mRNA_E_fasciculatus_S2_contig6825.14950.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Ankyrin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM6_ECTSI) HSP 1 Score: 522 bits (1344), Expect = 1.010e-179 Identity = 384/509 (75.44%), Postives = 396/509 (77.80%), Query Frame = 1
Query: 1 VQRRHVLRGSGETLLLLAASTSSKDGLVRLPYVDTLAPSKPPXXXXXXXXXXXXXXXXXXXXXXXGPWGDWLRIMALCCSCSGGGDGHNDITPALTP--NEETHTAASSSNRCRCPIAAVESFLGNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLVRSTCRDMAEALLSSATRLLGERDWADWLKAPLIGAASQGDLEAVRLLLAAGAGGRGCGRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAXGSVPVGLALARAGAAVRRRAPFRQSALHLAAATGNTGMVHALVSELCLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVDARDECGRTPLFQASKGGGGGGCETIXXXXXXXXXXXXXXXXXXXXXHVACHSGRADAXXXXXXXXXXXXXXXXXXXXXGDVSRREALRAARRRRGFRAAATASGLAGDAARALYRAGQERRRRGRRQLVVERCRRRGTRTGFLGGGIGLRLFELGGRV 1521
++RR LRGSGETLLLLAAST SKDGLVRLPY+DTLAPSK P GPWGDWLRIMALCCSCS GGDGHND TPA + EET TA S RCRCPIA VESFLGN AXXXXXXXXXXXXXXXXXXXXXX YRLVRS CRD AE+LLSSATRLLGERDWADWLKAPLIGAASQGDL+AVRLLLAAGAG GRGIGAWMIPGGEGRTLLHAAASGGSAAVVEAL+DA GSVPV LALA AGAAVRRRAPFRQSALHLAAATGN GMV AL EL LPV+GEDDLGATALHAAAWHGEHAC R LLELGADVDARDECGRTPLFQAS+ G GGGCETI XXXXXXXXXXXXXXXXXXXHVACH G ADAXXXXXXXXXXXXXXXXXXXXXGDVSRREA GLAGDAARALYRAG+ERRR GR Q RR GT G +GG +GLRL ELGGRV
Sbjct: 26 MRRRLALRGSGETLLLLAASTLSKDGLVRLPYLDTLAPSKAPPSQSPPLPAAAASAAA-------GPWGDWLRIMALCCSCSSGGDGHNDFTPAFSAATKEETPTATS---RCRCPIATVESFLGNAAXXXXXXXXXXXXXXXXXXXXXX-----------------YRLVRSACRDTAESLLSSATRLLGERDWADWLKAPLIGAASQGDLDAVRLLLAAGAG----GRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALIDAA--GSVPVALALATAGAAVRRRAPFRQSALHLAAATGNAGMVRALAWELRLPVSGEDDLGATALHAAAWHGEHACARVLLELGADVDARDECGRTPLFQASRRGAGGGCETIREXXXXXXXXXXXXXXXXXXXHVACHCGWADAXXXXXXXXXXXXXXXXXXXXXGDVSRREA----------------PGLAGDAARALYRAGRERRR-GRLQ------RRHGTMAGLVGGELGLRLLELGGRV 478
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K707_9PHAE) HSP 1 Score: 471 bits (1212), Expect = 3.640e-155 Identity = 369/480 (76.88%), Postives = 380/480 (79.17%), Query Frame = 1
Query: 1 VQRRHVLRGSGETLLLLAASTSSKDGLVRLPYVDTLAPSKPPXXXXXXXXXXXXXXXXXXXXXXXGPWGDWLRIMALCCSCSGGGDGHNDITPALTP--NEETHTAASSSNRCRCPIAAVESFLGNTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLVRSTCRDMAEALLSSATRLLGERDWADWLKAPLIGAASQGDLEAVRLLLAAGAGGRGCGRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAX--------------------------GSVPVGLALARAGAAVRRRAPFRQSALHLAAATGNTGMVHALVSELCLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVDARDECGRTPLFQASKGGG---GGGCETIXXXXXXXXXXXXXXXXXXXXXHVACHSGRADAXXXXXXXXXXXXXXXXXXXXXGDVSRREALRAARRRR-GFRAA 1344
++RR LRGSGETLLLLAAST SKDGL+RLPY+DTLAPSK P XXXXXXXXXX GPWG+WLRIMALCCSCS GGDGHNDITPA + NEET+TA S RC CPIA VESFLGN AXXXXXXXXXXXXXXXXXXXXXXXX YRL+R CRDMAE+LLSSATRLLGERDWADWLKAPLIGAASQGDL+AVRLLLAAGAGGR GRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGA GSVPV ARAGAAVRRRAPFRQSALHLAAATG T MV ALV EL LPVAGEDDLGATALHAAAWHGEHACVRALLELGADV+ARD CGRTPLFQASK GG GGGCETIXXXXXXXXXXXXXXXXXXXXX G ADA XXXXXXXXXXXXXXXXXXXGDVSRREALRAARRRR GFR A
Sbjct: 59 MRRRLALRGSGETLLLLAASTLSKDGLIRLPYLDTLAPSKTPPSQSXXXXXXXXXXA--------GPWGEWLRIMALCCSCSSGGDGHNDITPAFSAATNEETYTATS---RCHCPIATVESFLGNAAXXXXXXXXXXXXXXXXXXXXXXXXQ--------------YRLIRLACRDMAESLLSSATRLLGERDWADWLKAPLIGAASQGDLDAVRLLLAAGAGGRS-GRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAGVVVNVVARGCLRTRDGFSPFHVAAIEGSVPVAXXXARAGAAVRRRAPFRQSALHLAAATGKTWMVRALVWELRLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVNARDGCGRTPLFQASKCGGRNGGGGCETIXXXXXXXXXXXXXXXXXXXXXXXXXXXGWADAVRXXXXXXXXXXXXXXXXXXXGDVSRREALRAARRRRKGFRTA 512
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Uncharacterized (protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6NXX0_PEROL) HSP 1 Score: 55.1 bits (131), Expect = 3.210e-5 Identity = 32/75 (42.67%), Postives = 44/75 (58.67%), Query Frame = 1
Query: 865 QSALHLAAATGNTGMVHALVSELCLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVDARDECGRTPLFQAS 1089
QS +H+AAA G+T M+ L C P +G T LH A +G VRAL++ GA+++A+D G TPL AS
Sbjct: 70 QSCMHVAAAYGSTEMIEWLSDSGCNPSEALAQVGLTPLHIAVLNGRPDTVRALIKAGANINAKDSSGMTPLSCAS 144
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Hypothetical (protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A6U0I3R1_MICPS) HSP 1 Score: 56.6 bits (135), Expect = 3.520e-5 Identity = 49/128 (38.28%), Postives = 63/128 (49.22%), Query Frame = 1
Query: 715 EGRTLLHAAASGGSAAVVEALLDAGAXGSVPVGLALARAGAAVRRRAPFRQSALHLAAATGNTGMVHALVSELCLPVAGEDDLGATALHAAAWHGEHACVRALLELGADVDARDECGRTPLFQASKGG 1098
+G T LH AA G V+EALL GA V Q+AL LAA+ G+ V+AL+ + +D+ G TALH AA E + L+ LGAD DAR++ G TPL AS G
Sbjct: 41 DGATPLHHAAEEGDDVVIEALLAIGAD---------------VDEVDSEGQTALMLAASWGHPSSVNALIRVGNASINLKDEGGDTALHEAARANELETLSQLISLGADKDARNKLGATPLLLASHAG 153
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRS0_ECTSI) HSP 1 Score: 57.4 bits (137), Expect = 3.920e-5 Identity = 63/166 (37.95%), Postives = 78/166 (46.99%), Query Frame = 1
Query: 571 RDWADWLKAPLIGAASQGDLEAVRLLLAAGAGGRGCGRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAXGSV-PVGLALARAGAAVRRRAPFRQSALHLAAATGNTGMVHAL---VSELCLPVA---GEDDLGATALHAAAWHGEHACVRALLELGADVD 1047
+ W +WL+ PL AA++G+L V LL AGA G RG RTL+ AAA GGS VV ALL AGA V V ++ ++SAL+ A G+ L VS L L A +D GAT L A G + V LL GADVD
Sbjct: 28 QQWKEWLRVPLEHAAARGNLNLVNSLLEAGADGSAGWRGC--------LDRTLIDAAALGGSEPVVSALLRAGAQPDVNTVSIS-------------SKRSALYTATVCGHEHAARGLDRIVSALLLRGAYTDAQDTSGATPLIYACGSGHLSVVNTLLAAGADVD 172
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Match: Similar (to ankyrin 2,3/unc44, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPN3_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 4.850e-5 Identity = 38/74 (51.35%), Postives = 48/74 (64.86%), Query Frame = 1
Query: 577 WADWLKAPLIGAASQGDLEAVRLLLAAGAGGRGCGRGIGAWMIPGGEGRTLLHAAASGGSAAVVEALLDAGAXG 798
WA+WL+APL AA+ D + V+ LL AGA G W+ G +G+TLLHAAA GG+A V+ ALL AGA G
Sbjct: 34 WAEWLRAPLEHAAATADHDLVKKLLNAGA------NGSTGWV--GCDGKTLLHAAAEGGNAQVIMALLRAGAAG 99 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6825.14950.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6825.14950.1 >prot_E_fasciculatus_S2_contig6825.14950.1 ID=prot_E_fasciculatus_S2_contig6825.14950.1|Name=mRNA_E_fasciculatus_S2_contig6825.14950.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=507bp VQRRHVLRGSGETLLLLAASTSSKDGLVRLPYVDTLAPSKPPPPPSQSQSback to top mRNA from alignment at E_fasciculatus_S2_contig6825:5375..7152- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6825.14950.1 ID=mRNA_E_fasciculatus_S2_contig6825.14950.1|Name=mRNA_E_fasciculatus_S2_contig6825.14950.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1778bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6825:5375..7152- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6825:5375..7152- >mRNA_E_fasciculatus_S2_contig6825.14950.1 ID=mRNA_E_fasciculatus_S2_contig6825.14950.1|Name=mRNA_E_fasciculatus_S2_contig6825.14950.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1521bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6825:5375..7152- (Ectocarpus fasciculatus EfasUO2)back to top |