mRNA_E_fasciculatus_S2_contig7066.15231.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMP8_9PHAE) HSP 1 Score: 543 bits (1399), Expect = 4.390e-186 Identity = 302/421 (71.73%), Postives = 333/421 (79.10%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGP-NTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASAAVTPTFFSGPGG-----VPASLLFSSSSSDVEGRFGYADDDGGEDA 1245
MV GITCSSGGK+ T T DP PV N IEEWGTV EC QGPA ++VIGNSKPSIILTE +TGD++VIVEETSSEPSFLYSVW ATG AAG+SSVE+ + FHI+STVRLAEAVVT IVNGVA +GGG ACFGLLRAYN GP +T FS YG++KA PFGE PV H I SLKD E II G+EMNTN MVAFA+V+GLS +G+ALTLF CPKYEMD+YNRDELLRA NLQA GLPDDPSRHSAMRIEVQRED+SR+LT+T+SES SER G RFLLRRGPE TD P+PAT N P+G DG P PR P M LGGV+T L PR RNRAI+P APAMVLTASPVPSNAGSR+VSPTHPTAEGSSAS A TPTF S PG ASLLF S SSD +G+ GYADDD EDA
Sbjct: 210 MVDGITCSSGGKAQTFTDDPIPVTL-NRTNGIEEWGTVLECDQGPAVVEVIGNSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGDGGG-ACFGLLRAYNRGPYDTRDFSALYGKQKARPFGEDPVSHYIYSLKDIENIIIGVEMNTNGMVAFALVIGLSFIGIALTLFLCPKYEMDIYNRDELLRATNLQAQGLPDDPSRHSAMRIEVQREDRSRHLTITISESDSERSGCARFLLRRGPEVTDDPVPATDNTPNGRDGVPFPRGPAHMYLGGVLTRLCKTIPRSRNRAINPEPLAPAMVLTASPVPSNAGSRMVSPTHPTAEGSSASTAATPTFLSEPGRGSSRFPDASLLFRSLSSD-DGKTGYADDDEEEDA 627
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT9_ECTSI) HSP 1 Score: 529 bits (1363), Expect = 9.020e-182 Identity = 292/414 (70.53%), Postives = 318/414 (76.81%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGP-NTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASAAVTPTFFSGPGG-----VPASLLFSSSSSDVEGRFGYAD 1224
MV GITCSSGG++ T DP PV +N IE WGTV EC QGPA IDVIG+SKPSIILTE +TGD++VIVEETSSEPSFLYSVW ATG AAG+SSVE+ + FHI+STVRLAEAVVT IVNGVA EGGG ACFGLLRAYN GP +T FSDSYG++KA+PFGE PV H I SLKD+E II G+EMNTN MVAFA+V+GLS G+ LTLF CPKYEMDVYNRDELLRAINLQA GLPDDPSRHSAMRIEVQRE RFLLRRGPE TD P+PAT +AP+G DG P+PRRP M LGGV+TWL PRPRN AI+P APAMVLTASPVPSNAGSRVVSPTHPTAEGSSASA TPTF S PG ASLLF SSSSDVEG GYAD
Sbjct: 210 MVDGITCSSGGEADIFTDDPIPVTLKNGTDAIEVWGTVLECDQGPAGIDVIGSSKPSIILTERETGDTHVIVEETSSEPSFLYSVWNATGASITAAAGNSSVEIAYAFHISSTVRLAEAVVTAIVNGVAGEGGG-ACFGLLRAYNRGPYDTVDFSDSYGKQKAMPFGEDPVSHYINSLKDNEHIIVGVEMNTNGMVAFALVIGLSFTGIVLTLFLCPKYEMDVYNRDELLRAINLQAQGLPDDPSRHSAMRIEVQREXXXXXXXXXXXXXXXXXXRCARFLLRRGPEVTDDPVPATDSAPNGRDGVPVPRRPAHMYLGGVLTWLGKPIPRPRNHAINPEPLAPAMVLTASPVPSNAGSRVVSPTHPTAEGSSASATATPTFLSEPGRGASRFPDASLLFRSSSSDVEGITGYAD 622
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRU0_ECTSI) HSP 1 Score: 247 bits (630), Expect = 4.010e-71 Identity = 168/363 (46.28%), Postives = 202/363 (55.65%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPT 1089
MV GITCSS G T D T V RRN IEEWGTV EC +GP + G SKPSIILT + GD++VIVEETS PSFLYSVW ATGD SI AAGDSSVE+ + FHIASTVRLAEAVVTGIVNGVA GGGGACFGLLRAY+ G +T F + YG EKA PFGE P + SL + E I G+ MN NAMVAF ++ LS +G +T F K +MD+Y+R +A + + P + R R + ++H GR R + G P R + +S L AFP P N I+P A ++ L+ SPVP G SPT
Sbjct: 213 MVDGITCSSNG-----TRDDTTVTRRNATDHIEEWGTVLECDRGPGITNGTGKSKPSIILTAHDGGDTHVIVEETSKHPSFLYSVWNATGD-SITAAGDSSVEIAYAFHIASTVRLAEAVVTGIVNGVAG-GGGGACFGLLRAYSKGSDTPEFEE-YGTEKATPFGEDPENGAVDSLNEVEIINTGVMMNANAMVAFVWLLVLSFIGFGMTFFLRSKIDMDIYDRHYEHQARS--TLHARKTPQGRATPRDLPPGAGVPRRPLQALRDAHLRPEGRGEQARERRYQR----------------GRRQPERLLGLSHEKRARGLGRAFPGPMNNFIYPESVASSVTLSGSPVPLPLGPTTASPT 549
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC87_ECTSI) HSP 1 Score: 219 bits (558), Expect = 2.690e-60 Identity = 154/341 (45.16%), Postives = 195/341 (57.18%), Query Frame = 1
Query: 91 DIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNT--AIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMP---ATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHP----AGPAPAMVLTASPVPSNAGSRVVSP 1086
D WG+ C +GP + +S+P IIL E G+ VIVEE + PSFLYSVW A D S E+ + FHI+STVRLAEAVVTGIVNG E GGG CFGLLR +N G + I + E+A PFGE P + SL+D E I G+ MNTNA+VAF ++ LS +G+ ++ EMDVY+RDELLRAI+ QA G +DPS S MRI VQ+E + L V +S S ++ G RFLLRR P T P+P A +A GAPLP M +G V + A+P N +P A P P+ T PVPS+AGS V +P
Sbjct: 228 DEAAWGSFLWCGEGPLAENKT-SSQPVIIL-EKSEGEVSVIVEEVGTHPSFLYSVWTAGSAD--------SKELAYSFHISSTVRLAEAVVTGIVNG---ETGGGPCFGLLRTFNAGRDMEEGISTGEEERERAKPFGEKPEDDKVDSLQDVETIEVGVLMNTNALVAFVCLLVLSLVGIGWSMCLESSVEMDVYDRDELLRAISQQAQGEDNDPSTRSDMRIYVQKE-RGGELNVVISASDDDQNGCARFLLRREPTPTVHPIPVADAVSHALDDHGGAPLPLGRPRMFIGSVRFGMGRAYPGRNNNFRYPVALSASPVPSASTT--PVPSHAGSLVGTP 552
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT6_ECTSI) HSP 1 Score: 194 bits (492), Expect = 8.420e-52 Identity = 145/364 (39.84%), Postives = 196/364 (53.85%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDP---TPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEE--KALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDD-PSRHSAMRIEVQREDQSRNLTVTVSES-HSERRGRVRFLLRRGPEATDGPMPATGNAPSGPD---GAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSN 1062
+V + CSS +SDP PV R+ EEWG V EC GP + ++P+IILT+N T +++VI+EET++ SFLYSVWK GD SV +T+ FHIASTVRLAEAVVTGIV G E GG CFG+LRA++ GP D Y + KALPFGE P + L D E I GI++N AM V+ L+ +G+ ++ MD+Y+RDEL+RA++LQ G D ++HS MRI V+RED ++V +S++ +E G RF + T P P D GA P + LGGV FP +PA A+ L+ASP P++
Sbjct: 235 VVEAVNCSS-------SSDPLKDAPVYRKMN-NKSEEWGRVVECEAGPRLANGGEQAQPAIILTQNGTNETHVIIEETTTFLSFLYSVWKTNGD---------SVTLTYAFHIASTVRLAEAVVTGIVLG---ESSGGGCFGMLRAFSRGPEPP--EDEYAKMMVKALPFGENPQSGKVEKLTDVETIEAGIDINVAAMTCLVCVLSLTVVGIVWAVYLGRSTGMDIYDRDELIRAVSLQGHGRAVDLAAQHSRMRIFVRREDNG-GISVAISDTGQAEPGGCWRFWPCKKVGETADPSPVADTVIQNNDDFGGASAPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AVSLSASPTPTS 571
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JST2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.540e-48 Identity = 141/365 (38.63%), Postives = 196/365 (53.70%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEE-KALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNR-----DELLRAINLQAMGLPDDPS-RHSAMRIEVQREDQSRNLTVTVSES-HSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDG---APLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSN 1062
+V + CSS G+ PV R+ EEWG V EC GP + ++P+IILT++ T +++VI+EET++ SFLYSVWK G+ SV +++ FHIASTVRLAEAVVTGIV G E GG CFG+LRA++ GPN D YGE KALPFGE P + L D E I GI++N AM V+ L+ +G+ ++ MD+Y+R DEL+RA++LQ DP+ HS +RI V+RED +++V +S++ +E G RF + T P P DG A +P + LGGV FP +PA A+ L+ SP P++
Sbjct: 236 VVEAVDCSSSGR-----LKDAPVYRKIN-NKSEEWGRVVECEVGPRLPNGSEQAQPAIILTQHGTNETHVIIEETTTFLSFLYSVWKTNGE---------SVNLSYAFHIASTVRLAEAVVTGIVLG---ESTGGGCFGMLRAFSRGPNPP--EDEYGEMIKALPFGENPQSGKVQKLTDVETIEAGIDINVAAMSCLVCVLSLTVVGVVWAVYLGRSTGMDIYDRWGTAWDELIRAVSLQGQRRELDPAAEHSKIRIFVRREDNG-SISVAISDTGQAEPGGCWRFWPCKKVAETADPSPVADTVIQNNDGFGGASVPAGSRTVWLGGVRIGRARPFPGRDGTFTYPA----AISLSVSPTPTS 575
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRU1_ECTSI) HSP 1 Score: 169 bits (429), Expect = 1.390e-43 Identity = 119/292 (40.75%), Postives = 171/292 (58.56%), Query Frame = 1
Query: 103 WGTVRECAQGPARIDVIGNSKPSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHS-ERRGRVRFLLRRGPEATDGP--MPATGNAPSGPD-----GAPLPRRPVLMSLGG 954
WG +C +GP R + S P+++LT +G VIVEE+SS P+FLYSVW A G D SVE+ + FH+ STVRL EAV+TGIV+G + GGACFGLLR ++ + D G ++A PFGE P + ++D E I G+E+N NA+V V+ +++ + + MDVY+RDELLRA++LQ D + H A+RI V+RED S ++TV +++SH E+R RFL RR + +G +PA G+A + GA +P + + SLGG
Sbjct: 236 WGNALDCERGP-RPTGLTTSPPAVVLTNGDSGLVSVIVEESSSYPTFLYSVWTAEGSD--------SVELAYLFHVHSTVRLVEAVITGIVHGETE---GGACFGLLRVFSE--TRVEYED--GLDRASPFGEIPTGDTV-LVQDLETIEAGVEINMNALVCLLWVMASTAVCVVWLICLRNSIGMDVYDRDELLRAVSLQGHASRDPAAEHPAIRIFVRRED-SGHITVFINDSHDKEQRAWERFLRRRTSKVVEGDDRLPAGGDADAALSDDKFGGATVPVKNTV-SLGG 508
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT7_ECTSI) HSP 1 Score: 147 bits (372), Expect = 7.640e-40 Identity = 96/206 (46.60%), Postives = 105/206 (50.97%), Query Frame = 1
Query: 484 ALPFGETPVPHIIPSLKDHEQIIFGIEMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINLQAMGLPDDPSRHSAMRIEVQREDQSRNLTVTVSESHSERRGRVRFLLRRGPEATDGPMPATGNAPSGPDGAPLPRRPVLMSLGGVMTWLNNAFPRPRNRAIHPAGPAPAMVLTASPVPSNAGSRVVSPTHPTA 1101
A PFGE PV H IPSL+D E II G+EMNT+ MVAFA+V+GLS +G+ALTLF CPKYEMD+YNRDELLRAINLQA GLPDDPSRHSAM I+ PL PAMVLTASPV SN GSRVVSPTHPTA
Sbjct: 2 ATPFGEDPVSHRIPSLRDKEHIIVGVEMNTSGMVAFALVMGLSFIGIALTLFLCPKYEMDIYNRDELLRAINLQAQGLPDDPSRHSAMHIQ-----------------------------------------------------PL---------------------------------TPAMVLTASPVASNPGSRVVSPTHPTA 121
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPI8_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.020e-21 Identity = 73/211 (34.60%), Postives = 110/211 (52.13%), Query Frame = 1
Query: 85 AGDIEEWGTVRECAQGPARIDVIGNSK--PSIILTENKTGDSYVIVEETSSEPSFLYSVWKATGDDSIDAAGDSSVEMTHKFHIASTVRLAEAVVTGIVNGVADEGGGGACFGLLRAYNNGPNTAIFSDSYGEEKALPFGETPVPHIIPSLKDHEQIIFGI---EMNTNAMVAFAVVVGLSSMGLALTLFWCPKYEMDVYNRDELLRAINL 702
A + +WG V EC GP+ ++ N + P +IL + G++Y+IVEE SS PSFLYSVW G+ ++ H F+++ST RL EA+V+G GG C +L ++ A +S + G + PFGE P + L E I+ G+ +M T V VV G + G L + + +DVY+RD+L+RAI+L
Sbjct: 217 AEESSKWGDVSECESGPSLVNASANDRASPPVILLNSTEGEAYLIVEEESSYPSFLYSVW-VPGE-----VKPQEAQLNHAFYVSSTTRLVEAIVSGXXXXXXX---GGGCLDMLTKFS--VQNATYSLN-GALRVSPFGEHPSSSSVERLDQVEPIVVGVLVSDMGTVCGVMLMVVTGAAFAGC---LCFHSRKALDVYDRDQLIRAISL 412
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT8_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.160e-16 Identity = 42/59 (71.19%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 1 MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVIGNSKPSII 177
MV GITCSSGGK +T+D PV +N DIEEWGTV EC QGPARIDVIG SKPSII
Sbjct: 149 MVEGITCSSGGKGANLTNDFVPVTLKNATDDIEEWGTVLECDQGPARIDVIGKSKPSII 207 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7066.15231.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7066.15231.1 >prot_E_fasciculatus_S2_contig7066.15231.1 ID=prot_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=416bp MVAGITCSSGGKSVTITSDPTPVNRRNEAGDIEEWGTVRECAQGPARIDVback to top mRNA from alignment at E_fasciculatus_S2_contig7066:6013..7510- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7066.15231.1 ID=mRNA_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1498bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7066:6013..7510- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7066:6013..7510- >mRNA_E_fasciculatus_S2_contig7066.15231.1 ID=mRNA_E_fasciculatus_S2_contig7066.15231.1|Name=mRNA_E_fasciculatus_S2_contig7066.15231.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1248bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7066:6013..7510- (Ectocarpus fasciculatus EfasUO2)back to top |