mRNA_E_fasciculatus_S2_contig7010.15172.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7010.15172.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJW3_ECTSI) HSP 1 Score: 763 bits (1971), Expect = 8.320e-273 Identity = 408/503 (81.11%), Postives = 440/503 (87.48%), Query Frame = 1
Query: 352 MKEVLRSTRAVDSILDTDRFKDRKLTYWHGMKIMKTIKHRIDNISVSVVHNQCHSCIDIAERHIREPDPTTANVEAGLDTPGPASDEATMASPEEVAIVFDMFHSVPEVTGLDSIYKKQLFRELRLKHFAAGSTIFRQWEHQNQICLVLRGRVQLTSKHSGVLFQAGTCDVGEARMCGTVIGGIEPIVGMLTARCEDDTTVLCLGSDRFAAVVNDSVSAERVAKKAFLKCSTVFSTLDDDDLNTVETLFTTATLHDNQVLCKEGSRVDHVYVVKRGFLRVLKAFLPQEDXXXXXXXXSHASTVTAGATSARRSSSADVETRLKHFDLGEVGPKDMLGENGVLQHLDTSSAFSTTPAPAATETVTLPAIVSNQEDAQRLSRPTETPGDTTDHGASTPDGDAGDPRPPSADAAADRAGSSRVSAMGPRKPAFIASAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTARRLHQARAQAWGVGALAQQLRGQNEWEARKREVLSQI 1860
M EVLR TRAV+SILDT+RFKDRK+T+WHGM I KT K+RIDNI V ++ N+C SCIDIAERHIRE D TT + EA LDTPG +SDEATMASPEEVAIVFDMF+SVPEVT LDSIYKKQLFRE +L+HFAAGSTIFRQWEHQ++IC++LRGRV LTSKHSGVLFQAGTC+VGE VIG IEPIVGMLTARCE TTVLCLGSD FAAVVNDSV AERVAKKAFLKCS VFSTL+DDDLNTVETLFTT TLHDNQV+CKEGSRVDHVYVVKRGFLR+LKAFLP+E XXXXXXXX SADVETRLKHFDLGE+GPKDMLGENG+L+HLDTSSAFSTTP PAATETV LPAI S+QEDAQ LS+PTETPGDTTDHGASTPD D GD PPSADAA DRAGSSRV+ +GPRKPA+I SAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTA+RLHQARAQAWGV ALAQQLR QNEW+ARKR VLSQI
Sbjct: 1 MTEVLRGTRAVESILDTERFKDRKMTFWHGMVIKKTSKYRIDNIGVEMLPNRCRSCIDIAERHIRESDATTTSGEADLDTPGSSSDEATMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFREFQLRHFAAGSTIFRQWEHQDKICVILRGRVHLTSKHSGVLFQAGTCNVGE------VIGSIEPIVGMLTARCEAYTTVLCLGSDSFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTTVTLHDNQVICKEGSRVDHVYVVKRGFLRILKAFLPEEXXXXXXXXXXXXXXXXXXXXXXXXXXSADVETRLKHFDLGEIGPKDMLGENGMLKHLDTSSAFSTTPPPAATETVALPAIASSQEDAQHLSQPTETPGDTTDHGASTPDWDTGDASPPSADAATDRAGSSRVATIGPRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTAQRLHQARAQAWGVEALAQQLRRQNEWDARKRGVLSQI 497
BLAST of mRNA_E_fasciculatus_S2_contig7010.15172.1 vs.
Match: Cyclic (nucleotide-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV6_9PHAE) HSP 1 Score: 696 bits (1795), Expect = 1.230e-246 Identity = 375/501 (74.85%), Postives = 402/501 (80.24%), Query Frame = 1
Query: 358 EVLRSTRAVDSILDTDRFKDRKLTYWHGMKIMKTIKHRIDNISVSVVHNQCHSCIDIAERHIREPDPTTANVEAGLDTPGPASDEATMASPEEVAIVFDMFHSVPEVTGLDSIYKKQLFRELRLKHFAAGSTIFRQWEHQNQICLVLRGRVQLTSKHSGVLFQAGTCDVGEARMCGTVIGGIEPIVGMLTARCEDDTTVLCLGSDRFAAVVNDSVSAERVAKKAFLKCSTVFSTLDDDDLNTVETLFTTATLHDNQVLCKEGSRVDHVYVVKRGFLRVLKAFLPQEDXXXXXXXXSHASTVTAGATSARRSSSADVETRLKHFDLGEVGPKDMLGENGVLQHLDTSSAFSTTPAPAATETVTLPAIVSNQEDAQRLSRPTETPGDTTDHGASTPDGDAGDPRPPSADAAADRAGSSRVSAMGPRKPAFIASAAASGGTAEVYVANVYDLKKLQTDSFRYCWKTARRLHQARAQAWGVGALAQQLRGQNEWEARKREVLSQI 1860
+VLR TRAVDSILDTDRFKDRKLT+WHGM I KT KHRIDNI V ++ +QC SCI+I +RHIRE DP DTPG +SDE TMASPEEVAIVFDMF+SVPEVT LDSIYKKQLFRELRLKHFA GSTIFRQWEHQN+ VIG I+PIVGMLTARCE TTVLCLGSDRFAAVVNDSV AERVAKKAFLKCS VFSTL+DDDLNTVETLFT TLHDNQV+C EGSRVDHVYVVKRGFLR+LKAFLP+ED SHASTV AGA SARRSS ADVETRLK+FDLGE+GPKDMLGENG+L+HLDTS STTPAPAATE+VTLPAI S+QEDAQ LS+PT+ DT DHGAST DGDAGD PPSADAA D AGS RV+ MG RKPA+I SAAASGGTAEVYVANVYDLKKLQTDSF YCWKTA+RLHQARAQAWG GALAQQLR +NEWEARK EVLSQI
Sbjct: 5 QVLRGTRAVDSILDTDRFKDRKLTFWHGMMIKKTFKHRIDNIGVGILPDQCRSCINIVQRHIREADP---------DTPGSSSDETTMASPEEVAIVFDMFNSVPEVTSLDSIYKKQLFRELRLKHFATGSTIFRQWEHQNK-----------------------------------VIGSIKPIVGMLTARCETYTTVLCLGSDRFAAVVNDSVCAERVAKKAFLKCSAVFSTLNDDDLNTVETLFTAITLHDNQVICMEGSRVDHVYVVKRGFLRILKAFLPEEDADCRSGPPSHASTVAAGAASARRSSLADVETRLKYFDLGEIGPKDMLGENGMLKHLDTSLVLSTTPAPAATESVTLPAIASSQEDAQHLSQPTDARADTIDHGASTLDGDAGDASPPSADAATDGAGSPRVATMGLRKPAYIISAAASGGTAEVYVANVYDLKKLQTDSFCYCWKTAQRLHQARAQAWGAGALAQQLRRRNEWEARKGEVLSQI 461
BLAST of mRNA_E_fasciculatus_S2_contig7010.15172.1 vs.
Match: cAMP-dependent (protein kinase regulatory subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBQ9_ECTSI) HSP 1 Score: 113 bits (282), Expect = 1.220e-22 Identity = 70/197 (35.53%), Postives = 107/197 (54.31%), Query Frame = 1
Query: 631 EEVAIVFDMFHSVPEVTGLDSIYKKQLFRELRLKHFAAGSTIFRQWEHQNQICLVLRGRVQLTSKHS-GVLFQAGTCDVGEARMCGTVIGGIEPIVGMLTARCEDDTTVLCLGSDRFAAVVNDSVSAERVAKKAFLKCSTVFSTLDDDDLNTVETLFTTATLHDNQVLCKEGSRVDHVYVVKRGFLRVLKAFLPQED 1218
E VFD+ +VP + LD +++++L L L + G +FRQ + Q + L+L GR+ + S GV+ G + G VIG I P + TA C + T+L L F +ND + V KK F + ++F L + DL+ + ++F TL VLC+EG RVD++Y+V+RG LR+LKAF+P D
Sbjct: 47 ENCRCVFDLLGAVPLIGSLDPVFRRKLLWMLDLANRQEGQILFRQGDKQETLWLILDGRIGVRSTDKQGVVHYTGEFNSGH------VIGSILPEKRLATAICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 237
BLAST of mRNA_E_fasciculatus_S2_contig7010.15172.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUG7_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 4.570e-18 Identity = 70/233 (30.04%), Postives = 110/233 (47.21%), Query Frame = 1
Query: 631 EEVAIVFDMFHSVPEVTGLDSIYKKQLFRELRLKHFAAGSTIFRQWEHQNQICLVLRGRVQLTSKHS-GVLFQAGTCD--------------------VGEARMCGT----------------VIGGIEPIVGMLTARCEDDTTVLCLGSDRFAAVVNDSVSAERVAKKAFLKCSTVFSTLDDDDLNTVETLFTTATLHDNQVLCKEGSRVDHVYVVKRGFLRVLKAFLPQED 1218
E VFD+ +VP + LD +++++L L L + G +FRQ + Q + L+L GR+ + S GV+ G + VG + G+ V+G I P + T C + T+L L F +ND + V KK F + ++F L + DL+ + ++F TL VLC+EG RVD++Y+V+RG LR+LKAF+P D
Sbjct: 47 ENCRCVFDLLGAVPLIRSLDPVFRRRLLWMLDLANRQEGQILFRQGDKQEALWLILDGRIGVRSTDKQGVVHHTGEFNSGHVENLNRVVRVWRADHGFVGWSERVGSTDGKSPQLSQTPPSTQVVGSILPEKRLATVICLEQCTLLQLDRATFLQALNDPEAQRAVVKKNFFRSVSLFKGLGERDLDRLVSVFHHTTLEAGDVLCREGERVDYLYLVQRGNLRLLKAFVPLPD 279 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7010.15172.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7010.15172.1 >prot_E_fasciculatus_S2_contig7010.15172.1 ID=prot_E_fasciculatus_S2_contig7010.15172.1|Name=mRNA_E_fasciculatus_S2_contig7010.15172.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=621bp MLGNRVPSAGDAADVPTKRVSRGEPQAPTVRRSTGGDTHRQSFALRKSTVback to top mRNA from alignment at E_fasciculatus_S2_contig7010:1128..4496+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7010.15172.1 ID=mRNA_E_fasciculatus_S2_contig7010.15172.1|Name=mRNA_E_fasciculatus_S2_contig7010.15172.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3369bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7010:1128..4496+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7010:1128..4496+ >mRNA_E_fasciculatus_S2_contig7010.15172.1 ID=mRNA_E_fasciculatus_S2_contig7010.15172.1|Name=mRNA_E_fasciculatus_S2_contig7010.15172.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1863bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7010:1128..4496+ (Ectocarpus fasciculatus EfasUO2)back to top |