mRNA_E_fasciculatus_S2_contig703.15194.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Myb-like (DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 593 bits (1528), Expect = 4.560e-209 Identity = 368/455 (80.88%), Postives = 378/455 (83.08%), Query Frame = 1
Query: 1 ALDGSIASDCRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDKLDHRFLEGLLQPTALNMSPEREADNNDNSSEYDGGNNDDGGELERYMKAAKLAALEVLSSSSTKETKRHVTHAEQRRLIEVAHSVDRACDKDGNSTVDENLISAAITIVSTNAAETPNDVIMAAIKLASVARHGFVEKFREKLMETGGVHCTTTKQKAAPA--ANRNASTISQKSSAXXXXXXXXXXXXXGKKRPLSIDATNGSAQDAVAPSHSPPXXXXXXXXXXXXFPMVPXXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPGDGDQHGYDKWAMPPVPDSMRGSFGLPRGVGVSRGSGGGVS 1359
ALD SI S+ RRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEID+LDHRFLEGLLQPTALNMSPERE D + R+V+HAEQRRLIEVAHSVDRACDKDG TVDENLISAAITIVSTNAAETPNDVIMAAIKLASVAR GFVEKF+++LMETGGVHCTTTK K APA A RNASTISQKSSA GKKRPLSIDA NGSAQDAVAPSHSP XXXXXXXXXXXX PM XXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPG+GDQ+GYDKWAMPPVPDSMRGSF LPRG G RGSG GVS
Sbjct: 2 ALDNSIVSESRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSGPPQRSSLPAIEIDQLDHRFLEGLLQPTALNMSPERETDKTNXXXXXXXXXX-----XXXXXXXXXXXXXXXXXXXXXXXXXRNVSHAEQRRLIEVAHSVDRACDKDG--TVDENLISAAITIVSTNAAETPNDVIMAAIKLASVARDGFVEKFKQRLMETGGVHCTTTKHKPAPAPPAKRNASTISQKSSAAADGSGGS-----GKKRPLSIDAANGSAQDAVAPSHSPXXXXXXXXXXXXXXPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPSAIGLEPGEGDQNGYDKWAMPPVPDSMRGSFCLPRGGGGPRGSGSGVS 444
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.390e-52 Identity = 81/117 (69.23%), Postives = 97/117 (82.91%), Query Frame = 1
Query: 43 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 393
+RRVW++EED AIR LV +HGTRSW+ I E + D++I GR+GKQCRERWHNHLDP+I KG WTPEEE ++ + E+GN+WSEIAKRLPGRTDN VKN WYS MRRNVR L+REVS
Sbjct: 52 DRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHWYSFMRRNVRRLNREVS 168
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN) HSP 1 Score: 174 bits (441), Expect = 1.670e-49 Identity = 77/119 (64.71%), Postives = 94/119 (78.99%), Query Frame = 1
Query: 37 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 393
S +RRVWS++ED AI+ LV R+GTRSW+ I EH+ +DY+I GR+GKQCRERWHNHLDP I K WT +EE ++ +GN+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+
Sbjct: 3 SGDRRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVN 121
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV5_9PHAE) HSP 1 Score: 174 bits (440), Expect = 1.190e-46 Identity = 144/341 (42.23%), Postives = 149/341 (43.70%), Query Frame = 1
Query: 346 YSSMRRNVRTLSREVSGPPQRSSLPAIEIDKLDHRFLEGLLQPTALNMSPEREADNN---------------------------------------------------------------------------------------------------DNSSEYDG--GN-------NDDGG--------------------------------------------------------------------------ELERYMKAAKLAALEVLSSSSTKETKRHVTHAEQRRLIEVAHSVDRACDKDGNSTVDENLISAAITIVSTNAAETPNDVIMAAIKLA 822
YSSMRRNVRTLSREVSGPPQRSSLPAI+ID+LDHRFLEGLLQPTALNMSPEREAD N DN E G GN N +GG ELERYMKAAKLAALEVLSSSSTKE KR+V+HAEQRRLIEVAHSVDRAC KDG TVDENLISAAITIVSTNAAETPNDVIMAAIKLA
Sbjct: 4 YSSMRRNVRTLSREVSGPPQRSSLPAIDIDQLDHRFLEGLLQPTALNMSPEREADKNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDNRPERSGDRGNGYVNGFDNREGGVLKKLRRCSNRGVGXXXXXXXXXXXXXXXXXXXXXXXXXALIAKRQSKPQPAGPAKKHKGPYKAVRARKATGLDELERYMKAAKLAALEVLSSSSTKEAKRNVSHAEQRRLIEVAHSVDRACAKDG--TVDENLISAAITIVSTNAAETPNDVIMAAIKLA 342
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN) HSP 1 Score: 167 bits (422), Expect = 9.750e-46 Identity = 95/201 (47.26%), Postives = 120/201 (59.70%), Query Frame = 1
Query: 43 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIG-NRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS-GPPQRSSLPAIEIDKLDHRFLEGLLQPTALNMSPEREADNNDNSSEYDGGNNDDGGELERYMKAAKLAALEVLSSSSTKETK 639
+RRVW+ +ED+AIR LV ++GTRSW+ I EH+ D++I GR+GKQCRERWHNHLDP I K WT EEE ++ +G N+WSEIAK LPGRTDN VKN WYS MRRNVR L+REV+ G P + I R + P S R+A N EL+RY AA AA EVL ++ + +
Sbjct: 6 DRRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHWYSFMRRNVRRLNREVNDGQPNHQH---VGIVAKQARPSDSFQAPPKRGRS--RKAANL--------------AELQRYFTAAAEAASEVLHEDTSSDNR 187
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Transcription (factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 174 bits (441), Expect = 3.990e-44 Identity = 80/128 (62.50%), Postives = 96/128 (75.00%), Query Frame = 1
Query: 37 SENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV-SGPPQRSSL 417
S +RR WS+ EDDAIR LVK HGT+ W+TI L +DY I R+GKQCRERWHNHLDP+I+K WT EEEA++ K +GNRWSEI+K LPGRTDN +KN WYS MRRNVR L++EV G P + L
Sbjct: 11 SGDRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHWYSMMRRNVRRLNKEVLDGMPMSAPL 138
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Hypothetical (protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SND5_9STRA) HSP 1 Score: 160 bits (405), Expect = 4.770e-40 Identity = 71/116 (61.21%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 43 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREV 390
+RRVWS EED+AIR LV GT+ W+ I L Y+I GR+GKQCRERWHNHLDP IKK W+ EE + + ++GNRWSEI+K LPGRTDN +KN WYS+MRRNVR L++EV
Sbjct: 42 DRRVWSNEEDEAIRTLVGEQGTKKWSWIATELRQRYNIDGRTGKQCRERWHNHLDPEIKKCPWSESEEQALAEAHQKLGNRWSEISKLLPGRTDNAIKNHWYSTMRRNVRRLTKEV 157
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST59_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.640e-39 Identity = 70/116 (60.34%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 46 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 393
RR WSR+EDDAI LV RHGT+ WA I + L + S V RSGKQCR RW NHLDP+IKK W+ EE +I + +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E+S
Sbjct: 39 RRAWSRKEDDAIVRLVNRHGTKRWAVIAQELNGEISGVFRSGKQCRTRWLNHLDPAIKKEPWSEHEERIIYDAQQRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIS 154
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA) HSP 1 Score: 158 bits (400), Expect = 9.410e-39 Identity = 71/117 (60.68%), Postives = 87/117 (74.36%), Query Frame = 1
Query: 46 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVSG 396
RR WS +ED AIR LV + G ++W+ + + +Y+I GR+ KQ ERWHNHL P I K WTP+EE ++ + AE+GNRWSEIAKRLPGRTDN VKN WYSSMRRNVR L+REV G
Sbjct: 38 RRSWSTKEDAAIRSLVDKLGMQAWSQVAAAMETEYAIFGRTSKQIWERWHNHLSPGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHWYSSMRRNVRRLTREVGG 154
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G8M0_9STRA) HSP 1 Score: 151 bits (381), Expect = 5.150e-38 Identity = 68/116 (58.62%), Postives = 87/116 (75.00%), Query Frame = 1
Query: 46 RRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFWYSSMRRNVRTLSREVS 393
RR W+R+EDDAI LVKRHGT+ WA I + L + V RSGKQCR RW NHLDP+IKK W+ EE +I + +GN+W+EIAK LPGRTDN +KN WYS+MRRN+R L++E++
Sbjct: 50 RRAWTRKEDDAIVRLVKRHGTKRWACIAQELNTEIPGVFRSGKQCRTRWLNHLDPAIKKEPWSDTEEHIIYDAQHRLGNKWAEIAKLLPGRTDNAIKNHWYSTMRRNMRRLAKEIA 165 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig703.15194.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig703.15194.1 >prot_E_fasciculatus_S2_contig703.15194.1 ID=prot_E_fasciculatus_S2_contig703.15194.1|Name=mRNA_E_fasciculatus_S2_contig703.15194.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=453bp ALDGSIASDCRRSENRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYback to top mRNA from alignment at E_fasciculatus_S2_contig703:8064..14958+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig703.15194.1 ID=mRNA_E_fasciculatus_S2_contig703.15194.1|Name=mRNA_E_fasciculatus_S2_contig703.15194.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6895bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig703:8064..14958+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig703:8064..14958+ >mRNA_E_fasciculatus_S2_contig703.15194.1 ID=mRNA_E_fasciculatus_S2_contig703.15194.1|Name=mRNA_E_fasciculatus_S2_contig703.15194.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1359bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig703:8064..14958+ (Ectocarpus fasciculatus EfasUO2)back to top |