mRNA_E_fasciculatus_S2_contig7076.15243.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7076.15243.1
Unique NamemRNA_E_fasciculatus_S2_contig7076.15243.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBY9_ECTSI)

HSP 1 Score: 895 bits (2313), Expect = 0.000e+0
Identity = 480/523 (91.78%), Postives = 486/523 (92.93%), Query Frame = 1
Query:    1 MLPVRTALVVAWTTVFCVGRSEALVRAPLVPPPGGQTTTAGGVAGRTRSNHICHYPQHCAAAAPPGSTWSRRSALTPRLAAPRRGGVASSPAGVSVLVLSMSGGGTDGGPAGAQDKGEASPXXXGGSKDGVEGDGKVKVPWVSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAG--DNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            MLPVRT LVVAW TVF VGRSEALVRA L P     +T AGGV GRT +NHI  YPQHCAA AP  STWSRRSALTP  AAPRRGG+ SS A VS  VLSMSGGGTDGGPAGAQDK  AS    G SK GVEGD KVKVPWVSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTS+ANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEP REFPTAG+PGAG  DNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSV+DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF
Sbjct:    1 MLPVRTTLVVAWATVFWVGRSEALVRAALAP-----STKAGGVGGRTGTNHIFRYPQHCAAVAPSSSTWSRRSALTPGRAAPRRGGLESSSARVS--VLSMSGGGTDGGPAGAQDKRNASSPKEGVSKGGVEGDSKVKVPWVSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSIANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPTREFPTAGEPGAGAGDNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVEDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 516          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: Major (facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI8_9STRA)

HSP 1 Score: 347 bits (890), Expect = 1.200e-110
Identity = 194/412 (47.09%), Postives = 262/412 (63.59%), Query Frame = 1
Query:  379 SKDGVEGDGKVKVPWVSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAG--------DNTAAKS------GDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLS------------------SFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQ 1518
            + +G +G    +V   +WV+L +LL+VYISNQW+R+++ YV NFDV  T   AK++MNV LGF   +YG LAS+ FTLLFS  SL AGRAVD +SRK ATVA+C  WS   A   +A G P V  LRV QG AQAFTTPAAYTM++D FP   R TAN+IYSSG+Y+GG LASL++L+N ++GWRD  L+V  +GVA A ++ LL++E   E  TA   GA          N AA++      G+  GGG G  +    +F E+L  +  S T  LV+ A+A RF AGF + +W APFFRG FP +++++A++NA  V  GG+LS                  +  GG +SD +  +DPR RAWVPMAG +LA+P W+G V   +F +++  L  +Y+ AECWFG TV +LQ
Sbjct:   89 NSEGHDGGAGEQVQAPAWVTLGVLLVVYISNQWSRNVLPYVVNFDVPATTENAKDYMNVALGFGAAEYGALASYGFTLLFSASSLAAGRAVDALSRKGATVAACAAWSLATAAQGLARGLPDVLALRVAQGVAQAFTTPAAYTMLADAFPQRYRATANAIYSSGIYVGGGLASLTVLINSSLGWRDCCLLVGGLGVATAAVAQLLLRE---ESHTAAASGASALNKASTLGNGAAEALLQRGEGETQGGGGG--AAVAPTFAESLRTILSSRTAVLVYAASAARFMAGFAVAIWLAPFFRGAFPDHAAQFAIVNAAAVTIGGVLSCANDANNALPSAPRRAASAVAGGYVSDAFGARDPRFRAWVPMAGSLLAVPMWVGTVNCGDFGLAMTCLFLKYVLAECWFGPTVAVLQ 495          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: MFS (domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GFP1_VITBC)

HSP 1 Score: 304 bits (778), Expect = 3.960e-93
Identity = 175/393 (44.53%), Postives = 233/393 (59.29%), Query Frame = 1
Query:  430 WVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEA------TAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAGDNTAAKSGDKGGGGAGEESEERE--------SFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVFR 1566
            +V LA+L LVY+SNQW+R+L+YY+ +F+ + +E+       A+  +N+ LGFDE QY  +ASF FT+ FS     AG  VD +SR+ AT    L W+AM A  + A  F  +FGLRV QG   AFTTPAAY +++D+FPA+ R TANS Y S VYLG ALASLS+LLN  +GWR    +VAA      +LS LL+ +P        D  AG   A    +   G   EE E RE          +  +G V  S+ V+LV LA+  R  AG  IGVW  P +R  FP + + ++VLNA +V   G  SS LGG ++D+ + +D  +RAW+P  G  LA P W+GV    +F +S   LL EY+AAECWFG TV ILQ   P   RG  QG+F+
Sbjct:  115 FVILAVLTLVYLSNQWSRTLLYYLVDFNDSVSESLGPPTEAARRLINIDLGFDEKQYSFIASFGFTIFFSAAGFFAGGQVDKMSRRVATGLPALGWAAMTALQAGAQSFGQLFGLRVGQGVFMAFTTPAAYALLADIFPANQRATANSFYVSAVYLGQALASLSILLNEQLGWRAVTSIVAAFAATSGILSLLLVTDPR-------DATAGSQMARTIDEDKAGQGREEGERREVGVLGTWVDQRRVVGEVLSSDVVKLVILASVVRIAAGLSIGVWKGPLYRACFPDSMAAFSVLNAGIVGAVGAGSSLLGGALADRLAEKDESIRAWIPAVGSFLAAPLWMGVCLADSFELSAFLLLLEYLAAECWFGPTVAILQSNTPSQYRGTAQGLFQ 500          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: Hypothetical (protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0I3L6_9CRYP)

HSP 1 Score: 299 bits (765), Expect = 3.020e-91
Identity = 166/390 (42.56%), Postives = 239/390 (61.28%), Query Frame = 1
Query:  424 VSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPA---REFPTA-------GDPGAGDNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            ++WV L +LL + + NQWTR++VYY+ +F +  TE   K++MN+ L F E QY +LASF FT L++ CSLIAGRA D  +R    +A+   WS   AG  +A  F  V G R L G +QAFT P AY +I+  FP S   TANS+++S VY+GGA+ASLS+L++  +GWR + L   A+G  +A    L +++P    +E  +A       G P   +   + S D G        + RE+     G+V     V+++F A+A RFCAG+GIGVW AP +R  FP++ SE++V NAFV++ GG+LSS LGGV++D+ +  D   +  +P  G ILA+P WIG     +F  S+A L  EYI AECWFG T+  L + +P +V+G  QG+F
Sbjct:  125 MAWVVLFLLLGINVHNQWTRAMVYYLVSFKIPDTEENEKKYMNIDLNFGEEQYSILASFGFTALYTFCSLIAGRASDKGNRAFIVLAAAAAWSLSTAGQGIARSFEEVLGFRSLMGISQAFTNPPAYGIIASSFPESQIATANSVFASAVYIGGAMASLSILVDQQVGWRMTCLASGALGCLIAAAGTLFLRDPRASRQELGSADERTMLLGGPTEAEEGTSSSLDLG-------RQLRETVTAIKGVVTVP-AVQILFAASAIRFCAGYGIGVWKAPLYREMFPTSESEFSVANAFVISCGGVLSSLLGGVLADRLAPHDYGKKLLIPAVGSILAVPFWIGACKADSFSHSIALLFLEYIVAECWFGPTLAALFKVVPRDVQGTAQGLF 506          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J1Q9_GUITC)

HSP 1 Score: 286 bits (732), Expect = 2.040e-88
Identity = 167/394 (42.39%), Postives = 237/394 (60.15%), Query Frame = 1
Query:  424 VSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAGDNTAAKSGDKGGGGAGEESEERE-------SFQ-------EALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            +SWV L +LL + + NQWTR++VYY+ +F +  TE  A ++MN+ L F+E QY +LASF FT L++ CSLIAGRA D  +R    + +   WS   AG  ++  F  V   R L G +QAFT P AY +I+  FP S   TANS+++S VY+GGALASLS+L +  +GWR + L   A+G  +A   A  +++P  +    G     + T          G+ EE EE E       +FQ       EA+  V    +V+++F A+A RFCAG+GIGVW AP +R  FPS+ SE++V NAFV++ GG+LSS LGGV++D+ +  D   +  +P  G ILA+P WIG     +  +SL FL  EYI AECWFG T+  L + +P  ++G  QG+F
Sbjct:    1 MSWVVLFLLLGINVHNQWTRAMVYYLVSFKIPKTEDNANKYMNIDLNFEEEQYSILASFGFTALYTFCSLIAGRASDKGNRAFIVLVAAAGWSLATAGQGISRSFEQVLAFRSLMGVSQAFTNPPAYGLIASSFPESQIATANSVFASAVYIGGALASLSILADQQVGWRMTCLGSGALGCLLAAGGAFFLRDPRMKREDGGQLN--EQTMLL-------GSREEQEEVEEAASSSFNFQKQMREGLEAIKGVLSIPSVQVLFAASAVRFCAGYGIGVWKAPLYRELFPSSESEFSVANAFVISCGGVLSSLLGGVLADRLAPHDYGKKLLIPAVGSILAVPFWIGACKADS--ISLLFL--EYIVAECWFGPTLAALFKSVPREIQGTAQGLF 381          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1K4_9STRA)

HSP 1 Score: 278 bits (710), Expect = 8.520e-84
Identity = 165/406 (40.64%), Postives = 239/406 (58.87%), Query Frame = 1
Query:  394 EGDGKVKVPWVS----WVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALL---IQEPA-REFPTA--GDPGA-----GDNTAAKSGDKGGGGA-GEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            EGD     P  S    WV L++LLL+Y  NQW RSL+Y +  F+V  +E   + +MNV L FDE  YG+LASF F LL++   L AGRA D+  +K     + ++WS      +  + F  VF  RV+QG+AQA+T+PA   MI+D FP+  R TAN+++++G+Y+G +LAS  + L+ A GWR S ++V  +G+  + ++A +   I  P    F T   G  G      GD    +        A G E E   S  ++L ++F +    L+ L +  R C+ +GI VW  P++R  FP    ++ VLNAFVV GGG+ +S  GGVISD +  ++PR+RAWVP  GC LA+P W+  V+  +FY S+ FLL EY+ AE WFG  +  LQ+ LP NV+G+ QG+F
Sbjct:   30 EGDDNDAPPGYSMSKAWVMLSILLLLYSHNQWVRSLIYCLVKFNVDDSEENKRLYMNVDLEFDEGAYGVLASFGFVLLYTVFCLFAGRASDIWDKKIINFVTSIIWSLAVVFQACVSSFGLVFLGRVMQGAAQAYTSPACIAMIADYFPSKGRATANAVFAAGLYVGFSLASFVIPLDAAQGWRLSTILVGVIGLCSSAVAAWVFWGINPPTITVFKTTVQGRAGVIQEETGDGLLREQQQSAAAPAPGPEDEPVLSTMDSLRVIFSNRAGVLMLLGSCVRICSYYGITVWGPPWWRQNFPLYEMQFGVLNAFVVVGGGVCASLAGGVISDAFVAREPRIRAWVPAFGCFLAVPLWMLAVSVKSFYWSIFFLLLEYLVAESWFGPFIATLQDELPLNVQGMTQGLF 435          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: MFS (domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CCU9_DIALT)

HSP 1 Score: 270 bits (691), Expect = 1.640e-80
Identity = 159/389 (40.87%), Postives = 222/389 (57.07%), Query Frame = 1
Query:  421 WVSWVSLAMLLLVYISNQWTRSLVYYVQNFDVATTEATA----KEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAG----DPGAGDNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            W     L  LL VY+ NQW+RSL++Y+ +F    +  +     +E MNV LGF    YG+LAS  FTL+F+  SL+AG A D + R   T  S L WSA       A     V   R LQG AQA TTPAA+T+I+D+ PA+ RGTANSI++SGVY+GG LA+LS+LL+ A+GWR +    AA+G  +A  +AL + +P    P       +  A   +A+  GD   G     +E+  S       V +   V+L+  + A RFCAGF I VW  P+ RG FP + +++A+  A + A GG  S+  GG +SDK   +D   R W+P+AG + A  CW  ++   +F V++ +LL +Y+ AECWFG  V  LQ  LP  V+G  QG F
Sbjct:  101 WRDAALLPALLGVYVHNQWSRSLLFYLVDFGARESGGSGARATRELMNVELGFGPETYGVLASLPFTLVFAPASLLAGTAADRLDRARLTWVSLLCWSAATLWQGAAQSVGEVAASRALQGLAQAVTTPAAFTLIADVTPAARRGTANSIFASGVYVGGGLAALSILLDEALGWRGTLYAAAALGALLAAGAALTLDDPREREPQGSAARTEAPADAASASVEGDAFRGARTLMAEQIASLGRTAAAVSQRPAVQLLLFSCALRFCAGFSIAVWVGPWGRGAFPEHEADFALAKASISAFGGGFSAIAGGALSDKLGERDAARRLWLPIAGSVGAAVCWSAMLDAQSFDVAMRWLLLQYLCAECWFGAAVATLQAQLPKEVQGGAQGAF 489          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E268_9STRA)

HSP 1 Score: 262 bits (669), Expect = 1.000e-77
Identity = 161/384 (41.93%), Postives = 219/384 (57.03%), Query Frame = 1
Query:  448 LLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLS-ALLIQEPAREFPTAGDPGAG----DNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQDPRV-------RAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            LLLVY+SNQW+RS +YY+ NF  + +  TA+  MNV +GF + QYG LAS +FT LF+  SL AG   D   RK  T  S + WS     T+ A+ +  V   R+  G A AF+TP+AYT+I DL P+     A+SIY SGVYLGGALASLS+LL+ ++GWR +   +AA G+  A LS A+L  +P R      D G      D T   +         E SE+  S       V  ++ VR +F A+ FRFC+G  IGVW AP+FR  FP +S+ YAV+NAF+V+  G+ S  +GG  +DK      R        R  VP+ G +LA+P W   V    F +++ +L  EY+ AECWFG  V +LQ  +   + G  QG+F
Sbjct:   63 LLLVYVSNQWSRSSIYYLVNFSDSAS-VTAQNAMNVDIGFSQAQYGALASVAFTALFAFASLAAGNLADRSDRKLLTAVSAVAWSVATVATASASSYGEVVAARIFMGLACAFSTPSAYTLIRDLVPSDRAALASSIYGSGVYLGGALASLSILLDNSLGWRGALGTIAAYGLVSAGLSYAVLPPDPKRNIVD--DAGQSSKEKDQTTVDN---------ESSEQLSSIITDATDVLSTSRVRWLFAASFFRFCSGLCIGVWAAPYFRLAFPDDSTSYAVVNAFIVSLCGVTSGVVGGWSADKAGAAAVRAGSNENAGRLAVPIVGSLLAVPTWWFAVHSPTFELAMFWLGMEYLVAECWFGPVVAVLQSSVGSGLGGTAQGMF 434          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAF9_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.450e-74
Identity = 158/382 (41.36%), Postives = 219/382 (57.33%), Query Frame = 1
Query:  448 LLLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLS-ALLIQEPAREFPT--AGDPGAGDNTAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSVQ-------DPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            LLLVY+SNQW+RS +YY+ NF  A T  TA   MNV LGF E QYG LAS +FT LF+  SL AG   D   RK  T  +C+ W+     T+ A+ +  V   R+  G A AF TP+AYT+I DL P      A+S+Y SGVYLGGALASLS+LL+ ++GWR +  V+A  G+  A +S A+L  +P        A D  +    A  + D     + EE  +  +F      V  ++ VR +F A+  RFC+G  IGVW AP+FR  FP +S+ YAV+NAF+V+  G+ S  +GG  +D+           +   R  VP+ G +LA+P W   V  ++F  ++ +L  EY+ AECWFG  V +LQ  + P + G  QG+F
Sbjct:  119 LLLVYVSNQWSRSSIYYLVNFSDAPT-VTAANAMNVDLGFSEAQYGALASVAFTALFAFASLAAGNLADKSDRKLLTSVACVSWAVATIITASASSYTEVVAARIFMGLACAFATPSAYTLIRDLIPKERAALASSLYGSGVYLGGALASLSILLDESLGWRGALTVIAVYGLVSAGVSFAVLPPDPKNXXXXXXALDMPSPKKAAIVTND-----SEEEEGKISAFLTDATNVLSTSQVRWLFTASFLRFCSGLCIGVWAAPYFRIAFPDDSTSYAVVNAFIVSLCGVTSGVVGGWTADRTGAAAVGAGYTENTGRLIVPIVGSVLAVPTWWLAVHSSSFESAMFWLGVEYLVAECWFGPVVAVLQSSVGPTLGGTAQGMF 494          
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Match: MFS (domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J6Y3_FISSO)

HSP 1 Score: 251 bits (641), Expect = 1.550e-73
Identity = 164/395 (41.52%), Postives = 217/395 (54.94%), Query Frame = 1
Query:  418 PWVSWVSLAMLLL--VYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASFSFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVFGLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASLSLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAGDNTAAKSGDKGGGGAGEESEERESFQEALGI--VFKSNTVRLVFLATAFRFCAGFGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYS-------VQDPR-VRAWVPMAGCILAIPCW-IGVVTGTNFYVSLAFLLAEYIAAECWFGGTVTILQEGLPPNVRGVGQGVF 1563
            P +SW     L L  +YISNQW+RS +YY+ +F   + +A A   MNV +GF + QYGLLAS +FT LF+  SL AG A D  +RK  TVAS +VWSA   GTS+A+ F  V G RVL G A AF+TP AYT++ D      + TA+SIY +GV L   L+SL+LLL+ ++GWR S  VV   G+    L+  L+ +               N   +   K G  +   + + +  Q    I  V  S   R +FL +  RF +G  IGVW APFFR  F    +EYAV  AF+ AG   +S  LGG  +D  S       VQD   VR WVP+ G ILA P W + V     F  ++A+L  EY+ AECWFG T++ LQ  +   V G  QG+F
Sbjct:   68 PSISWFWKCCLPLWFIYISNQWSRSSLYYLVDF---SADAQALSAMNVDIGFSQVQYGLLASLAFTALFAVASLGAGIAADRFNRKQLTVASAVVWSAATIGTSLADSFELVLGWRVLMGLACAFSTPTAYTLLRDRVTRDRQATASSIYGTGVALASGLSSLTLLLDESVGWRSSLDVVGGFGIFATALTVFLLDDDTER-----------NQEKQLRSKEGSSSLNTNSDDQFSQIGSDIASVLSSERARWIFLGSFLRFSSGLCIGVWAAPFFRMEFSDFQTEYAVAQAFISAGIASMSGILGGATADWLSSRASDQEVQDNGGVRMWVPVIGSILAAPAWFLAVQPDIPFESAMAWLAVEYLVAECWFGPTISTLQAAVGSTVGGTAQGMF 448          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7076.15243.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MFS0.000e+091.78domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Major1.200e-11047.09facilitator superfamily domain-containing protein ... [more]
MFS3.960e-9344.53domain-containing protein n=3 Tax=Vitrella brassic... [more]
Hypothetical3.020e-9142.56protein n=2 Tax=Hanusia phi TaxID=3032 RepID=A0A7S... [more]
MFS2.040e-8842.39domain-containing protein n=1 Tax=Guillardia theta... [more]
Hypothetical8.520e-8440.64protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
MFS1.640e-8040.87domain-containing protein n=2 Tax=Diacronema luthe... [more]
Hypothetical1.000e-7741.93protein n=1 Tax=Helicotheca tamesis TaxID=374047 R... [more]
Hypothetical1.450e-7441.36protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
MFS1.550e-7341.52domain-containing protein n=1 Tax=Fistulifera sola... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7076contigE_fasciculatus_S2_contig7076:86..6104 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score901.4
Seed ortholog evalue2e-259
Seed eggNOG ortholog2880.D8LBY9
Model size1569
Hectar predicted targeting categorysignal peptide
Exons8
EggNOG free text desc.sphingolipid transporter activity
EggNOG OGsCOG0477@1,KOG1330@2759
Ec32 ortholog descriptionMajor facilitator superfamily
Ec32 orthologEc-20_003810.1
Cds size1569
COG Functional cat.EGP
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7076.15243.1prot_E_fasciculatus_S2_contig7076.15243.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7076 86..6104 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842368.1940448-CDS-E_fasciculatus_S2_contig7076:85..3011696842368.1940448-CDS-E_fasciculatus_S2_contig7076:85..301Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 86..301 -
1696842368.208956-CDS-E_fasciculatus_S2_contig7076:887..10761696842368.208956-CDS-E_fasciculatus_S2_contig7076:887..1076Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 888..1076 -
1696842368.21853-CDS-E_fasciculatus_S2_contig7076:1505..17531696842368.21853-CDS-E_fasciculatus_S2_contig7076:1505..1753Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 1506..1753 -
1696842368.2280197-CDS-E_fasciculatus_S2_contig7076:2326..24531696842368.2280197-CDS-E_fasciculatus_S2_contig7076:2326..2453Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 2327..2453 -
1696842368.2377348-CDS-E_fasciculatus_S2_contig7076:3885..40911696842368.2377348-CDS-E_fasciculatus_S2_contig7076:3885..4091Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 3886..4091 -
1696842368.2475066-CDS-E_fasciculatus_S2_contig7076:4711..47981696842368.2475066-CDS-E_fasciculatus_S2_contig7076:4711..4798Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 4712..4798 -
1696842368.2573683-CDS-E_fasciculatus_S2_contig7076:5284..57011696842368.2573683-CDS-E_fasciculatus_S2_contig7076:5284..5701Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 5285..5701 -
1696842368.2672505-CDS-E_fasciculatus_S2_contig7076:6025..61041696842368.2672505-CDS-E_fasciculatus_S2_contig7076:6025..6104Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7076 6026..6104 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7076.15243.1

>prot_E_fasciculatus_S2_contig7076.15243.1 ID=prot_E_fasciculatus_S2_contig7076.15243.1|Name=mRNA_E_fasciculatus_S2_contig7076.15243.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=523bp
MLPVRTALVVAWTTVFCVGRSEALVRAPLVPPPGGQTTTAGGVAGRTRSN
HICHYPQHCAAAAPPGSTWSRRSALTPRLAAPRRGGVASSPAGVSVLVLS
MSGGGTDGGPAGAQDKGEASPQQEGGSKDGVEGDGKVKVPWVSWVSLAML
LLVYISNQWTRSLVYYVQNFDVATTEATAKEFMNVGLGFDETQYGLLASF
SFTLLFSTCSLIAGRAVDVVSRKTATVASCLVWSAMAAGTSVANGFPTVF
GLRVLQGSAQAFTTPAAYTMISDLFPASVRGTANSIYSSGVYLGGALASL
SLLLNGAIGWRDSHLVVAAVGVAVAVLSALLIQEPAREFPTAGDPGAGDN
TAAKSGDKGGGGAGEESEERESFQEALGIVFKSNTVRLVFLATAFRFCAG
FGIGVWCAPFFRGRFPSNSSEYAVLNAFVVAGGGLLSSFLGGVISDKYSV
QDPRVRAWVPMAGCILAIPCWIGVVTGTNFYVSLAFLLAEYIAAECWFGG
TVTILQEGLPPNVRGVGQGVFR*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7076:86..6104-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7076.15243.1 ID=mRNA_E_fasciculatus_S2_contig7076.15243.1|Name=mRNA_E_fasciculatus_S2_contig7076.15243.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6019bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7076:86..6104- (Ectocarpus fasciculatus EfasUO2)
ATGCTGCCCGTGCGCACGGCCTTGGTCGTAGCCTGGACTACGGTTTTCTG TGTCGGTCGATCGGAGGCTCTTGTACGCGGTGAGGAGCATTGCCTATTGA CAGCAACAGAGCAGCAGCAGAGAAAGATTGAAAGATAGAGAGGGAGAGAG CTTCCTACAGCAGAGTGTACAAAGCGCGCGGTTCACTGGGTTTGAGAATG GAACGCTGACAGTCCCGCGAATGACTAAGAACTGCTTACGCGCACGAATA GGCTGTTTTTGTAGATATCTATCTCCCGCTCTATTTCCCTCTGTCTCTCA GAGCGGCACGTGGATCTCAGAGCGTCCACGTGCCGCTATCTCTATCCTAT ACCCTCTGGTCTGACTTTGACAACCGCATCCCCACCCTCTGCCCCCGAAA CAGCGCCCTTGGTTCCCCCTCCCGGCGGGCAAACAACCACGGCTGGCGGT GTCGCCGGGCGCACGCGCAGCAACCACATTTGTCACTATCCGCAACATTG CGCAGCAGCAGCCCCTCCCGGCAGCACCTGGAGCCGCAGAAGCGCGTTGA CACCCCGCCTGGCGGCTCCCCGAAGAGGAGGGGTGGCGTCGTCTCCCGCC GGTGTGAGTGTATTGGTATTGAGCATGTCTGGCGGAGGCACCGACGGGGG GCCGGCTGGGGCGCAAGATAAGGGGGAGGCCTCGCCACAGCAGGAAGGGG GATCAAAGGACGGGGTGGAGGGCGACGGCAAGGTTAAGGTGCCCTGGGTG TCCTGGGTGTCCCTGGCGATGCTGCTACTGGTCTACATCAGCAATCAGTG GACTAGGAGCCTTGTTTACTGTGAGCGCCAGGCTGGGCTAAGTTGAATGG GTTCTGGTGTAGAACACCTGCAGTTGGACCTTGTCTCCAACTATTTCTGT AGACTGCATTCGGCACCGTCCCCCTATCTTTTTTCCCCTAGGGTGTCTCA CTTGGGTGGCGCTTCTTGCCACTGCTACGCCAATGGTGCGAAGGGTCGCC GTCTTTAATGCTGACACGAATCTCGTAGGCAATTATCGTTGGTCTTCCCC TTGTCTATTGTCCATGGCTGGATCTCCACACTGCTTGTCGTCACATTCTG ACAGACGCGTCGACGTGGCGAGCCGGCAGCGACCGAAGCCACCCTCTTTT ATTTCTGACCCCAGTTGCCCTCCGTCTTTCGTCGCGTTGCTTGCTCTGCT GATACTCGCCATTGTGGCTGTGACTGTGGCTGTGGCTCTGTGACCGCTGT GGCTAACGCTGTGGCTGTTCCTGCGGTGGTGATCGGTGCGGGTGTCAACG AATCAGACGTGCAGAACTTCGATGTGGCGACGACCGAAGCCACGGCCAAG GAGTTCATGAACGTCGGCCTCGGGTTTGACGAGACTCAGTACGGTGAGCA GGCCTTCCACTCTTTCGCAGGGAGTCCCTTGGAATGCATGCACAGCAAGC AGCATCCCTCACTTGATGGAAACGACGGCAATCCAAGAGGCTGCAGGGGG ATCGTCAAGCCCCCTTGCACCCTATTTAGGTGGCACGCTTATATTCTCTC TTGAACATCCACGGATGATACACAAGTACTACATGGTCGGGCCTGGACTT TTTCAAGGCGGTGGCACGATACGGCTCGGCTCACACATACGCGAGCGGCC GAGAGAGCTGCGCTAGCATCTCGGACCTTCCAAATCCGCTTCACGTATCC GTGGCCAACGGACACAACGGGCACCCAAAATAAACGAGCGGTCTGTTCGC TCGTGTGGTCGTTTTTTTATTGCGTCTGTCTGATTTGTGTGGTATCCCTT AACCCTAGCCCTAATGATGCGGGCCCGAGGGCGGCGTGAACAGGCGGCAT TGATCCTTCAGATCCGGGAGGCGTCATTGCTTGACGCTGCCCTTCGGCAC CCCGCACCATGCACAGCAGTGACGTCAACGACATGCCTTGCGTGCCCTCG ACTTCCATTGTCGCACGACGCCGCTCTCGTATGATCGACACAACTACAAC AATGCGGCCACAGGGTTGCTGGCGTCCTTCAGCTTCACTCTGCTCTTCAG CACCTGCAGCCTCATCGCCGGCCGCGCCGTAGACGTCGTCAGCCGCAAGA CTGCTACCGTGGCGTCGTGCCTCGTCTGGTCCGCCATGGCCGCGGGCACC TCTGTCGCCAACGGCTTCCCCACCGTCTTCGGCCTCAGGGTTCTGCAAGG TTCTGCCCAGGCGTTCACGGTGAGCTCTTGGGCCGGCTTCGTGCCCACGG ACAACATTCTCGCATTGCAAGTGAAGCAACCACTGGTGGATGGACACATT TTGTGCACGGTTTCGTGGGAAGAAGCCGATGTTGCCGGGTAGCATCGGGC AGTCTTGGTGCATGCGGTATGCGTTCTTTGAAGTGTGCTCGGGCGGGCAC CAATGTTTGTCGGACGCGTTTTCATGCAACCGCATGATTGGTTGATGGTT GGTAGTAAATGTTTGTGTTCCATTGTGTTGCGCGTTCAACTCCTTGCGGA AACCTTGGTGCTCGGCCGGTACGCTCGACCGCCACATCCGTATACCCTCG TGTGCTCGTCTCGTACGCCACCGCTGCTGCTGCTGATTGCCATCTATCTC TCCCGAAGCACGAACGTTTACGATATGACCAGCAAGCTGTGCGGAATTGT GGCACATACTTTTCTCACTGGTCGAAGAAAAACGTCATGCATGCCCGGAT CGGATAATTTTTTTTGTTTGTTTGTCCGCTAGTCACTGTACACATGCATA ATACCCAAGAAGCGGCATTTTCTGTCACTATGTTCCAAACACACCTGGTT CATCGATCAACCACCTACCAAATTTCAGGCTCAAAATACCCAGAGTTCTG TCTGCCCCGACGTTGAAAAGTCAACTAGTCCGAACTTTGGTGCGGGAACG ATGTCAGAACCCCCGCGGGGTCTACCACGCTCCACCCACCCACGCGTGAG CCGCTCAGTTTTCAGACGACCTACTCACCCACACTACGGTGAGCGGGTGT TATTTATGCGTGTGTGACGCGACTCGCGGACTAAACACAAAGAGAGATTC ACCTTACAACGACATCCGAGAATGCATGACGTTTTGTTTCGGCCAGTGGG AAAACTACATGCCACTTTGTCCGTATTTGTTGCTGGGGTTGGAATCTGTC TGCCTTCTAACATAGTTTCTTCATTTTACACTCGGAGTACTTTTTTTTAC AATTCCAGGTAGAAAAATCACTCCGCCCTCTCCCGAATCCATTGTTCATC AGCCAACCGGAAAAGAACTGCGCGCCACTGGGCATTTTTCGACCAGCTGT CCCACTTGTAGTTGACCATCACAGAACACAAATCTCTGCGAAGGATTTCC ACCCGAAAGCCTCCACATGACTACCGACCGCGGTCTCCCAATCAAAACCC CGCCAACGACGTCATCCGGGTCCAAAAGTCCTTCCTCCGGACGATTTTGG ATGAGACATTACACGTCATCCAAAGATTTGTCGGTCGGCAGGTGTGTTTT CTTTTCTGCTGGAGTCTTTTTTTTACCTATCAGATTGAGCTGCGTGCCAC GGCAGCTGCTTGCTCCCTCCTTGCGATCGCCTTTCCCTCACGCCTCTTGT GCGTTGCTCCTCCCCCCTTTCACACTCGCCAACAAATCGTGCTATTTCAA GACTCCGGCGGCCTACACGATGATCAGCGATCTGTTCCCGGCGTCGGTTC GAGGGACAGCGAACTCCATCTACTCATCCGGGGTGTACTTGGGGGGAGCG TTGGCAAGCTTGTCTTTGCTGCTCAACGGTAAGTTCACGGCGAGCGGGTC AATTCAGTCTGGGTCCGCAGTACCCTCTTCGGTCCGCAGTACCCTCTTCG GTCCGCAGTACCCTCTTCGGTCCGCAGTACCCTCTTCGGTCCGCAGTACC CTCTTCGTACTGGCGGCGTTCGATCCGGTTACACTAGCCGCCGTCCATGC ATTTTCACGATGAAACTCTCACACCTCCTTCATCGCAAGCAATCCATCCC TTGACCGACCCACCGATCTGAGTATCCACTCCCACAACCAGCATTTGGAC ACTAAGTAGTCAAACCCGCGCTTTCCTGCCATGTTGTTGCCGTTGTCTGA ACATTACGCACTGTTTGACCTGTATCCATTGTGTCTCTTGTTCCCTACTC TTGGAGGCAGTCTCTTGTTCCCTACTCTTCGAGGCAGTCTCTTGTTCCCT ACTCTTCGAGGCACAGACGTAAATTTCCGTGGCCACAAGCTAGCCTTAAT AAGGTACAAAGTATCATCTATTCATGGGCGTGAAGCGTGAAGCTTGATCG GTGATATAGCCCCCCCCCCTGCGCCCGCACGTACAAAATAAACGCGACAA GGCGCGATCGGGTGGCGCGATAGCCACCTCGTGGTAGCGGCCGTAGGCGT GGCCGTCGCCGTCCTGTCGGCCCTCCTCATCCAGGAGCCGGCGAGGGAGT TCCCCACTGCCGGTGATCCCGGCGCGGGGGACAACACCGCCGCAAAGAGT GGCGACAAGGGTGGTGGCGGTGCGGGAGAGGAGTCGGAAGAGAGGGAATC GTTTCAGGAGGCCCTGGGTATCGTTTTCAAGTCCAACACGGTCAGGCTGG TGCGTTAAGTGCGTTGTACACGCTGATTGCATCCGACACCCATCTCCGAC TGTCTCTTTGCTGTTATTTGTTGGAGCTGATCCGACTTCTGTGTATGATG TTGGACCAACAACGTCAGCTTTTTTTTTTTAGCGCTCTGGCCGCTCTTGT ACCGAGACGATGTAGCTGTTTTGGTGCTGGCGTAACGATTTCCGCGCGCT GTCCGCGGACTATTGTCTTGCGGAGCGTGGTATCACCTGCTCCGATTGGC GCGTGCACACGTTTTCAGCCATATGCCGCGGCGAACGAAACCGGCGCACT TAAAAGAAGAAAAAGGCGTAGCCATCGACTAGTCAGACAACTGACTGAGT AGTCAATGGTTACGCCTTTACCTAGTAAGACAATAAACGATGACAACCCC AACTCCCCGCCTTGCCCTTCCTCCTCAGGTGTTCCTGGCAACGGCCTTCC GGTTCTGCGCTGGGTTCGGCATCGGGGTGTGGTGTGCCCCCTTCTTCCGA GGGCGTTTCCCGTCCAACTCTTCGGAGTACGCCGTCCTCAACGCGTTCGT GGTGGCGGGCGGAGGCCTCCTCTCGTCGTTCCTAGGGGGGGTTATTTCGG ACAAGTACTCTGTGCAGGTGAGTTCTCAGCCCAGTCCTTCCTATTAATAA TAGGTTTGGTCTGTTGCGATTCTTGGCGTCGATCAGCGATAAGCGAACCC TGCTTGCTGACTTTTTGTTGCCTCGACTGGTGGCAATCGGCCTTGCTTGG CGGTGGTCGGCGGCAGGTTCGAGTCGTATCTAGGAGGCCTTTTTTCTCGA CTATTTGGTGCCTCGATTCAGGCGCAGTAGTTCAGAACATTATGTTGTTG AATGTATTACGGTCCTTATAGCAAAGATGACCACCATATTAGTATGCAAC GACCATTTCCCCCGCCGACGCTTCTCCTAGTGTGGACTCCGTTTCTTAGG TGTTTGAAGTTTCCTGTGACAATATCACATCAAGGTGCTGCCATGGTGAC CACCGGGCCGGGCCCCGATGGCACCTGCCACCCCCACACCCCCCCCCCCC CCCCCAAAAAAAAAAGAAAAAAAAAATGGCGTATCTACCCCCCCCCTCCC AAGAAAAAAATGGCGAAGGTAGTTGCCGTTGTAGCTGGAACCCCGTTTCT CCCCTAAAACCTACCGTCAACTCCCGACTGCACGCCTCTCTCCCGTCCGG AAGGACCCGCGGGTGCGCGCGTGGGTGCCGATGGCAGGGTGTATCCTCGC CATTCCGTGCTGGATCGGGGTGGTCACGGGGACCAACTTCTACGTTTCGC TGGCCTTCCTGCTGGCGGAGTACATCGCGGCGGAATGTTGGTTCGGCGGC ACGGTGACGATACTGCAGGAGGGTCTTCCGCCGAACGTGCGAGGCGTTGG CCAAGGGGTGTTCAGGTGA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7076:86..6104-

>mRNA_E_fasciculatus_S2_contig7076.15243.1 ID=mRNA_E_fasciculatus_S2_contig7076.15243.1|Name=mRNA_E_fasciculatus_S2_contig7076.15243.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1569bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7076:86..6104- (Ectocarpus fasciculatus EfasUO2)
ATGCTGCCCGTGCGCACGGCCTTGGTCGTAGCCTGGACTACGGTTTTCTG
TGTCGGTCGATCGGAGGCTCTTGTACGCGCGCCCTTGGTTCCCCCTCCCG
GCGGGCAAACAACCACGGCTGGCGGTGTCGCCGGGCGCACGCGCAGCAAC
CACATTTGTCACTATCCGCAACATTGCGCAGCAGCAGCCCCTCCCGGCAG
CACCTGGAGCCGCAGAAGCGCGTTGACACCCCGCCTGGCGGCTCCCCGAA
GAGGAGGGGTGGCGTCGTCTCCCGCCGGTGTGAGTGTATTGGTATTGAGC
ATGTCTGGCGGAGGCACCGACGGGGGGCCGGCTGGGGCGCAAGATAAGGG
GGAGGCCTCGCCACAGCAGGAAGGGGGATCAAAGGACGGGGTGGAGGGCG
ACGGCAAGGTTAAGGTGCCCTGGGTGTCCTGGGTGTCCCTGGCGATGCTG
CTACTGGTCTACATCAGCAATCAGTGGACTAGGAGCCTTGTTTACTACGT
GCAGAACTTCGATGTGGCGACGACCGAAGCCACGGCCAAGGAGTTCATGA
ACGTCGGCCTCGGGTTTGACGAGACTCAGTACGGGTTGCTGGCGTCCTTC
AGCTTCACTCTGCTCTTCAGCACCTGCAGCCTCATCGCCGGCCGCGCCGT
AGACGTCGTCAGCCGCAAGACTGCTACCGTGGCGTCGTGCCTCGTCTGGT
CCGCCATGGCCGCGGGCACCTCTGTCGCCAACGGCTTCCCCACCGTCTTC
GGCCTCAGGGTTCTGCAAGGTTCTGCCCAGGCGTTCACGACTCCGGCGGC
CTACACGATGATCAGCGATCTGTTCCCGGCGTCGGTTCGAGGGACAGCGA
ACTCCATCTACTCATCCGGGGTGTACTTGGGGGGAGCGTTGGCAAGCTTG
TCTTTGCTGCTCAACGGCGCGATCGGGTGGCGCGATAGCCACCTCGTGGT
AGCGGCCGTAGGCGTGGCCGTCGCCGTCCTGTCGGCCCTCCTCATCCAGG
AGCCGGCGAGGGAGTTCCCCACTGCCGGTGATCCCGGCGCGGGGGACAAC
ACCGCCGCAAAGAGTGGCGACAAGGGTGGTGGCGGTGCGGGAGAGGAGTC
GGAAGAGAGGGAATCGTTTCAGGAGGCCCTGGGTATCGTTTTCAAGTCCA
ACACGGTCAGGCTGGTGTTCCTGGCAACGGCCTTCCGGTTCTGCGCTGGG
TTCGGCATCGGGGTGTGGTGTGCCCCCTTCTTCCGAGGGCGTTTCCCGTC
CAACTCTTCGGAGTACGCCGTCCTCAACGCGTTCGTGGTGGCGGGCGGAG
GCCTCCTCTCGTCGTTCCTAGGGGGGGTTATTTCGGACAAGTACTCTGTG
CAGGACCCGCGGGTGCGCGCGTGGGTGCCGATGGCAGGGTGTATCCTCGC
CATTCCGTGCTGGATCGGGGTGGTCACGGGGACCAACTTCTACGTTTCGC
TGGCCTTCCTGCTGGCGGAGTACATCGCGGCGGAATGTTGGTTCGGCGGC
ACGGTGACGATACTGCAGGAGGGTCTTCCGCCGAACGTGCGAGGCGTTGG
CCAAGGGGTGTTCAGGTGA
back to top