mRNA_E_fasciculatus_S2_contig6794.14915.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY1_ECTSI) HSP 1 Score: 294 bits (753), Expect = 2.300e-93 Identity = 145/150 (96.67%), Postives = 150/150 (100.00%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
RELAGRAVNQALQYSLTEDDEVEDLFLLLK++KERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGL+AVLVKVASFGLEPSKHLGRSLARLRPFFE+LH+RCGFHVCGEGGEYETLTLDCPLFVRKLV
Sbjct: 24 RELAGRAVNQALQYSLTEDDEVEDLFLLLKEVKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLNAVLVKVASFGLEPSKHLGRSLARLRPFFESLHSRCGFHVCGEGGEYETLTLDCPLFVRKLV 173
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTU4_9STRA) HSP 1 Score: 204 bits (518), Expect = 2.600e-59 Identity = 99/150 (66.00%), Postives = 119/150 (79.33%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
R + G + NQAL Y TE DEVEDL+LLL+D+K PEVE V SGAI S YQRTRVE+VC R+GL SLA LW+R Q+ LL +M+ + +DA+L+KVAS GL+P KHLG+S+ARL+P F TL R GFHVCGEGGEYETLTLDCP FVR+LV
Sbjct: 24 RPILGSSSNQALHYQPTEGDEVEDLYLLLQDVKAAHPEVEAVASGAIFSTYQRTRVESVCSRIGLASLAPLWQRDQAELLQDMITSNMDAILIKVASLGLDPHKHLGKSVARLQPHFLTLAARHGFHVCGEGGEYETLTLDCPAFVRRLV 173
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GRE2_ACACA) HSP 1 Score: 194 bits (494), Expect = 4.280e-59 Identity = 94/148 (63.51%), Postives = 115/148 (77.70%), Query Frame = 1
Query: 7 LAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
+ G+A+NQ L Y+ T++DEVE L++LLK++K+RFP V+GV SGAILS+YQR RVENVC RLGL SLAYLW+R Q LL EM E +DAVL+KVA+ GL+P KHLG+S+ LRP L G H CGEGGEYETLTLDCPLF K+V
Sbjct: 59 IRGKALNQDLHYAKTQEDEVESLYVLLKEVKKRFPNVQGVASGAILSDYQRFRVENVCERLGLVSLAYLWQRDQKELLQEMTEVPIDAVLIKVAALGLDPYKHLGKSITALRPLLFRLSDEYGCHPCGEGGEYETLTLDCPLFRYKIV 206
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Syncephalis pseudoplumigaleata TaxID=1712513 RepID=A0A4P9YU66_9FUNG) HSP 1 Score: 188 bits (478), Expect = 3.710e-58 Identity = 92/150 (61.33%), Postives = 113/150 (75.33%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
RE+ G QAL Y T DDE EDL+ LLK++K+R+P VE V GAILSNYQR RVE+VC RLGLTSLAYLW++ Q+ LL M++ GL A+L+KVA+ GL +HLG+SL ++P LH R G HVCGEGGEYET TLDCPLFV++LV
Sbjct: 55 REIHGTPKRQALDYETTIDDETEDLYALLKEVKQRYPAVEAVSVGAILSNYQRIRVEHVCQRLGLTSLAYLWQQDQAELLNSMIDNGLQAILIKVAAMGLN-ERHLGKSLGEMQPALMQLHDRFGLHVCGEGGEYETFTLDCPLFVKRLV 203
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KLG0_9STRA) HSP 1 Score: 198 bits (504), Expect = 3.710e-57 Identity = 95/148 (64.19%), Postives = 117/148 (79.05%), Query Frame = 1
Query: 7 LAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
LAG +++ + Y TE DEVEDLF LL+ +K++FP+VE V +GAI SNYQRTRVE+VC RL LTSLAYLWRR Q L+ EM++A LD++LVKVAS GL P KHLGRS+A L P F LH + FH+CGEGGEYETLTLDCPLF +++V
Sbjct: 115 LAGGSLSTEMGYDTTEGDEVEDLFRLLQQVKQQFPDVEAVSTGAIFSNYQRTRVEHVCKRLNLTSLAYLWRRDQDALMQEMIDAELDSILVKVASMGLNPKKHLGRSIADLYPTFLDLHEKYEFHICGEGGEYETLTLDCPLFKKRIV 262
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397WC71_9GLOM) HSP 1 Score: 184 bits (468), Expect = 1.220e-56 Identity = 88/149 (59.06%), Postives = 116/149 (77.85%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKL 447
R + GR++ Q Y LT DE EDLF LLK++KE P+++GV GAILSNYQR RVENVC RLGLT LAYLWRR Q LL+EM++AG++A+L+KVA+ GL+P+ HLG+S+ L P+ +L+ + H+CGEGGEYET TLDCPLF+++L
Sbjct: 55 RGIFGRSLIQDADYKLTIGDETEDLFELLKEVKESNPDIQGVSVGAILSNYQRVRVENVCSRLGLTPLAYLWRRNQKELLSEMIDAGINAILIKVAAIGLKPT-HLGKSIKELFPYLCSLNEKYDVHICGEGGEYETFTLDCPLFIKRL 202
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W809_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.750e-56 Identity = 91/148 (61.49%), Postives = 119/148 (80.41%), Query Frame = 1
Query: 7 LAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
L G++++ + YS TE DEVEDL LL+++++RFPEV+ V +GAI SNYQRTRVE++C RL L SLAYLWRRPQ L+ EM+EA ++A+LVKVAS GL P +HLGR++A L PFF L+ + FH+CGEGGEYETLTLDCPLF +++V
Sbjct: 71 LQGKSISTDMGYSATEGDEVEDLCCLLQEVQKRFPEVQAVSTGAIFSNYQRTRVEHICARLNLISLAYLWRRPQDELMQEMIEADINAILVKVASMGLVPRRHLGRTIADLYPFFLDLNEKYQFHICGEGGEYETLTLDCPLFKKRIV 218
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9THQ4_PHATR) HSP 1 Score: 184 bits (468), Expect = 2.480e-56 Identity = 94/148 (63.51%), Postives = 112/148 (75.68%), Query Frame = 1
Query: 13 GRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRR-PQSPLLAEMVEAGLDAVLVKVASF-GLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
G +VN AL Y T+ DEVEDL L L+ RFP ++GV SGAILS YQRTRVE+VC RLGLTSL+YLWRR PQ LLA M++ G+DAVLVK A+ GL P KHLG++LA L+ F TLH R FH+CGEGGEYETL LDCP + ++LV
Sbjct: 73 GLSVNTALVYEATDHDEVEDLCLALQTTLARFPNIQGVSSGAILSTYQRTRVESVCSRLGLTSLSYLWRRAPQRELLARMIDDGIDAVLVKTAAPPGLMPRKHLGKTLAELQSHFHTLHNRFQFHICGEGGEYETLVLDCPFYKKRLV 220
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FS09_9CHLO) HSP 1 Score: 186 bits (471), Expect = 4.980e-56 Identity = 90/146 (61.64%), Postives = 111/146 (76.03%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFV 438
+ LAG + + + Y TE DEVEDL LL ++K R P+VE V GAI S+YQR RVE VC LGL SL+++WRR QS L+AEMVE+G+ A+LVKVA GL P KHLG+++A++RP E LH+R G HVCGEGGEYETLTLDCPLFV
Sbjct: 88 KRLAGTSKSIGMTYERTEGDEVEDLRALLAEVKRRVPDVEAVSCGAIRSDYQRIRVEGVCDSLGLASLSFMWRRDQSELMAEMVESGVHAILVKVACLGLVPEKHLGKTIAQMRPVLENLHSRFGVHVCGEGGEYETLTLDCPLFV 233
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Match: Diphthine--ammonia (ligase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YW44_9STRA) HSP 1 Score: 194 bits (492), Expect = 1.670e-55 Identity = 93/150 (62.00%), Postives = 116/150 (77.33%), Query Frame = 1
Query: 1 RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNYQRTRVENVCGRLGLTSLAYLWRRPQSPLLAEMVEAGLDAVLVKVASFGLEPSKHLGRSLARLRPFFETLHTRCGFHVCGEGGEYETLTLDCPLFVRKLV 450
R LAG+++ + Y+ TE DEVEDL+ LL ++ +FPEV GV +GAI SNYQRTRVENVC RLGLTS+AYLWR+ Q L+ EM++A + +LVKVAS GL P KHLGRS+A L P F LH + FH+CGEGGEYETLTLDCPLF +++V
Sbjct: 69 RTLAGQSLATDMGYAPTEGDEVEDLYQLLVAVRAQFPEVTGVNTGAIFSNYQRTRVENVCARLGLTSIAYLWRKDQDELMQEMIDADMHCILVKVASMGLNPRKHLGRSIADLYPTFLDLHAKYQFHICGEGGEYETLTLDCPLFRKRIV 218 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6794.14915.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6794.14915.1 >prot_E_fasciculatus_S2_contig6794.14915.1 ID=prot_E_fasciculatus_S2_contig6794.14915.1|Name=mRNA_E_fasciculatus_S2_contig6794.14915.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=150bp RELAGRAVNQALQYSLTEDDEVEDLFLLLKDIKERFPEVEGVGSGAILSNback to top mRNA from alignment at E_fasciculatus_S2_contig6794:6098..7797+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6794.14915.1 ID=mRNA_E_fasciculatus_S2_contig6794.14915.1|Name=mRNA_E_fasciculatus_S2_contig6794.14915.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1700bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6794:6098..7797+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6794:6098..7797+ >mRNA_E_fasciculatus_S2_contig6794.14915.1 ID=mRNA_E_fasciculatus_S2_contig6794.14915.1|Name=mRNA_E_fasciculatus_S2_contig6794.14915.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=450bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6794:6098..7797+ (Ectocarpus fasciculatus EfasUO2)back to top |