mRNA_E_fasciculatus_S2_contig6869.15000.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6869.15000.1
Unique NamemRNA_E_fasciculatus_S2_contig6869.15000.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAQ0_9PHAE)

HSP 1 Score: 395 bits (1016), Expect = 3.910e-134
Identity = 214/239 (89.54%), Postives = 220/239 (92.05%), Query Frame = 3 
Query:   36 MVVARAVGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLM 752
            MVVAR VGTAL LLLAWR+WAI+PRRWRQ  AQQRAQSP Q+TS SS  +AGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGL+SGR RV TIPRSREVGQSYLTSV TTLLAGLHAAVVVVTVRPDLVLVNGPG        TCIPVCVAASALRFFGLGSSCSRT+FCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLM
Sbjct:    1 MVVARVVGTAL-LLLAWRVWAIIPRRWRQWPAQQRAQSPQQQTSTSS--SAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLMSGRSRVLTIPRSREVGQSYLTSVFTTLLAGLHAAVVVVTVRPDLVLVNGPG--------TCIPVCVAASALRFFGLGSSCSRTVFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLM 228
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Beta(1,4)-N-acetylglucosaminyltransferase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX40_ECTSI)

HSP 1 Score: 309 bits (791), Expect = 5.120e-101
Identity = 158/173 (91.33%), Postives = 161/173 (93.06%), Query Frame = 3 
Query:  234 GGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLM 752
            GGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGL+SGRCRVR IPRSREVGQSYLTSV TTLLA LHAAVVVVTVRPDLVLVNGPG        TCIPVCVAA ALRFFGLGSSCSRT+FCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL+
Sbjct:    4 GGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLMSGRCRVRAIPRSREVGQSYLTSVFTTLLAALHAAVVVVTVRPDLVLVNGPG--------TCIPVCVAAFALRFFGLGSSCSRTVFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLV 168
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZ72_9STRA)

HSP 1 Score: 190 bits (482), Expect = 7.010e-54
Identity = 121/240 (50.42%), Postives = 154/240 (64.17%), Query Frame = 3 
Query:   39 VVARAVGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAA---GRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            V A AV  A+ L   WR+W +LPRR    SA     SP   TS  S       G   +K+ TLVVLGSGGHT+EMLKL  RLS E Y+PL +VVA++DHTS ++   E   S   +V TIPRSREVGQS+ ++V T++ + L++  VV   +PDL+L NGPG        TCIP+CVA    RF GL ++ ++ IFCESF RV+ LSLSGRI+Y +AD FVVHWP+L  KYP A Y G +
Sbjct:    8 VTAVAVVVAVFL---WRIWCMLPRRRHGNSAA----SPLLGTSPFSGNQTLHGGATAKKIRTLVVLGSGGHTTEMLKLIKRLSVEQYTPLAFVVAASDHTSEEKARMERKGSA-LQVYTIPRSREVGQSWTSTVFTSMHSLLYSIAVVFHFQPDLLLCNGPG--------TCIPICVALLLRRFLGLDTT-AKLIFCESFARVQRLSLSGRILYHVADAFVVHWPQLQAKYPHATYLGTI 230
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C002_SAPPC)

HSP 1 Score: 186 bits (471), Expect = 1.730e-52
Identity = 110/240 (45.83%), Postives = 145/240 (60.42%), Query Frame = 3 
Query:   30 WWMVVARAVGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            W +++A A G A+++L  WR+W ILP R                    +PPA         TLVVLGSGGHT+EML L  RLSP  Y+PL YVVA+TDHTS ++   E   S       IPRSREVGQS++T++ +T  A +H   +V   +PDL+L NGPG        TCIP+C A   LRFFGL +  ++ +FCESF RV+ LSLSG+++Y +AD FVVHWP+L  +Y  + Y G L
Sbjct:    2 WRLLLATATGLAVLVL--WRLWCILPAR----------------IKGGAPPARKPSTSTFRTLVVLGSGGHTTEMLALIKRLSPTRYAPLAYVVAATDHTSREKAIAERQASPDAFFE-IPRSREVGQSWVTTIFSTAKAFVHCMQIVFRYQPDLLLCNGPG--------TCIPLCAAVLLLRFFGLRTD-AKILFCESFARVQRLSLSGKLLYYVADEFVVHWPQLQAQYKASRYLGVL 213
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G189_9STRA)

HSP 1 Score: 185 bits (470), Expect = 3.740e-52
Identity = 109/232 (46.98%), Postives = 144/232 (62.07%), Query Frame = 3 
Query:   54 VGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            V    V +  WR+W ILPRR    ++     +P + +S +        G    TLVVLGSGGHT+EMLKL  RLS +TY+PL +VVA++DHTS ++   E    G     TIPRSREVGQS++++V TT  + L++  VV   +PD+++ NGPG        TCIP+C A    RF G   S S+ IFCESF RV+ LSLSGR++Y +AD FVVHWP+L  KYP A Y G +
Sbjct:    8 VAVVAVAVCLWRVWCILPRR-NGATSSSLLHTPGKPSSGNQTSTTS--GSTARTLVVLGSGGHTTEMLKLIKRLSMDTYAPLAFVVAASDHTSEEKARVERKDDGPLHFYTIPRSREVGQSWVSTVFTTAYSFLYSVWVVFHFQPDVLVCNGPG--------TCIPICAALLVRRFLGHQPS-SKLIFCESFARVQRLSLSGRLLYHVADAFVVHWPQLQAKYPHATYLGTI 227
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: UDP-N-acetylglucosamine (transferase subunit ALG14 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YB24_9STRA)

HSP 1 Score: 181 bits (459), Expect = 9.520e-51
Identity = 110/233 (47.21%), Postives = 140/233 (60.09%), Query Frame = 3 
Query:   51 AVGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            A+G  LV L   R W ILP R R           P+KT+         P     TLVVLGSGGHT+EMLKL  RL    Y+PL +VVA+TDHTS ++  +E   +       IPRSREVGQS++T+V +T  A LH  ++V+  +PDL+L NGPG        TCIP+C A   LRF GL +  ++ IFCESF RV  LSLSG+++Y + D FVVHWP+L   YPR+ Y G L
Sbjct:    6 AIGALLVALAFVRFWCILPARIRGTL--------PRKTT---------PSDSFRTLVVLGSGGHTTEMLKLIKRLQRSRYTPLAFVVAATDHTSREKAKQERQ-NPDITFFEIPRSREVGQSWITTVFSTAKAFLHCMIIVLRYQPDLLLCNGPG--------TCIPLCAAVLLLRFVGLKTD-AKIIFCESFARVTHLSLSGKLLYPVVDEFVVHWPQLQAAYPRSRYLGVL 211
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIK9_9STRA)

HSP 1 Score: 181 bits (459), Expect = 1.010e-50
Identity = 108/224 (48.21%), Postives = 142/224 (63.39%), Query Frame = 3 
Query:   84 WRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSAD--RIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            WR+  ILPRR +Q              S+  PP        V TLVVLGSGGHT+EMLKL  RLS   Y+P  +VVA+TDHTS +  RI ++G      +  TIPRSREVGQS+LT+V TT  + L++  VV+  +PDL+L NGPG        TCIP+C A   LRF G+ ++ S+ +FCESF RV+ LS+SG+I+Y +AD F+VHW EL  +YP A+Y G +
Sbjct:   18 WRLRCILPRRGKQTVP-----------SSKLPPLV-----SVRTLVVLGSGGHTTEMLKLIKRLSTTRYTPFAFVVAATDHTSQEKARIERKG---EELQFFTIPRSREVGQSWLTTVFTTAYSFLYSMWVVIRFQPDLLLCNGPG--------TCIPICAAVLLLRFLGIMTN-SKILFCESFARVQRLSMSGKILYPIADEFIVHWSELQAQYPHAKYLGTI 213
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Beta-N-acetylglucosaminyltransferase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL6_9STRA)

HSP 1 Score: 178 bits (452), Expect = 2.920e-50
Identity = 93/179 (51.96%), Postives = 122/179 (68.16%), Query Frame = 3 
Query:  216 LVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCR--VRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQ 746
            +VVLGSGGHT+EMLKL      + Y+PL YV+A+TDHTSADRIP      G     V T+PRSREVGQ + ++  TT +A L  A +V  VRPD+++VNGPG        TC+P+C    AL+   +    ++ +F ESFCRV++LSL+G ++Y LADRF+VHWPEL  KYPRAEY G+
Sbjct:    1 MVVLGSGGHTTEMLKLLQGAPTDVYAPLHYVIAATDHTSADRIPHADAAPGSAATVVHTVPRSREVGQGWASTCATTAVAMLRCAWLVACVRPDVLIVNGPG--------TCVPICACVFALKVVAIRPR-AKLVFVESFCRVETLSLTGWLLYPLADRFLVHWPELAAKYPRAEYVGR 170
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BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Aste57867_10601 (protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KR83_9STRA)

HSP 1 Score: 178 bits (451), Expect = 5.800e-50
Identity = 101/196 (51.53%), Postives = 132/196 (67.35%), Query Frame = 3 
Query:  162 TSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQL 749
            T  SSPPA  R      TLVVLGSGGHT+EMLKL  RLS   Y+PL +VVA+TDHTS ++   E       R  +IPRSREVGQS++T++ +T  A L++  +VV  +PD++L NGPG        TCIP+C A   LRF G+ +  S+ +FCESF RV+ LSLSG+++Y + D FVVHWP+L  KYPRA+Y G +
Sbjct:    3 TLKSSPPAPFR------TLVVLGSGGHTTEMLKLIKRLSVTQYTPLAFVVAATDHTSEEKARMERKDEA-LRFFSIPRSREVGQSWITTIFSTAYAFLYSMWIVVHYQPDVLLCNGPG--------TCIPICAAVLLLRFVGIKTH-SKILFCESFARVQRLSLSGKLLYPIVDEFVVHWPQLQEKYPRAKYLGTI 182
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS47_GLOUD)

HSP 1 Score: 171 bits (432), Expect = 1.580e-46
Identity = 110/240 (45.83%), Postives = 141/240 (58.75%), Query Frame = 3 
Query:   36 MVVARAVGTALVLLLA---WRMWAIL-PRRWRQKSAQQRAQSPPQKTSASSPPAAGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSADRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVRPDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCRVKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAG 743
            M +  AV  AL LLL     R+W+++ P R +   A  +  SPP  TSA       R    V T+VVLGSGGHT+E+LKL  RL+   Y+P+ +VVA TD TS ++   +   S       IPRSREVGQS+ +SV TTL A       V T RP LVL NGPG        TCIP+       RF G+ +  S+ IFCESF RV+SLSLSG+I+Y +AD FV+HWP+L  KYP+  + G
Sbjct:    4 MALVAAVALALTLLLVAIILRIWSVVVPHRVKSSLAAYKV-SPPMVTSADKT----RENATVRTMVVLGSGGHTTEILKLMKRLNRSVYTPIAFVVAETDKTSQEKTALDWKPSAADEFVIIPRSREVGQSWSSSVWTTLRAFRFCLTEVYTHRPQLVLCNGPG--------TCIPIVATVLLFRFLGIQTH-SKVIFCESFARVQSLSLSGKILYYVADEFVIHWPQLQAKYPKTRHLG 229
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6869.15000.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.910e-13489.54protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Beta(1,4)-N-acetylglucosaminyltransferase5.120e-10191.33n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized7.010e-5450.42protein n=1 Tax=Aphanomyces invadans TaxID=157072 ... [more]
Uncharacterized1.730e-5245.83protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A06... [more]
Uncharacterized3.740e-5246.98protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
UDP-N-acetylglucosamine9.520e-5147.21transferase subunit ALG14 n=1 Tax=Achlya hypogyna ... [more]
Uncharacterized1.010e-5048.21protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
Beta-N-acetylglucosaminyltransferase2.920e-5051.96n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Y... [more]
Aste57867_106015.800e-5051.53protein n=1 Tax=Aphanomyces stellatus TaxID=120398... [more]
Uncharacterized1.580e-4645.83protein n=1 Tax=Globisporangium ultimum (strain AT... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6869contigE_fasciculatus_S2_contig6869:1103..8113 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score312.0
Seed ortholog evalue2.4e-82
Seed eggNOG ortholog2880.D7FX40
Preferred nameALG14
Model size1470
KEGG koko:K01363,ko:K07441
KEGG ReactionR05970
KEGG Pathwayko00510,ko00513,ko01100,ko04140,ko04142,ko04210,ko04612,ko04621,ko04924,map00510,map00513,map01100,map04140,map04142,map04210,map04612,map04621,map04924
KEGG ModuleM00055
Hectar predicted targeting categorysignal peptide
GOsGO:0003674,GO:0003824,GO:0004577,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0007154,GO:0007267,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0023052,GO:0030154,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0032502,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043495,GO:0043541,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045165,GO:0045168,GO:0046331,GO:0048869,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
Exons4
EggNOG free text desc.dolichol-linked oligosaccharide biosynthetic process
EggNOG OGsKOG3339@1,KOG3339@2759
Ec32 ortholog descriptionbeta(1,4)-N-acetylglucosaminyltransferase
Ec32 orthologEc-10_004190.2
EC2.4.1.141,3.4.22.1
Cds size720
COG Functional cat.S
CAZyGT1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko00536,ko01000,ko01002,ko01003,ko03110,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6869.15000.1prot_E_fasciculatus_S2_contig6869.15000.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6869 1818..8078 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842344.0487664-UTR-E_fasciculatus_S2_contig6869:1102..18171696842344.0487664-UTR-E_fasciculatus_S2_contig6869:1102..1817Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6869 1103..1817 -
1696842344.120982-UTR-E_fasciculatus_S2_contig6869:8078..81131696842344.120982-UTR-E_fasciculatus_S2_contig6869:8078..8113Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6869 8079..8113 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842344.0711517-CDS-E_fasciculatus_S2_contig6869:1817..20351696842344.0711517-CDS-E_fasciculatus_S2_contig6869:1817..2035Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6869 1818..2035 -
1696842344.0838206-CDS-E_fasciculatus_S2_contig6869:2535..26681696842344.0838206-CDS-E_fasciculatus_S2_contig6869:2535..2668Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6869 2536..2668 -
1696842344.094139-CDS-E_fasciculatus_S2_contig6869:3522..36921696842344.094139-CDS-E_fasciculatus_S2_contig6869:3522..3692Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6869 3523..3692 -
1696842344.1047676-CDS-E_fasciculatus_S2_contig6869:7879..80781696842344.1047676-CDS-E_fasciculatus_S2_contig6869:7879..8078Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6869 7880..8078 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6869.15000.1

>prot_E_fasciculatus_S2_contig6869.15000.1 ID=prot_E_fasciculatus_S2_contig6869.15000.1|Name=mRNA_E_fasciculatus_S2_contig6869.15000.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=240bp
MVVARAVGTALVLLLAWRMWAILPRRWRQKSAQQRAQSPPQKTSASSPPA
AGRPGRKVNTLVVLGSGGHTSEMLKLTSRLSPETYSPLCYVVASTDHTSA
DRIPKEGLVSGRCRVRTIPRSREVGQSYLTSVLTTLLAGLHAAVVVVTVR
PDLVLVNGPGEQTSIGRRTCIPVCVAASALRFFGLGSSCSRTIFCESFCR
VKSLSLSGRIMYLLADRFVVHWPELLVKYPRAEYAGQLM*
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mRNA from alignment at E_fasciculatus_S2_contig6869:1103..8113-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6869.15000.1 ID=mRNA_E_fasciculatus_S2_contig6869.15000.1|Name=mRNA_E_fasciculatus_S2_contig6869.15000.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7011bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6869:1103..8113- (Ectocarpus fasciculatus EfasUO2)
CAGACCTCAAGTCTCAAGTCCGTCTGTGTTGGTGGATGGTGGTGGCGCGT
GCAGTGGGGACCGCCCTCGTGCTGCTGCTGGCATGGCGCATGTGGGCAAT
ACTGCCGCGGCGGTGGCGGCAAAAGTCGGCGCAGCAACGCGCGCAATCGC
CACCCCAGAAAACTAGCGCTTCCTCTCCGCCGGCAGCAGGCAGGCCAGGC
CGGAAGGTCAACACCCTGGTCGTGCTGGGTTCGGGTGAGTGCGTTCAAGT
TGATACTGGCCTGTGTTCGCTGCGGAGAAACGGCATGCGTTTTGATTGCA
GAACGGCGTGCTGTCAAGTCGTCGGGAGGCCTCTGTCTGGTAGAGCTCGA
TAATATCTGTACAGGTGTACGGTCGGATGCAGCTGGCTCCTTTTTGAATC
GCACACAAGAGGAGTGAACATGTAGTCTACTGCTGTGCGAATTGCGCCTG
TGGGCACCGAGGCACCCTGTTTACTGCTGGGAAAATGAAGGCCCATGAAG
GGTTTTGTAAAGTAAGGCGTGTGTCGTTGTAACGCTGTAAGGTCTTGTCT
AAGGGCGTGATGAAAAACCCGCTTCCAAGGTGCTACATACAAGCTGCAGT
ATACGTACCTTCATGTCAGACTCACAGCCAGAACAACATGATACGATACA
AAAAAATTATGAATACAGCAGCAGTAGGCAAACACAGAAGGAAGACTACA
ATAGTGTACCCGTTCGAGACATGACAAGTCGAAGGGGAAATGTTGAAGTC
CTTACAGCAGTGAGTTAAAACTGGCGGGATACTGGGCTTTAGTGTCTGTT
TAAGCCTGTACACTGAATTTTTGTCAGCGATGCCAGCAGGGTGCTACGCT
TAAAAATTGAAGACTGGAACACGTCGCGAGTGTCGTTCGACAACTTGCCG
GAACTTTTAATTTTGCTCTGCTGTTGCTGATCTACGATCTACGATGTACG
TGTATGTTCAAGATATGGTATCGAACGACATTCCGGCCACCAAGAGTGTT
GGTATTCGAGGCGACACTGTAGAAGATGTCATGGATCACCGACGTGCACA
TTGGCGCCACGCCCAGGTCTGTTTCGGGGGGGGCGCTGTCGAAGGCTGAA
GCTGCGGTCCCAATAGTGAGCAAACTGGGTCCAGAGCTGAATCGTTTAGA
CCATTCGTGACCCACTCCTGAACTCTCGCCGTAGCGCCAATCTCCTGGTG
CATATGAACCGATGTTTATCTAGAAAATAGGCACCCGTTGCTGCTGCTGT
TGTGTTCTCACAGCAGCGGGTGGGGGGTGACATCCACGCGATGCCGAGCG
AGGAGGAGACGCTACAAGCGAATGCAAAGCCCACGGAAAAAACTGTCTTG
GCTGTCTCCCTCTCTCTCTTTTTCTTCCTCTTTGCCTGACGAAACCAACG
TCGCTTTGCGTTCTTCGGCCCCGCTAAAGTCCGCCAAGTGCTCCCTGAAC
GGTGCGCGGTTCTCTAGGCTTCCATCGTCAAGCAAAAAATACCCTCTCTC
ACACAGACGCCCAATACGTTTCGCCGACGTACCCCCCGTCACTAGCAACA
ACGCGCACCCATGTTGTGACACGTAGCACCAAGAGAATCCACGCACCGGC
ACCTTTGTGCATCTACCTCCAGCCGTTGACTAGATGCTGTCCTCCATTCC
GGGGACCCCTCCCGCCGGTGTTGCCTCTTGAAGCGCTACGGTCGCTTCTG
AAAGTCGTGTGTTCGAAGGTCGCCGTGAAGAAAGCTTCCCGGGGGCTCGG
AGGCACAGGCTGGTGGTGGTTGTTCTTTTGCCCTGACTGTAGTGTCGATT
CAGTCTTGCTTTGTTGCAGGCTTCCCGGCGAAACGGTACTAGCCTGCCGC
GTCGAAAGCTCTCGAGATCCAGAGCAGGATGCCGAAGGATTTTCCACGCG
ACAGACTACTGTTCGCCGGAGATCCTCCAGCAAGCGAGACTGCACCGGCA
CATATTTTGAGGGCAACGATAACCACACCACCAGCCTGCGCCTCCGAACC
CCCTGTACTGTTGTTCGCGGCGACCTACAAGACGCCCGAGCGTCAGAAGC
GCACGTGACTCTTCAAGAGGCAACACCGGAAGGAGGGGTCCCGGAATGGA
GGACAACATCTAGACAACGCCTGGCGATGCCAAACGGCGCCTGGGTTGCT
GAGCGTGCGTGGATTGATTTCTTTTTTTTTCTTCGGCGAGCCAATGTACC
ACATACACGTATATTTTTGTCTGCTGTTGGCGTTCCGTTACCGCAACGTG
GTCTACATCCCGAGACGTAGCAAAGCCCGCCCGCCCCGCTACCAATCACG
AAGGGCGCCGATGGCGGCGCTTACCAGGTGGGGGATGAAGTGGCATGCTC
GAGCCCCCCCCCGGGCGCGTCGTGTCCGAACCGCTATTTTGAGATAGCGC
TACATAGGTTGCACCGGCTTACGCGGCTGGTTACAAGGCAGGAAGGCCCG
CGCAAAGAGCTCTTGGCACGGGCGTCGTCGGCTGATACGATATGCGTTGA
GTTGACACAGCAGAGAGTGTGGGCCGAAACGTGACCACAAGAGGGACGGG
CGAGATACGGAAGCACCTCCTCCCGAACTTTTTCGTACGCCAGGGAGACA
ACACCACCCGTTCTCTACACCCACTCGGAGGAACAACAGGAATACCGAAC
CTACTGTGTGCTCGCTCTTGTGATATTTCACTGAACTCTCCTCTGGTTTA
CATCCGATTTGGTTTCGCTGACCGTCGGGTCCTACACCCCCCTCCCAGGT
ATTTAGTAGTTCGGCCATGCCGGGGGGGAGGGGGGGGGGGGTCACGGGGC
CTCTAGTACCGGCACGGCCCCCGGAAGAGTCGCGGCGCAGCCTGTGAGGT
CCAGGCCGAAAACGCTGTGACTTCACATCCGCTGCGGAAGAGGCATTCTC
TTGGTCACACGGGCTTTTCGACCAATGATCTCGCTCGCTACGCTTAGAAT
CTTCTTGAGACCATGCCGGAAGAAGCCCCGACGGCCAGCATGAAAATCGC
GGATCAACGTATGAAGATCTTAAATGGATGAAGGACCTCAAGAAGGTACA
AGTCTCGAAGTGCTACTTTTTCCCAGACGGCGTCAAGGCGTTCTCATCTA
ACCGGGAGCAGCTACTCACAACCAGGGAGGGAATGCCACAACAAGAGAGA
GATGCTTCACTAGGGATGCCCCTTATGTGATTCTGTGTCGGCTCACCTTT
TGCCGCCAACGTGTTAACCGACGAGGTCCGATCAACAGATATCTGGTAGT
TGACAAATGATCGGTATCGAGGGGGGGATTTTGCCGGGAAGCGCAGTCGG
GAACCACCACGCGAGATGCTTCACCGCCGGTGTTGGAATCACTGGCGTTC
AATCAGAACGCTGGCTAGGGGACGCTTCAATCTTGTTTGTTGTTATGTGT
AATAACAAACATCCCCCTTTTTAGTGTCGGCTGACGATGTGATTTTGTTG
GTCCGTTGTTCGACCCGGCAATCCTCCGTACAAATCACTAGCGGGCTAGA
GCCAGGAAAAGCTGCCGGGGATCCGTCATGCGAGATGCTACACCGCGGGT
GTCGGAGGCACCGACCTGTATCAGGACGCTACCTGTCGTTGTTCGTTTGA
CGCTACCTGTCGTTGTTCGTTTGACCTACCTGTCGTTGTTCGTTTGACGC
TACCTGTCGTTGTTCGTTTGACCTCGTGAGCTTATCGTGAGCATATCGTA
TTGGTTTACGTGTTGATACGTTGATTCGAAAGGTATGAGCAGAAACAATA
AATGAAAGACGATGTACGGAAGCACCTCGTCCCTATTTTCTCGCAACTCA
CGCGAACGATAATACACGTTGACGTCTATTTTGGAGAAAGCAATACATGG
GACGAACTTTTCCGTGTTCCTTCTTCATGCCTTTCATCCACTGAAATATC
TTGTTCCTCCCATTGGTTGAGTCACGCTGGCCTGCGCGCCTGCAGCGATG
GACTCCAGAAGAAATATTTTCGAGTCCATGCCTGCAGGCCCAAGTCCAGC
GTAACTTCACCAATGTAAGAAAAAGATCTTTCAGTGGATGAAAGACATGA
AGAAGAAGGAACAAGGAAAAGTTCGTTCGAAGTCTTGGTTTCTCCAAAAA
AGGTGTCAACATGTGTTCGGAAATCGAAGTAGATCATGCTCGTCTTGATT
ATTTATTTACCCAAGCCTGTGCGAGGACCCCGATCTGTGCGACAATCCGC
AACGTTACCGTAAAACAAAAAGAACTGAGCGCGCAACACCTGGTCGGTCC
TTAACCATTTCGATTTATGCCTGGATGGTTACTACCCTGTACTGCTTGGA
GGTAGAGGCACGAAGCGCGCGTTCTAGCTGTAACTCGGCATATCTGCCCT
AACAATGACGTTTTGTTGACGTTTCCCATCCCCCCCTTTCACGCCGACGT
TTTGCCGTCCATACGCCCAAGGTGGACACACGTCCGAGATGCTGAAGCTG
ACCTCACGCCTCTCGCCGGAGACCTACTCCCCGCTCTGCTACGTCGTGGC
AAGCACAGACCACACCAGCGCCGACCGCATCCCGAAGGAGGGACTGGTGT
CAGGCCGCTGCAGGGTTCGCACGATACCTCGCAGCCGTGAGGTAATCATG
GTCCCAGACATGCGTGTACATTGTCCTGTGTGTTTTGCCGACGCGTGAGA
GGTTTAGCCGCTGGATGCCCAGCCAGGAAGGGATCAGGGTGGCCAGGTAG
CAACGACCATTTTCTTGCAGTAGAGAAATACGAGAATAGGTGTGTGTCTG
TGTTCGGTTCACCATCCGGCAGCAGCAGTCCTCATTTTCCGATGCATTCG
TTTCGATCACTTCCTCGGCGCGGCAGCAGAACAGCCCCCCCGTAGAACAA
ACTGCAAGCATGTCATGCGAGTGACGCTACGTTTGAGGTCCGTTCGCCGC
ACCACGGTCCCGTCTTCCGGCTTAAATCGCCGCCTCGATGGTGCGTCCGA
ACCGACGTCTCAGCAGAGCAACCCCGGTGGCGCCTGAACGTTTTCCGTCT
TGGTCGAACTGAACGTTTTCCGTCTTGGTCGAACTGAACGTTTTCTGTCT
TGGTCGAACGTCGTTGGTTGCTAGTCCCACCAAGTGGGAACGCGCTCTTG
TCCTTGTGCAGCGAGAAACTGGTCGTCAATTTTTTCTACCAAATACAACA
TCGACTAGGGTAATGCCCGGCGAAGCCGCCCTGATTTGGATGGCCCCGTG
GGTAGCATGTCAGTCTGCATTGCCAGGGAACCTGCTGCGCACCGCTGTGC
AAGATCTACCCGATTGGCGTACAATCCGGCAGAGACGCAGAATCGGTCAA
CCTGTTCCACACGCCAACTTTGAGACAAATTCGTGACGATTTGAGTACAA
CATGATTCAGCCATTTCCGCCCTGCAGTTTGTCAAGTTGCCTCTCTCGTT
CTTCACACCCATCTCTCAATGCACCGTTTCCTGACCATGTCGCAGGTGGG
GCAGTCATATCTCACGTCGGTATTGACGACGTTGTTGGCCGGTCTGCATG
CAGCCGTTGTGGTGGTCACAGTGCGTCCAGACCTCGTTCTTGTTAACGGT
CCCGGTGAGCAAACCTCCATTGGTAGACGTGGGTTGGGGAGGCTACTGCT
GTTGACGCCGAGGCCTTGCTAGCCCCGCTTCATTTTACGAACGGACATTA
TATATGCCTAACCGTGTGCGTTGATGCTGATTCATGCAACGCCCGCTTGG
AGACCTCTTCCTTGCCGCTCCTCTTTTTTTCTGCAAACCCTTCGCATACA
TACCCCCAGAGGCGTCAGTCTGAGGTAGCGGACAACCCCCCGCCGTTCTG
CGGCGGTGCTAGACTTCAGTTACATTCTAACGACTGAGCGGGTTCTTGCC
TGCGCCGCACAGATTTTCCATACCGTTCGTGCATGATAGGAAGTAGCACG
GTAGTCGTCTAACATAGAGTGTCGACATCACGCGAACAAGTTTCTTTAGG
GAGACATCGTCTTGAGAGTTGCGTGCCTTCCAGATTGCGTGTTGTAGTCG
GGGTGTTTCTCGAGGACCCATAAATTTACCCCGCCCCCTGCGATTGTCCC
ACCCCCCCGACACAATACAACACAACAGGGACGTGCATTCCAGTGTGCGT
TGCCGCGTCCGCCCTGCGCTTCTTCGGGTTGGGGTCGAGCTGCTCCCGCA
CCATCTTCTGCGAGAGCTTCTGCCGAGTTAAGTCTCTGAGCCTGAGCGGT
CGCATCATGTATCTGCTGGCCGATCGGTTCGTGGTTCACTGGCCGGAGCT
TCTCGTCAAGTATCCCCGCGCGGAGTATGCCGGGCAGCTAATGTGAAAAG
TTTATTTCTTGGTCTCGTGCCGCAAGTTTGACCCCTCGGCAGTGTCTTGG
CGGCGGCCAGTTTTACAAGAAGAGCCACCATTTACAGAGCAAAAGCGCTC
CTTCTTCTTTAGTCGCAGTGATTTTGGCGTTCGGTGAAGTAGTCTGCCAG
TCATTTCTCCCAGAGGGAATGCTTGGCCGTGTGATGCTTGCACGGCGTTG
CACCCCCATCATGCATTTCGTTTTCTTGTACATACAGCCGATTCGGTTAT
CGCTTCTTGAGTGTGGCGTCGTGTGGTGTAATGCAACGTCTTTCCGTTAG
GTGGCGGATTTTGCGTGTTATTGATGTGATGAATGGCGATGCCGTCCATA
CAGTAGGGTGAACGATGACGCAGGTCATTGCGTGCAGCAGTTGTGAATCG
AACTCTTATCTCCTTTTTTCGTCCGGGTATATGTTTTTTTGTGCTTCGAA
CTACGTTGTGGCTAGAAAATGAATTTTGAATTTGAATTTCAGAATTGCCG
TCCGTCGACAAGAGGTGCACGTGGTGGAAGGAGTCATCATCTTCACATGG
AAATGAACCAGGTTGGCGCCCTGTATCATGCTGTCCATCGCGTCACGATC
GAGGAGAAATCGTGGACGTTGCCGCTAAGGACTTGCACCAAAAATTGTGT
ATTCAACTTTGGGGAGGGCGGGTCGTCCCAAAGCTACGGCCGTGTAGAGT
TCAGAACGAGC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6869:1103..8113-

>mRNA_E_fasciculatus_S2_contig6869.15000.1 ID=mRNA_E_fasciculatus_S2_contig6869.15000.1|Name=mRNA_E_fasciculatus_S2_contig6869.15000.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=720bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6869:1103..8113- (Ectocarpus fasciculatus EfasUO2)
ATGGTGGTGGCGCGTGCAGTGGGGACCGCCCTCGTGCTGCTGCTGGCATG
GCGCATGTGGGCAATACTGCCGCGGCGGTGGCGGCAAAAGTCGGCGCAGC
AACGCGCGCAATCGCCACCCCAGAAAACTAGCGCTTCCTCTCCGCCGGCA
GCAGGCAGGCCAGGCCGGAAGGTCAACACCCTGGTCGTGCTGGGTTCGGG
TGGACACACGTCCGAGATGCTGAAGCTGACCTCACGCCTCTCGCCGGAGA
CCTACTCCCCGCTCTGCTACGTCGTGGCAAGCACAGACCACACCAGCGCC
GACCGCATCCCGAAGGAGGGACTGGTGTCAGGCCGCTGCAGGGTTCGCAC
GATACCTCGCAGCCGTGAGGTGGGGCAGTCATATCTCACGTCGGTATTGA
CGACGTTGTTGGCCGGTCTGCATGCAGCCGTTGTGGTGGTCACAGTGCGT
CCAGACCTCGTTCTTGTTAACGGTCCCGGTGAGCAAACCTCCATTGGTAG
ACGGACGTGCATTCCAGTGTGCGTTGCCGCGTCCGCCCTGCGCTTCTTCG
GGTTGGGGTCGAGCTGCTCCCGCACCATCTTCTGCGAGAGCTTCTGCCGA
GTTAAGTCTCTGAGCCTGAGCGGTCGCATCATGTATCTGCTGGCCGATCG
GTTCGTGGTTCACTGGCCGGAGCTTCTCGTCAAGTATCCCCGCGCGGAGT
ATGCCGGGCAGCTAATGTGA
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