mRNA_E_fasciculatus_S2_contig7028.15192.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7028.15192.1
Unique NamemRNA_E_fasciculatus_S2_contig7028.15192.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI)

HSP 1 Score: 650 bits (1677), Expect = 8.600e-224
Identity = 349/436 (80.05%), Postives = 375/436 (86.01%), Query Frame = 1
Query:    1 MAADSGDAAAAAAKLALKMGSAAADTITFMADLGEELPF-------LRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGGRRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            MAA S  AAA   KL LKMGSA  D+ITFMA+LGE+LPF       LRPVLKTL AIRETVE+V NN+EELQ L+RRCVYLTACVV+KSRQSSCSEMD+TP+EECLEAAG +V+RCG RGKM  +L ASSDK EIARMK ++RDLEADLSLAGVAILEGKTSDLTAMV R+G +QAATQE ILANTE+IIDRL KTPAKLA+IPK TPIRKSWHVER +VMERV EALTA GGPHLVGLVGDSGSGKTTA SEIVRSNEVRQAFSDG+VWLT               LAHM+ EE+GGRRPAT+DDGAAYIKE+MQRGHGGKGLKCLV ADNVWE EVVWKLLETGM VLLSTRDE LV    G V+GVDE+SEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVR RSDRTAWSDAAGKV
Sbjct:    1 MAAKSSGAAAEVTKLGLKMGSATVDSITFMAELGEDLPFGEPVLPHLRPVLKTLTAIRETVENVQNNQEELQTLYRRCVYLTACVVVKSRQSSCSEMDLTPVEECLEAAGELVERCGGRGKMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIVRSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEVGGRRPATSDDGAAYIKEKMQRGHGGKGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDEMSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKV 436          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ30_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 7.150e-178
Identity = 298/414 (71.98%), Postives = 327/414 (78.99%), Query Frame = 1
Query:    1 MAADSGDAAAAAAKLALKMGSAAADTITFMADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLTLAHMVYEEIGGRRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            MAA+S  AAA   KLALKMGSA  D+ITF+ADL E+LPF                    N+EELQ L+RRCV+LT CV++KSRQSS SEMDV+P+EECLEAAG +V+RCG RGKM  +L ASSDK +IARMK ++RDLEA+LSLAGVAILEGKTSDL A V R+   QAATQE ILANTE I DRL KTPAK A+IPK TPI KSWHVER  V+ERV E LTADGGP LVGLVGDSGSGKTTA SEIVRSNE R       + L LAHMVYEEIGGRRPAT+DDG AYIKE+M RGHGG+GLKCL   DNVWE EVV +LLE GM VLLSTRDE LVT   G V+ V+ELSEVEAESVLRKA+ELPPETRLPDDAVDLIELCGRVAMDLAF GR STVR RSDRTAWS AA KV
Sbjct:    1 MAAESSGAAAEVTKLALKMGSATVDSITFVADLCEDLPF-------------------ENQEELQTLYRRCVFLTTCVIVKSRQSSFSEMDVSPVEECLEAAGELVERCGGRGKMTRVLNASSDKDQIARMKANIRDLEANLSLAGVAILEGKTSDLRATVERMAKIQAATQEVILANTEIITDRLSKTPAKPAKIPKSTPIWKSWHVERFDVVERVFEPLTADGGPPLVGLVGDSGSGKTTAASEIVRSNEDRLPS----LMLQLAHMVYEEIGGRRPATSDDGTAYIKERMHRGHGGEGLKCLGVVDNVWEKEVVCELLEAGMWVLLSTRDEELVTGWEGEVVEVNELSEVEAESVLRKAAELPPETRLPDDAVDLIELCGRVAMDLAFGGRLSTVRGRSDRTAWSKAASKV 391          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE)

HSP 1 Score: 485 bits (1249), Expect = 2.640e-159
Identity = 269/440 (61.14%), Postives = 318/440 (72.27%), Query Frame = 1
Query:    1 MAADSGDAAAAAAKLALKMGSAAADTITFMADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVA------ILEGKTSDLTAMVV--RLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGG---RRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            MAA   DA    AK+A KMGSAAAD I F+ADLGEELP L+PVL+TL+ IRE VE V  N E+L  LH+RC Y+TAC ++K R    +E+DV PLE+C+ A    V+R  +RGK+  +LKA  DKG+I ++K  +RDLE DLSLAG+A      I + K     A     R+G  Q    E +LA TETI+ +LPK PAK+A +PKGTP  KSWHVER +V E V +AL ADGGPHLVGLVGDSG+GKTTA S IV S  VR+ FSDGIVWL                LA MV+E+IGG   RRP+ +DDG AY+K+Q++ GHGGKGLKCLV ADNVWE++VV +LLETGM +LLSTRDE LV R  G V+GVDELSE EAESVLR+A+EL PE RLPDDA DLIELCGRVAMDLAFVGRWSTVR R DRTAWSDAA KV
Sbjct:    1 MAAYVADATGEVAKIASKMGSAAADVIQFVADLGEELPLLQPVLRTLRIIREKVETVKRNPEDLTVLHQRCTYITACFIVKCRHGY-TELDVAPLEDCVNAVEKFVERYRKRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIVVRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDIGGSVGRRPSGSDDGLAYVKQQVENGHGGKGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDELSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAACKV 439          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE)

HSP 1 Score: 441 bits (1133), Expect = 5.280e-144
Identity = 238/414 (57.49%), Postives = 292/414 (70.53%), Query Frame = 1
Query:   58 GSAAADTITFMADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGG---RRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALV-TRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            G+ A+D + F+ +  + LP + PVLKTLKA+               AL++RC Y+T CV+++ R+ S S +  TPL EC+ A GA V+RC RRG +  +LKA+ DK EIA +K  + DLE DL LAG+A + GK  DL A++  +   QA +    LAN + +  R+  +P  LA +P GTP RKSWHVER HVM  V +AL  +GGP LVGLVGDSGSGKTTA +EIVRS EVR+AFSDGIVWL+               LA +V+E+IGG   RRPA  DDGAAY +++MQ GHGGKGLKCLV ADNVWE  V+ KLLETGM VLLSTRDEALV +   G V+GVDELSE +A SVLR+ASEL PE RLPD+AV+L+ELCGRVAMD+AFVGRWSTVR RSDRTAWSDAA KV
Sbjct:    6 GTMASDVLAFLTEASDGLPLIEPVLKTLKAVXXXXXXXXXXXXXXAALYQRCTYITGCVIVRCRKGS-SGLKATPLMECVNAVGAFVERCSRRGMLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIVRSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDIGGSVGRRPAGLDDGAAYTRQRMQSGHGGKGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKV 418          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI)

HSP 1 Score: 429 bits (1102), Expect = 6.530e-138
Identity = 237/432 (54.86%), Postives = 300/432 (69.44%), Query Frame = 1
Query:    1 MAADSGDAAAAAAKLALKMGSAAADTITFMADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGG---RRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            M AD  D+AA AA+LAL++GS  +D ++   DLGEELP ++PV KTLKAIR TVE V NN+EEL AL +RC Y+TAC V+K R    SE+DV PL++C+EAA    +RC RRGK+  ++KA SDK EIA + + +  L  DL LAG+A+LEGK  D+   + R+               +  ++ LP++  KLA +P G P+RKSWHVER H M  VL+AL       +V L G SGSGKTT  +EIVRS EVR+AFSDGIVWL                LA MV+EEIGG   R P+ ++D A YIK++++ GH G+ LKCLV ADNVWE +VV KL+ETGM VLLSTRDEA+V R RG  + VDELS+ +AESVL++A+ELP E+RLPDDAVDLI+LCGRVAMD+AFVGRWSTVR R D  +WSDAA  +
Sbjct:    1 MVADISDSAAEAARLALEIGSTISDAVSCAVDLGEELPVIKPVFKTLKAIRTTVETVKNNREELAALEQRCTYITACFVVKCRLIE-SEVDVAPLKDCVEAAKNFAERCSRRGKVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRI---------------DQRLESLPRSFGKLAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIVRSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEIGGSVGRVPSASEDSATYIKQRLEEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDELSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTI 416          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE)

HSP 1 Score: 348 bits (893), Expect = 2.290e-111
Identity = 206/385 (53.51%), Postives = 245/385 (63.64%), Query Frame = 1
Query:  148 IRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSC-SEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGGR---RPATTDDGA-AYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            +RETVE V   ++EL AL +RC Y+TAC++ K R +   S  +V+PLE+C+  A   V+R                     R K  M  +  +                          QAA ++ +LAN E IIDRLPK P K A +P+GTP RKSWHVER HV E V+EALT + GP LVGLVGDSG+GKTTA +E+VRSN VR++FSDGIVWLT               LA MV E+IGGR    P  +   A AYIK++M+ GHGGKGLKCL  ADNVWE EVV  LL+TGM+VLLSTR E LVT  RG  + +DELS  +AESVLR A+ELPP  RLPDDAVDLI+LCGRVAMDLAFVGRWSTVR R DR AWSDAA KV
Sbjct:    1 MRETVETVYQTRDELAALEKRCTYMTACIIAKFRHAHPGSAPNVSPLEDCVMEAEKFVER---------------------RKKRTMEQMVQN--------------------------QAAARKELLANQEIIIDRLPKPPIKKAYVPQGTPTRKSWHVER-HVTETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNVVRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDIGGRVGGHPNESGGNADAYIKQRMENGHGGKGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDELSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKV 337          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE)

HSP 1 Score: 320 bits (821), Expect = 2.110e-97
Identity = 173/268 (64.55%), Postives = 202/268 (75.37%), Query Frame = 1
Query:  502 QAATQETILANTETIID---RLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIG---GRRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            QAA+QE IL N   I+D   +L KT AKL ++PKGTP RKSW+V+R HVM+ V E L +DGGP LVGLVG SGSGKTT  SE VRS EV++AFSDGI WL+               LA +VYE+IG   GRRP ++DD AAYI+++M++G GGK LKCLV ADNVWE EVV KLLETGM VLLSTR+  LVT   G V+GVDELSE +A SVLR+A+ELPP+ ++P DAVDLIELCGRVAMDLAFVGRWSTVR R DR AWSDA  KV
Sbjct:    5 QAASQERILENQSKILDHMDQLSKTQAKLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVASESVRSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGCSVGRRPTSSDDCAAYIRQRMKKGTGGKKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDELSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKV 272          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI)

HSP 1 Score: 286 bits (731), Expect = 1.880e-84
Identity = 183/444 (41.22%), Postives = 247/444 (55.63%), Query Frame = 1
Query:   34 AAKLALKMGSAAADTITFMADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIV------------------RSNEVRQAFSDGIVWLT-----------------LAHMVYEEIG---GRRPAT--TDDGAAYIKEQMQ-RGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRVRSDRTAWSDAAGKV 1242
            AA++ LKMGS AAD + F  +LG E+P +  VLKTLKAIR   E V +N E L+AL  RC Y+TACV++K RQ+S SEM+V PLE C+ AA   + RC RRG      KASSD  E+  + + +  L  DL LAG+A L+ K  DL AM+           E I  NT      +P +   +A +P G P+  SWHV R  V++ V E L+    P +VGLVG SGSGKTT  + IV                  R N VR+ F DG+VWL                  LA  V+E++    G  P    T  G+A+I + ++ +G      +CLV AD+VWE +++ +L  TGM VL ++RD  LV R  G+V+ VD+LS+ EAE +LR A+EL   + LP  A  +IE C R+A  L FVGRWSTV+   D   W++A   +
Sbjct:   55 AARVFLKMGSTAADIVMFTEELGGEVPVVGAVLKTLKAIRLRFEAVQSNTERLKALEERCTYVTACVIVKWRQTSSSEMNVAPLESCVNAAEDFIARCSRRGLCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLDAKVDDLKAMLA----------EVIAQNT------MPAS-VPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTGRRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDLKHSYGFAPGASPTGGGSAFISDFVRGKGSAAGRKRCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQLSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAI 481          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5K4_ECTSI)

HSP 1 Score: 265 bits (678), Expect = 7.540e-83
Identity = 161/310 (51.94%), Postives = 207/310 (66.77%), Query Frame = 1
Query:   19 DAAAAAAKLALKMGSAAADTITFM-ADLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQ--SSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVV-RLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRSNEVRQAFSDGIVWLT---------------LAHMVYEEIGG---RRPATTDDGA-AYIKEQM 879
            DAA  AA LALKMGS A D I+F+    G ELP +  VLKTL A+RETVE V  N++EL AL +RC Y+TA V++K RQ     S +DVTPL++C+  A    +RC +R     ++KA S K E+A +   +  L  DL LAG+A + G+ +DL  M++ ++   QAA Q+ +LAN E +IDRLPK P K A IP+GTP+RKSWHVER HVM+ V+EALT + GPHLVGLVGDSG+GKTTA SE+V SN VR++FSDGIVWL                LA MV+E+IGG    RP  + D A AYIK++M
Sbjct:    7 DAAVEAANLALKMGSTAVDMISFVHRGDGGELPVVGTVLKTLTAMRETVETVQQNRDELAALEKRCTYMTASVIVKFRQIPQPGSGLDVTPLKDCVVVAEKFAERCKKRRMRWEIVKAFSVKDELATLNARIDRLVGDLGLAGIATVLGEVADLKGMMLEQMVSDQAAAQKELLANQEIVIDRLPKPPTKKADIPQGTPMRKSWHVERRHVMDTVVEALTGEAGPHLVGLVGDSGAGKTTAASELVGSNVVRESFSDGIVWLAVNYGANKRLPSLMLQLARMVHEDIGGCVGGRPNESGDNADAYIKQRM 316          
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE)

HSP 1 Score: 209 bits (532), Expect = 6.600e-56
Identity = 143/401 (35.66%), Postives = 211/401 (52.62%), Query Frame = 1
Query:   94 DLGEELPFLRPVLKTLKAIRETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLEAAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAILEGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGTPIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIV--RSNEVRQAFSDGIVWL-----------------TLAHMVYEEI--GGRRPATTDDGAAYIKEQMQRGHGGKGLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDELSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVR----VRSDRTAW 1221
            ++G   P + P+   L   +  V+  + NKEEL+ LH RC  +T  V+ K++ S  S +DV PL+EC++    + +R   RG++  + +   D  +I R++  + D+   + L+GV +  G+  D                         I+ RL   P KLA +PK  P  KS+HV R  V++RV + L  DGGP +  L G SG+GKTT+ + +V  R + VR  F DG+VWL                  LA  ++E++  G     T DDG +Y+++ + +    + L+CLV AD+VWE  VV KL ETGM VLL+TR   +       V+  D L   EAE VLR A+ELP   RL D ++ ++E+CGRVAMD AFVG W++VR    V     AW
Sbjct:   32 EIGASAPVVAPLCTALLKAKGVVDAASRNKEELEELHERCEMITIQVIDKAKASKTSTIDVKPLQECVDKLKEVAERYHDRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGV-VNNGEKLDQ------------------------ILARLQPGP-KLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGERGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGAVDAPTGDDGVSYVRKIVSQ----EKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEMGEPEERVVM--DTLIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAW 400          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7028.15192.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
NB-ARC8.600e-22480.05and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
Uncharacterized7.150e-17871.98protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
NB-ARC2.640e-15961.14domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
NB-ARC5.280e-14457.49domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
NB-ARC6.530e-13854.86and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC2.290e-11153.51domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC2.110e-9764.55domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
NB-ARC1.880e-8441.22and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
Uncharacterized7.540e-8351.94protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
NB-ARC6.600e-5635.66domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7028contigE_fasciculatus_S2_contig7028:2811..4786 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score654.4
Seed ortholog evalue3.4e-185
Seed eggNOG ortholog2880.D7FZY7
Model size1242
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons3
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759
Ec32 ortholog descriptionNB-ARC and TPR repeat-containing protein - likely pseudogene
Ec32 orthologEc-22_003590.1
Cds size1242
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842363.216884-CDS-E_fasciculatus_S2_contig7028:2810..32571696842363.216884-CDS-E_fasciculatus_S2_contig7028:2810..3257Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7028 2811..3257 -
1696842363.2312016-CDS-E_fasciculatus_S2_contig7028:3302..35991696842363.2312016-CDS-E_fasciculatus_S2_contig7028:3302..3599Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7028 3303..3599 -
1696842363.2420232-CDS-E_fasciculatus_S2_contig7028:4288..47861696842363.2420232-CDS-E_fasciculatus_S2_contig7028:4288..4786Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7028 4289..4786 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7028.15192.1prot_E_fasciculatus_S2_contig7028.15192.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7028 2811..4786 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7028.15192.1

>prot_E_fasciculatus_S2_contig7028.15192.1 ID=prot_E_fasciculatus_S2_contig7028.15192.1|Name=mRNA_E_fasciculatus_S2_contig7028.15192.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=414bp
MAADSGDAAAAAAKLALKMGSAAADTITFMADLGEELPFLRPVLKTLKAI
RETVEDVTNNKEELQALHRRCVYLTACVVMKSRQSSCSEMDVTPLEECLE
AAGAIVKRCGRRGKMKGMLKASSDKGEIARMKTDMRDLEADLSLAGVAIL
EGKTSDLTAMVVRLGCSQAATQETILANTETIIDRLPKTPAKLARIPKGT
PIRKSWHVERAHVMERVLEALTADGGPHLVGLVGDSGSGKTTATSEIVRS
NEVRQAFSDGIVWLTLAHMVYEEIGGRRPATTDDGAAYIKEQMQRGHGGK
GLKCLVAADNVWETEVVWKLLETGMSVLLSTRDEALVTRRRGTVIGVDEL
SEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRV
RSDRTAWSDAAGKV
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mRNA from alignment at E_fasciculatus_S2_contig7028:2811..4786-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7028.15192.1 ID=mRNA_E_fasciculatus_S2_contig7028.15192.1|Name=mRNA_E_fasciculatus_S2_contig7028.15192.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1976bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7028:2811..4786- (Ectocarpus fasciculatus EfasUO2)
ATGGCGGCCGACTCAGGCGATGCCGCAGCGGCGGCGGCCAAGCTCGCCCT CAAGATGGGATCGGCCGCGGCGGATACGATCACGTTTATGGCGGACTTGG GCGAGGAGCTTCCCTTTCTTCGACCCGTGTTGAAGACGCTCAAAGCTATT CGTGAGACTGTAGAGGACGTGACGAACAATAAGGAGGAGCTCCAGGCGTT GCATCGGAGGTGCGTGTACTTGACGGCATGCGTGGTCATGAAAAGTAGAC AGAGCTCCTGCTCGGAGATGGACGTGACTCCGCTCGAGGAGTGCCTGGAA GCAGCGGGGGCAATCGTGAAGCGTTGTGGTAGGCGAGGCAAGATGAAGGG GATGCTGAAGGCCTCAAGCGACAAGGGTGAGATCGCCCGCATGAAGACAG ACATGAGAGACCTGGAGGCCGACTTGAGCCTGGCGGGTGTTGCCATCCTG GAGGGAAAGACCAGCGACTTGACGGCGATGGTGGTGAGGCTTGGTTGTGT TGGCTCGCGGGGTGTCTCTTTCTTTAGTTGTCATGCGTCTCCCCAGGGTG ATACTTTATCATCCTAAATCGCGATGTTGCATCACTGGGAAGCAAGACTA CCGCGAGTTCTTGGGGGTCGAACACGCCCTTTTTATCGGGCGTTTGTATG AAAAAATTAGTATATTCAATCTCTCCTTTTCGTCGCCCCCTCCGGGTGGT GTTCCTCCCCCCCACCCCCCCCCTTTTTGACCCCCAAAAATGAGAACTTG ATTTGTCCCCGGGAACAGGCAAAACCATCATCGACAAACGTCTTCCTGCC ATCAATTTTCTCCCAGGGGGGAGGGTTTGAGAGCACCACCTTTTCCTTTC GGAGGGAGGAAGCAAAGCTCAGTTCTCCCCAAAGTTGTTGTTGGCCCTTA ACATCGCGTGTTGACCATGGTTCTGCCTTGCCCACCATATGTAGCACCGT GCCTTGAGGAGACTGGGGAGAGTGACATTGTAAACGCGGAAACCATGTCT AGCCTATTGTCTCCTACCGCGAACTTGCTTTTTTCCTTGCCTGTGTATCA GTGTATTTGATCTTAAAATGCTGCAGACCCCCAACAGCCGTGGTGATCCC TTCTGACGTGTTCAAGTGTCAGTATCTCATGTGTACCCCTTGGACGTGTT TTCCTGCACCATGCGTTGCCAGGAGTGCATGCGCAAGAGCCAAGCAGCAA CTCAAGAAACGATCCTGGCAAATACGGAAACCATTATTGACCGGCTACCC AAGACACCGGCCAAGCTGGCCAGAATTCCCAAGGGGACACCGATTCGTAA GAGCTGGCATGTCGAACGTGCCCATGTAATGGAAAGGGTGTTGGAGGCGC TCACTGCCGATGGAGGACCGCACTTGGTGGGGCTTGTGGGCGACAGCGGG TCGGGCAAGACCACGGCCACGTCCGAGATCGTCAGGAGTAACGAGGTGCG GCAGGCTTTCTCCGACGGTATCGTGTGGTTGACGGTGAATCATGGTGCAA TGGTTCGCCTCCCGTCCTTGATGCTGCAGCTAGCCCATATGGTGTATGAA GAAATCGGCGGTCGTCGTCCAGCGACAACGGATGACGGGGCGGCCTACAT CAAGGAGCAAATGCAGCGCGGCCACGGAGGCAAGGGGTTGAAATGCCTGG TAGCGGCAGACAACGTGTGGGAGACGGAGGTAGTCTGGAAGCTGCTGGAG ACGGGAATGTCGGTTCTTCTGTCGACCCGCGACGAAGCACTGGTTACACG CCGGAGGGGAACGGTTATCGGAGTGGACGAGCTGTCCGAAGTAGAAGCGG AGTCGGTGCTGAGGAAGGCATCGGAGCTACCCCCCGAGACGCGCTTGCCC GACGACGCCGTTGATCTGATCGAGCTGTGTGGGCGCGTGGCGATGGACCT GGCATTCGTTGGGCGCTGGAGCACCGTTCGGGTCAGGTCAGACCGGACGG CTTGGTCAGATGCTGCCGGCAAGGTC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7028:2811..4786-

>mRNA_E_fasciculatus_S2_contig7028.15192.1 ID=mRNA_E_fasciculatus_S2_contig7028.15192.1|Name=mRNA_E_fasciculatus_S2_contig7028.15192.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1242bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7028:2811..4786- (Ectocarpus fasciculatus EfasUO2)
ATGGCGGCCGACTCAGGCGATGCCGCAGCGGCGGCGGCCAAGCTCGCCCT
CAAGATGGGATCGGCCGCGGCGGATACGATCACGTTTATGGCGGACTTGG
GCGAGGAGCTTCCCTTTCTTCGACCCGTGTTGAAGACGCTCAAAGCTATT
CGTGAGACTGTAGAGGACGTGACGAACAATAAGGAGGAGCTCCAGGCGTT
GCATCGGAGGTGCGTGTACTTGACGGCATGCGTGGTCATGAAAAGTAGAC
AGAGCTCCTGCTCGGAGATGGACGTGACTCCGCTCGAGGAGTGCCTGGAA
GCAGCGGGGGCAATCGTGAAGCGTTGTGGTAGGCGAGGCAAGATGAAGGG
GATGCTGAAGGCCTCAAGCGACAAGGGTGAGATCGCCCGCATGAAGACAG
ACATGAGAGACCTGGAGGCCGACTTGAGCCTGGCGGGTGTTGCCATCCTG
GAGGGAAAGACCAGCGACTTGACGGCGATGGTGGTGAGGCTTGGTTGTAG
CCAAGCAGCAACTCAAGAAACGATCCTGGCAAATACGGAAACCATTATTG
ACCGGCTACCCAAGACACCGGCCAAGCTGGCCAGAATTCCCAAGGGGACA
CCGATTCGTAAGAGCTGGCATGTCGAACGTGCCCATGTAATGGAAAGGGT
GTTGGAGGCGCTCACTGCCGATGGAGGACCGCACTTGGTGGGGCTTGTGG
GCGACAGCGGGTCGGGCAAGACCACGGCCACGTCCGAGATCGTCAGGAGT
AACGAGGTGCGGCAGGCTTTCTCCGACGGTATCGTGTGGTTGACGCTAGC
CCATATGGTGTATGAAGAAATCGGCGGTCGTCGTCCAGCGACAACGGATG
ACGGGGCGGCCTACATCAAGGAGCAAATGCAGCGCGGCCACGGAGGCAAG
GGGTTGAAATGCCTGGTAGCGGCAGACAACGTGTGGGAGACGGAGGTAGT
CTGGAAGCTGCTGGAGACGGGAATGTCGGTTCTTCTGTCGACCCGCGACG
AAGCACTGGTTACACGCCGGAGGGGAACGGTTATCGGAGTGGACGAGCTG
TCCGAAGTAGAAGCGGAGTCGGTGCTGAGGAAGGCATCGGAGCTACCCCC
CGAGACGCGCTTGCCCGACGACGCCGTTGATCTGATCGAGCTGTGTGGGC
GCGTGGCGATGGACCTGGCATTCGTTGGGCGCTGGAGCACCGTTCGGGTC
AGGTCAGACCGGACGGCTTGGTCAGATGCTGCCGGCAAGGTC
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