mRNA_E_fasciculatus_S2_contig6877.15007.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGF5_9PHAE) HSP 1 Score: 683 bits (1762), Expect = 1.460e-246 Identity = 335/357 (93.84%), Postives = 342/357 (95.80%), Query Frame = 1
Query: 43 MRCSVFLACIALTPGVAFHPNHQARLRMQQGFGKQTQSKTPAKLKTXXXAPPPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVRRFAEAGVR 1113
MRCSV LAC+ALTPGVAF+PN+QARLRMQQGFGKQ++S TPAKLKT AP PAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAP GKAT FPVEV DRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRR+G LAPTELQSATTSSQ QQ TSTTWFHHYASAPELVAKASLLLGVDDY KWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY RRFAEAGV+
Sbjct: 1 MRCSVLLACVALTPGVAFNPNNQARLRMQQGFGKQSRSNTPAKLKTPAKAPYPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQKAPAGKATAFPVEVADRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRKGGLAPTELQSATTSSQCQQXXTSTTWFHHYASAPELVAKASLLLGVDDYSKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYARRFAEAGVK 357
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0Y5_9PHAE) HSP 1 Score: 253 bits (645), Expect = 1.050e-74 Identity = 159/402 (39.55%), Postives = 204/402 (50.75%), Query Frame = 1
Query: 139 GKQTQSKTPAKLKTXXXAPPPAVPKQTPVRAGELPEDAFSQFPPLTPEQKQTLQ-------------KAPGGKATDFPVEVVDRIRERHGFEHF-------------------------------------------------------DEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST----------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
G+ Q P + T A A P T R G+LP+D F+ FPPL+P+ +++ + G+ P +V++ IR RHG E F LFPG+RLLHA+P V V FFT +ECD YI+ S P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ ASKGGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW ++ Y P+VP+ + HE A + ++
Sbjct: 173 GESQQQLQPERQPTARLA---AAPAATAARGGQLPDDDFATFPPLSPDTLKSIMGVDVFDLPAGGIPASERGQQEALPPQVLECIRGRHGLEEFAGGRRLLDPEYFGADGEAGDAALTGSXXXXXXXXXXXXXXXXXXXXXGGDGTAAKSRLLFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXXXXXXXGPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASKGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRERRYTPTVPKQNRHEHAASAVAEF 570
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1H9_ECTSI) HSP 1 Score: 237 bits (604), Expect = 3.310e-71 Identity = 131/247 (53.04%), Postives = 161/247 (65.18%), Query Frame = 1
Query: 391 LFPGIRLLHADPVVFEVEGFFTPQECDAYIAMST-------------LKKSGRRRGSLAPTELQSATTSSQFQQ--QRTSTTWFHHYASAPELVAKASLLLGVD-DYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGPLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
LFPG+RLLHA+P V V FFT +ECD YI+ S GS P +SAT + QRTSTTWFH +++ PEL+AKAS L+GV + +WEE QTVRYRPGE+F WHLDALPP+ AS+GGQR AT+LVYLT M GGATAFRDLGPLRVRP+KG L+FFPS GG PFD R LHAGEVV G + ++K+IAQLW + Y P+VP+ + HE A + ++
Sbjct: 100 LFPGLRLLHAEPPVIGVSDFFTDEECDEYISRSVSPPXXXXXXXXXXXXXXXXXXGS-GPHMQRSATLGADVDAVAQRTSTTWFHRFSAVPELMAKASALVGVPFEEGRWEEAQTVRYRPGEKFTWHLDALPPAPDLASRGGQRIATLLVYLTEMPEGDGGATAFRDLGPLRVRPRKGSALLFFPSLGGAPDCPFDIRTLHAGEVVRPGAE-QDKWIAQLWLRESRYTPTVPKQNRHEHAAAVVAEF 344
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KCF3_9STRA) HSP 1 Score: 239 bits (611), Expect = 3.570e-71 Identity = 132/264 (50.00%), Postives = 168/264 (63.64%), Query Frame = 1
Query: 310 GGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTSSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLGP-----LRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYV 1086
G AT P+ VD + + F+ F R+LH DP+V V+ FFT +ECD YIAMS +G + G T + + + QRTSTTWFHHY + PEL+AK+S L G+DD +EEPQTVRY+P ++F WHLDAL P SKGGQRTAT+LVYLT++ GGAT FRDLGP L+V+PKKG L+FFP+ GG +PFD R LHAGEVV K+ +K+IAQLW + Y P+VP + H AA +PI YV
Sbjct: 183 GFSATATPMATVD-VSKLPPFDKF--------RVLHIDPLVIAVDDFFTHEECDKYIAMSD-PTAGNKDGDAVMTRSMTVGKDAAAKSQRTSTTWFHHYKNVPELMAKSSRLFGLDDIGVFEEPQTVRYQPDQKFTWHLDALAPGSENISKGGQRTATLLVYLTDLGPEDGGATTFRDLGPAEGEPLKVQPKKGSALLFFPAAGGIPNTPFDIRTLHAGEVVSADCKS-DKWIAQLWLREDSYEPTVPPENVHAAATEPISQYV 435
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAB3_9STRA) HSP 1 Score: 233 bits (594), Expect = 3.400e-68 Identity = 127/245 (51.84%), Postives = 159/245 (64.90%), Query Frame = 1
Query: 388 KLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLK----KSGRRRGS-LAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
K F R+LH DP+V V+ FFTP+ECDA IA ST + + G+ L P ++ + T S+ + QRTSTTWFHHYA PEL+AKA L+G++D +EEPQTVRYR E F WHLDAL P+ A KGGQR AT+LVYLT++ GGAT FRDLG PL+VRPKKG L+FFP+ GG P D R LH GE V + ++K+IAQLW + PY P+ P G+SH +A PI DY
Sbjct: 233 KPFSKFRVLHVDPMVLCVDDFFTPEECDALIARSTTTVITADNNEKEGTTLLPMKIGQSKTVGKDSRARAQRTSTTWFHHYAGVPELMAKACRLMGINDISAFEEPQTVRYRRTEHFTWHLDALAPTPELADKGGQRCATLLVYLTDLSEKDGGATMFRDLGGSDGEPLKVRPKKGSALLFFPAAGGIPSVPLDLRTLHCGEAVAS-DAEQDKWIAQLWLRETPYTPTAPPGNSHASASSPISDY 476
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SVE6_THAOC) HSP 1 Score: 225 bits (574), Expect = 2.620e-65 Identity = 129/280 (46.07%), Postives = 168/280 (60.00%), Query Frame = 1
Query: 277 PEQKQTLQKAPGGKATDFPVEVVDRIRERHGFEHFDEKLFPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRR--GSLAPTELQSATT---SSQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECG-ASKGGQRTATVLVYLTNMHANGGGATAFRDLG---PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDYVR 1089
P Q GG A+ + + E FE F R+LH DP+V V+ FFT +ECD Y+ MS ++ + + G+L P L + T S+ + QRTSTTWFHHYA PEL+A+A+ LLG+ ++EEPQTVRYR E+F WHLDAL P +S GQR +T+LVYLT++ + GGAT FRDLG PL+VRPKKG L+FFPS GG PFD R LH GE VG+ + EK+IAQLW ++ Y P+ P GS H A I +Y +
Sbjct: 200 PAVSDDSQSRVGGAASSHDCSID--LNELPPFEQF--------RVLHVDPMVIAVDDFFTSEECDKYVQMSIDAENNQDQEAGALQPLLLGQSQTVGKDSRSKAQRTSTTWFHHYAGVPELMARAARLLGLPGISRFEEPQTVRYRRSEKFTWHLDALSPDVANDSSSAGQRVSTLLVYLTDLKSEEGGATMFRDLGGDGPLKVRPKKGSALLFFPSAGGIPDCPFDIRTLHCGEAVGE-DAPNEKWIAQLWLRQRDYTPTAPAGSEHRKATVAIQEYCK 468
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZRX7_9STRA) HSP 1 Score: 218 bits (555), Expect = 5.090e-65 Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 394 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
F R+LH DP+V V+ F T ECD +A++ K + + AP ++ QS T + QRTSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 26 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 261
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2N1B0_9STRA) HSP 1 Score: 216 bits (550), Expect = 6.490e-64 Identity = 117/235 (49.79%), Postives = 150/235 (63.83%), Query Frame = 1
Query: 394 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPI 1074
F R+LH DP++ ++ F TP ECD YI++++ K + + AP E+ QS T + QRTSTTWFHHY L+AKAS LLG+ +WEEPQTVRYR E+F WHLDAL PSE GGQR AT+LVYL ++ GG+T FRDLG PL+V+PKKG L+FFP+ GG PFD R LHAGE V + +K+IAQLW + Y P+ P G+SHEAA + +
Sbjct: 57 FTKFRILHTDPMLLSIDDFLTPTECDTYISLTSNPKYDKNANT-APMEIGQSKTVGKDMYSKSQRTSTTWFHHYRGMAGLMAKASRLLGLKGIERWEEPQTVRYRRSEKFTWHLDALAPSEELTKAGGQRVATLLVYLADLPDGCGGSTMFRDLGGESGEPLKVQPKKGSALLFFPAAGGIPNVPFDIRTLHAGEAVSDESD-DDKWIAQLWLREHVYTPTAPPGNSHEAAVEAV 289
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QXQ4_9STRA) HSP 1 Score: 218 bits (555), Expect = 8.960e-64 Identity = 118/238 (49.58%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 394 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTEL-QSATTSSQF--QQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKGGQRTATVLVYLTNMHANGGGATAFRDLG-----PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
F R+LH DP+V V+ F T ECD +A++ K + + AP ++ QS T + QRTSTTWFHHY P+L+AKAS LLG+D+ +WEEPQTVRYR E+F WHLDAL PS+ A GGQR AT++VYL ++ GG+T FRDLG PL+V PKKG LVFFP+ GG PFD R LHAGE V ++ +K+IAQLW + Y P+ P G++H AA I Y
Sbjct: 123 FEKFRVLHVDPMVLCVDDFLTSDECDTLVALTDNPKYDKNANT-APMKIGQSKTVGKDMYSKSQRTSTTWFHHYRGLPQLMAKASRLLGLDNIDRWEEPQTVRYRRSEKFTWHLDALGPSDELAKSGGQRVATLIVYLADLPEGSGGSTMFRDLGGESGEPLKVHPKKGSALVFFPAAGGIPNVPFDIRTLHAGEAVSDESE-DDKWIAQLWLRETKYTPTAPPGNTHAAATDAISKY 358
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KB24_9STRA) HSP 1 Score: 215 bits (548), Expect = 1.350e-61 Identity = 120/255 (47.06%), Postives = 153/255 (60.00%), Query Frame = 1
Query: 394 FPGIRLLHADPVVFEVEGFFTPQECDAYIAMSTLKKSGRRRGSLAPTELQSATTS---------------SQFQQQRTSTTWFHHYASAPELVAKASLLLGVDDYCKWEEPQTVRYRPGERFNWHLDALPPSECGASKG-GQRTATVLVYLTNMHANGGGATAFRDLG---------PLRVRPKKGKCLVFFPSFGGEAGSPFDSRVLHAGEVVGQGNKAKEKYIAQLWCHKKPYPPSVPEGSSHEAAEKPIVDY 1083
F R+LH DP+V ++ FFT +ECD Y+ +S + + + A E T+ S+ + QRTSTTWFH+Y PEL+AKAS LLG++ ++EEPQTVRYR E+F WHLDAL P E G GQR AT+LVYLT++ A GGAT FRDLG PL+VRPKKG L+FFPS GG G+PFD R LH GE V + + EK+IAQLW ++ Y P+ P G+SH A I Y
Sbjct: 204 FEKFRVLHTDPMVLAIDDFFTNEECDKYVQISIDAEKQQTNSAAAGDETTQEETALQPMLLGQSQTVGKDSRSKAQRTSTTWFHYYKGVPELMAKASRLLGLEGIDRFEEPQTVRYRRNEKFTWHLDALSPEEANNPSGSGQRIATLLVYLTDVPAGSGGATMFRDLGGNNGAEDSQPLKVRPKKGSALLFFPSAGGIPGAPFDIRTLHCGEAVAE-DAENEKWIAQLWLRQRGYEPTAPVGNSHGDASDEIGRY 457 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6877.15007.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6877.15007.1 >prot_E_fasciculatus_S2_contig6877.15007.1 ID=prot_E_fasciculatus_S2_contig6877.15007.1|Name=mRNA_E_fasciculatus_S2_contig6877.15007.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=360bp MRCSVFLACIALTPGVAFHPNHQARLRMQQGFGKQTQSKTPAKLKTPAKAback to top mRNA from alignment at E_fasciculatus_S2_contig6877:3097..6834- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6877.15007.1 ID=mRNA_E_fasciculatus_S2_contig6877.15007.1|Name=mRNA_E_fasciculatus_S2_contig6877.15007.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3738bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6877:3097..6834- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6877:3097..6834- >mRNA_E_fasciculatus_S2_contig6877.15007.1 ID=mRNA_E_fasciculatus_S2_contig6877.15007.1|Name=mRNA_E_fasciculatus_S2_contig6877.15007.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1080bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6877:3097..6834- (Ectocarpus fasciculatus EfasUO2)back to top |