mRNA_E_fasciculatus_S2_contig6874.15006.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Putative (scytonemin-related tyrosinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSN5_ECTSI) HSP 1 Score: 175 bits (444), Expect = 2.450e-49 Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVLWADCRCTLSAEAVAGQTPSE 267
MLLTESMNAGAHGHIHELLGGAWSSDW GF+NRTE+I+LPF HTIVPLMKYLWR YLQCET CDFSV WADCRCTLSAEAVAGQTPSE
Sbjct: 304 MLLTESMNAGAHGHIHELLGGAWSSDWSGFYNRTEKIILPFAHTIVPLMKYLWRTEYLQCETTCDFSVSWADCRCTLSAEAVAGQTPSE 392
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z8_ECTSI) HSP 1 Score: 152 bits (384), Expect = 3.840e-45 Identity = 78/113 (69.03%), Postives = 89/113 (78.76%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVLWADCR-CTLSAEAVAGQTPSEASARSANLHNNSTLPASKHRTIE 336
MLLT+SMNAGAHGHI ELL G WSS W GF+NRTEEIVLPFVHTI+PLM+YLWRA+YLQC+T + L + CTLSAEAVAGQTPSE + H+NSTLP SKHR +E
Sbjct: 6 MLLTDSMNAGAHGHIRELLDGTWSSYWSGFYNRTEEIVLPFVHTILPLMEYLWRADYLQCKTTYELQRLVGGLQVCTLSAEAVAGQTPSE------DKHDNSTLPGSKHRPVE 112
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Hypothetical (tyrosinase-like protein F21C3.2 in chromosome I, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K2_ECTSI) HSP 1 Score: 100 bits (249), Expect = 4.330e-22 Identity = 47/81 (58.02%), Postives = 53/81 (65.43%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVL-WADCRCTLSAE 240
M LTES N GAHG IHELLGGAWSS+ + RT ++V PFVH VPL+K LWR Y+QC C V W DC CT S E
Sbjct: 300 MALTESFNDGAHGEIHELLGGAWSSEATAYSERTSDLVQPFVHVAVPLLKMLWRTGYMQCPETCALDVTPWEDCACTCSEE 380
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: TYR (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI9_9PHAE) HSP 1 Score: 99.4 bits (246), Expect = 1.210e-21 Identity = 45/77 (58.44%), Postives = 52/77 (67.53%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVL-WADCRCT 228
M LTES N GAHG IHELLGGAWS + + RT ++V PFVH VPL+K LWR Y+QC +C F V W DC CT
Sbjct: 493 MALTESFNDGAHGEIHELLGGAWSLEATAYAERTSDVVQPFVHVAVPLLKMLWRTGYIQCPEECAFGVTPWEDCACT 569
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: TYR (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFW1_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 1.160e-19 Identity = 49/125 (39.20%), Postives = 73/125 (58.40%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVLWADCRCTLSAEAVAGQTPSEASARSANLHNNSTLPASKHRTIERLLSAPRASHICG 375
M L+ ++ + AHGHIHE++GGAWS + RT E+VLPF+H I K LWRA+YL C C + V W +C+C+ A A++G++P E + A L + S+ KH + L A + + G
Sbjct: 251 MSLSSALKSSAHGHIHEIVGGAWSMEAGVVAKRTTELVLPFLHEIYA--KELWRADYLVCPKSCSYDVPWVECQCSCDATALSGKSPLEV-LKDAGLLSGSSFFYDKHLELIENLEATQEDTLAG 372
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Tyrosinase-like (protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSM9_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 2.360e-19 Identity = 49/126 (38.89%), Postives = 74/126 (58.73%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVLWADCRCTLSAEAVAGQTPSEASARSANLHNNSTLPASKH-RTIERLLSAPRASHICG 375
M L+ ++ AHGHIHE++GGAWS + RT ++VLPF+H + K LWRA+YL C C + W +C+C+ A A+AG++P E + A L + S+ KH + IE L +A + + G
Sbjct: 392 MSLSAALGTSAHGHIHEIVGGAWSMEAGVVARRTTDLVLPFLHVVQIYTKKLWRADYLVCPESCSNNAPWMECQCSCDATAMAGKSPLEV-LKDAGLLSGSSFFYDKHLKLIENLDAATQEGTLAG 516
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Tyrosinase-like (protein 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNR4_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 3.820e-11 Identity = 32/88 (36.36%), Postives = 48/88 (54.55%), Query Frame = 1
Query: 19 MNAGAHGHIHELLGGAWSSDWFG-----FFNRTEEIVLPFVHTIVPLMKYLWRANYLQCETKCDFSVLWADCRCTLSAEAVAGQTPSE 267
+NA AHGHIHE +GG+W+ +FG ++ V+ F H I L K LWR+ +L C C W DC+C A A+ ++ ++
Sbjct: 399 LNAAAHGHIHETVGGSWNH-YFGDEAKELDEEQDDSVMTFAHEIQALSKELWRSGFLDCPDTCSMDTPWEDCQCQCDAGAIGSRSAAQ 485
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Match: Tyrosinase_Cu-bd (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L614_9PHAE) HSP 1 Score: 62.0 bits (149), Expect = 1.310e-8 Identity = 35/109 (32.11%), Postives = 53/109 (48.62%), Query Frame = 1
Query: 1 MLLTESMNAGAHGHIHELLGGAWSSDWFG-----FFNRTEEIVLPFVHTI-----------VP----LMKYLWRANYLQCETKCDFSVLWADCRCTLSAEAVAGQTPSE 267
M ++ +NA AHGHIHE +GG+W+ +FG ++ V+ F H I VP L K LWR+ +L C C W DC+C A A+ ++ ++
Sbjct: 282 MSFSKVLNAAAHGHIHETMGGSWNH-YFGHEASELDEEQDDSVMTFAHEIQASDSSNNGNAVPGYEALSKELWRSGFLDCPDTCSMDTPWQDCQCQCDAGAIGSRSAAQ 389 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6874.15006.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6874.15006.1 >prot_E_fasciculatus_S2_contig6874.15006.1 ID=prot_E_fasciculatus_S2_contig6874.15006.1|Name=mRNA_E_fasciculatus_S2_contig6874.15006.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=132bp MLLTESMNAGAHGHIHELLGGAWSSDWFGFFNRTEEIVLPFVHTIVPLMKback to top mRNA from alignment at E_fasciculatus_S2_contig6874:2002..3209+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6874.15006.1 ID=mRNA_E_fasciculatus_S2_contig6874.15006.1|Name=mRNA_E_fasciculatus_S2_contig6874.15006.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1208bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6874:2002..3209+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6874:2002..3209+ >mRNA_E_fasciculatus_S2_contig6874.15006.1 ID=mRNA_E_fasciculatus_S2_contig6874.15006.1|Name=mRNA_E_fasciculatus_S2_contig6874.15006.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=396bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6874:2002..3209+ (Ectocarpus fasciculatus EfasUO2)back to top |