mRNA_E_fasciculatus_S2_contig6853.14984.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Heat (shock protein 40 like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU93_ECTSI) HSP 1 Score: 299 bits (766), Expect = 1.420e-95 Identity = 147/167 (88.02%), Postives = 154/167 (92.22%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLPVWDGGRGAGAGWSAHPSTNASALLGDKTVTGSTIVTCSVEFPVRASTALGLLETS 501
C GERVIQESGWLDLTIPKGAP+QHRIHFPGVGS+ PGRTAGDVEVAINIEPHERFMRDGSNLRME+PISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGE+EIEGGGLPVWDGGRGAG GWS H STNASALL DKTVTGSTIVTCSVEFP S L L+++
Sbjct: 434 CKGERVIQESGWLDLTIPKGAPDQHRIHFPGVGSHFPGRTAGDVEVAINIEPHERFMRDGSNLRMELPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEVEIEGGGLPVWDGGRGAGTGWSTHSSTNASALLADKTVTGSTIVTCSVEFPDITSERLQGLDSA 600
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTT1_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.000e-17 Identity = 44/117 (37.61%), Postives = 65/117 (55.56%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMR---DGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLPVW 342
CGG R +QE+ LD+ +P GAP H++ F VG+ P R AGDV + + PH R D S L + + ++L EAL G+ + LNG+ V L+ + + EI G GLP++
Sbjct: 84 CGGSRTVQETKLLDVVVPAGAPEGHKLVFSSVGNEGPLRPAGDVVLTVETHPHPNLTRSTTDPSALELHVNLTLQEALLGYNLTVYTLNGTRVDLSSIAITTDASTREIPGAGLPIF 200
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Chaperone (DNAJ protein n=1 Tax=Perkinsela sp. CCAP 1560/4 TaxID=1314962 RepID=A0A0L1KNH9_9EUGL) HSP 1 Score: 84.7 bits (208), Expect = 9.230e-16 Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLP 336
C G V+ L+L I +GAP ++F G P + GD+ + PHE F RDG NL+M + I+L EAL+GF +E+ ++G V++ + H I + G G+P
Sbjct: 219 CKGVGVMSGDHTLELEIERGAPENTTLNFEMEGDQFPDQIPGDLIFVLRTGPHETFTRDGENLKMNLKITLLEALTGFRKEVAHMDGHVVVIESAEITPHGAIITVSGEGMP 330
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: DnaJ (subfamily A member 1 n=2 Tax=Paragonimus TaxID=34503 RepID=A0A5J4N796_9TREM) HSP 1 Score: 84.3 bits (207), Expect = 1.550e-15 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLL-NRTRMISHNGEI-EIEGGGLPVW 342
C G +V++E +++ I KG + I F G G PG AGD+ + I+ +PHERF+R +L + ++L+EAL GFTR + L+G T+L+ ++ + N E EIEG G+P +
Sbjct: 195 CDGRKVVREKKVIEVPIDKGMADGESIRFAGDGDREPGLEAGDIIIHIDEQPHERFVRRRMDLIYTMSLTLSEALCGFTRTVDTLDGRTLLMTSKPGEVFTNSEYREIEGEGMPKY 310
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: dnaJ (homolog subfamily A member 2-like n=3 Tax=Coccinellini TaxID=263631 RepID=UPI001E2765E8) HSP 1 Score: 81.6 bits (200), Expect = 1.450e-14 Identity = 43/114 (37.72%), Postives = 69/114 (60.53%), Query Frame = 1
Query: 7 GERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNG-STVLLNRTRMISHNGEIE-IEGGGLPVW 342
G++V E+ L++ I KG +I F G G +P AGDV + + +PHE+F+RDG NLRME ++LTEAL GF+ ++ L+G V+ + + G+I+ +E G+P +
Sbjct: 207 GKKVNSETKILEVHIDKGMKENQKIFFRGEGDQMPDVEAGDVVIVLQQKPHEKFVRDGDNLRMEHTVTLTEALCGFSFVVKHLDGRDLVVTHPVGSVLKPGDIKTVENEGMPQY 320
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Chaperone (protein DnaJ n=1 Tax=Candidatus Kaiserbacteria bacterium RIFCSPLOWO2_01_FULL_52_12b TaxID=1798509 RepID=A0A1F6EY51_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 3.970e-14 Identity = 43/119 (36.13%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLPVWDGGRG 357
C G ++ + + IP G N I PG G + AGD+ V ++++PH F R+GSNL M++P+ LT+AL G T I+ L G T+ + M + + G G+P DGGRG
Sbjct: 216 CRGRGARRKEEEVRIHIPVGIDNGEMIRMPGQGEAIKAGVAGDLYVKVHVKPHPTFRREGSNLIMDLPVKLTDALLGTTVSIESLEGKTLEVKIPPMKRAEELLRVAGKGIPG-DGGRG 333
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Putative (dnaj chaperone n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CMH1_ANODA) HSP 1 Score: 78.6 bits (192), Expect = 9.110e-14 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIE-------IEGGGLPV 339
C G + ++ + + I KG+ + R PG G P T GDV + I PH F R+GSNL +++ I+LTEAL GF + I+ L+G T+++ SH GE+ + G G+P+
Sbjct: 108 CNGRKTVRSRKIIVIDISKGSRDGMRYVIPGEGDQEPNVTPGDVVIVIEETPHALFKRNGSNLILDMQITLTEALLGFQKPIKTLDGRTIII-----ASHPGEVTKHGAARYVLGEGMPI 222
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Putative (dnaj chaperone n=9 Tax=Nyssorhynchus TaxID=44543 RepID=A0A2M4CVL6_ANODA) HSP 1 Score: 78.6 bits (192), Expect = 1.690e-13 Identity = 42/120 (35.00%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIE-------IEGGGLPV 339
C G + ++ + + I KG+ + R PG G P T GDV + I PH F R+GSNL +++ I+LTEAL GF + I+ L+G T+++ SH GE+ + G G+P+
Sbjct: 199 CNGRKTVRSRKIIVIDISKGSRDGMRYVIPGEGDQEPNVTPGDVVIVIEETPHALFKRNGSNLILDMQITLTEALLGFQKPIKTLDGRTIII-----ASHPGEVTKHGAARYVLGEGMPI 313
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Chaperone (protein DnaJ n=1 Tax=Candidatus Vogelbacteria bacterium RIFOXYD1_FULL_46_19 TaxID=1802439 RepID=A0A1G2QG35_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 1.850e-13 Identity = 38/113 (33.63%), Postives = 64/113 (56.64%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLPV 339
C G V++++ + + +P G + I F G G +P AGD+ V I +EPH+ + RDGS+L+M++ I LT+AL G + I+ L G + L IS + ++ G+P+
Sbjct: 209 CSGLGVLKKNEEIKIKVPPGIESGEMIRFSGKGEAIPDGQAGDLYVKIRVEPHKFWKRDGSDLKMDLNIKLTDALLGSSYTIKTLEGDDLKLKIPAGISFGEVLRVKDKGVPI 321
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Match: Chaperone (protein DnaJ n=5 Tax=cellular organisms TaxID=131567 RepID=A0A534KXN5_9EURY) HSP 1 Score: 77.8 bits (190), Expect = 3.030e-13 Identity = 44/121 (36.36%), Postives = 69/121 (57.02%), Query Frame = 1
Query: 1 CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVG-SNLPGRTAGDVEVAINIEPHERFMRDGSNLRMEIPISLTEALSGFTREIQLLNGSTVLLNRTRMISHNGEIEIEGGGLPVWDG-GRG 357
C G+ I+E + + IP+G P+ ++ PG G + G GD+ VAI++ PH RF+RDG +L +E+PIS +A G E+ + G+T L + +H + + G GLP + G GRG
Sbjct: 227 CSGQGRIEERRTIAVEIPEGVPDGVQLRVPGRGLAGDAGAQPGDLYVAIHVRPHHRFVRDGDDLLIELPISFADAALGTEVEVPTMEGTTRLRVPAGVQTHT-TLRLRGKGLPRFQGHGRG 346 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6853.14984.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6853.14984.1 >prot_E_fasciculatus_S2_contig6853.14984.1 ID=prot_E_fasciculatus_S2_contig6853.14984.1|Name=mRNA_E_fasciculatus_S2_contig6853.14984.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=212bp CGGERVIQESGWLDLTIPKGAPNQHRIHFPGVGSNLPGRTAGDVEVAINIback to top mRNA from alignment at E_fasciculatus_S2_contig6853:1969..3465- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6853.14984.1 ID=mRNA_E_fasciculatus_S2_contig6853.14984.1|Name=mRNA_E_fasciculatus_S2_contig6853.14984.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1497bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6853:1969..3465- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6853:1969..3465- >mRNA_E_fasciculatus_S2_contig6853.14984.1 ID=mRNA_E_fasciculatus_S2_contig6853.14984.1|Name=mRNA_E_fasciculatus_S2_contig6853.14984.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=636bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6853:1969..3465- (Ectocarpus fasciculatus EfasUO2)back to top |