|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6781.14905.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K714_9PHAE) HSP 1 Score: 778 bits (2008), Expect = 4.450e-267 Identity = 549/738 (74.39%), Postives = 556/738 (75.34%), Query Frame = 1
Query: 1 REARALCLELLLRSKGDEEVMKAFVDRRGLLFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALVGDKGEIAKHRKQLDDLHDKLKAEQDAEKKAKTEAADAEKRRRDLARAQSRPPNG---------------------------------------------------------------------------------------------------------------FAGRGPGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKVTAVPTVATAGGQDGATAGGVAAAAVATDGEGXXXXXXXXXXXXXXXXXXX-----APAASGVAGVGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDSATAVSETPQESDSVVAATMASHHADHRHWAERVKREREMERKFHGKGGGRSKGK--HGSRANAGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXKPMVTTVAWRRPGPYEKGVVHEDVLQLEVDSSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPALQASPQYAAAAPPQQ 1860
REARALCLELLLRSKGDEEVMKAFV+RRGL+FIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADS IRKQAKAVISHWRTALV DKGEIAKHRKQLDDLHDKLKA+QDAEKKAK E ADAEKRRRDLARAQSRPPNG AGRGPGGR XXXXXXXXXXXX XXXXXXXXXXILKVTAV T ATAGGQDG AGG XXXXXXXXXXXXXXXXXXX APAAS AG+GSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSED+ATAVSETPQESDSVVAATMASHHA HRHWAERVKREREMERKFHGK GGRSKGK HG RA+AGDE XXXXXXXXXXXXXXXXXXXXXXX KPMVT V WRRPGPYEKGVVHEDVLQLEV+SSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEA KEQQQQQ PANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVP LQASP YA PPQQ
Sbjct: 174 REARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSDIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAELADAEKRRRDLARAQSRPPNGVGGSPITAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXPAAKGVSAASKPGRDPPAAAADSSGAPGTGSXXXXXXXXXXXXXXXXXXXXSETGAAAXXXXGGAARYFVGRKLAGRGPGGRVRRPTVAFSGTPAGQGTGKGDRGXXXXXXXXXXXXAGXXXXXXXXXXILKVTAVSTAATAGGQDGTAAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAASAPAASRSAGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQVVKEFHSEDAATAVSETPQESDSVVAATMASHHAGHRHWAERVKREREMERKFHGKSGGRSKGKSDHG-RASAGDEEXXXXXXXXXXXXXXXXXXXXXXXKR-KPMVTAVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEALKEQQQQQAPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLPAGVPTLQASPSYAPG-PPQQ 908
BLAST of mRNA_E_fasciculatus_S2_contig6781.14905.1 vs.
Match: TFIIS (N-terminal domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV8_ECTSI) HSP 1 Score: 709 bits (1830), Expect = 9.830e-249 Identity = 473/615 (76.91%), Postives = 480/615 (78.05%), Query Frame = 1
Query: 1 REARALCLELLLRSKGDEEVMKAFVDRRGLLFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALVGDKGEIAKHRKQLDDLHDKLKAEQDAEKKAKTEAADAEKRRRDLARAQSRPPNGFAGRGPGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXILKVTAVPTVATAGGQDGATAGGVAAAAVATDGEGXXXXXXXXXXXXXXXXXXXAPAASGVA------GVGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ---------------------VVKEFHSEDSATAVSETPQESDSVVAATMASHHADHRHWAERVKREREMERKFHGKGGGRSKGKHGSRANAGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXK--PMVTTVAWRRPGPYEKGVVHEDVLQLEVDSSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 1758
REARALCLELLLRSKGDEEVMKAFV+RRGL+FIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALV DKGEIAKHRKQLDDLHDKLKA+QDAEKKAK EAADA+KRRRDLAR VTAVPT ATAGGQDG GG AA TDGE XXXXXXXXXXXXXXXXXXX G+GSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQ VVKEFHSED+ATAVSETPQESDSV A TMASHHA HRHWAERVKREREMERKFHGK GGRSK XXXXXXXXXXXXXXXXXXXXXXXXX K PMVTTV WRRPGPYEKGVVHEDVLQLEV+SSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ
Sbjct: 123 REARALCLELLLRSKGDEEVMKAFVERRGLMFIKGWLAEETKSINMMKLLLTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALVSDKGEIAKHRKQLDDLHDKLKAKQDAEKKAKAEAADADKRRRDLAR-------------------------------------------------------------------VTAVPTAATAGGQDGTADGGAAA----TDGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIGSGPPPIVSLDEMARAESEEKKRLRKAKPAGKKVGWADRAGRTLQESVEGRRLMLMNHPGTRRALQVVKEFHSEDAATAVSETPQESDSVAATTMASHHAGHRHWAERVKREREMERKFHGKSGGRSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRKKRKPMVTTVPWRRPGPYEKGVVHEDVLQLEVESSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPFYMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPHAATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQ 666
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 0 |
| Model size | 1862 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 1860 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842335.239433-CDS-E_fasciculatus_S2_contig6781:1224..1491 | 1696842335.239433-CDS-E_fasciculatus_S2_contig6781:1224..1491 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 1225..1491 - |
| 1696842335.2538567-CDS-E_fasciculatus_S2_contig6781:1945..2067 | 1696842335.2538567-CDS-E_fasciculatus_S2_contig6781:1945..2067 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 1946..2067 - |
| 1696842335.2643673-CDS-E_fasciculatus_S2_contig6781:2742..3256 | 1696842335.2643673-CDS-E_fasciculatus_S2_contig6781:2742..3256 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 2743..3256 - |
| 1696842335.2751348-CDS-E_fasciculatus_S2_contig6781:4411..4906 | 1696842335.2751348-CDS-E_fasciculatus_S2_contig6781:4411..4906 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 4412..4906 - |
| 1696842335.2847307-CDS-E_fasciculatus_S2_contig6781:5290..5386 | 1696842335.2847307-CDS-E_fasciculatus_S2_contig6781:5290..5386 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 5291..5386 - |
| 1696842335.2943444-CDS-E_fasciculatus_S2_contig6781:5692..5758 | 1696842335.2943444-CDS-E_fasciculatus_S2_contig6781:5692..5758 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 5693..5758 - |
| 1696842335.3043044-CDS-E_fasciculatus_S2_contig6781:6652..6787 | 1696842335.3043044-CDS-E_fasciculatus_S2_contig6781:6652..6787 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 6653..6787 - |
| 1696842335.3144643-CDS-E_fasciculatus_S2_contig6781:7905..8070 | 1696842335.3144643-CDS-E_fasciculatus_S2_contig6781:7905..8070 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6781 7906..8070 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6781.14905.1 >prot_E_fasciculatus_S2_contig6781.14905.1 ID=prot_E_fasciculatus_S2_contig6781.14905.1|Name=mRNA_E_fasciculatus_S2_contig6781.14905.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=620bp
REARALCLELLLRSKGDEEVMKAFVDRRGLLFIKGWLAEETKSINMMKLL
LTVAKVLPVTYSSLMQSDAGKALKALNKHADSGIRKQAKAVISHWRTALV
GDKGEIAKHRKQLDDLHDKLKAEQDAEKKAKTEAADAEKRRRDLARAQSR
PPNGFAGRGPGGRGGRPAAAGKGGKGGATAAAAAAATAGRVGGGGAAAAA
AGRPGGGSGGILKVTAVPTVATAGGQDGATAGGVAAAAVATDGEGASAAA
AVGGESAGAEGSAAAPAASGVAGVGSGPPPIVSLDEMARAESEEKKRLRK
AKPAGKKVGWADRAGRTLQVVKEFHSEDSATAVSETPQESDSVVAATMAS
HHADHRHWAERVKREREMERKFHGKGGGRSKGKHGSRANAGDEEEEEAAV
AGAEAAAAAAAAAAAARKKRKPMVTTVAWRRPGPYEKGVVHEDVLQLEVD
SSEAESQGARTRAGLEQVYLSSGDIPSTPAEPDAASFLPVDEVQMYKIPF
YMESELEQMQAEAPKEQQQQQPPANQPGPVKVTLQQVRALDDALASVDPH
AATALRSRFASEPRLLSALLAPEGRVNNALLRSMSQQALSTPSNVHLTLP
AGVPALQASPQYAAAAPPQQ back to topmRNA from alignment at E_fasciculatus_S2_contig6781:1223..8070- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig6781.14905.1 ID=mRNA_E_fasciculatus_S2_contig6781.14905.1|Name=mRNA_E_fasciculatus_S2_contig6781.14905.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6848bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6781:1223..8070- (Ectocarpus fasciculatus EfasUO2)
CGAGAAGCCCGAGCGCTGTGCCTGGAGCTCCTGCTGCGCAGCAAGGGCGA
CGAGGAGGTGATGAAGGCGTTCGTAGACAGGAGGGGGCTTTTGTTCATCA
AGGGCTGGCTGGCGGAGGAGACCAAGTCCATCAACATGATGAAGCTCCTG
CTCACCGTGGCGAAGGTGTGTGTTGTCTAACCGTGTGTGTTTTTATTGCT
AGCATCGACCGCGCCGCGCTAGCCGGCCGGCCGACCAATGAGAGGACGTC
AGTTTCAGCGGGTTAAAACTCTGGAAGGGTGTGTGTGCGTGTGTGTGTTT
TTATTGTTAGCATCGACCTCGGTCACCGGCTGACCAATGAAAAGACTTCA
GTGTCAGCGGGTAAAATGAAGGTCCCTCGAAGAGGGGTGTGTGTGTTTTC
TTTTTGTCGTGTGGTGGTGTTGAGATTCGTGACCGTTAACTGGTGTTTTC
GTAGGGGCGGTGGTGGTGTCATGCGACTAACGTGACTGGTTGTTGAGGGT
CATCATTCGTTGTGTTTTTCTCGGCGTTGGAACGGTGGTGACCTCTACCG
ACCCCATCCTTTTCCCGAGCTCCTGTACTACATCCCGGGAAAAGACGAAG
GAACGTCAGGGTCATGATCACATTTTAAGCCTGTAACCGCAACTGCTGCG
CGTTGTGGTGGGCAAGTGCTCTTGGACCTTGAGAAGAGTTTCAGAAGTGT
TCTGATCGCCGTTACGACGGCGTAGCGCTCTCTATCAGGGAGTTGCATTG
CAAGAGAAGGCGGGCAATCCAGTAGGTGGAGACACTCATATTGTAAACCT
GTCGATTTTGAACGAGGAAGTCAGGGAGTTGCATTGCAAGGGAAGGCGGG
CAATCCAGTTCGTGGAAACACTCTTGTTGTAAACTGGTCGATTTTGAACT
AAGAAAGTTTCAGGGTTTGCGTTGTTTTTCTTAATTTGGCCCTTGGTGCG
TTTCACTGATTCAGGCCCCCCTGCCAATGTCCGCGTGTGTCTGCGTGCCC
CCCTTTGGGCATCGACGACGTTGTAGTTGTAACGGTAGCACGCACACACC
ATCTCTTCTGATACCGCTTCTGCCCAGGGCTTATGCCCTCCCGCCGACAA
AAGTGGGGCATGCTATTAATTATTAATATCTACGTCCCGGCTTCTTGGTA
TTGTCGAGATGCAACGGGTTTCTATTCGGCACGATATGATACTTGTCTGC
ACTATCTATGGCCGTATGCATACGTGTATCTTGGATGCTGATTACCCCCC
CCCCCTCGCGACGGTGCGCTCTTTTACACACAGGTTCTGCCTGTCACCTA
CTCAAGCCTAATGCAGTCGGACGCGGGGAAGGCCTTGAAAGCGCTCAACA
AGCACGCCGACTCCGGCATACGGAAGCAGGCGAAGGCGGTCATCTCCCAC
TGGAGGACGGCATTGGTGGTGAGAGGAAGGGAGGGGAGGGGGTTGGGGGA
TGCGTCCGCGAAACCGGTTGTTTTCCTCTTATTGTTGTTCGCATTGGGAG
GAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTCCCGGGCTCGTTT
TTTTTTTTCTGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGTGG
GGGGGGGGTGAAAAATAAAAAAAAAAAANNNNNNNNNNTGTTTGGTTGTT
TTGTGTGGTGGTGTTGATGTTGTTGTGTTTGAGGTTGGTGTGTGGGTGGA
GGTGGGGTTGGTGTGTTTTGTGGGGGGGGGGGGACGCGTCTCTGCGAACA
CCGGTTGTTTTCCTCTTGGGTATTTTTGGTGGTGTCGACACCAGGGGATA
GACGGGCGAGAGCGGCCCTCATAAGCCAGACACCGTGGGCGAGTGTTTGC
GCGTATATGCCGACGAGGCTGGCATGGTGTTTAACTCCCCGAGGGCGGAC
GAACAAGTCGCTGGCGCTGTACACCGTTACATGCGAAACGGCAGGCACGT
ATCATGCCGTGGTTCTAGGCGACAAGGTAGTAGAAAGACGTAACCCCTGC
CCGGCCCATGTTTCTGTACCGCGGGTGCTGCCCTTTTTGACAATTCCAGC
GGAGGTCTCGGTTCTCTTGTGCACCTATTCTGCCTTGTCGCCTAGAAACA
CGGCATGATACGTGCCTAAACAGGAGTAGTGGCGGTGCATGCACTTGAAC
GTTGAGCGCCATACTCGTGCTGCTGTGACCTTGTTGGGCATTTGATGGAA
AGTGAGGGGCTCGTGGCTAGAGTGCAATCGTCGCTGACTTTTGTCGTTTT
GTGTGTGCCCCCCTCCCCCCCCCACCCTGTCTCACGCTACCTGTTTTTTT
TGTGTATGGAAGGGCGACAAGGGCGAGATCGCCAAGCACCGGAAGCAGCT
CGATGATCTGCACGATAAGCTCAAAGCGGTGAGAAATCGTTTGTTCGTTG
CTATCCCTTAGCCCGCGGCATCTTCTTGTGCATGCTTTTGGATGTTGTTG
TCATTTTGGTTTGCATACGTCGTCACTCAAGTGTATAGGCGACAACCGCC
TTTAGCACAAGTATTTCCTCTTGTTTTTGTATTCTATTCGCTCATTCCTT
GCACCCCCCACCTCCTTTGTAAGTGCTAGAATTCCTCTGCTTCGTTATTC
TTCTCGCTCGCCACCCCTTAAAACCTCCCTCCACCTCCTCGTCCTCGTCC
TCTCTCTACTACAACACCTCCCCGGCTCAAACAGGAGCAGGATGCCGAGA
AGAAGGCCAAGACGGAGGCGGCGGACGCCGAGAAGAGGCGGCGAGACCTG
GCCCGGGCGCAGAGCAGGCCCCCCAACGGCGTCGGAGCCTCCCCAATCAC
GGCTCCCCCTCCCCCGGTCCTCTACACGCGCGCCTCCTCTTCGAACTCCA
TGGATTCCGACGCAGCTGCTGCAGGGGGGGGCGGCAGCAGCAGTAGTAGT
AGTAGCACTCCAGCAGCAAGGGGGGGCTCGGCGGCGTCGAAGCCGGGTAG
GGACCCCCCAGTCACAGCCGCGGGGTCCGGAACTGCGTCCGCCGCTGCTG
ATGGCGGCGGAGCGGGGGCCGGGAGCAAGTCGAAGAGCGCGGCGGCGGCG
GTGGCGGTGGCGGGTGGCGCCGGGTCTCCCGCAGGTGCCGGTGCTCCCGC
GACAGGCGCCGCTGCCGGGGCCGCGGCGGCGGGCGGGGCCGGGAGGTTCT
TCGCCGGCAGGAAGTTCGCCGGCAGGGGGCCCGGTGGCAGAGGAGGGCGG
CCTGCGGCGGCGGGCAAGGGCGGCAAGGGCGGAGCTACTGCTGCTGCTGC
TGCTGCTGCTACTGCTGGGCGTGTTGGCGGAGGAGGGGCGGCTGCTGCTG
CAGCGGGGCGACCAGGAGGCGGTAGCGGCGGAATTTTGAAGGTCACCGCT
GTTCCGACGGTGGCGACAGCGGGGGGCCAAGACGGGGCCACAGCCGGCGG
CGTCGCCGCCGCCGCCGTCGCCACTGATGGCGAAGGAGCGAGCGCGGCGG
CGGCGGTAGGGGGTGAGTCGGCGGGGGCGGAGGGATCGGCGGCGGCACCG
GCCGCTTCGGGGGTAGCGGGGGTCGGCTCGGGACCGCCGCCGATCGTGTC
GTTGGACGAGATGGCGCGGGCGGAGTCGGAAGAAAAGAAGCGGCTTCGGA
AGGCCAAGCCGGCGGGGAAGAAGGTCGGGTGGGCGGACCGCGCGGGACGA
ACGCTCCAGGTGAGTGAGGACGGTTGTTGGCCTCGTGGGTGGTTCGGGGT
GGGTGGGAGCGAAGATTGGTGAAGCTCATCAGTATTTGGAAGGAAAAACG
TTGAGGCCGACGTTTGGTGTTGAATCAAGGGTGTGTGGGAGCGATTGGAG
AAACCCCCGGTGCATTTTGAAGGAGAGTGTCAAGGGCAACGTCTGATGTT
GAATCACCCGCACCAGAAGACTCTTGCGGAAGACTCTTGGTTGAGGGTAC
AAAACACCAGAGGACTCTTGGTTGAGGGTACAAAACACCAGAAGACTCTT
GGTTGAGGGTACAAAACACCAGAGGACTCTTGGTTGAGGGTACAAAGACC
AGAAGACTCTTGGTTGAGGGTACAAAACACCAGGTGCAGTTTCTCGTGGC
GTCATAAAAAATCAGAAATGATCATGAAGATAAAAAAATCATCATCACGT
GGTACAGGTGGTACTGCTGTATTGCAGGACAAGCCGTAGATGGGTGGGTT
CGAATTTCAATACTCTTACCTCAAAGAAGAAAGCTGCCGCGTTGTTGATA
AAAGCTGTCTGGAGGACATGTGATACGGGGACAAATCGGTGTCTTGATTC
TCCACTGCCGGGTAGGGAGTCCGTTCCTCTCACGTTTACGTGGTGGTACT
GGGGTAGTGGCGGCCGGCGTGTGCGCCTGCGTTATTCTTTTCTCTTCTCT
CCGATCCACCCGCAGGCTCGCTGGCAACGAGTTTTTTTGCTGGGGTGTCG
ACTTCTTTTGTTTTTTTCTCGCAAAATCAAAACGTATTTGCTTCTATCCA
CAAAGATACCGCGTCCAGGATCAAGTTGGCAAATAACGACCTAACACCTA
CGTACCTGTGGTTCGCTGATCCCCGAGCAGCATACAGCAATATAAATCTG
TTTTGATTCACTACATCTGTCACCGTTTTTCACCTGTCTGTCGGCAGGTG
GTGTGTTCCTGCCGATCCCCGAGTTATTAAAAAGTCGCTAGTGCATCTGT
CACCGTTTTTCACCTGTCTGTCGGCAGGTGGTGTGTTCCTGCCGATCCCC
GAGTTATTTAAAAAAGTGATCAAAATCTGTTTTGGTTCACTCACGTACCA
GCACGTCATTTACCCGCCTTTCAAATCACTGCTGTCGCTGTGCGTGACGG
GGTGGTGCATGCAGGTGGTGAAGGAGTTCCACTCGGAGGACTCGGCCACT
GCCGTCTCGGAGACGCCGCAGGAGTCCGACTCGGTCGTGGCGGCCACCAT
GGCAAGCCACCACGCCGACCACAGGCACTGGGCGGAGCGCGTGAAGCGCG
AGCGGGAGATGGAGCGCAAATTCCACGGTAAGGGCGGAGGCCGCAGCAAG
GGCAAACACGGCAGCAGGGCTAACGCCGGGGACGAGGAGGAAGAGGAAGC
AGCGGTAGCGGGCGCGGAAGCGGCGGCGGCGGCGGCGGCGGCAGCGGCAG
CGGCCAGGAAGAAGAGGAAGCCGATGGTTACCACCGTGGCGTGGAGAAGG
CCGGGCCCGTACGAGAAGGGCGTGGTGCACGAGGACGTGCTGCAGTTGGA
GGTGGATTCGAGCGAGGCCGAGAGCCAGGGGGCGAGGACCAGGGCCGGGC
TGGAGCAGGTGTACCTGTCGAGCGGGGACATCCCGTCCACGCCGGCGGAG
CCAGACGCCGCTTCGTTCCTTCCAGTCGGTGCGCTCCCAACTCTGTGTTG
GTTTTCTTACATTTAGCATGGACCGCGCTAACTGGCTGACCGATGAAAAG
ACGTCAGTCTTGTAGCGGGAAAAAAAGTGTATGTCTGTGTCTCTCTTTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTCTCTGTTTCGAT
CTCGATTTTAACCTCTCTCTCTCTCACACACTCACTCGCCGTTGCTGTTT
TTCACAGTCTTGGTGGTGTCGTTTCTTGTTCTTGTTGTGAGAACGTTGCA
TCTGTGTGCAGGTGTCGTTGGTTTTTCTATTTTGTTCCCCCGCACTCTCG
GTTGAGCTAAATAGTCGTTTATCTCGTAAAACATTTCAGCCATTGCTTCT
AGCGCCGTCATCGTCGCGGAAGGTACAACCACGGGGACGCCCCCCCCCCC
CCCCCCCCCCCCACCCCCCCCCCACCCACACACACCCACCCCCCCACCAC
CCCCACACTCAGCAGGACGACACACCCAACAACAACNNNNNNNNNNATAG
ATTTTTTTTTCCCAAAAACTTTTTCCCCTTTTTTCTTCCCCCCTCCATCT
TGCCGTAAGGCTCACCCTCGGGGGCCCCCCCCCCCCCCCCCCCGTAGAAT
CCTCGCTCACAGTACCTCCACGCTCTCTCGAAACCGTTGCGATCTGCGCG
CAGACGAAGTCCAAATGTACAAGATCCCGTTCTACATGGAGTCAGAGCTG
GAGCAGATGCAGGCGGAAGCCCCGAAGGAGCAGCAACAGCAGCAGCCACC
AGCCAACCAGCCTGGGCCTGTCAAGGTGCGCTAGCTGGAAAAGTAGAGGG
TGGCCACGCTTTACGGTTCTCTCCTTCGCCGGCGTTCCCTATGAAGCCGC
GTCCATTGTCGGGTGCGCCTACAATGTTTTTTGTTCGTCCCAGTCACTTG
ACGACCTCTCACTATAATAACTGGGCTTTGAAATGGAGCGGGCGGGGGGA
GGGCCGGGGGACAGGGTCAATATCTCTTTACGCCTGCCGTGTTGGTGCCA
TGGTATTTTTGCTCTCCTTCGTCCCGCTGGAGGGATCTAGATACGCGTGG
CGAAAAGGGACGGGACACGCACATACCGGTCACCTCGGCTCCGTGCGTAC
ATGAAATATCATTCATAGCAACAGCGTCTCTACGACAATATTTTGGGAAG
TCTTCTAGATACTTCTTTGTCTCGCTTGTACGTTGACTTCCTTCCGCTTG
GCTCCCCGCCCCCGTGTCTACCTGCGCAGGTGACTCTGCAGCAAGTGAGG
GCGCTCGACGACGCGCTCGCGAGCGTCGACCCCCACGCCGCGACGGCCCT
GCGGAGCCGCTTTGCCTCGGAGCCCCGGCTCCTCTCGGCCCTGCTTGCCC
CCGAGGGGCGGGTCAACAACGCCCTGCTCCGGTCGATGTCGCAGCAGGCC
CTGAGCACCCCGTCCAACGTCCACCTCACGCTTCCCGCCGGAGTGCCGGC
GCTTCAGGCCTCGCCGCAATACGCCGCCGCTGCTCCTCCGCAGCAGCA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig6781:1223..8070- >mRNA_E_fasciculatus_S2_contig6781.14905.1 ID=mRNA_E_fasciculatus_S2_contig6781.14905.1|Name=mRNA_E_fasciculatus_S2_contig6781.14905.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1860bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6781:1223..8070- (Ectocarpus fasciculatus EfasUO2)
CGAGAAGCCCGAGCGCTGTGCCTGGAGCTCCTGCTGCGCAGCAAGGGCGA
CGAGGAGGTGATGAAGGCGTTCGTAGACAGGAGGGGGCTTTTGTTCATCA
AGGGCTGGCTGGCGGAGGAGACCAAGTCCATCAACATGATGAAGCTCCTG
CTCACCGTGGCGAAGGTTCTGCCTGTCACCTACTCAAGCCTAATGCAGTC
GGACGCGGGGAAGGCCTTGAAAGCGCTCAACAAGCACGCCGACTCCGGCA
TACGGAAGCAGGCGAAGGCGGTCATCTCCCACTGGAGGACGGCATTGGTG
GGCGACAAGGGCGAGATCGCCAAGCACCGGAAGCAGCTCGATGATCTGCA
CGATAAGCTCAAAGCGGAGCAGGATGCCGAGAAGAAGGCCAAGACGGAGG
CGGCGGACGCCGAGAAGAGGCGGCGAGACCTGGCCCGGGCGCAGAGCAGG
CCCCCCAACGGCTTCGCCGGCAGGGGGCCCGGTGGCAGAGGAGGGCGGCC
TGCGGCGGCGGGCAAGGGCGGCAAGGGCGGAGCTACTGCTGCTGCTGCTG
CTGCTGCTACTGCTGGGCGTGTTGGCGGAGGAGGGGCGGCTGCTGCTGCA
GCGGGGCGACCAGGAGGCGGTAGCGGCGGAATTTTGAAGGTCACCGCTGT
TCCGACGGTGGCGACAGCGGGGGGCCAAGACGGGGCCACAGCCGGCGGCG
TCGCCGCCGCCGCCGTCGCCACTGATGGCGAAGGAGCGAGCGCGGCGGCG
GCGGTAGGGGGTGAGTCGGCGGGGGCGGAGGGATCGGCGGCGGCACCGGC
CGCTTCGGGGGTAGCGGGGGTCGGCTCGGGACCGCCGCCGATCGTGTCGT
TGGACGAGATGGCGCGGGCGGAGTCGGAAGAAAAGAAGCGGCTTCGGAAG
GCCAAGCCGGCGGGGAAGAAGGTCGGGTGGGCGGACCGCGCGGGACGAAC
GCTCCAGGTGGTGAAGGAGTTCCACTCGGAGGACTCGGCCACTGCCGTCT
CGGAGACGCCGCAGGAGTCCGACTCGGTCGTGGCGGCCACCATGGCAAGC
CACCACGCCGACCACAGGCACTGGGCGGAGCGCGTGAAGCGCGAGCGGGA
GATGGAGCGCAAATTCCACGGTAAGGGCGGAGGCCGCAGCAAGGGCAAAC
ACGGCAGCAGGGCTAACGCCGGGGACGAGGAGGAAGAGGAAGCAGCGGTA
GCGGGCGCGGAAGCGGCGGCGGCGGCGGCGGCGGCAGCGGCAGCGGCCAG
GAAGAAGAGGAAGCCGATGGTTACCACCGTGGCGTGGAGAAGGCCGGGCC
CGTACGAGAAGGGCGTGGTGCACGAGGACGTGCTGCAGTTGGAGGTGGAT
TCGAGCGAGGCCGAGAGCCAGGGGGCGAGGACCAGGGCCGGGCTGGAGCA
GGTGTACCTGTCGAGCGGGGACATCCCGTCCACGCCGGCGGAGCCAGACG
CCGCTTCGTTCCTTCCAGTCGACGAAGTCCAAATGTACAAGATCCCGTTC
TACATGGAGTCAGAGCTGGAGCAGATGCAGGCGGAAGCCCCGAAGGAGCA
GCAACAGCAGCAGCCACCAGCCAACCAGCCTGGGCCTGTCAAGGTGACTC
TGCAGCAAGTGAGGGCGCTCGACGACGCGCTCGCGAGCGTCGACCCCCAC
GCCGCGACGGCCCTGCGGAGCCGCTTTGCCTCGGAGCCCCGGCTCCTCTC
GGCCCTGCTTGCCCCCGAGGGGCGGGTCAACAACGCCCTGCTCCGGTCGA
TGTCGCAGCAGGCCCTGAGCACCCCGTCCAACGTCCACCTCACGCTTCCC
GCCGGAGTGCCGGCGCTTCAGGCCTCGCCGCAATACGCCGCCGCTGCTCC
TCCGCAGCAG back to top
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