mRNA_E_fasciculatus_S2_contig6992.15131.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0N3_ECTSI) HSP 1 Score: 305 bits (780), Expect = 8.420e-101 Identity = 147/162 (90.74%), Postives = 151/162 (93.21%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWLTWP 486
RD+SLENIVL V GEVKIIDFGLAL SGQHRPQ R AQFDG N FNARSISPTGPFGKKHYMPPEVAMNE+DY+GFAVDVWALGVVMFITLAGIPPFHIPIP RDHRC VIAVERRLLEVVR WGLTMSDEAVSLIQACLLF+PSERSTVRDLQNHPWL WP
Sbjct: 183 RDVSLENIVLAVTGEVKIIDFGLALRSGQHRPQGRMAQFDGDNQFNARSISPTGPFGKKHYMPPEVAMNEEDYNGFAVDVWALGVVMFITLAGIPPFHIPIPARDHRCHVIAVERRLLEVVRRWGLTMSDEAVSLIQACLLFDPSERSTVRDLQNHPWLMWP 344
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA5_9PHAE) HSP 1 Score: 210 bits (534), Expect = 5.900e-64 Identity = 105/131 (80.15%), Postives = 112/131 (85.50%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDE 393
RD+SLENIVL V+GEVKIIDFGLAL SGQHRPQ RTAQFDG N + RSISPTG FGKK+Y MNE+DY+GFAVDVWALGVV+FITLAGIPPFHIPIP RDHRC IAVER LLEVVR WGLTMSDE
Sbjct: 189 RDVSLENIVLTVSGEVKIIDFGLALRSGQHRPQGRTAQFDGDNQLDVRSISPTGHFGKKNYT-----MNEEDYNGFAVDVWALGVVIFITLAGIPPFHIPIPARDHRCHTIAVERGLLEVVRRWGLTMSDE 314
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: SOS2 ((SALT OVERLY SENSITIVE 2) kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTS8_ECTSI) HSP 1 Score: 154 bits (388), Expect = 2.060e-41 Identity = 76/161 (47.20%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNE--QDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWL 477
RD+SLEN++LD VK++DFGLAL Q +P DG AR + P GP GK Y+ PEV + +DGFAVDVWA GV++F+ L G+PPF + +P +D RCQ++AVE RL++++ WG+++S EA LIQ+CL +P+ER +V +L HPW+
Sbjct: 232 RDVSLENLLLDEGNTVKLVDFGLALRIPQ-KP-------DGG----ARVLLPQGPCGKPFYIAPEVLSSSVSSGFDGFAVDVWACGVLLFVMLTGVPPFEMALPSQDQRCQIVAVEERLVDLLSAWGISLSPEAAGLIQSCLRHSPAERPSVENLLRHPWM 380
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Serine/threonine (protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLV2_ECTSI) HSP 1 Score: 142 bits (358), Expect = 4.450e-37 Identity = 72/162 (44.44%), Postives = 100/162 (61.73%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEV---AMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWL 477
RD+SLEN+VL G VK++DFGLAL Q+ DG AR+I P G GK HY+ PEV + ++ +DGFAVDVWA G+++F+ L G+ PF + +P D R +AV+ L E++ W +++S EA LIQ+CLLF P R ++ L NH WL
Sbjct: 224 RDVSLENLVLTEEGVVKLVDFGLALRIPQNE--------DG----RARTIPPQGVCGKPHYIAPEVLASSSSKSGFDGFAVDVWASGILLFVMLTGVAPFEVALPSHDERLHTVAVKENLAELLSTWNISLSPEATDLIQSCLLFAPERRPSLEALANHDWL 373
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKI7_9PHAE) HSP 1 Score: 138 bits (347), Expect = 7.710e-37 Identity = 69/161 (42.86%), Postives = 99/161 (61.49%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEV--AMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWL 477
RD+SLEN++L G +K++DFGLAL Q+ DG+ AR+I P G GK HY+ PEV + ++ +DGFAVDVWA G+++F+ L G+ PF + +P D R +AV L E++ W +++S EA LIQ+CLLF P R ++ L NH W
Sbjct: 87 RDVSLENLMLTDEGVLKLVDFGLALRIPQNE--------DGS----ARTIPPQGACGKPHYIAPEVLASSSKSGFDGFAVDVWACGILLFVMLTGVAPFEVALPFHDERLHTVAVNENLAELLSTWNISLSPEATDLIQSCLLFAPERRPSLEALANHDWF 235
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K2Q5_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.670e-33 Identity = 70/161 (43.48%), Postives = 98/161 (60.87%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQD--YDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWL 477
RD+SLEN++ G VK++DFGLAL PQ+ DG+ AR I P GP GK +YM PEV + +DGFAVDVWA G+++F L G+ PF + +P +D R +AV RL E++ W + +S EA LIQ+CLL P R ++ +L +H W+
Sbjct: 329 RDVSLENLLFAEEGVVKLVDFGLALRI----PQSE----DGS----ARIIPPQGPCGKPYYMAPEVVASSTSSGFDGFAVDVWACGILVFAMLTGVAPFELALPSQDMRFHTVAVRERLTELLSAWNMPLSPEATDLIQSCLLLAPERRPSLEELVDHDWV 477
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RKJ1_9STRA) HSP 1 Score: 120 bits (302), Expect = 5.850e-29 Identity = 65/162 (40.12%), Postives = 97/162 (59.88%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWLTWP 486
RD+SLEN+++D V +ID G+ L P++ A+ D A R + P G GK YM PE N+ +DGFA+D+WA GV+++I L G PP+ P +D R ++I V +L+E ++ W +TMS A L+Q+ L F+P ER T+ + HPW+T P
Sbjct: 206 RDLSLENVLVDDQNCV-VIDMGMCLRVPYTDPKSEQARADVALGTMRRLMRPQGVCGKMQYMSPETYKNDDSFDGFAIDLWAAGVILYIMLTGFPPYDHP-SIKDQRFEII-VTGQLVEQLQNWDITMSKNAGDLLQSMLRFHPRERLTLAQVIEHPWITDP 364
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Hypothetical (protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PX35_9STRA) HSP 1 Score: 117 bits (294), Expect = 2.960e-27 Identity = 64/166 (38.55%), Postives = 101/166 (60.84%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALM---SGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPF-HIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWLTWP 486
RD+SLENI++D N + +IDFG+ L S Q+ Q G R + P G GK +YM PE+ N++ +DGF++D+WA GV+++I L G PP+ H + D R +VI VE +++E +++W + +SDEA L+Q+ L +R ++ + NHPW+T P
Sbjct: 299 RDLSLENILVDENNCL-VIDFGMCLRIPYSSQNTNQVVDVDLGGIR----RLMKPMGTCGKHNYMSPEIFQNKESFDGFSIDLWAAGVILYIMLTGFPPYDHATLA--DQRFEVI-VEGQMMEQLKMWEIELSDEAGDLLQSMLQLRAKDRLSLGQVMNHPWVTNP 456
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JI50_9STRA) HSP 1 Score: 111 bits (278), Expect = 8.880e-27 Identity = 61/159 (38.36%), Postives = 92/159 (57.86%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPWL 477
RD+SLENI++D + +ID G+ L P + D ++ R I P G GK +YM PE+ N +D+DGFA+D+WA GV+++I L G PP+ D R ++I V L+E + W + +S EA L+Q+ L +P ER T+ + NHPW+
Sbjct: 47 RDLSLENILVDETNCL-VIDMGMCLRVPYSCPVNTGSVVDVSSGTMRRLIRPQGVCGKHNYMSPEIFRNAEDFDGFAIDLWAAGVILYIMLTGFPPYD-QASLADQRFEII-VNGSLVEQLENWDIILSQEAGHLMQSMLHLDPRERVTLAQIMNHPWV 202
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Match: Protein (kinase domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BR32_THAPS) HSP 1 Score: 112 bits (279), Expect = 1.200e-26 Identity = 59/158 (37.34%), Postives = 94/158 (59.49%), Query Frame = 1
Query: 1 RDMSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPTGPFGKKHYMPPEVAMNEQDYDGFAVDVWALGVVMFITLAGIPPFHIPIPERDHRCQVIAVERRLLEVVRLWGLTMSDEAVSLIQACLLFNPSERSTVRDLQNHPW 474
RD+SLENI++D N + +ID G+ L + P + +D + + I P G GK +Y+ PEV +N + +DGFAVD+WA G+V+FI L G+PPF + D R +++ L ++++ W +S A L+Q L +P++R T+ D+ NHPW
Sbjct: 90 RDISLENILVDQNTKALVIDMGMCLRVPFNSPTGCESVYDSSAGTLRKLIYPAGQCGKPNYISPEVLLNNEPFDGFAVDLWAAGIVLFIMLIGLPPFEWASND-DPRYRLVC-RGGLGQLIQQWHRQISPLAADLLQKMLREHPTDRLTLFDVMNHPW 245 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6992.15131.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6992.15131.1 >prot_E_fasciculatus_S2_contig6992.15131.1 ID=prot_E_fasciculatus_S2_contig6992.15131.1|Name=mRNA_E_fasciculatus_S2_contig6992.15131.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=161bp MSLENIVLDVNGEVKIIDFGLALMSGQHRPQARTAQFDGANPFNARSISPback to top mRNA from alignment at E_fasciculatus_S2_contig6992:5728..7920- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6992.15131.1 ID=mRNA_E_fasciculatus_S2_contig6992.15131.1|Name=mRNA_E_fasciculatus_S2_contig6992.15131.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2193bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6992:5728..7920- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6992:5728..7920- >mRNA_E_fasciculatus_S2_contig6992.15131.1 ID=mRNA_E_fasciculatus_S2_contig6992.15131.1|Name=mRNA_E_fasciculatus_S2_contig6992.15131.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=483bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6992:5728..7920- (Ectocarpus fasciculatus EfasUO2)back to top |