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Homology
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTJ8_ECTSI) HSP 1 Score: 410 bits (1054), Expect = 3.070e-133 Identity = 226/267 (84.64%), Postives = 231/267 (86.52%), Query Frame = 1
Query: 445 CRHA---GNKNTALLAPAGPAAGLVVSRRHMSSGTTGGDSS---GRFSEDLEKLISRAGERADRTGKPGKGE-ASAVAVAAPQAGVAGEGAGEGEEEPVLSARAMKFRAMISKLRPQKKAVIVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
CRH G KN AL APAG +AGLVVSRRHMSSGTTG DSS GRFSEDLEKLISRAGERADRTGK GKGE ASAV +P LSARAMKFRAMISKLRPQKK +VKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYT+KLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRK+LKKEGMMERDSRRVERKKPGLKKARKAPQWVKR
Sbjct: 52 CRHVARGGGKNPALPAPAG-SAGLVVSRRHMSSGTTGDDSSSSSGRFSEDLEKLISRAGERADRTGKSGKGEKASAVXXXXXXXXXXXXXXXXXXXDPALSARAMKFRAMISKLRPQKKTAVVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTNKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKMLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 317
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: 30S (ribosomal protein S9 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0D3D9_THETB) HSP 1 Score: 154 bits (388), Expect = 1.400e-38 Identity = 89/177 (50.28%), Postives = 109/177 (61.58%), Query Frame = 1
Query: 709 EEPVLSARAMKFRAMISKLRPQKKAVIVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWIS-----LSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
+E VL+A A K M + Q + KT +D LGR+YG GRRKTS ARVW+ + V +VNS+P+ DYFP H +N +++PL KLG F +R T KGGG GQAGA+RLG+ RALE DP RK LK GMM RD R VERK GL+KAR+APQWVKR
Sbjct: 69 QEHVLAANAKKATEMTAHESEQLERRKAKT--------LDALGRAYGTGRRKTSIARVWVEPVAHPAAPQPADVLVVNSKPLADYFPAMHHRNHVIEPLRLLGKLGAFKIRATVKGGGHTGQAGALRLGICRALEIVDPAFRKPLKAAGMMTRDPRMVERKLAGLRKARRAPQWVKR 237
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JDC3_9STRA) HSP 1 Score: 152 bits (384), Expect = 4.320e-38 Identity = 79/135 (58.52%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWISLSKGE-GGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
+D GR+YG GRRKTSTARVW+ S GG +VN + ++DYF RD + E+LKP K+G F V CT KGGG GQAGA+R G+ARAL+ +DP R LKK G+M RD R VERKKPG KKARK QWVKR
Sbjct: 99 LDEKGRAYGTGRRKTSTARVWVKQSAEPFGGRIVVNKKDVVDYFVRDTHREEVLKPFSVIEKIGGFDVYCTVKGGGMTGQAGAVRHGIARALQNYDPEYRPALKKAGLMTRDPRMVERKKPGQKKARKKFQWVKR 233
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A920_TRICV) HSP 1 Score: 152 bits (385), Expect = 1.460e-37 Identity = 80/140 (57.14%), Postives = 98/140 (70.00%), Query Frame = 1
Query: 805 PSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
P R P +D+ GR+YGLGRRKT+TARVWI G V VN P +DYF R+ L+ +IL P T G F VRC GGG++GQAGA+RLG+ARALE ++P R +K +G+M RD R VERKK G KKARKAPQWV+R
Sbjct: 153 PVRVPQIDDRGRAYGLGRRKTATARVWIYPGSG---VVTVNKMPFVDYFEREALREDILSPFIVTRTCGQFDVRCYCHGGGKSGQAGAVRLGVARALEKYNPEYRPPMKHKGLMTRDPRMVERKKIGKKKARKAPQWVRR 289
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CU54_PYTOL) HSP 1 Score: 152 bits (384), Expect = 5.420e-37 Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWISLS-KGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
VD LGR+YG GRRKTSTARVW+ S K G VN + ++DYF RD + +ILKP ++GNF V CT KGGG +GQAGAIR GL+RAL+ DP R LLKKE ++ RD R VERKKPG KKARK QWVKR
Sbjct: 195 VDELGRAYGTGRRKTSTARVWVKRSDKPFDGRIKVNKKDLVDYFVRDTHREDILKPFSVIDEIGNFDVYCTVKGGGLSGQAGAIRHGLSRALQNFDPNYRPLLKKEKLLTRDPRMVERKKPGQKKARKKFQWVKR 329
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GRK8_HETAK) HSP 1 Score: 147 bits (370), Expect = 3.580e-36 Identity = 81/146 (55.48%), Postives = 102/146 (69.86%), Query Frame = 1
Query: 787 IVKTFTPSREPLVDNLGRSYGLGRRKTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
I+K ++EP +D+ GRSYG GRRK + ARVWI GEG F VNS+PM +YF R Q+++ KP + F V CT +GGG GQAGA+RLGL+RALE ++P+ R LKKEG++ RD+R VERKKPG KKARK QWVKR
Sbjct: 94 ILKPQEITKEPKIDDQGRSYGTGRRKAAIARVWIK--PGEGN-FTVNSKPMPEYFGRAAHQHDVAKPFLASGTAARFDVLCTVQGGGLTGQAGAVRLGLSRALENYNPFNRPSLKKEGLLTRDARVVERKKPGQKKARKRFQWVKR 236
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Mitochondrial/chloroplast (ribosomal protein S9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225UXJ6_9STRA) HSP 1 Score: 147 bits (371), Expect = 2.340e-35 Identity = 76/135 (56.30%), Postives = 94/135 (69.63%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWIS-LSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
+D+ GR+YG GRRKTS ARVW+ ++ G VN + ++DYF RD + E+LKP ++G F V CT KGGG GQAGA+R G+ARAL+A DP LR LKKEG++ RD R VERKKPG KARK QWVKR
Sbjct: 186 LDSKGRAYGTGRRKTSVARVWVKPAAQPFTGRVQVNKKDLVDYFVRDTHREEVLKPFSVVEQIGGFDVYCTVKGGGMTGQAGAVRHGIARALQAFDPELRPALKKEGLLTRDPRMVERKKPGQAKARKKFQWVKR 320
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G743_9STRA) HSP 1 Score: 143 bits (360), Expect = 7.640e-35 Identity = 76/135 (56.30%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWISLSKGE-GGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
VD+LGR+YG GRRKTSTARVWI S GV VN + ++DYF RD + +L P ++G+F V C +GGG +GQAGAIR G++RAL+ DP R LLK+EG + RD R VERKKPG KARK QWVKR
Sbjct: 101 VDDLGRAYGTGRRKTSTARVWIKKSSTPFRGVVRVNKKDVVDYFVRDSNREHVLSPFVAVDQVGHFDVMCNVRGGGLSGQAGAIRHGISRALQNFDPSYRPLLKEEGYLTRDPRMVERKKPGQPKARKKYQWVKR 235
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1S3_9STRA) HSP 1 Score: 145 bits (366), Expect = 1.500e-34 Identity = 75/135 (55.56%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWISLSKGE-GGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
VD GR+YG GRRKTSTARVW+ S GG +N + M+DY RD + ++L+P + GNF V CT KGGG GQAGAIR G++RAL+ DP R LKK+G++ RD R VERKKPG KARK QWVKR
Sbjct: 200 VDEQGRAYGTGRRKTSTARVWVKKSAEPFGGRIKINKKDMVDYLERDTHREDVLRPFSVVGETGNFDVYCTVKGGGLTGQAGAIRHGISRALQNFDPEFRAALKKDGLLTRDPRMVERKKPGQPKARKKYQWVKR 334
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WWB2_9STRA) HSP 1 Score: 142 bits (359), Expect = 2.220e-34 Identity = 75/135 (55.56%), Postives = 93/135 (68.89%), Query Frame = 1
Query: 823 VDNLGRSYGLGRRKTSTARVWISLSKGEG-GVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLGNFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSRRVERKKPGLKKARKAPQWVKR 1224
VD GR+YG GRRKTS+ARVW+ S +G G+ VN ++DYF RD ++EIL+P LGNF V CT +GGG +GQAGA+R G++RALE +P R LK G + RDSR VE KK G KKARK+ QWVKR
Sbjct: 129 VDEFGRAYGTGRRKTSSARVWVKRSATDGQGIIRVNKMDLVDYFARDTNRHEILRPFMEIDHLGNFDVYCTVRGGGLSGQAGAVRHGISRALEKFNPDFRPSLKSVGFLTRDSRMVESKKAGRKKARKSFQWVKR 263
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig68.14922.1 vs.
Analysis Date: 2022-09-19 ( Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
| Match Name | E-value | Identity | Description | |
|---|
| Uncharacterized | 3.070e-133 | 84.64 | protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTJ8... | [more] |
| 30S | 1.400e-38 | 50.28 | ribosomal protein S9 n=1 Tax=Thecamonas trahens AT... | [more] |
| Uncharacterized | 4.320e-38 | 58.52 | protein n=3 Tax=Phytophthora kernoviae TaxID=32545... | [more] |
| Hypothetical | 1.460e-37 | 57.14 | protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... | [more] |
| Uncharacterized | 5.420e-37 | 60.74 | protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... | [more] |
| Hypothetical | 3.580e-36 | 55.48 | protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... | [more] |
| Mitochondrial/chloroplast | 2.340e-35 | 56.30 | ribosomal protein S9 n=1 Tax=Phytophthora megakary... | [more] |
| Uncharacterized | 7.640e-35 | 56.30 | protein n=1 Tax=Albugo candida TaxID=65357 RepID=A... | [more] |
| Uncharacterized | 1.500e-34 | 55.56 | protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... | [more] |
| Uncharacterized | 2.220e-34 | 55.56 | protein n=1 Tax=Aphanomyces euteiches TaxID=100861... | [more] |
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 415.6 |
| Seed ortholog evalue | 2.1e-113 |
| Seed eggNOG ortholog | 2880.D7FTJ8 |
| Preferred name | MRPS9 |
| Model size | 2686 |
| KEGG ko | ko:K02996 |
| KEGG Pathway | ko03010,map03010 |
| KEGG Module | M00178,M00179 |
| Hectar predicted targeting category | mitochondrion |
| GOs | GO:0000313,GO:0000314,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005761,GO:0005763,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009553,GO:0009555,GO:0009559,GO:0009561,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0030154,GO:0030490,GO:0031974,GO:0032501,GO:0032502,GO:0032543,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048229,GO:0048856,GO:0048869,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0098798,GO:0140053,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 |
| Exons | 4 |
| EggNOG free text desc. | structural constituent of ribosome |
| EggNOG OGs | COG0103@1,KOG1697@2759 |
| Ec32 ortholog description | Ribosomal protein S9 |
| Ec32 ortholog | Ec-13_004660.1 |
| Cds size | 966 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842336.8801126-UTR-E_fasciculatus_S2_contig68:10807..12266 | 1696842336.8801126-UTR-E_fasciculatus_S2_contig68:10807..12266 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig68 10808..12266 - |
| 1696842336.943885-UTR-E_fasciculatus_S2_contig68:18786..19047 | 1696842336.943885-UTR-E_fasciculatus_S2_contig68:18786..19047 | Ectocarpus fasciculatus EfasUO2 | UTR | E_fasciculatus_S2_contig68 18787..19047 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842336.8983564-CDS-E_fasciculatus_S2_contig68:12266..12358 | 1696842336.8983564-CDS-E_fasciculatus_S2_contig68:12266..12358 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig68 12267..12358 - |
| 1696842336.9087427-CDS-E_fasciculatus_S2_contig68:13279..13439 | 1696842336.9087427-CDS-E_fasciculatus_S2_contig68:13279..13439 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig68 13280..13439 - |
| 1696842336.9203947-CDS-E_fasciculatus_S2_contig68:14722..14902 | 1696842336.9203947-CDS-E_fasciculatus_S2_contig68:14722..14902 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig68 14723..14902 - |
| 1696842336.933561-CDS-E_fasciculatus_S2_contig68:18252..18786 | 1696842336.933561-CDS-E_fasciculatus_S2_contig68:18252..18786 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig68 18253..18786 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig68.14922.1 >prot_E_fasciculatus_S2_contig68.14922.1 ID=prot_E_fasciculatus_S2_contig68.14922.1|Name=mRNA_E_fasciculatus_S2_contig68.14922.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=322bp
MASRATTTTAAMKHPFVRRVMMAAATTASRGGGGGGGGSRAALHASSSQA
GGPASARTTAACRHAGNKNTALLAPAGPAAGLVVSRRHMSSGTTGGDSSG
RFSEDLEKLISRAGERADRTGKPGKGEASAVAVAAPQAGVAGEGAGEGEE
EPVLSARAMKFRAMISKLRPQKKAVIVKTFTPSREPLVDNLGRSYGLGRR
KTSTARVWISLSKGEGGVFMVNSRPMIDYFPRDHLQNEILKPLEYTSKLG
NFHVRCTAKGGGQAGQAGAIRLGLARALEAHDPWLRKLLKKEGMMERDSR
RVERKKPGLKKARKAPQWVKR* back to topmRNA from alignment at E_fasciculatus_S2_contig68:10808..19047- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig68.14922.1 ID=mRNA_E_fasciculatus_S2_contig68.14922.1|Name=mRNA_E_fasciculatus_S2_contig68.14922.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8240bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig68:10808..19047- (Ectocarpus fasciculatus EfasUO2)
CTCACGTCGAGTGGTTGAGCGCCAGGGTGCTTAAGGCGGGGGGCACCAGG
AGACGCGTGGTTGGTCCTCCTTTCTCTCTGCGACCATCTCGTTCTCTGCG
GAGTGAGGTGGCGACCTTGCACGGCCGTCCTCCTCGAGACAGCCAGGAGC
AAAAGACAGACAGAGAGCCACACCGCCGCAATAAGTGCTGCGACGGCTGC
AGACTAGACTACACCGCACTCGGGCAGCAGGCACGGAAGGAGGAAGGAGA
GGAGCAGCAGCATGGCAAGCCGCGCAACGACAACGACGGCTGCAATGAAG
CACCCGTTCGTCCGGCGCGTGATGATGGCGGCAGCGACAACCGCCTCTCG
CGGCGGCGGCGGCGGCGGCGGCGGCAGCAGGGCGGCCCTCCACGCCTCGT
CCTCTCAGGCAGGCGGGCCAGCATCAGCAAGAACTACTGCTGCCTGCCGT
CATGCCGGCAACAAGAACACGGCGTTGCTTGCCCCTGCTGGGCCTGCTGC
TGGGCTGGTAGTCTCTCGAAGGCATATGTCCTCTGGCACAACGGGAGGTG
ATAGCAGCGGGAGGTTCAGCGAGGATCTGGAGAAGCTCATCTCCAGGGCG
GGCGAGCGGGCCGATCGCACGGGCAAGCCGGGCAAGGGCGAAGCCTCTGC
TGTTGCGGTTGCTGCGCCTCAGGCTGGCGTTGCTGGCGAGGGGGCAGGGG
AGGGGGAGGAGGAACCGGTGCTGTCTGCACGTGCGATGAAGTTCCGGGCC
ATGATCAGCAAGCTCAGGCCCCAGAAGAAAGCTGTCATTGTCAAGGTATC
GTGCTGTCGTGCTGTCTCCAAAAGCAGTAGATATTCTTATCGCCGTAGGT
GATGGAAGATACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCACTTCCACCCACCGAACAACA
ACACCAACCACGCATACACNNNNNNNNNNCCCCAAAAAAAGCGGTGTTTG
TTAATGTATTGGTCTTGTGTGCTTTCCCCCAAAAAAGGAAAATTTTTTAT
CCCCGTGGGTTGGGGAAGATACCCCCCCCCCCCCCCCCCGCCCATCCCGC
CCCCGCCCATCCTCCACCCTCCACCCACGGTCGTATGTATGCATACGCAT
ACAGTTAACGGGGCGCCTGCTGACGAGTGACATGGCTCCCACAATAAACT
CCCTTGTCTCCTGTTTTTCATGGCGACGCTTGCTTTGCTTTGTTTGGGAG
AGAGGGAGAGGCAGGATGTTGCTCGTCATCTGCGTACCGCAAAAGGATGC
GTGAGAACGCACGGGGATGGATCGATTTTTAAAATGACCCATGATTTGGT
TCATGAGTTTTTGTCGTGTGATACCCGCCCCGTGCGATAATCGAATTAGA
TGGTATTGTTCTTGATTACTCATCGCACGGAGGGCGCGATATCACCCCTA
CAGTACGTACGTGAGATGCTGAATAACCAATATAAACCCTACAGCAGCAT
TTCCCCCTATTTAGTCCCGTGGCATTGCCCGTGGGTGCTGTGCCCAATGA
TGATCGCTTCTGACTCCTAGTTTCTTGACGTATTTTCCAGCGTTCTCAAT
ATGTGATGCGTGATGCCGCCTTACGTACACCGAACCCCGTGCGATAATCG
AACTATTATATATCACTCTGTTCCTGTTTTTTTTTCGAGTATCGCATATG
TAACGAGCGACACACATGCACAGCGGGCGACAGCATCTGGGCCCGATGAC
GCTGGTGTCTCCGTGGTGTAAAGTTGTTGTCTCCGTCATGTGATGCTGTT
GCTGTCGCGCAGGTTTTGTTTTGTTGACCTGCCGTGTTCAACTGCCAGCA
AACGATGAATGAGCACATGATGAGCACAGCACACGTCAGTTCTCGAAACC
CAGATAACGCCAATCGCCATCGCACCACTTCGAGTATGTGCTCCGTTGTG
GTATCTCTGAGCGCGACAGTTGTGTCGGGCATGGGTCCTGTGTGTGGCGA
GAGCATCGTGCCGATGTGAGAAGGTTTGGCGCTTTCGCCTGTAATAATGT
CGACTGCTGCTGCTGCTGCTGCTGCTGTGCAGGGGCAAAGAAATGGCGGA
TTAAAAAAAAAAAAAAAAAATCCACGCCGCGACAAACGTCTTCCCACACA
CAGCGCCCATGCTCAACACAACTGTCACGCCCCGAGAAATCGCAATGGAG
CACACGCTCGAAGTGGTGCCATGACGATTGGTGCGCTGGGTGACGAGAAC
TGATTTGTGTAGCTACAGCAGTGTAGCTGATTTCGCTGGCACAGCTAGGC
AGTTGGGAAAAAAAAACAGAAACAGGGGCCTTCTATCAGCTGTCGCTCGT
TTTAGCGACAGCTACTATATCTTCGCACGGGGGTACGATATCACCGGCAC
GTGCGACATCACCGAACCGTGCGTCCTCTCGAATCCTTACGGATAATACT
GCCTATTTCCTTTGTACTTTGTCCATGCACAACGATTTTGTCCATTCACG
TTTTGTGCGACAACTTTTTATTTAAAGAAGAGTATTTGAAACGCGAAACA
ACGATATATATTCGTGATCGCCTCGTTGAGCTATGTATGCATACGTCGAT
AGCTGTAGAGTTTTTCCATTTATAAAAATGCGATTTATTTCGGCAACATA
TTCACGGAACCATGGTACGTAGGAGCGTTCTGCGAAAAGTTTCTACTTTC
TAGACTCTTCCATGCAGAATACAGACAGAGTTCGCGCCTGCACAAGATTT
GAGTTACGAAATTCAGGTTTGACACAAGACAAGAGTTTAAGAACTTGGCC
ATGAGAACGTGTGCTCAGCCGAGAAGCTTCCACTAAAACCTAAGATACTC
CCACAACAATCGGGGTGCGGAAACACCCTGAACACGCAGACGGAAGGCCG
GCCCCTCACGAAATGTTTCCAAAACCACATGCATTGGTGTTGGCACAAGC
TTGGTTGTCGAGTGGAGTCATCGAGTTTATCGTGGTCGCTGTCAGGGTAC
AACATTGAGAAATAAGCAACGATAAGAGCCTCGGGCAAAATAAGATAAGA
GGTTCTTGAGTTCCGTTTGAGGCTTCAGAGGGGTACTGTACCGAAGGAGG
CGGAGAGATGGCACTCTGTCCTATAAATAGACCGATTTTCAGAACTCGAT
GACTCCACTCGACAACCAAGCTTGTGCCAACACCAATGCATGTGGTTTCG
GAAACATTTCGTGAGGGGCCGGCCTTCCGTCTGCGTGTTCAGGTGTTTCC
GCACCCCGATTTTTGTGGGAGTATTTAAGGTTTTAGTGGAAGCTTCTCGG
CTGAGCACACGTTCTCATGGCCAAGTTATAAACCCGTATCTTTGTTCCGA
ACCTGAATTTCTTAACTCCAACCTTCAGTGCAGGAGTAGGCTTTCGTGAA
ATCCGGTCTTCGGGGAATGTTAGTTATCTCTCCGCCTCTTACGGTGCCTG
GCCTTCGCCTGTTGTATCTACACCAGACACTATTTTTTTTTCCCCCACTC
CATCCACCACAGGCAAACACGCCTTCATTTACCATCACATTCATCCGCCG
CACACGACAGCAGCAGCAGCAGCAGCAGTCCTCTTATCTTGATCACATTC
GTGCTGATGTTTTTGTTCGGTCTTGTGCCTCTTCGGCGCTTTTATTTGCC
TGCCTTGTGTCGGTTCGTTCGCACGTGAACGCTGCTGCGACGCCGTTACC
TTCTACCGAAACACCGCCCACAGATTACAGCAAACGACATTTTCTGTTGC
CAGCATTTATATGTACATACCCGCAGGCAGGAGTCCTCCAGTCACGATTG
CTGCATGCGCTTTGACGGTTTCACGCCGTTTTCGGCCTCTCTTGTGCCGT
TTCGTGTTTTCCACGTGAGCGCTGCCCAGACCTGTACTCGATAGGCTCCT
TTTATTTCTGAATATTTATCACAAAATCCATCTATATCCATAATAGAAAG
GATCCAAGATTATCGGTGATAAACTCATAGCGTTAGCGGGGTGCGGTTAG
AGACACTACATTTTCTTCCACTCCACATATTTTCAGTAAAACAACCCAAA
TCGACAACAAAAAAGTCTAGAGCAAAAGCCTATCCGAGTACAGGTCTAAC
GCTGGCGCTGCTACCTACCCCTCTTCTTTGTTCTCTCTTTTTCAGACGTT
CACGCCCTCGAGGGAACCTTTAGTGGATAACTTGGGCCGCTCTTACGGCC
TAGGAAGGCGCAAGACCAGCACGGCCAGGGTGTGGATCTCTCTCTCCAAG
GGCGAGGGAGGCGTGTTCATGGTCAACTCGAGGCCCATGATCGACTACTT
CCCCCGAGACCACCTTCAGAACGAGGTAGGGTAGGTAACGGCTCTCCTCT
TTCGTCGTCTTCGTCAGCTGTGTTTGGTGCTTGAGTTAGTAGCACTGTCG
CTCTCGTCTTACTCTCCTCTTTTGTCGTCTTTGTCAGCTGTGTTTGGTGC
TTCAGTTATTAATAGTAGCACTGTCGCTCTCGTCTTAGTCAGCTGTGCTT
TTTACTTCAGTTATTAATAGTAGCACTGTCGCTCTCGTCTTAGTCAGCTG
TGCTTTTTTGCTTAGCTGTCGCTCTCGTCTTATTCAGCTGTGCTTATTGC
TTAATTTACTACCACCACAGTTTTTTCTGTAGCTGTCGCCTTCGTCTTGC
TATGTCAGCTTCGGATCGCGCTTGATTTAGGAGCACCACACTTTCTTCTG
TAGCTGTTGCCTTCGTCTTGCTATGTCAGCTTCGGATCGCGCTTGATTTA
GAAGCACCACACTTTCTTTCTGTAGCTGTCGCCTTCGTCTTGCTGTACAA
AAGTCAGCTTCGGATCGCGCTTAATTTGGAGCACCACACTTTTTGTCTGT
AGTTGTCGCTCTCGTCTTAGGTCGTGTGTGTTTTGAGCTTGAGTACCACC
ATACCCTTTTTGTGCTTTAATCGTAAGTCGGCTGTATTTTGGGTTTGATT
GAGTGGCGCCACGGTCGCTTTCTTCTTTGTCCGCTGTGTTTTGTGCTTGA
TAGAGCCGCACCACACTTTTTTCTGTAGCTGTGGCTCTTTTCTTTTGTCT
TACATCAACCGTGTCGTGTCAATGCAGCAGCGGCCACGGTTCAAGAGAGA
TCTTCAAGAGAAATCGGATTGTTCAGGATTGTTTTCGGCTTGCCCCGATC
CTCCCTTGACTTTACTCGGCAGGAGAGACAGCGGTGGCGGTGTCAAAAGG
GGTGACGTTGGAACGTTCTCTTCGAAAAAATTCCGAGAACTTTCCGAAAA
AATTCCGAGAACTTTCCGAAAACGTATCATTTGATTTCGACATCCTCTTT
ACCGTGGTCCAGGGGGGGGGTGGTAGGCATGTGTCATGCAACCTACGATA
TGTTCGTCTCTGCTCCAAGGAATTTTCCAAGGAACTTTCCGAGGAGTATT
CCCGGTATCCGGCAGGCTTTGTTCCTTGCTCACTGCAAAGACTTCCCACA
CGTCCCCCTCAATCCCCTTCGACTTCTGTGGCTGTCGCTTGCAGAACCCA
TATAGGTCGGGCACCCTCCAGTCCCATGTGTTGTTGACATCCTGAATACA
TTGTCATCCCCTCCCTCCCCCGGCTGTTGTGCTGTTGTGCTGTTGTTTGG
GCCGTCAGATTCTCAAGCCCCTTGAGTACACCAGCAAGCTCGGCAACTTC
CATGTGAGGTGCACGGCAAAGGGAGGTGGTCAAGCTGGCCAAGCCGGCGC
CATCAGGCTGGGTCTGGCGAGGGCGCTGGAGGCACACGACCCCTGGCTCA
GGAAGCTCCTCAAGAAAGGTACAGTGCAGAAGGATTAGAGCAGCGCGTAC
CCCTGGCTCAGGAAGCTCCAAGAAAGGTTCAGCAGCAGTGTCCGTACACG
TTCCGTTGCGGCAGTTTCCGTAGCACAATCCACTTGCTCTTTGCTACCTG
TGGTCTTGAAGAGCGTTGTTTATTTTCTTTACATCGAAGAACGCTCATTT
TTTCTTCTCCATAGCTGTTGTTGTTCCGCGATCCTGCGTGAAACCGGAAG
TTGACCACAGACCGACCGCTCACGGTTGTAGCACAGATCACCTTACCTCC
TTCGGAAATCGTCCAGTTTCGGAATACCGTACGTGACGTGAGATAGCACA
CCCCCCTCGACCGATTATAAAAGCTCGATTTCTCCACTGCAGAACGAGTG
GCAGCGCCGGAAACGGCGGCGATGAAGCGGTCTGTCTCGTCGAGATATTT
CCGGAAACATGTCGTTTCATTTATTGTGCATCCCCTTCGTCGTGCAGTAA
TGTAGATACTAGCTTTGAAAGTTTATCCAGGGGGTGTGGTATCCTGTTGA
ACCACGGTACAATGTACCTTCCCGTGTGGCATGTGGATGGGTGCCCGTGC
CCTCGAAACGACAACTTGGCGCGTCTTGTCTCGTGTTTTGCGGAGCTCTC
TGTGGAATGGTACCGTGGCTATGTATGTAGTGTTGCCTTCCTTCGGAATT
CTTCAAAATATCGTTTGTGGGGAATTGGGCGCTTTAATCGCAAGCGGCCA
AGAGGGGACGGCTTCGCACCCAGTGCTTCGAGGATGATATTCATCATATC
TCGTTCATTAGACCGTTGCCCGCTCAACGAGTTATACCACGTTTCGTGAC
CCCCGAAAATACAATACCCGACATCGACCTGACTATTTTCGTATCTTCCC
CTTCTCCCTTGCCGCCCCCGGTGCTTTGTATTGTTTCAGAGGGCATGATG
GAACGGGACTCTCGAAGGGTAGAGCGAAAGAAGCCAGGACTCAAGAAGGC
TAGGAAGGCACCGCAGTGGGTCAAGCGATAAGGGCTTGCATAGTATTGTA
GTGCATCTCCTTTTTTGGGGCAATATTTTGCTTTTCGATACATAGGCTTG
AAGAGTAGTGCCGCTCTTCATGTCCAATAATGTCGGTCCGCTGGCTGTCG
AGGTGGTTCCGCGTTACGATAGTGTCGGTTCGCTGGCTGCCGAACTGGTT
CGCTGCACGATAGTATCGGTTCGCTGGTTGTCGAGCTGGTTCTCTGCACG
ATAGTATCGGTTCGCTGGTTGTCGAGCTGGTTCTCTGCACGATAGTATCG
GTTCGCTGACTGTTGGCGAAATGGGCCGCCCTCGACGAATGAGAGGTTGA
TTTGCCCTGCAGGGCTCAAATGGCAGTACTAGTTGCCAATGGCGGTAGTC
ATCCACTTTTTGTTTTCTCTTGTTTCTGGTGTGTATTTTGATGTGTGCGG
TGGTGGCGTGTGGCGTACTGAATGACCGTCGGTTGCAACGTGCGATGACA
CGCTGTGAACGTGTTGTTCCGCGCACGTATCCATGGTCACCCGAAAGGTA
GCCTTCGGTATGGCGGTATCTACGCGTACCGTAAATGACTCAAGCTATCA
CCCCCCCTTGGACTTCAAAGCCCGATTTCTTCACAGCAGAAAACTAGTGG
CAATGTCGAAACTGTCCGCGTTGGGGCGGTCTTGTGGTGAGATTTCCCGA
AGCCCATCGATTCATTTGTTGACAATCTTGCGAGTAGTCGAGCTTTGAAA
ATAGACCGAAGGGTGTGTGTTACCTTGGGTCGCCTACGGCATACCTTGGC
CATCCGACGGCAGCCTTTGGTAGGATGGATGGTGGTTGGTGGGGCACCAA
CCACCATCCTTGTCGTGTCGTGTGTCCCAGCATCGGGGGGCTTACCTTAC
CGTGATAGGCTTTTTGTGCGGGCGAGCTCGACCTCTTCTTCTCACCGCCG
CCGCAAGTAAATGAATCGGTGACGCCTGCGCCCCGCCTCCTCCCGTTTCA
ACGGTGGGAATGGAGTCGCCGTCCATGGGAATCGCAAGTTGTGATCACTT
GGTGCCGGCGAGCATACGGGGAGGCTCCTATCACTTGCATGGTTCTCTGG
TGATTTAGTCTCTTGAACTATTTTCCCGGTGATTCTTGAAAAGTCCACAG
GCGGAGTGTAAGAGTACACAAAAGGAGTTGATTCATTTGCCGCATGTTTC
ACACAGTGATGCTTCTGCCGCCTAACAGAAAAAGCGGAGCTTCTGCAGCC
GCGTTGGACGAGGGAAGCCAACATACCTAGTAACCCCCCTTACGACTGAA
ATAGCTTCAGGTGTCACACTACTACGACAGGTCTTTTATGCTCGCTGCGC
TGTGCGCTTGACGATCCGTAATTTACTGCAAGCACGACAATAATAATAGT
GGGCGTGATCCCGCCCCGTTCCCCTCCGGTATATGACCTCGACCTGACGT
TGTTCCCTCGCCTTTCACTTCGATCGCATCATCACCCCAT back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig68:10808..19047- >mRNA_E_fasciculatus_S2_contig68.14922.1 ID=mRNA_E_fasciculatus_S2_contig68.14922.1|Name=mRNA_E_fasciculatus_S2_contig68.14922.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=966bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig68:10808..19047- (Ectocarpus fasciculatus EfasUO2)
ATGGCAAGCCGCGCAACGACAACGACGGCTGCAATGAAGCACCCGTTCGT
CCGGCGCGTGATGATGGCGGCAGCGACAACCGCCTCTCGCGGCGGCGGCG
GCGGCGGCGGCGGCAGCAGGGCGGCCCTCCACGCCTCGTCCTCTCAGGCA
GGCGGGCCAGCATCAGCAAGAACTACTGCTGCCTGCCGTCATGCCGGCAA
CAAGAACACGGCGTTGCTTGCCCCTGCTGGGCCTGCTGCTGGGCTGGTAG
TCTCTCGAAGGCATATGTCCTCTGGCACAACGGGAGGTGATAGCAGCGGG
AGGTTCAGCGAGGATCTGGAGAAGCTCATCTCCAGGGCGGGCGAGCGGGC
CGATCGCACGGGCAAGCCGGGCAAGGGCGAAGCCTCTGCTGTTGCGGTTG
CTGCGCCTCAGGCTGGCGTTGCTGGCGAGGGGGCAGGGGAGGGGGAGGAG
GAACCGGTGCTGTCTGCACGTGCGATGAAGTTCCGGGCCATGATCAGCAA
GCTCAGGCCCCAGAAGAAAGCTGTCATTGTCAAGACGTTCACGCCCTCGA
GGGAACCTTTAGTGGATAACTTGGGCCGCTCTTACGGCCTAGGAAGGCGC
AAGACCAGCACGGCCAGGGTGTGGATCTCTCTCTCCAAGGGCGAGGGAGG
CGTGTTCATGGTCAACTCGAGGCCCATGATCGACTACTTCCCCCGAGACC
ACCTTCAGAACGAGATTCTCAAGCCCCTTGAGTACACCAGCAAGCTCGGC
AACTTCCATGTGAGGTGCACGGCAAAGGGAGGTGGTCAAGCTGGCCAAGC
CGGCGCCATCAGGCTGGGTCTGGCGAGGGCGCTGGAGGCACACGACCCCT
GGCTCAGGAAGCTCCTCAAGAAAGAGGGCATGATGGAACGGGACTCTCGA
AGGGTAGAGCGAAAGAAGCCAGGACTCAAGAAGGCTAGGAAGGCACCGCA
GTGGGTCAAGCGATAA back to top
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