mRNA_E_fasciculatus_S2_contig7058.15221.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 123 bits (308), Expect = 9.960e-31 Identity = 52/74 (70.27%), Postives = 58/74 (78.38%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNEDDGEACRNSFACIDPNAPCVDDDSVAPKLRLGC 224
M++NC YPG +GNG CD NN ELCAYDGGDCCECTCE EDD ACRN+FAC+DPNAPCVDDDSV + C
Sbjct: 278 MIDNCEYPGGIGNGWCDVDNNNELCAYDGGDCCECTCESLEDDDWACRNNFACVDPNAPCVDDDSVTIDMLENC 351
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 119 bits (299), Expect = 8.160e-30 Identity = 53/77 (68.83%), Postives = 61/77 (79.22%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNEDDGEACRNSFACIDPNAPCVDDDSVAPKLRLGCRNW 233
M++NC YPG +G+G CDE NN ELCAYDGGDCCECTCEG+EDD CRN FAC+DPNAPCVDDDSV + C +W
Sbjct: 53 MIDNCDYPGGIGDGWCDEDNNNELCAYDGGDCCECTCEGSEDDDWHCRN-FACVDPNAPCVDDDSVTIDMIENC-SW 127
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 100 bits (250), Expect = 8.100e-24 Identity = 48/81 (59.26%), Postives = 53/81 (65.43%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEG-NEDDG------EACRNSFACIDPNAPCVDDDSVAPKLRLGC 224
MVENC Y G VGNG CDE NN E C YDGGDCCECTC+ + DDG C N FACIDPNAPCV+DD + + C
Sbjct: 120 MVENCGYVGSVGNGWCDEENNNEGCGYDGGDCCECTCQPLDTDDGTDDYFQNGCGNGFACIDPNAPCVNDDDITLDIVENC 200
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 102 bits (254), Expect = 1.920e-23 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNEDDGEACRNSFACIDPNAPCVDDDSVAPKLRLGCR----------NWRRVLQ 248
M+ENC YP VG+G+C++ NN ELCAYDGGDCC CTC+ + DD AC +FACIDP A CV+DD + + + C WRR+L+
Sbjct: 285 MIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACT-TFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGWLRWRRLLR 375
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 91.7 bits (226), Expect = 1.240e-19 Identity = 43/83 (51.81%), Postives = 50/83 (60.24%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNEDDGE---------ACRNSFACIDPNAPCVDDDSVAPKLRLGC 224
MVE C + VG+G CDE NN ELC YDGGDCCECTCE D + C + FACIDPNAPCV+DD + + C
Sbjct: 139 MVEECGWVRGVGDGWCDEDNNNELCGYDGGDCCECTCEAPPADDDWDWDDDWYGPCGSGFACIDPNAPCVNDDDITVDVDESC 221
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R2_9PHAE) HSP 1 Score: 89.7 bits (221), Expect = 2.270e-19 Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNE----DDGEACRNS----FACIDPNAPCVDDDSVAPKLRLGC 224
M+ENC R+GNG CD N E CAYDGGDCCECTC+ + D GE C+ FACIDP+APCVDDD V ++ C
Sbjct: 45 MMENCYDASRIGNGACDSLLNNEECAYDGGDCCECTCDPSRYPWYDSGEGCQTGMYGGFACIDPDAPCVDDDIVTVEMMDLC 126
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEP6_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 2.320e-19 Identity = 44/82 (53.66%), Postives = 52/82 (63.41%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNE----DDGEACRNS----FACIDPNAPCVDDDSVAPKLRLGC 224
M+ENC P R+GNG CD N E CAYDGGDCCECTC+ + D G C+ FACIDP+APCVDDD V ++ C
Sbjct: 156 MMENCYDPSRIGNGACDSLLNNEDCAYDGGDCCECTCDPSRYPWYDSGVGCQTGMYGGFACIDPDAPCVDDDIVTAEMMDLC 237
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.830e-18 Identity = 41/79 (51.90%), Postives = 47/79 (59.49%), Query Frame = 3
Query: 3 MVENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGN-----EDDGEACRNSFACIDPNAPCVDDDSVAPKLRLGC 224
M ENC Y VG+G CDE NN E C YDGGDCCECTCE +DD + F+CIDPNA CV DD + + C
Sbjct: 89 MFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENC 167
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT4_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 6.960e-18 Identity = 41/75 (54.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query: 6 VENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCE----GNEDDGEACRNS--FACIDPNAPCVDDDSVAPKL 212
V+NC P +G+G+CD+ NN E C YDGGDCC CTC+ G DDG C S FACIDP+APCV+DD L
Sbjct: 95 VQNCGDPWAIGDGNCDKDNNTEECDYDGGDCCSCTCQVPDDGTGDDGSLCGESAVFACIDPDAPCVNDDDFTAFL 169
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 85.5 bits (210), Expect = 1.630e-17 Identity = 44/79 (55.70%), Postives = 53/79 (67.09%), Query Frame = 3
Query: 9 ENCRYPGRVGNGHCDESNNMELCAYDGGDCCECTCEGNEDDGEACRNSFACIDPNAPCVDDDSVAPKLRLGCRNWRRVL 245
E+C G +G+G+CD NN CAYDGGDCCECTCE N G R+ FACIDP APCVDDDSV + C ++ RV+
Sbjct: 176 ESCDAVG-MGDGYCDMDNNNAACAYDGGDCCECTCEPNNKCGG--RSGFACIDPGAPCVDDDSVTVDMIDNC-DYLRVM 250 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7058.15221.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7058.15221.1 >prot_E_fasciculatus_S2_contig7058.15221.1 ID=prot_E_fasciculatus_S2_contig7058.15221.1|Name=mRNA_E_fasciculatus_S2_contig7058.15221.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=91bp IWWKIAGTQAGLEMDTATKVTIWSCARTMAATAANARARATRTTARPAVTback to top mRNA from alignment at E_fasciculatus_S2_contig7058:1628..2975+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7058.15221.1 ID=mRNA_E_fasciculatus_S2_contig7058.15221.1|Name=mRNA_E_fasciculatus_S2_contig7058.15221.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1348bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7058:1628..2975+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7058:1628..2975+ >mRNA_E_fasciculatus_S2_contig7058.15221.1 ID=mRNA_E_fasciculatus_S2_contig7058.15221.1|Name=mRNA_E_fasciculatus_S2_contig7058.15221.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=273bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7058:1628..2975+ (Ectocarpus fasciculatus EfasUO2)back to top |