|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7049.15210.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU33_ECTSI) HSP 1 Score: 933 bits (2411), Expect = 0.000e+0 Identity = 569/671 (84.80%), Postives = 591/671 (88.08%), Query Frame = 1
Query: 1 AQDLVSPLKQSAGVFPKVHSVWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVVDGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKIVKDDQEVQGQVAACLLRRGTIRFDNRAGINVVSSLVKGMGQEALDAHVEFLKGVVQGKPGWADCEDPVANGVATSD------GSDAGSAAERLQAVEALYSLARSSWGGDGXXXKRDARGAAIVAAAGRGGGLEIQGKRLTKTAEFFLEAGFFAPPDGAAATAMPPKTLELCRSKFFSLVADIAAKPLFWQTSTSSGTNKEETKSKSKKSPSKKKLPTGDGGSAGWGALEALWGLHETWQGLEEGGRKLAKGVTVGVDEREACSLALAVVGQIRA-AARDDKLGSAFAGILLMVSLHMLEGSQEGARGAE--RHGHITDLVETYGRMSGSIEGEEDXXXXXXXGDRDEPDPLAMLADVLVAVVAEPSTHSVRGLRDTARRVWGMVCGSTRLTRSALNTLVAAVCGDQDAYATQGGNESSXXXXXXXXXXXXXXXXMANSGKAGAEGKGSSXXXXXXXXXXXXXXXXXXXXXXXKDEVMVDPSDVEALLGGEDEGEDGEGGLQHHAGADKALGALLRLKQSGRKNATLEAQRQGYQIRLRALDLLEV 1986
AQDLVSPLKQSAGVFPKVHS+WGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVVDGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKI+KDDQEVQ QVAACLLRRGTIRFDNR G+NVVSSLVKGMGQEALDAHVEFLKGVVQGKPGW EDPVANGVATS+ GSDAGSAAERLQAVEALYSLARSS XXX GLEIQGKRLTKTAEFFLEAGFFAP DGAAATAM PKTLELCRSKFFSLVADIAAKPLFWQ + SGTNK E+KSKS KSPSKKK PT +GGSAGWGALEALWGLHETWQGLE GGRKL KG++VGVDEREACS+ALAVVG+IRA AARDDKLGSAFAGILLMVSLHMLEGS+E ARG E R HITDLVETYGRMSGS + E XXXXXXX RDEPDPLAMLADVLVAVVAEPSTHSVRGLRDTARRVWGMV GST LTRSALNTLVAAVCGDQD +GGNESSXXXXXXXXXXXXXXXXMA +GK+G+E XXXXXXXXXXXXXXXXXXXXXXXKDEVMVDPSD+EALL GE+E E GE G QHHAGADKALGAL+ LK+ GRK EA+RQGYQIRLRALDLLEV
Sbjct: 295 AQDLVSPLKQSAGVFPKVHSLWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVVDGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKIIKDDQEVQAQVAACLLRRGTIRFDNRTGVNVVSSLVKGMGQEALDAHVEFLKGVVQGKPGWTGSEDPVANGVATSEEPIDGSGSDAGSAAERLQAVEALYSLARSSGXXXXXXXXXXXXXXXXXXXXXXXXGLEIQGKRLTKTAEFFLEAGFFAPADGAAATAMLPKTLELCRSKFFSLVADIAAKPLFWQAN--SGTNKGESKSKSSKSPSKKK-PTDEGGSAGWGALEALWGLHETWQGLEGGGRKLVKGLSVGVDEREACSVALAVVGRIRAGAARDDKLGSAFAGILLMVSLHMLEGSKEEARGREMERSQHITDLVETYGRMSGSAKDEXXXXXXXXXXXRDEPDPLAMLADVLVAVVAEPSTHSVRGLRDTARRVWGMVSGSTPLTRSALNTLVAAVCGDQD----EGGNESSXXXXXXXXXXXXXXXXMAKNGKSGSEXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDEVMVDPSDMEALLAGEEEDEGGEEGFQHHAGADKALGALIGLKKLGRKKGAQEAERQGYQIRLRALDLLEV 958
BLAST of mRNA_E_fasciculatus_S2_contig7049.15210.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR26_9STRA) HSP 1 Score: 138 bits (348), Expect = 2.690e-31 Identity = 78/179 (43.58%), Postives = 111/179 (62.01%), Query Frame = 1
Query: 10 LVSPLKQSAGVFPKVHSVWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVVDGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKIVKDDQEVQGQVAACLLRRGTIRFDNRAGINVVSSLVKGMGQEALDAHVEFLKGVVQG 546
L+ LKQS FP++HSVWGR+WDDLGL+ +P A +S KRL+ L + W+ VVD L + + KG+A+LL+ QVL+R P A V V+S GI+RL+LNH E L ++ L + D +VQ +AA LL++G RFD R G V+ L++ + ++ HVEFLK V +G
Sbjct: 294 LLEALKQSTRAFPRLHSVWGRIWDDLGLT-LPRPDA-ISDKRLRYLKDFWTTVVDEGLADGTHTTKGSALLLVSQVLRRAPPAAVPVVISGGIIRLLLNHAGKEGATLHAMARSLLAGVSAATTDSADVQVALAASLLQKGGPRFDARTGTRTVAELLEYLDAASVLKHVEFLKAVARG 470
BLAST of mRNA_E_fasciculatus_S2_contig7049.15210.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TNC9_MICPS) HSP 1 Score: 63.9 bits (154), Expect = 8.730e-7 Identity = 56/218 (25.69%), Postives = 85/218 (38.99%), Query Frame = 1
Query: 22 LKQSAGVFPKVHSVWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVV-DGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKIVKD---DQEVQGQVAACLLRRGTIRFDNRAGINVVSSLVKGMGQEALDAHVEFLKGVVQGKPGWADCEDPVANGVATSDGSDAGSAAERLQAVEALYSL 663
L +++ P++HSVW + P G L W +V DG L + S + L +L A V + SPG R +LN+ +NYL + L Q+ K Q+V+ V A L R G RFD + N V L++ + + ++ L G+ P D +A G G + RL A+E L
Sbjct: 337 LMEASYTHPQMHSVWAWFLSRVASVPGG-------------LEATWDVLVEDGLLVSGSHQRRYLGFRLFASMLPLASAQSVPALFSPGFTRCLLNNLAKPDNYLHAAAADCLDQIVAFAKSADTKQDVKLSVIAALQRLGPNRFDKISKKNAVRELIQSLSVDDASGYMRELMGIFVASPSSDDDASAMAGGGTDQPGGHLLGSKRRLWALEQAAGL 541
BLAST of mRNA_E_fasciculatus_S2_contig7049.15210.1 vs.
Match: Predicted (protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MP70_MICPC) HSP 1 Score: 63.9 bits (154), Expect = 9.390e-7 Identity = 56/218 (25.69%), Postives = 85/218 (38.99%), Query Frame = 1
Query: 22 LKQSAGVFPKVHSVWGRLWDDLGLSPAGQPRAPLSAKRLKKLGEVWSCVV-DGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLILNHTKGEENYLFSLVHMTLKQLPKIVKD---DQEVQGQVAACLLRRGTIRFDNRAGINVVSSLVKGMGQEALDAHVEFLKGVVQGKPGWADCEDPVANGVATSDGSDAGSAAERLQAVEALYSL 663
L +++ P++HSVW + P G L W +V DG L + S + L +L A V + SPG R +LN+ +NYL + L Q+ K Q+V+ V A L R G RFD + N V L++ + + ++ L G+ P D +A G G + RL A+E L
Sbjct: 319 LMEASYTHPQMHSVWAWFLSRVASVPGG-------------LEATWDVLVEDGLLVSGSHQRRYLGFRLFASMLPLASAQSVPALFSPGFTRCLLNNLAKPDNYLHAAAADCLDQIVAFAKSADTKQDVKLSVIAALQRLGPNRFDKISKKNAVRELIQSLSVDDASGYMRELMGIFVASPSSDDDASAMAGGGTDQPGGHLLGSKRRLWALEQAAGL 523
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7049.15210.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 4
| Match Name | E-value | Identity | Description | |
| Uncharacterized | 0.000e+0 | 84.80 | protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LU33... | [more] |
| Uncharacterized | 2.690e-31 | 43.58 | protein n=1 Tax=Tribonema minus TaxID=303371 RepID... | [more] |
| Hypothetical | 8.730e-7 | 25.69 | protein (Fragment) n=1 Tax=Micromonas pusilla TaxI... | [more] |
| Predicted | 9.390e-7 | 25.69 | protein n=1 Tax=Micromonas pusilla (strain CCMP154... | [more] |
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 942.2 |
| Seed ortholog evalue | 1.3e-271 |
| Seed eggNOG ortholog | 2880.D8LU33 |
| Preferred name | MYBBP1A |
| Model size | 1986 |
| KEGG ko | ko:K02331,ko:K11836 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000182,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003714,GO:0003824,GO:0003887,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006091,GO:0006139,GO:0006259,GO:0006351,GO:0006355,GO:0006356,GO:0006360,GO:0006725,GO:0006807,GO:0006915,GO:0006950,GO:0007154,GO:0007165,GO:0007623,GO:0008134,GO:0008150,GO:0008152,GO:0008219,GO:0008270,GO:0009058,GO:0009059,GO:0009267,GO:0009303,GO:0009605,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010941,GO:0010942,GO:0012501,GO:0015980,GO:0016070,GO:0016072,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0022900,GO:0022904,GO:0023052,GO:0031074,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032501,GO:0032774,GO:0032922,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0035556,GO:0040029,GO:0042149,GO:0042564,GO:0042594,GO:0042790,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044087,GO:0044089,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045333,GO:0045787,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045943,GO:0046483,GO:0046872,GO:0046914,GO:0048511,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0051726,GO:0055114,GO:0060255,GO:0065007,GO:0070013,GO:0070888,GO:0071156,GO:0071158,GO:0071496,GO:0071704,GO:0071897,GO:0072331,GO:0072332,GO:0080090,GO:0090068,GO:0090069,GO:0090070,GO:0090304,GO:0097159,GO:0097190,GO:0097193,GO:0097659,GO:0098781,GO:0140097,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901836,GO:1901838,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000209,GO:2000210,GO:2001141 |
| Exons | 13 |
| EggNOG free text desc. | DNA-directed DNA polymerase activity |
| EggNOG OGs | KOG1926@1,KOG1926@2759 |
| EC | 2.7.7.7,3.4.19.12 |
| Cds size | 1986 |
| COG Functional cat. | S |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01000,ko01002,ko03036,ko03400,ko04147 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842364.877346-CDS-E_fasciculatus_S2_contig7049:602..812 | 1696842364.877346-CDS-E_fasciculatus_S2_contig7049:602..812 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 603..812 - |
| 1696842364.8921676-CDS-E_fasciculatus_S2_contig7049:1367..1555 | 1696842364.8921676-CDS-E_fasciculatus_S2_contig7049:1367..1555 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 1368..1555 - |
| 1696842364.901601-CDS-E_fasciculatus_S2_contig7049:2166..2270 | 1696842364.901601-CDS-E_fasciculatus_S2_contig7049:2166..2270 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 2167..2270 - |
| 1696842364.9112113-CDS-E_fasciculatus_S2_contig7049:2805..2899 | 1696842364.9112113-CDS-E_fasciculatus_S2_contig7049:2805..2899 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 2806..2899 - |
| 1696842364.9262338-CDS-E_fasciculatus_S2_contig7049:3212..3412 | 1696842364.9262338-CDS-E_fasciculatus_S2_contig7049:3212..3412 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 3213..3412 - |
| 1696842364.9352171-CDS-E_fasciculatus_S2_contig7049:3682..4040 | 1696842364.9352171-CDS-E_fasciculatus_S2_contig7049:3682..4040 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 3683..4040 - |
| 1696842364.9457617-CDS-E_fasciculatus_S2_contig7049:4551..4812 | 1696842364.9457617-CDS-E_fasciculatus_S2_contig7049:4551..4812 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 4552..4812 - |
| 1696842364.9668906-CDS-E_fasciculatus_S2_contig7049:5095..5168 | 1696842364.9668906-CDS-E_fasciculatus_S2_contig7049:5095..5168 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 5096..5168 - |
| 1696842364.9802566-CDS-E_fasciculatus_S2_contig7049:5467..5572 | 1696842364.9802566-CDS-E_fasciculatus_S2_contig7049:5467..5572 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 5468..5572 - |
| 1696842364.9927206-CDS-E_fasciculatus_S2_contig7049:5940..6018 | 1696842364.9927206-CDS-E_fasciculatus_S2_contig7049:5940..6018 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 5941..6018 - |
| 1696842365.0047112-CDS-E_fasciculatus_S2_contig7049:6442..6523 | 1696842365.0047112-CDS-E_fasciculatus_S2_contig7049:6442..6523 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 6443..6523 - |
| 1696842365.021388-CDS-E_fasciculatus_S2_contig7049:7070..7151 | 1696842365.021388-CDS-E_fasciculatus_S2_contig7049:7070..7151 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 7071..7151 - |
| 1696842365.048091-CDS-E_fasciculatus_S2_contig7049:7692..7845 | 1696842365.048091-CDS-E_fasciculatus_S2_contig7049:7692..7845 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7049 7693..7845 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7049.15210.1 >prot_E_fasciculatus_S2_contig7049.15210.1 ID=prot_E_fasciculatus_S2_contig7049.15210.1|Name=mRNA_E_fasciculatus_S2_contig7049.15210.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=662bp
AQDLVSPLKQSAGVFPKVHSVWGRLWDDLGLSPAGQPRAPLSAKRLKKLG EVWSCVVDGALTNTSLNNKGTAVLLLKQVLQRVPAAGVWHVLSPGIVRLI LNHTKGEENYLFSLVHMTLKQLPKIVKDDQEVQGQVAACLLRRGTIRFDN RAGINVVSSLVKGMGQEALDAHVEFLKGVVQGKPGWADCEDPVANGVATS DGSDAGSAAERLQAVEALYSLARSSWGGDGGGGKRDARGAAIVAAAGRGG GLEIQGKRLTKTAEFFLEAGFFAPPDGAAATAMPPKTLELCRSKFFSLVA DIAAKPLFWQTSTSSGTNKEETKSKSKKSPSKKKLPTGDGGSAGWGALEA LWGLHETWQGLEEGGRKLAKGVTVGVDEREACSLALAVVGQIRAAARDDK LGSAFAGILLMVSLHMLEGSQEGARGAERHGHITDLVETYGRMSGSIEGE EDDDDDEEEGDRDEPDPLAMLADVLVAVVAEPSTHSVRGLRDTARRVWGM VCGSTRLTRSALNTLVAAVCGDQDAYATQGGNESSSEEEEEEDDNDEDDE EMANSGKAGAEGKGSSDGEQESSSDDSDSESDNDENDGDKDEVMVDPSDV EALLGGEDEGEDGEGGLQHHAGADKALGALLRLKQSGRKNATLEAQRQGY QIRLRALDLLEV back to topmRNA from alignment at E_fasciculatus_S2_contig7049:603..7845- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7049.15210.1 ID=mRNA_E_fasciculatus_S2_contig7049.15210.1|Name=mRNA_E_fasciculatus_S2_contig7049.15210.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7243bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7049:603..7845- (Ectocarpus fasciculatus EfasUO2) GCGCAGGACCTGGTATCGCCGCTGAAGCAGTCGGCAGGCGTCTTCCCAAA
GGTTCACTCGGTGTGGGGACGATTGTGGGACGACCTTGGCCTTTCCCCCG
CGGGCCAGCCTCGTGCCCCGCTTAGCGCCAAGCGCCTGAAGAAGCTCGGG
GAGGTAAGAACCCGTTTTTTTGAAGTAGTCTAGACTATGTTTTGGTCTTG
GAAAATGATGAACAATTTTGGTGAGAGCTTTCTATGGACTCGTCCTGAGT
CCGGGCTAGCATGAGAAGGTGGGGGGGATGGGCGCATCTGCGTCACACAG
ATGGAGTTGTTCAGAAAGGGTTGTTGTCTCGGAAGGCCGGCGAGAACGTC
CCTCAATGGGCGGGACATGCCAGAAATCACATCTTGTGGGCGGGTTGTAC
CAGAATGCACCGTCTGTGGGCGGGTTTCCCGGGAAGCACGCTCGGTTCAC
GGGTACACCGAAAACACCCGCCGTTGGCGGAATTACCAGAGGTCGCATCA
ATGTTGCACAACATGGCCTCATTTTTCTGTCTGAAAGTTCTCGACGTAGA
CCCTCGTCAAAGCCTTGGTTGACCTGCTTCGGCGCAACCCGCGTTTCGAT
GTGACAGGCCTGACGACGCTAGCCCTATCCCATCCCTCCCCACCCTCACC
CTCGCGTCATTTTGAAATGACGTCATGGCATGGTTGTGGAGCAGGTTTGG
TCTTGTGTGGTGGACGGAGCCCTGACGAACACGTCGCTCAACAATAAGGG
GACTGCGGTCCTGCTGCTCAAGCAGGTTAGTCACTCCCTCCTTTTCTCTC
TCCATCTCTCTGCTTGTGAGACGGGTCTGGGGATAGGGTAGGATGTATGA
AGACCATGCTTCACAATCCAAGCTAGACCGGACACTGCGAGTCTTTTTTG
TCCTCGGCGCATCAGCGCTTGTTAACGATCCATTCGTCAAATTTAATTGC
TGCTACAGCTGAGCTGAGCTGCCATGTACAGTGTTGGTGATGCCGGTGTT
CTGGCGTGCCACCGACATCAACGTTGACGTCCACACGACAACAGTACATC
GAGTGTTGTATGGTACAGTACCACCACATGCCCACTGCTGTCGTGATGTG
ATGTGATGTGATATGCATACCACCACCGAGCGTCGTCGAAGACTGCTGTG
GCAAGAACTGGAGAATCATGGCGAAATTGCTGCTTGACGTAGCGAGAAAA
ACTCCCATCTCTCGTTTTTGTTGATGCCTACTAGTCTTGTTGGTGTCGAG
CCGCGCTCACCTCCGGTCCTCCGATTTCTTTTTCCTTTTTGCGTCTTACT
GCCTGCCCCTGCACGCACGCAGGTGTTGCAAAGGGTGCCCGCGGCGGGTG
TGTGGCACGTGCTCTCCCCGGGCATCGTTCGCCTCATTCTCAACCACACC
AAGGTGCGCGATTTTCGTTTTTTTCGTGACTTGTTTGATCTTATCATCCC
CTCTTTGTTTTTGGGGAGTCGACTTTCTTGTTGGGTTGTATTTGATTTCG
ATTTCTGAATTATCGATGCTTTGCACTTTGCAACCTCTCGCACGCCAAGT
TCGGTTTGTTTACTTTTTTACCGCGAACTACCGGTATTTTGGTTGCTTTT
TCTGCCCGTGCAGGCTAGCCTACGATTGCAACCATGTTGGTTGACGATGC
GCCGATCTGCACTTTGATAATGGGTGTTGTAAAGGTAAAGGCTGTTGTTG
ATTTGATTGTTCCCGTGTTACAGCGTCTCTGCTTCTGTTTTACGTTGTTC
ATCCATGTGATGGTGCCTAAACGAAGCGTTGAATGAATTGTATGCCCGCG
CATTTTTTTTTTTTTTTTGTCGTTCAGGGAGAAGAAAACTACCTGTTTTC
CTTGGTGCACATGACGCTCAAGCAGCTGCCGAAGATCGTCAAGGATGATC
AGGAGGTAAGTATGTGTGCTATCATCCATGTATAATTCACAAGGTAGCTT
TGGGGGAAGGGGGGGGGGTCAGATCGTATAGGTTTCATGATGAGAAGATG
AGTGAAGTGCTAGAAAAGTGGCTACTTCCGCGTGGCCAAAATGTTCCAGC
ACCGCCAATTCAACGAGGTTACACAGCAGTATCCCGACGGTAGGAGCTCA
AATACAGAGGAAGGTTGGTGCGCCCTCCCCCCCCCCTCTTGCCGTAGTAG
CTTTCCCCGTATGGGTTGCGCTAGTTGACGTGGACGGCGCCTGCTTTTCT
TTGCAGGGTATGTGCCTTCTTTGAACGTCTGGATCGATTTTTGCCCTTTT
TTTTTTTTTCTTCTCTTTGTCAGGTGCAGGGGCAGGTTGCGGCGTGTCTT
CTCCGCAGGGGCACCATCCGCTTCGACAACCGGGCCGGGATCAACGTGGT
GTCCTCCCTCGTCAAGGGAATGGGGCAGGTGTGTTCCAGTATCACTCCCA
GTCTCGCCTGCGATACGTGTGGCATGTGGCATGCACCTTCCTATATTCTG
TTCGCCGTCGACGTCTCTGATACCCGTTTCGCGGGATGCACGGCGGTGTG
TCTCCCTCATTTTGACATCGCACCAGGAGCAACCCGTTTGACTTGTCATC
CGTCATGTTCATGTTTCATCTGTTGTGGCCGAGCGCCGTCTAACTATGTA
TGCGTGCGAGTGCCTCACCTGTCTGTCCCCCTCGCACATACACATACCTG
CTCCACGTACCGTCTGGACACCTCCAGGAAGCCTTGGACGCCCACGTGGA
GTTCCTCAAGGGCGTGGTTCAGGGCAAGCCAGGGTGGGCAGACTGCGAAG
GTGCGTAGTTACCTTGCCTACATGTAGTCAGGAGACAGGCACTGACTGCT
GTGCGGTCGTTTTCATGTTTGCCTGTCGATGGCGATGCCGCCGTCGCCGC
AGGGATGCAGCAGGAGAGCGCGTCCTTGGAAGAGCGGCACTTCACCGCCA
CCATCACGTCTTGTTCGTGGGGTTTTCTACCGTAGAAAGGCTTCCTCTGC
AATTCACCCGCAATGACCACGACATAACAACCTCGATCTCTGCCGACCCT
GGCGCCGCTAAACCCTCAATTGTTTCGCCACAGACCCCGTCGCGAACGGC
GTTGCAACCTCCGATGGTTCCGATGCCGGTTCGGCGGCGGAACGCCTCCA
GGCGGTGGAAGCCCTCTACTCCTTGGCGAGGAGTTCCTGGGGTGGTGACG
GGGGGGGGGGCAAGAGGGACGCCAGGGGCGCCGCGATTGTTGCTGCTGCT
GGGCGGGGGGGGGGCTTGGAGATCCAGGGGAAGCGACTAACCAAGACTGC
TGAGTTTTTCCTGGAGGCCGGTTTCTTCGCCCCCCCAGATGGAGGTATGA
TAGGTGTCTGCTCTCTGCTCTGTTTTGTGTGTGCAAAGGGTGCTCTCGAT
GTGCAAGCAGAAGCGATTTAGTGTTGGTTTTGGTGGGTGAAGCAGCCGGG
GAAAAGAGAAGTCGTGGTTTTTAATTTATCGTTTGGTTGGTTTTTGTACG
TGTAGGCCATACATGCACTTCTTTCCGACGGCAACAAAGGTGGAGCCTCT
GGCGCACGTATCAAGCGATTGATTATATCACTATATCATTATATCCCCAC
GCAGGGTTGGACGAGTCAGCGTTTGTGTTTTGTTGCTATCGGGCAAGGCG
GAATCGAATGGTTCAACGTGTGTTTACTCTGTTCGTTTTCCCCTTCAACA
CGTCCCGCTCATTGCAAATACGTGCTAACGTGCATCCAGCAACATTCATC
CAAAGTCCCACATCGATGTCTGCCTATCTCACCCCGCATCTCCCATTCTC
TCTCTCTCTCTCTCTCCCTCTATCCCTCTCTTCCCTGCTGTCTTTTTGTC
CACAGCGGCGGCGACCGCAATGCCTCCGAAGACGCTGGAGCTCTGCCGCT
CCAAGTTCTTCAGCCTCGTAGCCGACATCGCCGCCAAGCCGCTCTTCTGG
CAAACTAGCACTAGCTCCGGCACCAACAAGGAAGAGACGAAGAGCAAGAG
CAAAAAGTCTCCCTCCAAGAAAAAGCTACCTACCGGTGACGGGGGCTCCG
CAGGATGGGGAGCGCTTGAGGCGCTGTGGGGTTTGCACGAGACCTGGCAG
GGGCTGGAGGAGGGCGGGAGGAAGCTCGCGAAGGGGGTGACGGTGGGCGT
GGACGAGCGGGAGGCGTGCTCGTTGGCGCTGGCTGTTGTCGGGCAAATCA
GGGCCGCAGCAAGGTATGTCGGAGTCCTTTTGGGCTTGTACTCAGTGTAA
ATGCATGCCGTATTATATAATAGTCGTTAGATCAAAGGGGTTGGGAGTTA
CATAGAGGTAGGTGATGATGGACATGAGAAAGGGTTGCCCTTGCTCTTGC
AGCGGTACGCTCAAAACGGTGGTCGAGACCAGACTCCGGGAGAGTTTACG
GTTGTAGAGTTGTAGAGATATTAGGCCCACCAACCCTTGTTGTTGATTGC
TGCTGCTGCTGCTGCTGATGGTCCGTGCCACAGGGACGACAAGCTCGGCT
CTGCGTTCGCCGGCATCCTGCTGATGGTGTCGCTGCACATGCTGGAAGGG
TCGCAGGAGGGGGCACGCGGTGCTGAGCGCCACGGGCACATCACTGATCT
CGTCGAGACCTACGGCCGCATGTCTGGCTCGATTGAGGGCGAAGAGGATG
ACGATGATGATGAAGAGGAGGGGGACAGAGACGGTGAGGGAGAGATATGG
TTGATATGGTTGCGACTGTAGATGGTGGCCTGGGATCCCGTGTGGAACGG
TTCTGGCATGGGATGGTGCGGCAAAATCGCGGTGTACGGTGGGGAACGAA
GGACGTCATGTTGTATTGCCGCCGCGAGGGACAGCGGTTCGATGGTGTAC
GAGTTAGCCACGACCATCGTCCCTTTCGATGAAGCGACAAAAGCACAAAG
CAAACCAGCTTTGTGAGCAGTCGCTCTCTGTCTAGCCCGCCTTCTCTGTC
CTCGTCTAAGCTTTAACTTTTCTCCCCTTTGCCCCGGCGCGTGCAGAGCC
GGACCCTCTGGCCATGCTTGCTGACGTCCTCGTGGCCGTCGTTGCTGAGC
CATCGACTCACTCCGTCCGGGGGCTACGTGACACGGCCAGGTGAGGATGA
AGATTAGGATAAGGATTAGGGGGGGAAGGGGCGGGGGGTTTCAGGATTCG
TTTCGCCGCTACCGCCGTTCGTTTTGCTGCTGCTGCTGTTGCTGTTTGTT
GTTGTGGTTGTTGTCGTTAAACGATGTTGTTGCTGTTGCTATTGCTTTGT
TTGTTGGCCACCCTTTGCTGTGTGCTACGTATGGTTTGCGTGCTTGGTGT
GCTTGACTGAGACTGACGTCACTCTTTTTATTTGGTCGGCCGGTTAGGTT
TAGCGCTGTCGACGCTAGAATGGGAATGAAGACATTGACGGGGCGTGCTT
CTTCTCCCTTGGTGTAGCAGTCGCACTACACGTATGCAATGCATACCAAC
ACGTGCTGTATCGTTCATCTACCTGCACACATACGCCACCATCTCCTTTC
AGCACAAGCATGCGCTGACTTGACTGGCCTCTCCCTCCCTCTCTCTCTGT
CTTCTCTGTCTCTGCCTCTCTCCCTTGTCTCTCTCTCTCTATCTCTCTCT
CCGCATCCTCCCTTGCGTTTGGCAGGCGCGTATGGGGTATGGTGTGCGGC
TCTACCCGTTTGACGCGGTCTGCTCTCAACACGTTAGTGGCCGCCGTGTG
CGGAGACCAGGATGCCTACGCCACCCAAGGTATGCATAGGAGAGAGTAGA
GAGTAGAGCCTCGCTCTTTCAAGCAAGGAAAACTAAAAGTACAGCGTGCA
AGGGTTTCCCTGTCTCTCGCAGGCAGACGTGTTTTGTTGACGGGGTACAC
GGGGGTGAGGTACACAAGTCACAATGCCACGCAGGAACGGTTGCAGTATT
GTGGTTGTGCTCTTTTTGATGGTCGAAAGGTGTCGAGGTTTGTTTTTTTC
CTCGAAGCGTCTGCCTCGTCATTGTTTCGGCAACGTATCAAAACTGTTGT
AGCAACAGTTGGAAAATGTGGTGATGAGCGATCCTTGTAGTTTTTTCCCA
CGGAAACTCCTTTCTTTGCGCTGAAGAGCAGGAAATCAGAAATTCGTTGA
CGAGTCGGGCTCTCTCCGCACCCACTTGTTTGTGGAGCAATCAAGCTTCG
AGAGGTGCCTGCCATCTCTCCACTTCTTACCGTACGACAATCTATTATAT
TATAGTCTGGGGGCTTCCCCTTACCGATGTGTGTGTGTGCGTGTTTTTCT
TTGATTAGCACCGACCGCGCTTGGTGGCTCGTCAATGATACAACGTCAGT
CTCACGTGTGCGTGTTTCCTCCGATAAATATTGTAAACAGGCGGGAACGA
ATCATCCTCAGAAGAGGAGGAAGAAGAAGACGATAATGACGAAGACGACG
AGGAGATGGCAAACAGTGGGAAGGCTGGGGCTGAGGGGAAGGGCAGCAGT
GATGGTGAGCAGGAGAGCAGCTCCGACGACAGCGACAGCGAGAGCGACAA
CGACGAGAACGATGGAGACAAAGATGAGGTGAGGTAACACATAATTCAGT
GACATACTCCACACAAAATAGCAAAACTTTCCCACGTGGCATGATTCTCT
ATTATTGACAACCTCGTAGCTGGGTTTTCTGATTGCTATGCCTTTTCTGT
GGCGAATTTCGTTTTTGGCTGCACGTATCTGTTTGTTGTCTGAGCCACGG
CCATCTGGGCCACGACCAGTGGCCGCGGAACTTGGCTTTACTACGGGTTG
GACAAGTGCAGAAGAGGAAAGAGGAGAGGAAACAAACAACGCAACGTGTT
TTTCTCTCTTCCCTTGACACACAAAAGGAGAGGAGTAAGGAGTGACCACA
ACTTGTTTTGTGTCTAGCCTTGACACACAAAGAGGAGAGGAAGCAACAAC
AACGTTTTTCTCTCTGTTGTACCCGTGAGACACAAAGAAGAGGGGAGGAA
GCAACCAACAACTTCTTTTTTTTTCTACACGAACAAAAAAAAGAGGAGAT
GAAGCAACCAATAACATGTTTTTTTTTTCTACGCTGACACGTACTCTGAC
TGCATTGCTGTACGATCGATGCACGTTATTTAGGTGATGGTGGACCCGTC
AGATGTCGAAGCACTGTTGGGTGGAGAAGACGAGGGTGAAGACGGAGAAG
GAGGTTTACAGCACCATGCGGGGGCCGACAAGGCATTGGGAGCACTCCTT
AGGCTAAAGCAGTCTGGGCGGAAGAACGCTACTCTGGAAGCACAGCGACA
GGGGTACCAGATACGACTTCGCGCCTTGGATCTGCTAGAGGTG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7049:603..7845- >mRNA_E_fasciculatus_S2_contig7049.15210.1 ID=mRNA_E_fasciculatus_S2_contig7049.15210.1|Name=mRNA_E_fasciculatus_S2_contig7049.15210.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1986bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7049:603..7845- (Ectocarpus fasciculatus EfasUO2) GCGCAGGACCTGGTATCGCCGCTGAAGCAGTCGGCAGGCGTCTTCCCAAA GGTTCACTCGGTGTGGGGACGATTGTGGGACGACCTTGGCCTTTCCCCCG CGGGCCAGCCTCGTGCCCCGCTTAGCGCCAAGCGCCTGAAGAAGCTCGGG GAGGTTTGGTCTTGTGTGGTGGACGGAGCCCTGACGAACACGTCGCTCAA CAATAAGGGGACTGCGGTCCTGCTGCTCAAGCAGGTGTTGCAAAGGGTGC CCGCGGCGGGTGTGTGGCACGTGCTCTCCCCGGGCATCGTTCGCCTCATT CTCAACCACACCAAGGGAGAAGAAAACTACCTGTTTTCCTTGGTGCACAT GACGCTCAAGCAGCTGCCGAAGATCGTCAAGGATGATCAGGAGGTGCAGG GGCAGGTTGCGGCGTGTCTTCTCCGCAGGGGCACCATCCGCTTCGACAAC CGGGCCGGGATCAACGTGGTGTCCTCCCTCGTCAAGGGAATGGGGCAGGA AGCCTTGGACGCCCACGTGGAGTTCCTCAAGGGCGTGGTTCAGGGCAAGC CAGGGTGGGCAGACTGCGAAGACCCCGTCGCGAACGGCGTTGCAACCTCC GATGGTTCCGATGCCGGTTCGGCGGCGGAACGCCTCCAGGCGGTGGAAGC CCTCTACTCCTTGGCGAGGAGTTCCTGGGGTGGTGACGGGGGGGGGGGCA AGAGGGACGCCAGGGGCGCCGCGATTGTTGCTGCTGCTGGGCGGGGGGGG GGCTTGGAGATCCAGGGGAAGCGACTAACCAAGACTGCTGAGTTTTTCCT GGAGGCCGGTTTCTTCGCCCCCCCAGATGGAGCGGCGGCGACCGCAATGC CTCCGAAGACGCTGGAGCTCTGCCGCTCCAAGTTCTTCAGCCTCGTAGCC GACATCGCCGCCAAGCCGCTCTTCTGGCAAACTAGCACTAGCTCCGGCAC CAACAAGGAAGAGACGAAGAGCAAGAGCAAAAAGTCTCCCTCCAAGAAAA AGCTACCTACCGGTGACGGGGGCTCCGCAGGATGGGGAGCGCTTGAGGCG CTGTGGGGTTTGCACGAGACCTGGCAGGGGCTGGAGGAGGGCGGGAGGAA GCTCGCGAAGGGGGTGACGGTGGGCGTGGACGAGCGGGAGGCGTGCTCGT TGGCGCTGGCTGTTGTCGGGCAAATCAGGGCCGCAGCAAGGGACGACAAG CTCGGCTCTGCGTTCGCCGGCATCCTGCTGATGGTGTCGCTGCACATGCT GGAAGGGTCGCAGGAGGGGGCACGCGGTGCTGAGCGCCACGGGCACATCA CTGATCTCGTCGAGACCTACGGCCGCATGTCTGGCTCGATTGAGGGCGAA GAGGATGACGATGATGATGAAGAGGAGGGGGACAGAGACGAGCCGGACCC TCTGGCCATGCTTGCTGACGTCCTCGTGGCCGTCGTTGCTGAGCCATCGA CTCACTCCGTCCGGGGGCTACGTGACACGGCCAGGCGCGTATGGGGTATG GTGTGCGGCTCTACCCGTTTGACGCGGTCTGCTCTCAACACGTTAGTGGC CGCCGTGTGCGGAGACCAGGATGCCTACGCCACCCAAGGCGGGAACGAAT CATCCTCAGAAGAGGAGGAAGAAGAAGACGATAATGACGAAGACGACGAG GAGATGGCAAACAGTGGGAAGGCTGGGGCTGAGGGGAAGGGCAGCAGTGA TGGTGAGCAGGAGAGCAGCTCCGACGACAGCGACAGCGAGAGCGACAACG ACGAGAACGATGGAGACAAAGATGAGGTGATGGTGGACCCGTCAGATGTC GAAGCACTGTTGGGTGGAGAAGACGAGGGTGAAGACGGAGAAGGAGGTTT ACAGCACCATGCGGGGGCCGACAAGGCATTGGGAGCACTCCTTAGGCTAA AGCAGTCTGGGCGGAAGAACGCTACTCTGGAAGCACAGCGACAGGGGTAC CAGATACGACTTCGCGCCTTGGATCTGCTAGAGGTG back to top
|