mRNA_E_fasciculatus_S2_contig709.15261.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G642_ECTSI) HSP 1 Score: 540 bits (1392), Expect = 5.670e-190 Identity = 278/295 (94.24%), Postives = 283/295 (95.93%), Query Frame = 2
Query: 44 MTKGVVLASCILLSCCFEPAAPFLQAGILGARTSHVALGSRQQQPVQHHV---YHRGQHQRETVRCFFSFGGGAKKGPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
MTKG VLASC+LLSC FEPAAPFLQAGI GARTS+VALGSRQQ P+QHHV +HR QHQRETVRCFFSFGGGAKKGPPANYDAIA+QAIAAVQAGLK GEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK KKAYVVCCQPGAKADFG GVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAET TVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA
Sbjct: 1 MTKGSVLASCVLLSCSFEPAAPFLQAGI-GARTSYVALGSRQQ-PLQHHVSRYHHRRQHQRETVRCFFSFGGGAKKGPPANYDAIAAQAIAAVQAGLKSGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKSKKAYVVCCQPGAKADFGIGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETTTVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 293
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CID5_9STRA) HSP 1 Score: 222 bits (566), Expect = 2.890e-65 Identity = 110/244 (45.08%), Postives = 163/244 (66.80%), Query Frame = 2
Query: 215 RETVRCFFSFG--GGAKKG---PPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKA--YVVCCQPGAKADFGSGVRGA-ADVRDI--NAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQGA 916
R+T+RCFF FG G + G PP +Y A+ +QA AAV A LK G + MEV+FPPL +LNK+ DGSAKNR+L E+ +F KLV ++ K K +++CC+ G + + ++G A++ D+ AKN PPA AGDV V+VTP D QW+LA+ M +TA VV+ NG+F NG+ F PVYYFKPISGWG +++ YP +T +LA + +V+PC ++ G++ RP+L ++ L + + +++ A
Sbjct: 50 RDTIRCFFGFGAAGSSSTGKLKPPKDYAAVHAQAAAAVTAALKAGVQRMEVDFPPLQALNKMGDGSAKNRKLTLESNSAFVTKLVASLSKSVKGKVWIMCCESGTRQYLATSIKGGKAELIDMPSTAKNFPPAAAGDVHVIVTPGDISQWRLARDMGKTAPVVVCNGLFANGFEAFTPVYYFKPISGWGFLLKSYPADWTVFLAGTEEVLPCQVDMMGAGELLRPNLGKVSSLLQSEWGKREAA 293
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XUE4_9STRA) HSP 1 Score: 211 bits (536), Expect = 5.540e-61 Identity = 110/249 (44.18%), Postives = 151/249 (60.64%), Query Frame = 2
Query: 203 GQHQRETVRC----FFSFGGG----AKKGPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGK-KAYVVCCQPGAKADFGSGV---RGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRSAANALSAAFREQQG 913
GQH +T FF GGG AK G P +Y+ + QA+AAV A +K GEK MEVEFPPLA+LNK+ DGSAK+ ++ +E FAKKLV ++ + K +VVCC+PG K + +V ++++NLP A DV++ +TP D QWK+A K+ ETA VV+VNG+F NGY EPVYY KP SGWG ++RQ+P FT YL K + +++ G++RRPD L + F + G
Sbjct: 34 GQHGMQTRTSTSLNFFGMGGGGSAGAKTGVPTSYEEVHKQAVAAVGAAIKKGEKKMEVEFPPLAALNKLGDGSAKSAKMIKEANAEFAKKLVTSLTSSRSKVWVVCCEPGYKKMLEEAIGTQNKKVEVVPLSSRNLPDASPKDVLIFLTPGDDSQWKIAAKLGETAPVVVVNGLFNNGYGALEPVYYLKPFSGWGYLMRQFPNDFTVYLTGEKKPLDLKVTMMEMGNLRRPDSTVVGKVLQSEFMNRAG 282
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1Q2S3_HETAK) HSP 1 Score: 157 bits (397), Expect = 1.180e-40 Identity = 88/212 (41.51%), Postives = 129/212 (60.85%), Query Frame = 2
Query: 263 GPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGK-KAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAG--DVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPFTAYLANS-NKVVPCDAGLVKQGDIRRPDLRSAANAL 886
G P+NYDA+ QAI++V++ LK ++A+EVEFPPL SLNK+ DGS K+++ A + F +KL A+ + K K ++VC + G K G R + L ++ G DVVV V P+D+ QW ++++ ++VNGV NGY F+P YYFKPISG G +++QYP F Y A+S NK + + ++QG +RPD R A AL
Sbjct: 69 GVPSNYDALHQQAISSVKSALKKDKRALEVEFPPLTSLNKLGDGSRKSQQQALQGNADFTRKLCTALSQSKNKVWLVCYELGMKDAVGDYGRNNKVQVLTSRDKLDSSQFGSNDVVVAVGPSDESQWLSLARLSKVVPSIVVNGVCNNGYYLFDPCYYFKPISGRGYLIKQYPDNFKVYSASSPNKPLDVEVPFLEQGKFKRPDTRVAFAAL 280
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UD48_HEMAN) HSP 1 Score: 117 bits (293), Expect = 9.570e-27 Identity = 71/208 (34.13%), Postives = 109/208 (52.40%), Query Frame = 2
Query: 263 GPPANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAI-GKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGYVPFEPVYYFKPIS----GWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDIRRPDLRS 871
G P +YD I +QAI A+ GL GG MEVEFPP+ SLNK++DGSA ++R+ R + F K+ A+ G G +++C + + + PP+ DV++V PAD QW + ++ ++ VV +NG NG+ FE YY KP++ G ++R PG +T Y + + D G V+ RPDL++
Sbjct: 1 GVPRSYDEIHAQAIDAIGVGLSGGVTRMEVEFPPIPSLNKLSDGSASSQRMVRNANVDFVLKVAEALSGSGWGVWILCGDSSTREEVVKRSLPPNTQVALLRDGPPPSGPSDVLLVHPPADISQWDYSASLSASSPVVALNGQQHNGHSSFEMAYYLKPMTFNSRTCGYLIRSLPGAWTVYDSQGADM-GVDVGFVQTASGFRPDLQA 207
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XHP6_9RHOD) HSP 1 Score: 93.2 bits (230), Expect = 3.880e-18 Identity = 58/173 (33.53%), Postives = 93/173 (53.76%), Query Frame = 2
Query: 269 PANYDAIASQAIAAVQAGLKGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGVRGAADVRDINAK-NLPPAKAGDVVVVVTPADQGQWKLAKKMAETAT-VVIVNGVFVNGYVPFEPVYYFKPISGWGSVVRQYPGPF 781
P +YD I + AIA+V+ L G+ A E++FP L +LNK+NDGS ++ AR SF KLV ++ + + ++C A + ++ + R + + D+V+VV P+ QW ++ + V++VNG NG+ EPV+Y KP SG G ++R YP F
Sbjct: 37 PKSYDEIHAFAIASVRKALTDGKTACEIDFPLLPALNKLNDGSEQSANQARVACSSFVAKLVQSLPQ--RTQILCFDRPVLAAVQNALKSSERSRLWSPTFDRLELDESDLVIVVMPSGADQWSMSLGLQSRCQGVIVVNGAINNGFDGLEPVFYLKPFSGRGFLLRCYPRDF 207
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BVP8_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.530e-10 Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 2
Query: 296 QAIAAVQAGLKGGEKA----MEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK----GKKAYVVCCQPGAKADFGSGVRGAADVRDINAKN-LPPAKAG--DVVVVVTPADQGQWKLAKKMAETATVVIVNGVFVNGY--VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDI-----RRPDLRSAANALSAAFREQ 907
QAI ++Q+ L +E EFP LA+LNK+ DGS ++ A + ++F KKLV + G K ++ + + + + K+ +P G +V V +TP+ + +++AK +AE++T I+ F VP + YY KP++ G ++R YP +T A + KV+ G G+I PDLR + + ++F E+
Sbjct: 83 QAIQSIQSALANPRDPSLPLVECEFPALAALNKLGDGSLRSTLEAEDANVAFVKKLVTGLAPAPFLGPKITIIVSSSASSSLLNNMKTQVKSATVFSLKDGMPDVSVGKDNVYVCLTPSSRNDFQVAKSLAESSTPAIIVNAFAKDQKSVPEDATMAYYLKPLTYNSQVAGFLIRSYPSNWTVLDAQTKKVL----GSFTDGEILVPKTNTPDLRKSVKLVQSSFDER 306
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKK8_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 1.900e-9 Identity = 72/265 (27.17%), Postives = 118/265 (44.53%), Query Frame = 2
Query: 209 HQRETVRC-FFSFGG-GAKKGPPANYDAIASQAIAAVQAGLKGGEKA----MEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGK-------GKKAYVVCCQPGA---KADFGSGVRGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETAT---VVIVNGVFVNGY-VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPC--DAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
HQ+ +R FSFGG G P+ A AI + + ++ A +E+EFP LA+LNK+ DGS ++ A + LSF KL I G K + + KA +G + + +G + + V+P +G + A+++A + T VVIVN + +P + Y+ KP++ G ++R YP +T A S V+ D ++ QG PDLR++ + + E+ AA
Sbjct: 33 HQQSLIRLGLFSFGGSGENASVPSTTSARDKAAIESCKKAIERPRNADFPLIELEFPVLAALNKLGDGSLRSAMEAEDANLSFVGKLTKGISVPFPLSFGGSKVSIALSSSASNSFKAKAAKITKGTTILSASSPSLAEDVGSGGICIFVSPTSRGDYNSAQQLARSGTAKAVVIVNAFAKDPRSIPGDATMAYFLKPLTYNSQVAGYLIRSYPSNWTVLDATSKAVLGTFSDGEILVQGT-NTPDLRASGRIVQKSVDERAIAA 296
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: DUF1995 (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEC6_THAPS) HSP 1 Score: 68.2 bits (165), Expect = 5.860e-9 Identity = 69/235 (29.36%), Postives = 105/235 (44.68%), Query Frame = 2
Query: 293 SQAIAAVQAGLKG----GEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAIGKGKKAYVVCCQPGAKADFGSGV---RGAADVRDINAKNLPPAKAGDVVVVVTPADQGQWKLAKKMAETA-TVVIVNGVF-----VNGYVPF----EPVYYFKPISGWGSVVRQYPGPFTAYLANSNKVVPCDAGLVKQGDI-----RRPDLRSAANALSAAFREQQGAA*STK 931
+QAI++V+A L + +E EFP LA+LNK+ DGS ++ A + ++FA VG V+ A F V +G A V + +P K ++ V++ P+ Q + +AK +AE VIVNG F V Y +P+ Y I+G+ ++R YP +T A S V+ G +I PDLR A + E+ A S K
Sbjct: 74 NQAISSVKAALTNPRTKSKPLIECEFPALAALNKLGDGSLRSSLEAEDANVAFATPFVGP------KVVLAVSSSASNSFLKKVQKKKGGAVVVSLKDGGVPGVKKDEICVILNPSSQRDYGVAKSLAEGGFKTVIVNGSFKDQKSVPDYATMAYFLKPLTYNSQIAGY--LIRSYPSLWTVLDAQSKAVL----GSFTDEEILVDRTNTPDLRGAVRLAQKSADERAIKARSGK 296
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AX33_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 2.230e-7 Identity = 74/259 (28.57%), Postives = 117/259 (45.17%), Query Frame = 2
Query: 236 FSFGG--GAKKGPPANYDAIASQAIAAVQAGL----KGGEKAMEVEFPPLASLNKINDGSAKNRRLARENTLSFAKKLVGAI-------GKGKKAYVVCCQPG-----AKADFGSGVRGAADVRDINAKNLPPAKAGD-VVVVVTPADQGQWKLAKKMAETAT---VVIVNGVFVNGY-VPFEPV--YYFKPISG----WGSVVRQYPGPFTAYLANSNKVVPC--DAGLVKQGDIRRPDLRSAANALSAAFREQQGAA 919
F+FGG G K P+ +A AI + + + +G +E+EFP LA+LNK+ DGS ++ A + L F KL I G K + +KAD + G A V ++ +L D V V V+P + + A+K+A + + VVIVN + VP + Y+ KP++ G ++R YP +T A S V+ D ++ QG PDLR++ + + E+ AA
Sbjct: 50 FNFGGNSGGKASIPSTTEARDKAAIESCKKAIGRPRQGDCPLIELEFPVLAALNKLGDGSLRSAMEAEDANLVFVGKLAKGISSFSLPFGSSGKVSIALSSSATNSFRSKADKIAKRSGTAAVLSASSPSLAEDVGSDGVCVFVSPTSRVDYTAAQKLARSGSAKAVVIVNAFAKDPRSVPGDATMAYFLKPLTYNSQVAGYLIRSYPSDWTVLDATSKAVLGSFSDKEILVQGT-NTPDLRASGRMVQKSVDERAIAA 307 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig709.15261.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig709.15261.1 >prot_E_fasciculatus_S2_contig709.15261.1 ID=prot_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=293bp MTKGVVLASCILLSCCFEPAAPFLQAGILGARTSHVALGSRQQQPVQHHVback to top mRNA from alignment at E_fasciculatus_S2_contig709:17683..22364- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig709.15261.1 ID=mRNA_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4682bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig709:17683..22364- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig709:17683..22364- >mRNA_E_fasciculatus_S2_contig709.15261.1 ID=mRNA_E_fasciculatus_S2_contig709.15261.1|Name=mRNA_E_fasciculatus_S2_contig709.15261.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=879bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig709:17683..22364- (Ectocarpus fasciculatus EfasUO2)back to top |