTAGGAGCACGAACATCGCATGT TGCACTTGGAAGCAGACAGCAGCAGCCGGTGCAGCATCATGTGTATCACC GTGGCCAGCACCAGCGAGAGACCGTAAGGTACAGCAGTACATATGATGAA GTGCCCAGCAAGGCAAGGGAAGCCTACCGTTGTTGGAGAGCCCGCTAGCT TGCAGTGGAGAGTGCGTGGGGAAGTTCTGTCAGTATGAATACGTCGTCGT GCAAGGTGCAGCGCATGTCATCTGGTACTTTTTTTTTTGCGGAGTTCTCC ATGCAACCGCCAGCAGGGCTCATGTTTACCGGGATGTTTGAATCTAACAC CGCCGTGATGTCCGTCCGAAGTTTGGTATCTTTTGGCCGGTCTGCAAATA CGATTTGTGTGGCGTATTGTGCTTTCCGCCGCATGCCACGGTGTAGATGC ACCCTCCTCGGACTGTACACGCTGGAGTAGTTTTCACCACAACCTCGCCC TCCTGGGTGTGAGACATGACACATGATACACTGCTGGACTGCTGTTCGTC GCACGGCATCTCGCGGCTTCTTCGACTACAACAGTAATACATCCGTCGTT GTCTCCGAACAATTTTCATCTTTTCAACCATCATGCACGTCTCCAACCCC AAAAGGTGTTTCTTCAGCTTCGGGGGGGGCGCGAAAAAGGGCCCCCCTGC CAACTACGACGCGATCGCGTCTCAGGCCATCGCTGCGGTGCAGGCGGGGC TCAAGGGCGGAGAGAAGGCAATGGAAGTCGAGGTTAGTCAGACCGATGCC TTTTCGTTGGTGCTGATGTTCTTCTCCCGCACGTCTTCACGTGGCTTCTC TCAGGAGGCCCGTACACCCACACGAATCGCACGAGGGCAACAGAGAGCAT AGGCGTAGTAGCTCTTTTGGTCTTGACAGCTCACAGCTCAAAGGTATTGA AGTGAAAAAATATCATATTTCTCTCCAGTTTTTCAGGGTTGACGAAGTGA GGGAGGGCCCTGGGAGGTTCGGCACGTCAAGGCAGATAAGAATTGCTGGC CGGGTACAGATGTTTCTCTCTCTATGTAAACACCACGCGCGACCTGCACG TTTGTGATGATTCTGTCTCTGGCTATCCTCTGTAGCTTCGGTGAGCATGG TTCGGCGACGGAATTGCCGAGCCGGACAGGGTCGGCGGAAGGCCAAAGGC TCATTCTTGATCGCCAACGGTGTGGAGGCGTTAATGGTCGACCCTCCGTC AAATGCATGTGTAGTTTCGTCCCGAATCATGTTCTGAATCGAGTAAATTC TGCCGACGTCGAATTCACTCGACTCCTTTCATGTACCGCTCCTGTCGCAC TGAAATGTGTCTTTGCCTCTGCCTCTCTCTCTCTCTCTCCTCCTCCTCTT CCTCATTCTCTTTCGCACCCTCCCTCCTCTCTCTGTCTCTGTCGCGTCCC CGCTCTATCTAACCTGAACTGCTTGTTTTCCTGCTTTTAGTTTCCCCCGC TGGCCTCCCTGAACAAGATCAACGACGGCAGCGCCAAGAACCGAAGACTG GCTCGGGAGAACACCCTCAGTTTCGCAAAGAAGGTGATACATGCTATCCA CTGAGTTGACGACGTTGTTCGTTGACATTCTAAAACCGTTGTGACCTCTA CCCAGCACCTGCACATTCCACGTTAGCTTTAGGTACCGCCGCTTGTTCTC CTTGTAGCCATTGTGTGTCCACTTAAAGTTGAGGCCTTCTGCCCCCAATC TTCCTCGTTCTGGACATTTCGCAGCGGGTACCCTGATCGGCTCCCGATGC CAATGAACGATTTTTTGGGGTTTGTTGATTCTGCTAGTGTATGAAAACAG CCAGTGTGAAACATTGGCGCCATGCCAGCCAGTGTATGAAACAATAGTTT CGCTTCTTGCTGCGGCGATTGTTTCGTGAGCTCCCATGTGTACCGTATCC CATAGCCCTGAGCACCTCGTTTGTCTCCCTCGTGTACGATTTTGCCACAG CTGGTCGGTGCGATCGGCAAGGGCAAGAAAGCGTACGTGGTGTGCTGCCA GCCAGGGGCGAAGGCCGACTTCGGCAGCGGGGTCAGGGGAGCGGCCGACG TGCGCGATATCAACGCCAAGAACCTGCCGCCGGCCAAGGCGGGGGACGTT GTGGTGGTGGTGACGCCGGTGAGGCAGCCGTGTCTACTGCTTTTCCGACG TACATATGTTTCGCAAGGATTCACACGCCCTGAGTCGATGCTTTAGGTGG GCTCAATCTCTCGATGAAACAGCAGTCGTTGCCAACACCACCCGATGTTC GGAGTGTTCTCGAATAACTCTGTTTGGATTTGCCGGTCTTTTCGCAGGAG ATCCTGGCCGTAGGAACACTGGTGAAAGGGTGTGTGGCACCGCTTGAGAT GTACAGAGTAGTCCGCTTGGGAGTAGGTGGGTGGGTGGATCGACCATGAC TCGGTGTTCCCTGTCGATGTAGCTGGTCATAACTGGCTCTTGGGGTTAAT TCGCTTGACGTGGGGGGACTGATTTGGGCACGACGAACATCGTTCCGCCG ACCAAGCCGAACGAACGAAACGTGTGAGCGGCACGCATTCGGTGAACTTC TCGGTAGGGCTGAATCGTTAGGGCAGGTTTGTGAGTGTCCTGGTTCATTT CGATTCCTGCCATGATGAATATTTGCGATTGTGTACCGATCGTTTCGTTT TGCGCTGTTTCCATGAGTAAAGCGCTTTTACCATATTGGAGGACCTGCTG TACCTCAGATTGCTTGCGGTATATTGACGGACGAGAATCTCTCCGGGCGT GTCTAGCGCACTAACCCCCCCCCCCCCCTGGTTCTATGCCGTGCAAATTG TCAGCCAGGCTGACCAGGGCCAGTGGAAGCTGGCAAAAAAAATGGCGGAG ACAGCCACTGTGGTTATCGTCAACGGCGTGTTTGTGAACGGCTACGTGCC CTTCGAGCCGGTGTACTACTTCAAGCCCATCTCCGGGTGGGGTTCCGTGG TTCGTCAGTACCCGGGCCCTTTTACGGCGTACCTGGCTAACTCGAACAAA GTGGTGAGAGGTGTTGTCGGTTGAGCCTTCTTTTTTTGTCTTCACTCCTC TTCTCTCTGCAAACGACCATCAAGGTGGGAACCAATCTCTCATGCAAGAG TAAGTTGATGGGTAGATAGGGGTGTATGACAAGAAAACACATGTAACGGT ATACTTACGACAGGTAAGATTCCTGATGGTAGGGGTGGCAGGTAGGTTGT TGAGTTGAGAGGCGAAAACTTCAATGTTAACTTGTTGAACCGATGGGCGC ATCATGGGTTATCATGGGTTATCATGGGTTATTAGACAGGAACAGATTAT GAGAAAAGGGCATTTTACGAAAATGAAAGTAGAAAACAAGAGTGTCCACG GAGGACAAACTTGGATGATTATAGGACATCGGTTGTCACTGAGAAAAAGA CAGTGAGTGAGGAGAGTGTAGTTAATCTGTAGAGGATAAATGAGGAAGGG TGTGCGTGTGTGTGCTCGTTTGTGCTTGCTGGGGTCATCGACTCGCATAC TTGCGTTGAAACAGAGCACGGTTCTCACCGAGGCAATTTGATCAACTTTG GGCGATCTTTGTACGTTTGCGCCCGTTTTTTCAATTTTCATGTACTTCAT CCCTTTCCTAATGGTCCGCATTTTGCGATCGCCGCCTCTCTCGTTAGGCA GCAGCACGACCGCACTCTGGCAATATTATAGAGTACCAAAGAGTAGGGGC ACAGGGCGAAGGGGGTTAGTCGGAACAAAATATGAAAAAAAAAAAAAAAT GGTCAACCCCCGCGCACCCTCACCGCACGTGCTGTCTGTATGTGTATCCT CTTTTTTCATGGTGTTCTGGATGCCGTTCAGGTTCCTTGCGATGCAGGAC TTGTCAAGCAGGGAGACATCCGAAGACCAGACCTAAGGAGCGCTGCCAAT GCCCTCAGCGCAGCGTTTCGAGAGCAACAAGGAGCAGCATAGTCCACTAA ACTGTAGCGGCATTCTCGGCACGCTCAGATTAACGATGGCAGGCGGACGT GATAAAATGCTGGCACACAGGGAATGTTACGAGCGCTAATTTTGTGCCTC TTTTTGTATGTGCAGCGAGCAGCAGCAGCAGCAGCAGCAGAGGAAGCCGC ACGGGTAAGGACAGAACGCGATTCTGCAACGTGCCGCGTTATTGTTTTAG GGCCTCTCCCTCGACCCACGCTGTTCTAACCTATAGAGAGGTCTTCGGAG GCAGACTAGTTTTCCTTGTTGAAGATTTGGTAGTGGTGTGGAATCGCTTG CAGCTGGGTGCTATCGATATAAAGGCAGGTACGCTGTGCTTTGCTAGAGA AGACTGAAGTTTGCTCAGCTTCGTGGGCCCTTCTCAAGGCAGGCACTGAT GGTTGGGACCTTGGCTAGGTTTTGTGCTGGTGAGGAGGAGCCAACAAAAC TTTGCTGGTGTGCTCTCTACGAAGATATCAACATCGCGAACGACCAACGC GAGCGTCGCGCCGGGTAGTTCACCGCTGTTGTCCAATGGCGGCGAAGCAA CCGGTGTATTCCACTCCTTCCTTGCACTGAAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig709:17683..22364-

>mRNA_E_fasciculatus_S2_contig709.15261.1 ID=mRNA_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=879bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig709:17683..22364- (Ectocarpus fasciculatus EfasUO2)
ATGACGAAAGGTGTTGTGCTAGCTTCGTGCATCCTTTTGTCGTGCTGCTT
CGAACCGGCGGCTCCGTTCCTCCAAGCCGGTATTTTAGGAGCACGAACAT
CGCATGTTGCACTTGGAAGCAGACAGCAGCAGCCGGTGCAGCATCATGTG
TATCACCGTGGCCAGCACCAGCGAGAGACCGTAAGGTGTTTCTTCAGCTT
CGGGGGGGGCGCGAAAAAGGGCCCCCCTGCCAACTACGACGCGATCGCGT
CTCAGGCCATCGCTGCGGTGCAGGCGGGGCTCAAGGGCGGAGAGAAGGCA
ATGGAAGTCGAGTTTCCCCCGCTGGCCTCCCTGAACAAGATCAACGACGG
CAGCGCCAAGAACCGAAGACTGGCTCGGGAGAACACCCTCAGTTTCGCAA
AGAAGCTGGTCGGTGCGATCGGCAAGGGCAAGAAAGCGTACGTGGTGTGC
TGCCAGCCAGGGGCGAAGGCCGACTTCGGCAGCGGGGTCAGGGGAGCGGC
CGACGTGCGCGATATCAACGCCAAGAACCTGCCGCCGGCCAAGGCGGGGG
ACGTTGTGGTGGTGGTGACGCCGGCTGACCAGGGCCAGTGGAAGCTGGCA
AAAAAAATGGCGGAGACAGCCACTGTGGTTATCGTCAACGGCGTGTTTGT
GAACGGCTACGTGCCCTTCGAGCCGGTGTACTACTTCAAGCCCATCTCCG
GGTGGGGTTCCGTGGTTCGTCAGTACCCGGGCCCTTTTACGGCGTACCTG
GCTAACTCGAACAAAGTGGTTCCTTGCGATGCAGGACTTGTCAAGCAGGG
AGACATCCGAAGACCAGACCTAAGGAGCGCTGCCAATGCCCTCAGCGCAG
CGTTTCGAGAGCAACAAGGAGCAGCATAG
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