mRNA_E_fasciculatus_S2_contig681.14934.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMM8_ECTSI) HSP 1 Score: 621 bits (1601), Expect = 6.200e-221 Identity = 336/415 (80.96%), Postives = 352/415 (84.82%), Query Frame = 1
Query: 25 VRRAQCPLLXXXXXXXXXXXXXXXXXXXXXXITAVSTVQTTGSPRQPCRRQRHTHGEPRGGASDGGDGGVAAPNNLLEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQGAGSAGSPVVQMPRGSGAASKLEGHERIAVDTGRRLLEVVPGRVCTQLDIRCTDTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALEAAAAK 1269
VRRA+CP L IT ST QTTGSP+QPCR Q H HGEPR AS+ GD GV APNNLLEQVQRRTTVWADTADLSTVEQLN DLGLVDVTTNPSIVAATALQGAGSAGS +VQ P GSGAASKLE HERIAVD GRRLL+VVPGRVCTQLDIRCTD E+MVKKARGLV YSEAG+PRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAA+ET GGAPA GTAN P CA +DPGV LTTDLKDYFV+HGLPTEVMGASFR+ADQVEALAGCDHLTIAPRLITEMA+LPPR GVP SGN+ EQETR PSEPM+G+PSK DE+SFLAAL RDTCGTEVLRSSVEGFARDT ALEAA AK
Sbjct: 8 VRRAKCPQLLLLLLPLLLPLATGFASSRWL-ITGASTAQTTGSPQQPCR-QSHIHGEPRR-ASNRGDSGVTAPNNLLEQVQRRTTVWADTADLSTVEQLNHDLGLVDVTTNPSIVAATALQGAGSAGSLLVQTPSGSGAASKLESHERIAVDIGRRLLQVVPGRVCTQLDIRCTDAENMVKKARGLVSTYSEAGIPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAASETTGGAPAPPGTANAPASCASEDPGVTLTTDLKDYFVSHGLPTEVMGASFRSADQVEALAGCDHLTIAPRLITEMARLPPRVGTAGVPTSGNMPPEQETRRPSEPMNGNPSKPDEESFLAALGRDTCGTEVLRSSVEGFARDTAALEAAVAK 419
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: transaldolase (n=1 Tax=Cochlodiniinecator piscidefendens TaxID=2715756 RepID=UPI00140BD106) HSP 1 Score: 211 bits (536), Expect = 2.130e-61 Identity = 136/345 (39.42%), Postives = 201/345 (58.26%), Query Frame = 1
Query: 247 NLLEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIV--AATALQGAGSAGSPVVQMPRGSGAASKL--EGHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEM----AQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALE 1254
++L+Q++ TTV ADT D++ +++LN +D TTNPS++ AA + A + + ++ RG + +++ E ++I V G ++++VPGRV ++D R + DT++ + KAR ++ + EAGV ++R+LIK ATW GIRA E LE EGI C +TL+ Q +A+AEAGA +I+ +VGR+ DW KKA P T TA T DPGV+ T + +YF HG T VMGASFRN +++ALAGCD+LTI P L+ E+ A+LP G +EQE KLDE++F A++ D TE L + GFA D+ LE
Sbjct: 5 SVLDQLRDMTTVVADTGDIAAIQRLNP----IDATTNPSLILKAAQMPEYADLIAAAIARVERGDKSEAEVISEAIDQIGVGFGSEIVKLVPGRVSIEVDARLSFDTDATIAKARNIISLFKEAGVEKDRLLIKIAATWEGIRAAEVLEAEGINCNLTLIFGFAQARASAEAGAYLISPFVGRILDWFKKAN--------PGTEYTAET-------DPGVVSVTSIYNYFKTHGFNTIVMGASFRNTGEIKALAGCDNLTIGPALLDELEAEIAELPRALTDNG------ATSEQEP------------KLDEKAFRWAMNDDAMATEKLAEGIRGFAADSEKLE 312
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=1 Tax=Pseudomonas guangdongensis TaxID=1245526 RepID=A0A1H2HFW1_9PSED) HSP 1 Score: 207 bits (528), Expect = 2.380e-60 Identity = 139/342 (40.64%), Postives = 189/342 (55.26%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIV--AATALQGAGSAGSPVVQMPRGSGAASKLEGHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMA----QLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALEA 1257
LEQ++ TTV ADT D+ + +L VD TTNPS++ AA + AG + + + G A +R AV GR +L++VPGRV T++D R + D+ + ++AR L+G Y +AG+ RERVLIK ATW GIRA E+LER+GI+ +TL+ S Q QA A+AG +I+ +VGR+ DWHKKA + G +DPGV T + DY+ A+G T VMGASFRN Q+E LAGCD LTI+P L+ ++A +LP R P G +E+ LDE F L+ D TE L + FARD LEA
Sbjct: 5 LEQLKLYTTVVADTGDVEAIARLQP----VDATTNPSLLLKAAALPRYAGQLQAAIASAGQDLGLAC-----DRFAVAVGREILQIVPGRVSTEVDSRLSFDSAATAERARRLIGLYEQAGIGRERVLIKVAATWEGIRAAEQLERQGIQTNLTLLFSFAQAQACADAGVFLISPFVGRIYDWHKKAKGRDFAGA----------------EDPGVRSVTRIYDYYKANGYGTVVMGASFRNIGQIEQLAGCDRLTISPELLQQLADAEGELPRRLAP------GTAGEPRES-------------LDESGFRWRLNEDAMATEKLAEGIRLFARDQEKLEA 302
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=3 Tax=Microvirga TaxID=186650 RepID=A0A5P9JR96_9HYPH) HSP 1 Score: 207 bits (526), Expect = 7.280e-60 Identity = 141/343 (41.11%), Postives = 189/343 (55.10%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQGAGSAGSPVVQMPRGSGAASKLEGH-----ERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMA----QLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTAL 1251
LEQ++ T V ADT DL V +L D TTNP+++ A++ A + G EG +R+AV G L +VPGRV T++D + DT + V+KAR +VGAY E G+ RER+LIK +TW GIRA E L++EGI C +TL+ S+VQ QA AEAG +I+ +VGR+ DWH K GG P T T DPGV+ + + + A G+PT VMGASFRN ++EALAGCD LTI+P L+ E+A +LP R P GV R P+ P +LDE+SF AL+ D TE L + F +D +L
Sbjct: 5 LEQLRSMTVVVADTGDLDAVRRLKPQ----DCTTNPTLLLK-AVENPAYAAIVEEALAWGRSQGGSREGAVAAICDRLAVAFGAELARLVPGRVSTEVDADLSFDTAATVEKARAIVGAYKERGIGRERILIKIASTWEGIRAAEILQKEGIDCNLTLLFSQVQAQACAEAGVFLISPFVGRILDWHVK------NGGGPYTGET----------DPGVLSVRRIYESYKAQGIPTVVMGASFRNIGEIEALAGCDRLTISPALLDELAKAEGELPRRLSPDGV-----------ARIPA------PQRLDEKSFRFALNEDAMATEKLAEGIRSFVKDLRSL 309
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=2 Tax=Pseudomonas TaxID=286 RepID=A0A7D5ERE1_9PSED) HSP 1 Score: 206 bits (523), Expect = 1.320e-59 Identity = 134/339 (39.53%), Postives = 187/339 (55.16%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQGAGSAGSPVVQMPRGSGAASKLE---GHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALEA 1257
L+Q+++ TTV ADT DL + +L VD TTNPS++ A + RG+ AAS + +R AV G+ +L+V+PGR+ T++D R + DT++ +++A L+ Y +AG+ RERVLIK ATW GIRA E+LE+ GI+C +TL+ + Q QA AEAG +I+ +VGR+ DW+KK+ + +G +DPGV T + DY+ A+G T VMGASFRN Q+E LAGCD LTI+P L+ ++A P SG AE LDE F AL+ D TE L + FARD LEA
Sbjct: 5 LDQLKQFTTVVADTGDLDAIARLKP----VDATTNPSLLLKAAAM------PRYADLLRGAVAASNGDLGLACDRFAVAVGQEILKVIPGRISTEVDARLSFDTQATLRRAERLIELYEQAGIGRERVLIKIAATWEGIRAAEQLEKAGIQCNLTLLFAFAQAQACAEAGVFLISPFVGRIYDWYKKSEGRDFVGA----------------EDPGVQSVTRIYDYYKANGYSTVVMGASFRNLGQIEQLAGCDRLTISPDLLQQLAD---EQSPLERKLSGGKPAEARQ------------SLDESQFRWALNEDAMATEKLAEGIRLFARDQEKLEA 302
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=5 Tax=unclassified Bacteroidetes TaxID=37452 RepID=A0A1F3M598_9BACT) HSP 1 Score: 205 bits (522), Expect = 2.620e-59 Identity = 135/342 (39.47%), Postives = 193/342 (56.43%), Query Frame = 1
Query: 247 NLLEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQGAGSAG----SPVVQMPRGSGAASKLE-GHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALE 1254
N LEQ+++ T V ADT D ++ Q VD TTNPS++ A+A Q A AG + SG A++L +++AV+ G +L++VPGRV T++D R + +TE + KAR L+ Y++AG+P+ER+LIK +TW GI+A E LE+EGI C +TL+ S++Q A AEAGA +I+ +VGR+ DWHKK + I PAT +DPGV+ T++ Y+ G PTEVMGASFRN ++ LAGCD LTIAP L+ E+ ++ P + + + A E DE +F L+ D TE L + F D LE
Sbjct: 3 NALEQLKKYTRVVADTGDFESMRQYLP----VDATTNPSLIYASA-QDARYAGLVDEAIAYAKANASGEANQLALCLDKLAVNFGLEILKIVPGRVSTEVDARLSFNTEESIAKARQLIKLYADAGIPKERILIKVASTWEGIKAAEVLEKEGIHCNLTLLFSKIQAVACAEAGAQLISPFVGRILDWHKKDRNVDQI---PAT------------EDPGVLSVTEIFHYYKKFGYPTEVMGASFRNTGEIMELAGCDLLTIAPSLLGELEKMENTELPKKLDETKSAAMNMEKM-----------HADEATFRWLLNEDAMATEKLAEGIRKFTADLIKLE 313
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: transaldolase (n=1 Tax=Bartonella sp. HY038 TaxID=2759660 RepID=UPI0015F82F6C) HSP 1 Score: 202 bits (515), Expect = 2.700e-58 Identity = 135/342 (39.47%), Postives = 189/342 (55.26%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVA-ATALQGAGSAGSPVVQMPRGSGAASKL---EGHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQ----LPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTAL 1251
LEQ++ TTV ADT D+ V +L D TTNP+IV A SA S V +G + + +R+A+ G L+ +VPGRV T++D + DTE+ VKKA ++ AY E G+ RER+LIK +TW GIRA E L++EGI C +TL+ S+ Q A A+AGA +I+ +VGR+ DW+KK+ + TA T DPGV+ + +Y+ A+G+ T VMGASFRNA ++EALAGCD LTI+P L+ E+A LP + P V A P +DE++F ++ D E L + GFA+D TAL
Sbjct: 5 LEQLRAMTTVVADTGDIDAVIRLKP----TDCTTNPTIVLKALGTPMFSSAVSEAVSWGKGQNGSREAIISAIADRLAISVGAALVNIVPGRVSTEVDADLSFDTEASVKKAHNIIAAYKERGIDRERILIKLASTWEGIRAAEILQKEGIDCNLTLLFSKAQAIACADAGAFLISPFVGRILDWYKKSTGLDY---------TAET-------DPGVLSVRSIYNYYKANGIKTIVMGASFRNAGEIEALAGCDRLTISPALLDELANDNGALPRQLSPETVTAEA------------------PIHMDEKTFRWMMNEDVMAAEKLSEGIRGFAKDLTAL 308
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A0A2L0EMX2_SORCE) HSP 1 Score: 203 bits (516), Expect = 2.850e-58 Identity = 134/349 (38.40%), Postives = 196/349 (56.16%), Query Frame = 1
Query: 232 VAAPNNLLEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQG------AGSAGSPVVQMPRGSGAASKLE-GHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALE 1254
A NLLE+++ T V ADT D++++E+ D TTNPS++ A A G+ + +GS A+ + +R+AVD G R+L +VPGRV T++D R + DT++ V+K R ++ Y EAG RERVLIK +TW GIRA E LE+EGI C +TL+ Q A AEAGA++I+ +VGR+ DW+ K ++ APA +DPGV+ T + +Y+ HG TEVMGASFRN D+++ LAGCD LTIAP+L+ E+A A G + + + + + M+ +DE +F A + D E L ++GFA+ LE
Sbjct: 2 AAMDQNLLERLKAYTVVVADTGDINSIEKYRPQ----DATTNPSLITAAAQMSEYADIVGGALAWARKEAGQGSDPAAVVNLAFDRLAVDFGLRILAIVPGRVSTEVDARLSYDTQATVEKGRRIIRLYEEAGASRERVLIKIASTWEGIRAAEILEKEGIHCNLTLLFGLHQAIACAEAGATLISPFVGRILDWYLKDTGRKSY--APA-------------EDPGVVSVTRIYNYYKHHGYKTEVMGASFRNLDEIKELAGCDLLTIAPKLLAELAS-----------ARGELPRKLDPEA-ARSMNIEKIAMDEATFRAMHEADRMANEKLSEGIDGFAKALATLE 319
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: Transaldolase (n=4 Tax=Pseudomonas TaxID=286 RepID=A0A5R9QJ19_9PSED) HSP 1 Score: 202 bits (514), Expect = 2.850e-58 Identity = 133/345 (38.55%), Postives = 185/345 (53.62%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVAATALQGAGSAGSPVVQMPRGS----GAASKLEGH-----ERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQLPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALEA 1257
LEQ+++ TTV ADT DL +E+L VD TTNPS++ A +PR + A + EG + AV G+ +L+++PGR+ T++D R + DTE+M+++A L+G Y +AG+ R+RVLIK +TW GIRA E+LE+ GI+ +TL+ S Q A AEAG +I+ +VGR+ DW+KKA + +G +DPGV + + DY+ HG T VMGASFRN Q+EALAGCD LTI+P L+ ++A PA G A LDE F L+ D TE L + FARD LEA
Sbjct: 5 LEQLKQYTTVVADTGDLDAIERLKP----VDATTNPSLLLKAA------------SLPRYNEHLKAAMGRCEGDIGMACDLFAVAVGQEILKLIPGRISTEVDARLSFDTEAMLQRAERLIGLYEQAGIDRDRVLIKIASTWEGIRAAEQLEKAGIQTNLTLLFSFTQAVACAEAGVFLISPFVGRIYDWYKKAEGRDYVGA----------------EDPGVQSVSRIYDYYKTHGYDTVVMGASFRNIGQIEALAGCDRLTISPELLGQLADEQGTLERKLSPAKGTQAR---------------ISLDESGFRWGLNEDAMATEKLAEGIRQFARDQEKLEA 302
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Match: transaldolase (n=1 Tax=Pseudomonas sp. NW5 TaxID=2934934 RepID=UPI00201FE83C) HSP 1 Score: 202 bits (513), Expect = 3.900e-58 Identity = 142/341 (41.64%), Postives = 187/341 (54.84%), Query Frame = 1
Query: 253 LEQVQRRTTVWADTADLSTVEQLNRDLGLVDVTTNPSIVA-ATALQGAGSAGSPVVQMPRGSGAASKLEGHERIAVDTGRRLLEVVPGRVCTQLDIRCT-DTESMVKKARGLVGAYSEAGVPRERVLIKTPATWAGIRATERLEREGIRCLVTLVCSRVQGQAAAEAGASIIATYVGRVSDWHKKAAAAETIGGAPATRGTANTPDPCAGDDPGVMLTTDLKDYFVAHGLPTEVMGASFRNADQVEALAGCDHLTIAPRLITEMAQ----LPPRACPTGVPASGNVAAEQETRSPSEPMSGHPSKLDEQSFLAALDRDTCGTEVLRSSVEGFARDTTALEA 1257
LEQ+++ TTV ADT D + +L VD TTNPS++ A AL P++ G+ L +R AV GR +L +PGRV T++D R + DT + V +A+ L+G Y++AGV RERVLIK ATW GIRA E+LEREGI+ +TL+ S Q QA A+AGA +I+ +VGR+ DW++KA D A +DPGV T + +Y+ AH T VMGASFRN Q+E LAGCD LTI+P L+ ++AQ LP R P G A +E LDE F L+ D TE L + FARD LEA
Sbjct: 5 LEQLKQYTTVVADTGDFEAIARLQP----VDATTNPSLLLKAAALPRC----QPLLHDAVAHGSDPALA-CDRFAVAVGREILAGIPGRVSTEVDARLSFDTPASVARAQRLIGLYADAGVDRERVLIKIAATWEGIRAAEQLEREGIQTNLTLLFSFAQAQACADAGAFLISPFVGRIYDWYRKAEGR----------------DFSASEDPGVQSVTRIYNYYKAHDYGTVVMGASFRNLGQIEQLAGCDRLTISPDLLEQLAQSQGALPRRLAP------GATAEPRE-------------HLDEPRFRWQLNEDAMATEKLAEGIRSFARDQEKLEA 301 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig681.14934.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig681.14934.1 >prot_E_fasciculatus_S2_contig681.14934.1 ID=prot_E_fasciculatus_S2_contig681.14934.1|Name=mRNA_E_fasciculatus_S2_contig681.14934.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=428bp MPRSLRQRVRRAQCPLLLLLLLLPLLLPPTTGFSSSHWWITAVSTVQTTGback to top mRNA from alignment at E_fasciculatus_S2_contig681:8260..11284- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig681.14934.1 ID=mRNA_E_fasciculatus_S2_contig681.14934.1|Name=mRNA_E_fasciculatus_S2_contig681.14934.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3025bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig681:8260..11284- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig681:8260..11284- >mRNA_E_fasciculatus_S2_contig681.14934.1 ID=mRNA_E_fasciculatus_S2_contig681.14934.1|Name=mRNA_E_fasciculatus_S2_contig681.14934.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1284bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig681:8260..11284- (Ectocarpus fasciculatus EfasUO2)back to top |