mRNA_E_fasciculatus_S2_contig7075.15242.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGT8_9PHAE) HSP 1 Score: 449 bits (1154), Expect = 7.470e-154 Identity = 231/267 (86.52%), Postives = 246/267 (92.13%), Query Frame = 1
Query: 1 YIDDLFHISRELMVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVLRNSAAKAQKTRRSGTSSQQRKITSSEEAAQQMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSEAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEPSDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRNTANSMPVSRRERRLFFLPC 801
YIDDLFHISRELMVIIVLGLIQSVFVKLFIE++LTGEIRNFINPPNMQLLTISVLFGLS+IDPVRRLKFSPMAQSSAPM RAVLR+SA+K QK RR QQRKIT SEEAAQ MWTYDKIA+++ MAEAFR FANRALCQESVWFLEEVSRYQNEDYTIASPLGGGK EAF+AIAKRFVEDGAPDEVNLSY DK+NIIAMLN+EARG EPSDEELSG+FDRA++ IRYMIESNIVHKFL TDEFR ANS+P SRRERRLF LPC
Sbjct: 158 YIDDLFHISRELMVIIVLGLIQSVFVKLFIEEELTGEIRNFINPPNMQLLTISVLFGLSVIDPVRRLKFSPMAQSSAPMTRAVLRSSASKTQKPRRGXXXXQQRKITPSEEAAQHMWTYDKIALDNAMAEAFRVFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKIEAFEAIAKRFVEDGAPDEVNLSYTDKKNIIAMLNKEARGFEPSDEELSGIFDRAYSHIRYMIESNIVHKFLETDEFRKAANSVPPSRRERRLFLLPC 424
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1D4_ECTSI) HSP 1 Score: 116 bits (291), Expect = 3.600e-27 Identity = 70/170 (41.18%), Postives = 108/170 (63.53%), Query Frame = 1
Query: 247 VLRNSAAKAQKTRRSGTSSQ-QRKITSSEEAAQQM---WTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSEAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGL-EPSDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFR 741
V NS ++ + + RS TSSQ + +++ +E A + W+YD + +AEAFR FA+RALCQES+ FLE V++Y++ DY+IA P+ + AF AI KRFV DGA DE+N+ DK I+ + + E +D V ++A+ EIR M+E+N++++FL T+ FR
Sbjct: 30 VRANSGSETELSVRSNTSSQDESRLSDCDETASTVRTKWSYDTMTTVPEVAEAFRGFAHRALCQESIMFLEAVTQYESGDYSIAKPIAS-QFAAFNAIVKRFVADGALDEINIGGTDKERILKIFQCGSTAFFEMNDAGRRLVLNKAYIEIRDMLETNLLYRFLHTEAFR 198
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIU5_9PHAE) HSP 1 Score: 110 bits (275), Expect = 1.060e-25 Identity = 57/121 (47.11%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 382 MAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSEAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGL-EPSDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFR 741
+AEAFR FA+RALCQES+ FLEEV++Y++ DY+IA P+ + AF AI KRFV DGA DE+N+ DK I+ + + E ++ V ++A+ EIR M+E+N++H+FL T+ FR
Sbjct: 7 VAEAFRGFAHRALCQESIMFLEEVTKYESGDYSIAKPIAS-QFAAFNAIVKRFVVDGALDEINIGGTDKERILKIFQSGSTAFFEMNEAGRRLVLNKAYIEIRDMLETNLLHRFLHTEAFR 126
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI) HSP 1 Score: 110 bits (275), Expect = 5.580e-23 Identity = 86/273 (31.50%), Postives = 138/273 (50.55%), Query Frame = 1
Query: 4 IDDLFHISRELMVIIV-LGLIQSVFVKLFIEKDLTG------EIRNFINPPNMQLLTISVLFGLSIIDPVRRLKFSPMAQSSAPMARAVLRN-------------SAAKAQKTRRSGTSSQQRKITSSEEAAQQMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKS-----EAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEP-SDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRN 744
+DDLF IS EL+++ +GLI V +++ G E R N N+ +L + VLFG+SI+ P+RRL P A + A VL + + + Q R + + S + +W +++I +A AF ++ RALC ES FL EVSRYQN DY G S F I F++ G+P+EVN+S K+++ I+A+ ++ E +D E +F RA+ ++ M+E+N++ +FL TD F++
Sbjct: 222 VDDLFSISTELIIVTATIGLITIV-------QEIDGLWGGCYERRWLAN--NLSVLFMIVLFGVSIVAPLRRLASDPFAATRRNYANRVLPDHTEPHSIGGNRLDAVRRGQSERGDDRGRDGGRRSRSHKQDIDLWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTIRASSGSSFPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNDAERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKS 485
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI) HSP 1 Score: 103 bits (257), Expect = 1.930e-20 Identity = 51/138 (36.96%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 343 QMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSEAFKA---IAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEP-SDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRN 744
++W ++++ +A AF ++ RALC ESV FL EVSRYQN+DY + G F I F++ GAP+EVN+S KD++ I+ + + E ++EE VF R++ E++ M+E+N++ +FL TD+F++
Sbjct: 459 EVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAGTCPTQFGTFCYITDTFIKAGAPEEVNISDKDRKLILELYQKGEESFEEVNEEERRMVFKRSYLEVKSMLEANLLRRFLNTDQFKS 596
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 1.640e-18 Identity = 50/139 (35.97%), Postives = 85/139 (61.15%), Query Frame = 1
Query: 346 MWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKS-----EAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEP-SDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRN 744
+W +++I +A AF ++ +ALC ES FL EVSRYQN DY +A+ G S F I F++ G+P+EVN+S K+++ I+A+ ++ E ++EE +F RA+ ++ M+E+N++ +FL TD F++
Sbjct: 450 IWDFERIVRTPLLAVAFEDYSKKALCHESFLFLSEVSRYQNGDYAMATRASSGSSCPTQFGTFCYITDTFIKAGSPEEVNISDKERKLILALYHKGEELFEDVNEEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKS 588
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI) HSP 1 Score: 91.7 bits (226), Expect = 6.370e-17 Identity = 49/139 (35.25%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 346 MWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKS-----EAFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEPSD-EELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRN 744
+W +++I +A AF ++ RALC ES FL EVSRYQN DY G S F I F++ G+ +EVN+S K+++ I+A+ ++ E + EE +F RA+ ++ M+E+N++ +FL TD F++
Sbjct: 208 LWDFERIVRTPLLAVAFEDYSKRALCHESFLFLSEVSRYQNGDYATTKRASSGSSFPTQFGTFCYITDTFIKAGSHEEVNISDKERKLILALYHKGEELFEDVNVEERRMIFRRAYLAVKRMLEANLLLRFLNTDRFKS 346
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTV9_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.480e-16 Identity = 51/164 (31.10%), Postives = 80/164 (48.78%), Query Frame = 1
Query: 343 QMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSE-----AFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEPSDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRNTANSMPVSRRERRLFFLPC*PPPRQ 819
++W +++IA +A AF ++ RALC ESV FL EVSRYQN +Y + + S +F I F++ G+P+EVN+ +F RAH +++ M+E+N+V +FL TD F+N V R + PPP++
Sbjct: 2 EVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSPEEVNIRM--------------------------IFSRAHRDVKNMLEANLVLRFLNTDRFKNVR----VQRENMKAMMGS--PPPQE 133
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE) HSP 1 Score: 91.3 bits (225), Expect = 2.210e-16 Identity = 47/139 (33.81%), Postives = 81/139 (58.27%), Query Frame = 1
Query: 343 QMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSEA----FKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEP-SDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRN 744
++W ++++ +A AF ++ RALC ESV FL EVSRYQN+DY + G F I F++ GAP+EVN+ ++ I+ + + E ++EE VF R++ ++ M+E+N++ +FL TD+F++
Sbjct: 388 EVWDFERLGRTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNDDYATPTNAAAGTCPTQFGTFCFITDTFIKAGAPEEVNI----RKLILELYQKGEESFEEVNEEERRMVFKRSYLAVKSMLEANLLRRFLNTDQFKS 522
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Match: RGS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW1_ECTSI) HSP 1 Score: 80.1 bits (196), Expect = 9.200e-13 Identity = 49/164 (29.88%), Postives = 79/164 (48.17%), Query Frame = 1
Query: 343 QMWTYDKIAVNSPMAEAFRAFANRALCQESVWFLEEVSRYQNEDYTIASPLGGGKSE-----AFKAIAKRFVEDGAPDEVNLSYKDKRNIIAMLNREARGLEPSDEELSGVFDRAHTEIRYMIESNIVHKFLTTDEFRNTANSMPVSRRERRLFFLPC*PPPRQ 819
++W +++IA +A AF ++ RALC ESV FL EVSRYQN +Y + + S +F I F++ G+ +EVN+ +F RA+ +++ M+E+N+V +FL TD F+N V R + PPP++
Sbjct: 338 EVWDFERIASTPLLAAAFEDYSKRALCHESVLFLSEVSRYQNNNYPMPTRASSASSPRIQFGSFCYITDTFIKAGSSEEVNIRM--------------------------IFSRAYRDVKNMLEANLVLRFLNTDRFKNVR----VQRENMKAMMGS--PPPQE 469 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7075.15242.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7075.15242.1 >prot_E_fasciculatus_S2_contig7075.15242.1 ID=prot_E_fasciculatus_S2_contig7075.15242.1|Name=mRNA_E_fasciculatus_S2_contig7075.15242.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=256bp MVIIVLGLIQSVFVKLFIEKDLTGEIRNFINPPNMQLLTISVLFGLSIIDback to top mRNA from alignment at E_fasciculatus_S2_contig7075:3939..7762- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7075.15242.1 ID=mRNA_E_fasciculatus_S2_contig7075.15242.1|Name=mRNA_E_fasciculatus_S2_contig7075.15242.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3824bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7075:3939..7762- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7075:3939..7762- >mRNA_E_fasciculatus_S2_contig7075.15242.1 ID=mRNA_E_fasciculatus_S2_contig7075.15242.1|Name=mRNA_E_fasciculatus_S2_contig7075.15242.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=768bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7075:3939..7762- (Ectocarpus fasciculatus EfasUO2)back to top |