mRNA_E_fasciculatus_S2_contig6837.14961.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JR35_9PHAE) HSP 1 Score: 435 bits (1118), Expect = 1.450e-148 Identity = 255/288 (88.54%), Postives = 262/288 (90.97%), Query Frame = 1
Query: 1 MARSAQEAPR---RVGRETTLNASAGAGGDDTGEDVRQRAQDMHSTMTSEGKDEMQKNASREAHNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSAEGAPRVVDAGCGTGALVSFLKEAGVKERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVD-EEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQ 852
MARS +EAP RVGR T LNASAGA G+DTGEDVRQRAQDMHSTMTSEGKDE++KNASREAHNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSA+GAPRVVDAGCGTGALVSFLKEAGVKER VTGVDVSPEMGT FKDRFPESEIIT+EFVNYADEFVSLRERLSAIAA XXXXXXXXXXXXXXX EEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPE+DALERLVQ
Sbjct: 1 MARSGEEAPAAHCRVGRATALNASAGADGEDTGEDVRQRAQDMHSTMTSEGKDEVRKNASREAHNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSADGAPRVVDAGCGTGALVSFLKEAGVKERDVTGVDVSPEMGTAFKDRFPESEIITAEFVNYADEFVSLRERLSAIAAAGDGAAAAXXXXXXXXXXXXXXXXXXXXXXXEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPEQDALERLVQ 288
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ3_9STRA) HSP 1 Score: 125 bits (313), Expect = 7.730e-29 Identity = 88/226 (38.94%), Postives = 116/226 (51.33%), Query Frame = 1
Query: 181 HNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSAEGAPRVVDAGCGTGALVSFL-KEAGVK-ERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRE-RLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLV 849
HN+ Q FD+ V FFSS QA P+ P L +I+ + + E V+D GCGTGAL+ FL K GV E + G+D+S M + ++R P S T +F+ +F S+ + SA A A V E VG + FNAVFGNLWDQ AAL +L GG VVISHP+G FV LK D+ +VPH LP ++ LE +V
Sbjct: 158 HNQMQREAFDNAVNFFSSKQAVPRAVVPRLEKISSSV--TVEKGQYVLDVGCGTGALLPFLAKNTGVYGEDKLVGLDLSSGMVGIARERNPNSGFFTGDFM----DFKSIGDAEFSATATVVDVSASENE---------------ADTVATNPE---VGAIFFNAVFGNLWDQPAALAHCCELLPTGGNVVISHPMGSTFVKMLKKKDNRLVPHLLPTQEQLEAMV 359
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5Q3_DIALT) HSP 1 Score: 115 bits (289), Expect = 1.170e-25 Identity = 91/223 (40.81%), Postives = 113/223 (50.67%), Query Frame = 1
Query: 172 REAHNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSAEGA-----PRVVDAGCGTGALVSFLKEAGVKERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILE-EGGKVVISHPLGRDFVSRLKAVDDTVVPHELP 822
R AHN RQAAVFD+ V +F+S ATP + P LRRIA A P A+GA PRV+D GCG GALV FL+E + G+D+S +M R + ++ ++ V++AD A AA G A D VVFNA FGN+ AL A GG+VVI+HPLGR FVSRL+A D VVPHELP
Sbjct: 83 RAAHNARQAAVFDAAVDWFASAAATPPDVEPRLRRIAAAALP-ADGARAAPPPRVLDVGCGAGALVPFLRERA-PALDLLGLDLSAKMAAACAARHG-ARVLCADVVDWAD----------AEAAA----------------------GRGGAFD---------AVVFNACFGNMHSPRLALRAACTAARPSGGRVVIAHPLGRAFVSRLRAEDAAVVPHELP 261
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A067_AUXPR) HSP 1 Score: 87.4 bits (215), Expect = 7.050e-16 Identity = 73/223 (32.74%), Postives = 102/223 (45.74%), Query Frame = 1
Query: 181 HNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIAEACRPSAEGAPRVVDAGCGTGALVSFLKEAGVKERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLV 849
H RQA+ F S+V TP E L IA + P A RV+DAGCGTGAL+ L+ G+++ + VD P M + RF + + + + +R +A G V FNAVFGNL+DQ AAL RA +++ GG + ISHPLGR ++ + + VVPHELP+ AL+RL+
Sbjct: 65 HAERQASFFSSRVQDLRD-GITP-EIDARLHTIAGSV-PGLGPASRVLDAGCGTGALIPHLQALGIQD--ILAVDTCPAMLAQVEARFGQGDSLGN--------VPCVRTWPGDVAELPLYQ------------------------------GPFSAVFFNAVFGNLYDQHAALLRATQLIQPGGYISISHPLGRAWLQEFRQREPEVVPHELPDEVALQRLI 244
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7U3_NANGC) HSP 1 Score: 87.0 bits (214), Expect = 1.310e-15 Identity = 65/200 (32.50%), Postives = 95/200 (47.50%), Query Frame = 1
Query: 238 QATPKEQFPSLRRIAEAC--RPSAEGAPRVVDAGCGTGALVSFLK---EAGVKERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELP 822
+ATP++ P LRRIAEA RP+ RV+D G GTGAL+ FL + E+ + G+D+S M V ++ FP + + + + + ER + +E G V FNA FGN++DQ AL ++++GG+VVISHPLG DFV L+ +VV +LP
Sbjct: 153 EATPEDVIPRLRRIAEAAALRPT----DRVLDVGTGTGALLPFLLPYLDENAGEKRIVGMDLSAGMLVVARESFPRASFWQGDVL----DLPVIYER-----------------------------------EGGKEEGLFTAVFFNACFGNVFDQARALREVGKLVKKGGRVVISHPLGADFVEELRRRSPSVVLADLP 309
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L497_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.480e-14 Identity = 71/230 (30.87%), Postives = 97/230 (42.17%), Query Frame = 1
Query: 175 EAHNRRQAAVFDSKVAFFSSPQATPKEQFPSLRRIA-------EACRPSAEGAPRVVDAGCGTGALVSFLKEAGVKER---HVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVS--LRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANIL--EEGGKVVISHPLGRDFVSRLKAVDDTVVPHELP 822
E H + Q VFD FF++ Q P E P + +A R + R++D CG+GAL FL E V+ + GVDV+P+M V A E+ S LR R I ++EE++ V V+ NA FGN W+ A LE L ++GG V++SHPLG +FV +L D T VPH LP
Sbjct: 90 EQHLQHQKHVFDEMSDFFATQQTVPDELVPVYQHLALQIWESRPEARDEEKTTTRIMDGACGSGALFPFLLEQAVESDLPVEIVGVDVAPKM------------------VAGAQEYASSLLRSRDDHIIQVVESDVLNFQ------------------LNEEDDRFDV--VILNACFGNFWNTSAVLEHICLRLLKQKGGSVIVSHPLGSNFVEKLNREDPTTVPHLLP 281
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ETG7_9EUKA) HSP 1 Score: 75.9 bits (185), Expect = 1.620e-12 Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 1
Query: 652 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDAL 837
VVFNA FGN++DQ AAL AA +L GG ISHPLG FV L A D +VVPHELP +AL
Sbjct: 63 VVFNACFGNMFDQRAALAHAAALLRPGGSAFISHPLGSSFVRELHASDPSVVPHELPSLEAL 124
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0Z1F9_COCSC) HSP 1 Score: 75.5 bits (184), Expect = 7.390e-12 Identity = 51/178 (28.65%), Postives = 83/178 (46.63%), Query Frame = 1
Query: 316 RVVDAGCGTGALVSFLKEAGVKERHVTGVDVSPEMGTVFKDRFPESEIITSEFVNYADEFVSLRERLSAIAAXXXXXXXXXXXXXXXXXXXXXXXGAAKAVDEEEEAGGVGTVVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLV 849
RV+D G GTG L+ + + G+++ + VD++ ++ ++++ S + ++ G ++V + G FNAVFGN++DQ AL R + +L GG +VISHPLGR + RL+ D +VPH LP+R LERL+
Sbjct: 53 RVMDVGSGTGCLIPHMHQTGIQD--ILAVDLAEDLLAKAREQYGTSSTLGNDH------------------------------------GFRTWVGDVESVPAYQ--GPFDVAFFNAVFGNVYDQREALLRTSLLLRPGGHIVISHPLGRAWHERLREGDAEIVPHALPDRPTLERLI 190
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WP52_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 6.500e-10 Identity = 36/67 (53.73%), Postives = 43/67 (64.18%), Query Frame = 1
Query: 652 VVFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELPERDALERLVQ 852
VV N+ F N + Q AL AA L+ GG+ +ISHPLG VS L+ D VVPHELP R L+RLVQ
Sbjct: 203 VVMNSCFANFFSQEEALASAATFLKNGGECIISHPLGEPCVSALRERDAAVVPHELPTRRGLDRLVQ 269
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Match: Riboflavin (kinase n=1 Tax=Chrysocystis fragilis TaxID=1411660 RepID=A0A7S0TD25_9STRA) HSP 1 Score: 69.7 bits (169), Expect = 7.870e-10 Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 1
Query: 655 VFNAVFGNLWDQGAALERAANILEEGGKVVISHPLGRDFVSRLKAVDDTVVPHELP 822
VFNA FGNL+DQ A+L AA ++ GG V+ +HPLG DFV L+A D +VVPH LP
Sbjct: 174 VFNACFGNLFDQRASLAAAAAVVRPGGVVLATHPLGADFVDELRARDASVVPHSLP 229 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6837.14961.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6837.14961.1 >prot_E_fasciculatus_S2_contig6837.14961.1 ID=prot_E_fasciculatus_S2_contig6837.14961.1|Name=mRNA_E_fasciculatus_S2_contig6837.14961.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=284bp MARSAQEAPRRVGRETTLNASAGAGGDDTGEDVRQRAQDMHSTMTSEGKDback to top mRNA from alignment at E_fasciculatus_S2_contig6837:174..4394- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6837.14961.1 ID=mRNA_E_fasciculatus_S2_contig6837.14961.1|Name=mRNA_E_fasciculatus_S2_contig6837.14961.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4221bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6837:174..4394- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6837:174..4394- >mRNA_E_fasciculatus_S2_contig6837.14961.1 ID=mRNA_E_fasciculatus_S2_contig6837.14961.1|Name=mRNA_E_fasciculatus_S2_contig6837.14961.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=852bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6837:174..4394- (Ectocarpus fasciculatus EfasUO2)back to top |