mRNA_E_fasciculatus_S2_contig7066.15231.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7066.15231.1
Unique NamemRNA_E_fasciculatus_S2_contig7066.15231.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE)

HSP 1 Score: 543 bits (1399), Expect = 4.390e-186
Identity = 302/421 (71.73%), Postives = 333/421 (79.10%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGP-NTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASAAVTPTFFSGPGG-----VPASLLFSSSSSDVEGRFGYADDDGGEDA 1245
            MV GITCSSGGK+ T T DP PV   N    IEEWGTV EC QGPA ++VIGNSKPSIILTE +TGD++VIVEETSSEPSFLYSVW ATG     AAG+SSVE+ + FHI+STVRLAEAVVT IVNGVA +GGG ACFGLLRAYN GP +T  FS  YG++KA PFGE PV H I SLKD E II G+EMNTN MVAFA+V+GLS +G+ALTLF CPKYEMD+YNRDELLRA NLQA GLPDDPSRHSAMRIEVQRED+SR+LT+T+SES SER G  RFLLRRGPE TD P+PAT N P+G DG P PR P  M LGGV+T L    PR RNRAI+P   APAMVLTASPVPSNAGSR+VSPTHPTAEGSSAS A TPTF S PG        ASLLF S SSD +G+ GYADDD  EDA
Sbjct:  210 MVDGITCSSGGKAQTFTDDPIPVTL-NRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGG-ACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEVTDDPVPATDNTPNGRDGVPFPRGPAHMYLGGVLTRLCKTIPRSRNRAINPEPLAPAMVLTASPVPSNAGSRMVSPTHPTAEGSSASTAATPTFLSEPGRGSSRFPDASLLFRSLSSD-DGKTGYADDDEEEDA 627          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI)

HSP 1 Score: 529 bits (1363), Expect = 9.020e-182
Identity = 292/414 (70.53%), Postives = 318/414 (76.81%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGP-NTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASAAVTPTFFSGPGG-----VPASLLFSSSSSDVEGRFGYAD 1224
            MV GITCSSGG++   T DP PV  +N    IE WGTV EC QGPA IDVIG+SKPSIILTE +TGD++VIVEETSSEPSFLYSVW ATG     AAG+SSVE+ + FHI+STVRLAEAVVT IVNGVA EGGG ACFGLLRAYN GP +T  FSDSYG++KA+PFGE PV H I SLKD+E II G+EMNTN MVAFA+V+GLS  G+ LTLF CPKYEMDVYNRDELLRAINLQA GLPDDPSRHSAMRIEVQRE                     RFLLRRGPE TD P+PAT +AP+G DG P+PRRP  M LGGV+TWL    PRPRN AI+P   APAMVLTASPVPSNAGSRVVSPTHPTAEGSSASA  TPTF S PG        ASLLF SSSSDVEG  GYAD
Sbjct:  210 MVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGG-ACFGLLRAYNRGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQAQGLPDDPSRHSAMRIEVQREXXXXXXXXXXXXXXXXXXRCARFLLRRGPEVTDDPVPATDSAPNGRDGVPVPRRPAHMYLGGVLTWLGKPIPRPRNHAINPEPLAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASATATPTFLSEPGRGASRFPDASLLFRSSSSDVEGITGYAD 622          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI)

HSP 1 Score: 247 bits (630), Expect = 4.010e-71
Identity = 168/363 (46.28%), Postives = 202/363 (55.65%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPT 1089
            MV GITCSS G     T D T V RRN    IEEWGTV EC +GP   +  G SKPSIILT +  GD++VIVEETS  PSFLYSVW ATGD SI AAGDSSVE+ + FHIASTVRLAEAVVTGIVNGVA  GGGGACFGLLRAY+ G +T  F + YG EKA PFGE P    + SL + E I  G+ MN NAMVAF  ++ LS +G  +T F   K +MD+Y+R    +A +   +     P   +  R         R     + ++H    GR      R  +                 G   P R + +S       L  AFP P N  I+P   A ++ L+ SPVP   G    SPT
Sbjct:  213 MVDGITCSSNG-----TRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGD-SITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAG-GGGGACFGLLRAYSKGSDTPEFEE-YGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDRHYEHQARS--TLHARKTPQGRATPRDLPPGAGVPRRPLQALRDAHLRPEGRGEQARERRYQR----------------GRRQPERLLGLSHEKRARGLGRAFPGPMNNFIYPESVASSVTLSGSPVPLPLGPTTASPT 549          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 2.690e-60
Identity = 154/341 (45.16%), Postives = 195/341 (57.18%), Query Frame = 1
Query:   91 DIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNT--AIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMP---ATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHP----AGPAPAMVLTASPVPSNAGSRVVSP 1086
            D   WG+   C +GP   +   +S+P IIL E   G+  VIVEE  + PSFLYSVW A   D        S E+ + FHI+STVRLAEAVVTGIVNG   E GGG CFGLLR +N G +    I +     E+A PFGE P    + SL+D E I  G+ MNTNA+VAF  ++ LS +G+  ++      EMDVY+RDELLRAI+ QA G  +DPS  S MRI VQ+E +   L V +S S  ++ G  RFLLRR P  T  P+P   A  +A     GAPLP     M +G V   +  A+P   N   +P    A P P+   T  PVPS+AGS V +P
Sbjct:  228 DEAAWGSFLWCGEGPLAENKT-SSQPVIIL-EKSEGEVSVIVEEVGTHPSFLYSVWTAGSAD--------SKELAYSFHISSTVRLAEAVVTGIVNG---ETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKE-RGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLPLGRPRMFIGSVRFGMGRAYPGRNNNFRYPVALSASPVPSASTT--PVPSHAGSLVGTP 552          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 8.420e-52
Identity = 145/364 (39.84%), Postives = 196/364 (53.85%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDP---TPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEE--KALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDD-PSRHSAMRIEVQREDQSRNLTVTVSES-HSERRGRVRFLLRRGPEATDGPMPATGNAPSGPD---GAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSN 1062
            +V  + CSS       +SDP    PV R+      EEWG V EC  GP   +    ++P+IILT+N T +++VI+EET++  SFLYSVWK  GD         SV +T+ FHIASTVRLAEAVVTGIV G   E  GG CFG+LRA++ GP      D Y +   KALPFGE P    +  L D E I  GI++N  AM     V+ L+ +G+   ++      MD+Y+RDEL+RA++LQ  G   D  ++HS MRI V+RED    ++V +S++  +E  G  RF   +    T  P P         D   GA  P     + LGGV       FP       +PA    A+ L+ASP P++
Sbjct:  235 VVEAVNCSS-------SSDPLKDAPVYRKMN-NKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGD---------SVTLTYAFHIASTVRLAEAVVTGIVLG---ESSGGGCFGMLRAFSRGPEPP--EDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNG-GISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AVSLSASPTPTS 571          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 1.540e-48
Identity = 141/365 (38.63%), Postives = 196/365 (53.70%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEE-KALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNR-----DELLRAINLQAMGLPDDPS-RHSAMRIEVQREDQSRNLTVTVSES-HSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDG---APLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSN 1062
            +V  + CSS G+         PV R+      EEWG V EC  GP   +    ++P+IILT++ T +++VI+EET++  SFLYSVWK  G+         SV +++ FHIASTVRLAEAVVTGIV G   E  GG CFG+LRA++ GPN     D YGE  KALPFGE P    +  L D E I  GI++N  AM     V+ L+ +G+   ++      MD+Y+R     DEL+RA++LQ      DP+  HS +RI V+RED   +++V +S++  +E  G  RF   +    T  P P         DG   A +P     + LGGV       FP       +PA    A+ L+ SP P++
Sbjct:  236 VVEAVDCSSSGR-----LKDAPVYRKIN-NKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGE---------SVNLSYAFHIASTVRLAEAVVTGIVLG---ESTGGGCFGMLRAFSRGPNPP--EDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHSKIRIFVRREDNG-SISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AISLSVSPTPTS 575          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 1.390e-43
Identity = 119/292 (40.75%), Postives = 171/292 (58.56%), Query Frame = 1
Query:  103 WGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHS-ERRGRVRFLLRRGPEATDGP--MPATGNAPSGPD-----GAPLPRRPVLMSLGG 954
            WG   +C +GP R   +  S P+++LT   +G   VIVEE+SS P+FLYSVW A G D        SVE+ + FH+ STVRL EAV+TGIV+G  +   GGACFGLLR ++       + D  G ++A PFGE P    +  ++D E I  G+E+N NA+V    V+  +++ +   +       MDVY+RDELLRA++LQ     D  + H A+RI V+RED S ++TV +++SH  E+R   RFL RR  +  +G   +PA G+A +        GA +P +  + SLGG
Sbjct:  236 WGNALDCERGP-RPTGLTTSPPAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTAEGSD--------SVELAYLFHVHSTVRLVEAVITGIVHGETE---GGACFGLLRVFSE--TRVEYED--GLDRASPFGEIPTGDTV-LVQDLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRRED-SGHITVFINDSHDKEQRAWERFLRRRTSKVVEGDDRLPAGGDADAALSDDKFGGATVPVKNTV-SLGG 508          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT7_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 7.640e-40
Identity = 96/206 (46.60%), Postives = 105/206 (50.97%), Query Frame = 1
Query:  484 ALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTA 1101
            A PFGE PV H IPSL+D E II G+EMNT+ MVAFA+V+GLS +G+ALTLF CPKYEMD+YNRDELLRAINLQA GLPDDPSRHSAM I+                                                     PL                                  PAMVLTASPV SN GSRVVSPTHPTA
Sbjct:    2 ATPFGEDPVSHRIPSLRDKEHIIVGVEMNTSGMVAFALVMGLSFIGIALTLFLCPKYEMDIYNRDELLRAINLQAQGLPDDPSRHSAMHIQ-----------------------------------------------------PL---------------------------------TPAMVLTASPVASNPGSRVVSPTHPTA 121          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.020e-21
Identity = 73/211 (34.60%), Postives = 110/211 (52.13%), Query Frame = 1
Query:   85 AGDIEEWGTVRECAQGPARIDVIGNSK--PSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGI---EMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINL 702
            A +  +WG V EC  GP+ ++   N +  P +IL  +  G++Y+IVEE SS PSFLYSVW   G+           ++ H F+++ST RL EA+V+G          GG C  +L  ++     A +S + G  +  PFGE P    +  L   E I+ G+   +M T   V   VV G +  G    L +  +  +DVY+RD+L+RAI+L
Sbjct:  217 AEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW-VPGE-----VKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXX---GGGCLDMLTKFS--VQNATYSLN-GALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGC---LCFHSRKALDVYDRDQLIRAISL 412          
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT8_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 2.160e-16
Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 1
Query:    1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSII 177
            MV GITCSSGGK   +T+D  PV  +N   DIEEWGTV EC QGPARIDVIG SKPSII
Sbjct:  149 MVEGITCSSGGKGANLTNDFVPVTLKNATDDIEEWGTVLECDQGPARIDVIGKSKPSII 207          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Uncharacterized4.390e-18671.73protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.020e-18270.53protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.010e-7146.28protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.690e-6045.16protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized8.420e-5239.84protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.540e-4838.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.390e-4340.75protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1... [more]
Uncharacterized7.640e-4046.60protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.020e-2134.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.160e-1671.19protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7066contigE_fasciculatus_S2_contig7066:6013..7510 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size1248
Hectar predicted targeting categoryother localisation
Exons2
Cds size1248
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842366.8481543-CDS-E_fasciculatus_S2_contig7066:6012..65861696842366.8481543-CDS-E_fasciculatus_S2_contig7066:6012..6586Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7066 6013..6586 -
1696842366.8610137-CDS-E_fasciculatus_S2_contig7066:6836..75101696842366.8610137-CDS-E_fasciculatus_S2_contig7066:6836..7510Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7066 6837..7510 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7066.15231.1prot_E_fasciculatus_S2_contig7066.15231.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7066 6013..7510 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7066.15231.1

>prot_E_fasciculatus_S2_contig7066.15231.1 ID=prot_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=416bp
MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDV
IGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDS
SVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNT
AIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVV
VGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMR
IEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPS
GPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASP
VPSNAGSRVVSPTHPTAEGSSASAAVTPTFFSGPGGVPASLLFSSSSSDV
EGRFGYADDDGGEDA*
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mRNA from alignment at E_fasciculatus_S2_contig7066:6013..7510-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7066.15231.1 ID=mRNA_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1498bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7066:6013..7510- (Ectocarpus fasciculatus EfasUO2)
ATGGTAGCCGGCATCACGTGCTCGTCGGGAGGCAAGTCGGTCACCATCAC CAGTGATCCCACTCCAGTTAACCGCAGGAACGAAGCTGGCGACATCGAAG AATGGGGCACCGTTCGGGAGTGTGCCCAAGGGCCTGCGCGTATCGACGTG ATCGGCAACAGTAAACCCTCGATCATTCTCACCGAGAACAAGACGGGAGA CTCATACGTGATCGTAGAGGAGACCAGCAGCGAACCCAGCTTCCTCTATT CCGTGTGGAAGGCAACCGGGGACGACTCCATCGACGCTGCCGGCGACTCC TCCGTCGAAATGACCCACAAGTTCCACATCGCATCCACCGTACGGCTTGC CGAGGCGGTGGTCACCGGGATCGTGAACGGCGTGGCCGACGAGGGCGGCG GCGGCGCTTGTTTCGGCCTCCTCCGAGCGTACAATAACGGCCCTAATACC GCGATTTTTTCTGATTCCTATGGCGAAGAAAAGGCGTTGCCGTTCGGCGA GACCCCCGTGCCCCACATAATCCCTTCCTTGAAGGACCATGAGCAAATCA TCTTCGGGATCGAGATGAACACCAATGCGATGGTGGCCTTCGCTGTGGTG GTAGGCCTGAGCTCCATGGGCTTGGCGCTGACCCTCTTCTGGTGTCCGAA ATACGAGATGGACGTCTACAACAGGTATGTTTCCTAGCGAGATGATACAC CGTCGGTAGCAGGATGGTTGCGATTTCGCAGGCGTGGTCTGCTCTCCGAG TGCCTTGCATCAGGTCTTCGTGCACATATCCTAGGTCTGAGACGTTTCGT GCAAGGTGCGTTCAAGGAAATAGTACCACGCCCCCGTTCGTTACACTATT CTTCTCTTGCCTGTACCAGACACAACAGATCAAAGAGCCACCATCCACCG TTTGCCCGCCCACACACCGCGCAGGGACGAGCTGCTCCGCGCGATCAACC TGCAGGCGATGGGCTTACCCGATGATCCGTCAAGGCACTCGGCGATGCGC ATCGAGGTCCAGAGGGAAGATCAAAGCAGAAACTTGACCGTCACTGTCAG CGAGTCCCACAGCGAACGGAGAGGCCGCGTGCGCTTCCTTCTAAGGCGAG GGCCCGAGGCGACCGATGGCCCCATGCCGGCCACGGGTAATGCTCCCAGC GGACCCGACGGGGCCCCCTTGCCGAGGCGCCCGGTCCTTATGTCCCTTGG TGGTGTTATGACGTGGTTGAACAACGCCTTTCCCCGCCCAAGGAACCGCG CCATCCATCCAGCGGGTCCAGCCCCAGCCATGGTCCTGACCGCATCGCCG GTGCCGTCCAACGCCGGGTCTAGGGTGGTATCCCCGACGCACCCAACCGC CGAAGGATCATCTGCGTCTGCGGCCGTGACACCGACGTTTTTTTCTGGGC CCGGAGGCGTCCCCGCGTCTCTCCTCTTCTCCAGCTCGAGCTCGGACGTC GAAGGGAGATTCGGCTACGCCGATGATGATGGTGGCGAGGATGCCTAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7066:6013..7510-

>mRNA_E_fasciculatus_S2_contig7066.15231.1 ID=mRNA_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1248bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7066:6013..7510- (Ectocarpus fasciculatus EfasUO2)
ATGGTAGCCGGCATCACGTGCTCGTCGGGAGGCAAGTCGGTCACCATCAC
CAGTGATCCCACTCCAGTTAACCGCAGGAACGAAGCTGGCGACATCGAAG
AATGGGGCACCGTTCGGGAGTGTGCCCAAGGGCCTGCGCGTATCGACGTG
ATCGGCAACAGTAAACCCTCGATCATTCTCACCGAGAACAAGACGGGAGA
CTCATACGTGATCGTAGAGGAGACCAGCAGCGAACCCAGCTTCCTCTATT
CCGTGTGGAAGGCAACCGGGGACGACTCCATCGACGCTGCCGGCGACTCC
TCCGTCGAAATGACCCACAAGTTCCACATCGCATCCACCGTACGGCTTGC
CGAGGCGGTGGTCACCGGGATCGTGAACGGCGTGGCCGACGAGGGCGGCG
GCGGCGCTTGTTTCGGCCTCCTCCGAGCGTACAATAACGGCCCTAATACC
GCGATTTTTTCTGATTCCTATGGCGAAGAAAAGGCGTTGCCGTTCGGCGA
GACCCCCGTGCCCCACATAATCCCTTCCTTGAAGGACCATGAGCAAATCA
TCTTCGGGATCGAGATGAACACCAATGCGATGGTGGCCTTCGCTGTGGTG
GTAGGCCTGAGCTCCATGGGCTTGGCGCTGACCCTCTTCTGGTGTCCGAA
ATACGAGATGGACGTCTACAACAGGGACGAGCTGCTCCGCGCGATCAACC
TGCAGGCGATGGGCTTACCCGATGATCCGTCAAGGCACTCGGCGATGCGC
ATCGAGGTCCAGAGGGAAGATCAAAGCAGAAACTTGACCGTCACTGTCAG
CGAGTCCCACAGCGAACGGAGAGGCCGCGTGCGCTTCCTTCTAAGGCGAG
GGCCCGAGGCGACCGATGGCCCCATGCCGGCCACGGGTAATGCTCCCAGC
GGACCCGACGGGGCCCCCTTGCCGAGGCGCCCGGTCCTTATGTCCCTTGG
TGGTGTTATGACGTGGTTGAACAACGCCTTTCCCCGCCCAAGGAACCGCG
CCATCCATCCAGCGGGTCCAGCCCCAGCCATGGTCCTGACCGCATCGCCG
GTGCCGTCCAACGCCGGGTCTAGGGTGGTATCCCCGACGCACCCAACCGC
CGAAGGATCATCTGCGTCTGCGGCCGTGACACCGACGTTTTTTTCTGGGC
CCGGAGGCGTCCCCGCGTCTCTCCTCTTCTCCAGCTCGAGCTCGGACGTC
GAAGGGAGATTCGGCTACGCCGATGATGATGGTGGCGAGGATGCCTAA
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