mRNA_E_fasciculatus_S2_contig6766.14886.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI) HSP 1 Score: 357 bits (915), Expect = 1.320e-116 Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 1
Query: 223 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLVS 768
MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGD NIIQSTLGPASQHVPDFA STYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQL
Sbjct: 1 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAG 182
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI) HSP 1 Score: 98.2 bits (243), Expect = 1.560e-19 Identity = 88/281 (31.32%), Postives = 126/281 (44.84%), Query Frame = 1
Query: 4 GYNGRPPSAAIL-----KSACETVM---EG----REHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKAL-ANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGP----ASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPR-RQVALVQLSARDGYTVLFHLKYEERRR--GILPTALKELLVNDTIQLVS 768
G++ PPSA L K ET + +G RE + R+ QLVDG +LAGD S K K IR+S + HG++TI+NEY QVV + + AS+ ++ LK + R+L GF+ ++++D CC DR ++ + + D A LP LEFP G V N S + L + + + VLG D EW G V+ VQLS DG F L+ ++ P AL+ LL N +I V
Sbjct: 213 GFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKA---MTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALIDGCQLQGN---VLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVG 487
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE) HSP 1 Score: 95.1 bits (235), Expect = 1.850e-18 Identity = 76/242 (31.40%), Postives = 108/242 (44.63%), Query Frame = 1
Query: 73 EHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGP------ASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEER--RRGILPTALKELLVNDTI 756
E + HR Q DG L+GD S K K IR+ K +G++T+ NEY QVV QRP + +L E+ LK NR++ GF+ ++ TD CC DR ++Q S H+ D + E LP L+ +P +V E + Q++ R V G D EW P G R VA Q++A G + LFHL+ + P LK LL + +I
Sbjct: 339 EEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMK---TGALSELVEELKPFFNRFVRNGFKVFTLWNTDDCCDDRQLLQRVFREFEEATGISLHLEDEVDAGVQLE----LLPPLDLEF--TPAIV-YDPEAVAAACGSLRQIISLNRVEGKMVCGADAEWQFSPRG-REPVATFQIAALRGPSFLFHLQRGSSGFTKETFPAPLKALLEDSSI 569
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI) HSP 1 Score: 70.1 bits (170), Expect = 1.160e-10 Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 1
Query: 73 EHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQ 375
E + HR Q DG L GD S K K IR+ + +G++T+ NEY QVV QRP + +L E+ LK R++ GF+ ++ TD CC DR ++Q
Sbjct: 106 EEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMK---TGALSELVEELKLFFMRFVRNGFKVPTLWNTDDCCDDRQLLQ 209
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QG90_9FUNG) HSP 1 Score: 72.0 bits (175), Expect = 1.170e-10 Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 1
Query: 7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASP--ILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWS----------VRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTI 756
YNG PS+ L +++ H+ + + G L D S K++K + +V+ F G++T++NEYG++ MQ V S + P + + + Y Q+ +TD GDRN ++ + ++ V S E R P FP P + V V S E++S L + ++ +GFDIEW+ R +G VALVQ+ DG T+ + L+ P L++L+ + I
Sbjct: 281 YNGYIPSSNYLSYVYRSLVAEYRHFTDQHTSQLGGIILKLDHSFKIIKHMGKVNGVSTFAGLFTVLNEYGEIRMQL---LVPSKSHNCLRPSFQNMMDSYRKFNSDMPQIAYTDNVTGDRNFLEEVIPSLTRDVVHVTPS--HRELVTRNNPYSSFPIATIPTNVPVTVLSTQQEINSACDTILGKVDGGTSKLHVGFDIEWTPSFAYPVGVRARLTGSPIPVALVQIY--DGETI-YLLRTYTFNSITFPIKLRQLIESPKI 535
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FPQ5_PROLT) HSP 1 Score: 68.2 bits (165), Expect = 2.680e-9 Identity = 64/256 (25.00%), Postives = 113/256 (44.14%), Query Frame = 1
Query: 7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHK-VVKAIRVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPA----VLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQ 759
YNG PS L M ++ ++ ++ GTN D ++K ++ + GV+TI+NEY +V+ GV +L + +++ N Y QGF V +TD DR ++Q+++ V A + E L + G V+V ++ E+ I +L A +A + V+G D EW PS R + ++Q++ + VL K+ + G LP +L LL + +++
Sbjct: 333 YNGLVPSVHWLTDLFTKEMTRQKPKLDKRTSMLSGTNFGHDATYKGAMRLCAPDGTMIMVGVWTIVNEYNEVLGHLLTPTNGVDNLVAVLKAIESDLNYYHGQGF---VVCYTDNPKHDRKMMQASIKSLVAGVEPVA-------QYEAPLETAKLTYG-----VKVLAKEAEIDEAILKNILEDANDAAKSGKEIVVGLDAEWDSGPSAGRG-IDIIQIAYNESVHVLRVSKFTKDNGGQLPRSLIMLLEHPSVR 572
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 3.460e-6 Identity = 44/141 (31.21%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 4 GYNGRPPSAAIL--------------KSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAIRV------SHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKAL-ANRYLTQGFR-PIQVYWTDLCCGD 360
G N R PSA L K+ T G ++ R+ QLVDG LAGD S K K IR+ + + +G++TI+NEY QVV + + AS+ ++ LK + R++ GF+ P+ ++ DL +
Sbjct: 6 GLNRRHPSAHYLGDIWHKWFYEMPMVKTWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMK---TASVHDLKSDLKMMFVQRFVGHGFKLPVILFTVDLAVAE 143
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7V7G1_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 1.630e-5 Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 1
Query: 7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQL----LRRARASAPAV-LGFDIEWSVRPSGPR--RQVALVQLS-ARDGYTVLFHLKYEERRRGI--LPTALKELL 741
Y P A LK M+ + + + G GD S K++K + +++ VF +YT+ NEY +VV+ V SL Y QG P +++TD G + ++ L +V EE + NL PA + A + +++++I L + + + AV LGFD+EW V R R+ +L+Q++ D + + + ++ RG LPT L++LL
Sbjct: 68 YASSLPFATYLKYMYTFTMKFYKPLIDAEMVKLGGIIFKGDHSFKIIKKLGKINGSSVFTALYTVCNEYEEVVLML---LVHTKSLTHSEETFTKSFQNYSLQGQEPPLIFFTDNVLGHQKFLEDCLPSLKTNVEHIVIPKA-TEENNVSVSNL--PADVAVHEYTTAKQINDMATKIMNDLGDAFVEGSSDDSKAVYLGFDLEWVVYQKKERFYRRTSLIQIAYILDVFLLRLCMLPKKTDRGNHQLPTKLEQLL 317
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UVI0_9FUNG) HSP 1 Score: 56.2 bits (134), Expect = 2.510e-5 Identity = 65/267 (24.34%), Postives = 110/267 (41.20%), Query Frame = 1
Query: 7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVP----DFASSTYFAEEAERQLPNLEFPA------GASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRR--QVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLVS 768
Y G P+ +++ ++E + + L+DG GD S K K + ++ VF G+YT+ NEY ++V Q V +L + + + Y G ++TD GD+ ++ + V D +ST QLP+ + G V+ E E S RI + A +G D EW + S +V +VQL+ + VL H+ +R LPT+L +L N++++ V
Sbjct: 306 YAGFVPTGTYIRTLYTAIIEVLQPKMDKHMMLLDGKIFKGDHSFKFPKHMAKIEDTSVFTGLYTMTNEYEEIVHQV---LVPSKALSYLKHSFQKMRKAYTDYGHEMPIAFYTDNVKGDQTFVEGIFESLKEGVKPTSVDEMNSTGSNSCNYLQLPDAVEVSYICRDFGLMESSVKHLHEEIESSVRI----------NGEAAIGLDCEWDISYSQGVDICKVDVVQLAFKKKVYVL-HI---DRCWTSLPTSLVSILENESVKKVG 555
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MZR0_9FUNG) HSP 1 Score: 54.3 bits (129), Expect = 8.660e-5 Identity = 49/177 (27.68%), Postives = 76/177 (42.94%), Query Frame = 1
Query: 109 GTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQS---TLGPASQHV--PDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSG 621
G L GD S K++K + +++ VF +YT+ NEY +VVM V SL + Y Q +P +++TD GD+ ++ +L QHV P A +LP L+ PA ++ +E +L + + P LGFDIEW +G
Sbjct: 17 GIILKGDHSFKIIKKLGKINSSSVFTVLYTVCNEYEEVVMML---LVHTKSLTHLEDTFTKFFANYEYQNQQPPIIFFTDNILGDQAFLEKYPLSLRTDVQHVIIPKAAYDM-------TKLPLLQIPANVKISMLTTKNETNDLGTDF---VNGECDEPNPVYLGFDIEWVSSENG 180 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6766.14886.1 >prot_E_fasciculatus_S2_contig6766.14886.1 ID=prot_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=260bp GGYNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKback to top mRNA from alignment at E_fasciculatus_S2_contig6766:542..1668- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6766.14886.1 ID=mRNA_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1127bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6766:542..1668- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6766:542..1668- >mRNA_E_fasciculatus_S2_contig6766.14886.1 ID=mRNA_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=780bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6766:542..1668- (Ectocarpus fasciculatus EfasUO2)back to top |