mRNA_E_fasciculatus_S2_contig6766.14886.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6766.14886.1
Unique NamemRNA_E_fasciculatus_S2_contig6766.14886.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0J2_ECTSI)

HSP 1 Score: 357 bits (915), Expect = 1.320e-116
Identity = 178/182 (97.80%), Postives = 178/182 (97.80%), Query Frame = 1
Query:  223 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLVS 768
            MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGD NIIQSTLGPASQHVPDFA STYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQL  
Sbjct:    1 MQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDGNIIQSTLGPASQHVPDFALSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLAG 182          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIV2_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.560e-19
Identity = 88/281 (31.32%), Postives = 126/281 (44.84%), Query Frame = 1
Query:    4 GYNGRPPSAAIL-----KSACETVM---EG----REHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKAL-ANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGP----ASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPR-RQVALVQLSARDGYTVLFHLKYEERRR--GILPTALKELLVNDTIQLVS 768
            G++  PPSA  L     K   ET +   +G    RE +  R+ QLVDG +LAGD S K  K IR+S        +  HG++TI+NEY QVV  +    +  AS+ ++   LK +   R+L  GF+   ++++D CC DR ++ +            + D A            LP LEFP G     V     N    S + L    + + +   VLG D EW     G     V+ VQLS  DG    F L+   ++      P AL+ LL N +I  V 
Sbjct:  213 GFHSSPPSAHYLGDIWHKGFYETPVVQADGCSWTREEYLQRRAQLVDGCSLAGDASFKYAKVIRLSAGADGTRARPVHGIFTIMNEYDQVVFSKA---MTTASVHDLKNDLKMMFVKRFLGHGFKLPVIFYSDECCDDRQLLLTMFKEIELETGARLYDTAEEAGGGSPGVEVLPALEFPPGKRGECVFDFRPNSIAPSVVALIDGCQLQGN---VLGLDCEWEPSLGGTTPNPVSTVQLSLPDGTAYCFQLQRGNKKTTSSNFPKALQNLLENPSIAKVG 487          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQG2_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.850e-18
Identity = 76/242 (31.40%), Postives = 108/242 (44.63%), Query Frame = 1
Query:   73 EHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGP------ASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEER--RRGILPTALKELLVNDTI 756
            E + HR  Q  DG  L+GD S K  K IR+         K  +G++T+ NEY QVV QRP +     +L E+   LK   NR++  GF+   ++ TD CC DR ++Q            S H+ D   +    E     LP L+     +P +V    E    +     Q++   R     V G D EW   P G R  VA  Q++A  G + LFHL+       +   P  LK LL + +I
Sbjct:  339 EEYQHRLMQRWDGEVLSGDASFKFAKIIRLGARAGEERSKPVYGLFTVFNEYEQVVWQRPMK---TGALSELVEELKPFFNRFVRNGFKVFTLWNTDDCCDDRQLLQRVFREFEEATGISLHLEDEVDAGVQLE----LLPPLDLEF--TPAIV-YDPEAVAAACGSLRQIISLNRVEGKMVCGADAEWQFSPRG-REPVATFQIAALRGPSFLFHLQRGSSGFTKETFPAPLKALLEDSSI 569          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVB4_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.160e-10
Identity = 39/107 (36.45%), Postives = 56/107 (52.34%), Query Frame = 1
Query:   73 EHWYHRQQQLVDGTNLAGDESHKVVKAIRVS------HEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQ 375
            E + HR  Q  DG  L GD S K  K IR+         +  +G++T+ NEY QVV QRP +     +L E+   LK    R++  GF+   ++ TD CC DR ++Q
Sbjct:  106 EEYQHRLMQRWDGEVLGGDASFKFAKIIRLGARAGEERSRPVYGLFTVFNEYEQVVWQRPMK---TGALSELVEELKLFFMRFVRNGFKVPTLWNTDDCCDDRQLLQ 209          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7QG90_9FUNG)

HSP 1 Score: 72.0 bits (175), Expect = 1.170e-10
Identity = 69/263 (26.24%), Postives = 115/263 (43.73%), Query Frame = 1
Query:    7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASP--ILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWS----------VRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTI 756
            YNG  PS+  L     +++    H+  +    + G  L  D S K++K + +V+    F G++T++NEYG++ MQ     V   S   + P  + + + Y        Q+ +TD   GDRN ++  +   ++ V     S    E   R  P   FP    P  + V V S   E++S     L +    ++   +GFDIEW+           R +G    VALVQ+   DG T+ + L+         P  L++L+ +  I
Sbjct:  281 YNGYIPSSNYLSYVYRSLVAEYRHFTDQHTSQLGGIILKLDHSFKIIKHMGKVNGVSTFAGLFTVLNEYGEIRMQL---LVPSKSHNCLRPSFQNMMDSYRKFNSDMPQIAYTDNVTGDRNFLEEVIPSLTRDVVHVTPS--HRELVTRNNPYSSFPIATIPTNVPVTVLSTQQEINSACDTILGKVDGGTSKLHVGFDIEWTPSFAYPVGVRARLTGSPIPVALVQIY--DGETI-YLLRTYTFNSITFPIKLRQLIESPKI 535          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FPQ5_PROLT)

HSP 1 Score: 68.2 bits (165), Expect = 2.680e-9
Identity = 64/256 (25.00%), Postives = 113/256 (44.14%), Query Frame = 1
Query:    7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHK-VVKAIRVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPA----VLGFDIEWSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQ 759
            YNG  PS   L       M  ++    ++  ++ GTN   D ++K  ++        +  GV+TI+NEY +V+        GV +L  +   +++  N Y  QGF    V +TD    DR ++Q+++      V   A       + E  L   +   G     V+V ++  E+   I   +L  A  +A +    V+G D EW   PS  R  + ++Q++  +   VL   K+ +   G LP +L  LL + +++
Sbjct:  333 YNGLVPSVHWLTDLFTKEMTRQKPKLDKRTSMLSGTNFGHDATYKGAMRLCAPDGTMIMVGVWTIVNEYNEVLGHLLTPTNGVDNLVAVLKAIESDLNYYHGQGF---VVCYTDNPKHDRKMMQASIKSLVAGVEPVA-------QYEAPLETAKLTYG-----VKVLAKEAEIDEAILKNILEDANDAAKSGKEIVVGLDAEWDSGPSAGRG-IDIIQIAYNESVHVLRVSKFTKDNGGQLPRSLIMLLEHPSVR 572          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK3_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 3.460e-6
Identity = 44/141 (31.21%), Postives = 68/141 (48.23%), Query Frame = 1
Query:    4 GYNGRPPSAAIL--------------KSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAIRV------SHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKAL-ANRYLTQGFR-PIQVYWTDLCCGD 360
            G N R PSA  L              K+   T   G  ++  R+ QLVDG  LAGD S K  K IR+      +  +  +G++TI+NEY QVV  +  +    AS+ ++   LK +   R++  GF+ P+ ++  DL   +
Sbjct:    6 GLNRRHPSAHYLGDIWHKWFYEMPMVKTWVTTDALGHVNYLQRRAQLVDGRLLAGDASFKYAKVIRLPTGPDGTRARPVYGIFTIMNEYDQVVFSKAMK---TASVHDLKSDLKMMFVQRFVGHGFKLPVILFTVDLAVAE 143          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A0A8H7V7G1_9FUNG)

HSP 1 Score: 56.2 bits (134), Expect = 1.630e-5
Identity = 64/256 (25.00%), Postives = 109/256 (42.58%), Query Frame = 1
Query:    7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQL----LRRARASAPAV-LGFDIEWSVRPSGPR--RQVALVQLS-ARDGYTVLFHLKYEERRRGI--LPTALKELL 741
            Y    P A  LK      M+  +     +   + G    GD S K++K + +++   VF  +YT+ NEY +VV+      V   SL             Y  QG  P  +++TD   G +  ++  L     +V          EE    + NL  PA  +      A +  +++++I   L    +  +   + AV LGFD+EW V     R  R+ +L+Q++   D + +   +  ++  RG   LPT L++LL
Sbjct:   68 YASSLPFATYLKYMYTFTMKFYKPLIDAEMVKLGGIIFKGDHSFKIIKKLGKINGSSVFTALYTVCNEYEEVVLML---LVHTKSLTHSEETFTKSFQNYSLQGQEPPLIFFTDNVLGHQKFLEDCLPSLKTNVEHIVIPKA-TEENNVSVSNL--PADVAVHEYTTAKQINDMATKIMNDLGDAFVEGSSDDSKAVYLGFDLEWVVYQKKERFYRRTSLIQIAYILDVFLLRLCMLPKKTDRGNHQLPTKLEQLL 317          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: 3'-5' (exonuclease domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7UVI0_9FUNG)

HSP 1 Score: 56.2 bits (134), Expect = 2.510e-5
Identity = 65/267 (24.34%), Postives = 110/267 (41.20%), Query Frame = 1
Query:    7 YNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVP----DFASSTYFAEEAERQLPNLEFPA------GASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSGPRR--QVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVNDTIQLVS 768
            Y G  P+   +++    ++E  +    +   L+DG    GD S K  K + ++    VF G+YT+ NEY ++V Q     V   +L  +    + +   Y   G      ++TD   GD+  ++       + V     D  +ST        QLP+    +      G     V+   E  E S RI          +  A +G D EW +  S      +V +VQL+ +    VL H+   +R    LPT+L  +L N++++ V 
Sbjct:  306 YAGFVPTGTYIRTLYTAIIEVLQPKMDKHMMLLDGKIFKGDHSFKFPKHMAKIEDTSVFTGLYTMTNEYEEIVHQV---LVPSKALSYLKHSFQKMRKAYTDYGHEMPIAFYTDNVKGDQTFVEGIFESLKEGVKPTSVDEMNSTGSNSCNYLQLPDAVEVSYICRDFGLMESSVKHLHEEIESSVRI----------NGEAAIGLDCEWDISYSQGVDICKVDVVQLAFKKKVYVL-HI---DRCWTSLPTSLVSILENESVKKVG 555          
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Match: Uncharacterized (protein n=1 Tax=Parasitella parasitica TaxID=35722 RepID=A0A0B7MZR0_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 8.660e-5
Identity = 49/177 (27.68%), Postives = 76/177 (42.94%), Query Frame = 1
Query:  109 GTNLAGDESHKVVKAI-RVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANRYLTQGFRPIQVYWTDLCCGDRNIIQS---TLGPASQHV--PDFASSTYFAEEAERQLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIEWSVRPSG 621
            G  L GD S K++K + +++   VF  +YT+ NEY +VVM      V   SL  +          Y  Q  +P  +++TD   GD+  ++    +L    QHV  P  A           +LP L+ PA     ++   +E  +L +     +        P  LGFDIEW    +G
Sbjct:   17 GIILKGDHSFKIIKKLGKINSSSVFTVLYTVCNEYEEVVMML---LVHTKSLTHLEDTFTKFFANYEYQNQQPPIIFFTDNILGDQAFLEKYPLSLRTDVQHVIIPKAAYDM-------TKLPLLQIPANVKISMLTTKNETNDLGTDF---VNGECDEPNPVYLGFDIEWVSSENG 180          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6766.14886.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
3'-5'1.320e-11697.80exonuclease domain-containing protein n=1 Tax=Ecto... [more]
3'-5'1.560e-1931.32exonuclease domain-containing protein n=1 Tax=Ecto... [more]
3'-5'1.850e-1831.40exonuclease domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized1.160e-1036.45protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
3'-5'1.170e-1026.24exonuclease domain-containing protein n=1 Tax=Muco... [more]
3'-5'2.680e-925.00exonuclease domain-containing protein n=1 Tax=Prot... [more]
3'-5'3.460e-631.21exonuclease domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized1.630e-525.00protein n=1 Tax=Mucor plumbeus TaxID=97098 RepID=A... [more]
3'-5'2.510e-524.34exonuclease domain-containing protein n=1 Tax=Muco... [more]
Uncharacterized8.660e-527.68protein n=1 Tax=Parasitella parasitica TaxID=35722... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6766contigE_fasciculatus_S2_contig6766:542..1668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score356.7
Seed ortholog evalue9.3e-96
Seed eggNOG ortholog2880.D7G0J2
Preferred nameWRN
Model size781
KEGG koko:K10900,ko:K20777
Hectar predicted targeting categoryother localisation
GOsGO:0000018,GO:0000019,GO:0000217,GO:0000287,GO:0000400,GO:0000403,GO:0000405,GO:0000723,GO:0000724,GO:0000725,GO:0000731,GO:0000738,GO:0000781,GO:0001302,GO:0001325,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003684,GO:0003824,GO:0004003,GO:0004386,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0005813,GO:0005815,GO:0005856,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006275,GO:0006281,GO:0006284,GO:0006302,GO:0006308,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0006996,GO:0007154,GO:0007275,GO:0007568,GO:0007569,GO:0008026,GO:0008094,GO:0008104,GO:0008150,GO:0008152,GO:0008156,GO:0008296,GO:0008297,GO:0008309,GO:0008310,GO:0008311,GO:0008408,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009267,GO:0009314,GO:0009378,GO:0009411,GO:0009416,GO:0009605,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010212,GO:0010225,GO:0010259,GO:0010332,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010941,GO:0015630,GO:0016043,GO:0016462,GO:0016604,GO:0016607,GO:0016787,GO:0016788,GO:0016796,GO:0016817,GO:0016818,GO:0016887,GO:0016895,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019439,GO:0022607,GO:0030145,GO:0031297,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032200,GO:0032356,GO:0032357,GO:0032392,GO:0032501,GO:0032502,GO:0032508,GO:0033036,GO:0033365,GO:0033554,GO:0034504,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0040008,GO:0040009,GO:0042162,GO:0042592,GO:0042594,GO:0042623,GO:0042802,GO:0042803,GO:0042981,GO:0042995,GO:0043005,GO:0043067,GO:0043085,GO:0043138,GO:0043140,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044446,GO:0044451,GO:0044464,GO:0044806,GO:0044877,GO:0045005,GO:0045910,GO:0045911,GO:0045934,GO:0045935,GO:0045950,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0046983,GO:0048478,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051276,GO:0051336,GO:0051345,GO:0051641,GO:0051716,GO:0051880,GO:0060249,GO:0060255,GO:0060542,GO:0061749,GO:0061820,GO:0061821,GO:0061849,GO:0062037,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070035,GO:0070336,GO:0070337,GO:0070727,GO:0071103,GO:0071214,GO:0071478,GO:0071479,GO:0071480,GO:0071496,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090656,GO:0090657,GO:0090737,GO:0097159,GO:0097458,GO:0098530,GO:0098687,GO:0104004,GO:0120025,GO:0140097,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901575,GO:1901576,GO:1902570,GO:1905773,GO:2000104,GO:2000112,GO:2000113
Exons3
EggNOG free text desc.3'-5' exonuclease activity
EggNOG OGsKOG4373@1,KOG4373@2759
EC3.1.11.1,3.6.4.12
Cds size780
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842333.12679-CDS-E_fasciculatus_S2_contig6766:541..9911696842333.12679-CDS-E_fasciculatus_S2_contig6766:541..991Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6766 542..991 -
1696842333.1412544-CDS-E_fasciculatus_S2_contig6766:1165..12671696842333.1412544-CDS-E_fasciculatus_S2_contig6766:1165..1267Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6766 1166..1267 -
1696842333.1523457-CDS-E_fasciculatus_S2_contig6766:1440..16681696842333.1523457-CDS-E_fasciculatus_S2_contig6766:1440..1668Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6766 1441..1668 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6766.14886.1prot_E_fasciculatus_S2_contig6766.14886.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6766 542..1668 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6766.14886.1

>prot_E_fasciculatus_S2_contig6766.14886.1 ID=prot_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=260bp
GGYNGRPPSAAILKSACETVMEGREHWYHRQQQLVDGTNLAGDESHKVVK
AIRVSHEKVFHGVYTIINEYGQVVMQRPKRQVGVASLGEIAPHLKALANR
YLTQGFRPIQVYWTDLCCGDRNIIQSTLGPASQHVPDFASSTYFAEEAER
QLPNLEFPAGASPILVRVASENCELSSRICLQLLRRARASAPAVLGFDIE
WSVRPSGPRRQVALVQLSARDGYTVLFHLKYEERRRGILPTALKELLVND
TIQLVSLVC*
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mRNA from alignment at E_fasciculatus_S2_contig6766:542..1668-

Legend: polypeptideCDS
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>mRNA_E_fasciculatus_S2_contig6766.14886.1 ID=mRNA_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1127bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6766:542..1668- (Ectocarpus fasciculatus EfasUO2)
GGCGGATACAACGGCCGCCCGCCGAGCGCTGCTATCTTGAAGAGTGCGTG CGAAACTGTGATGGAGGGAAGGGAGCATTGGTACCACCGGCAACAGCAGT TAGTGGATGGCACGAACTTGGCGGGTGACGAATCGCACAAGGTTGTGAAG GCCATCAGAGTGAGCCACGAAAAGGTTTTCCATGGAGTGTACACCATCAT CAACGAGTACGGCCAAGTGGTGATGCAGGTGAGGGGCTGCGATGCGGAGG CTGCGATGGGGCTTTTCACTGGACCGACGTTGACTCATTTTTTGCGAATC CACACTGTACCTATTGATGCTGCAGCATGCACAAAGTCTGTGGCATGATT ATAACTACCTCGTTGCCACCCCTTCTGCAATCTCTGTATTGCCCCAAATA GCGCCCGAAACGGCAAGTGGGCGTGGCATCTCTGGGCGAGATCGCTCCTC ATCTGAAGGCGCTCGCCAACCGGTACTTGACTCAGGGATTCCGCCCCATC CAGGTACGTCGATTCGGTCGGGTTGCGTGGTCGGTGATCTGAGCCCCCGG TATCTCTTGCCGGGTGTATGGAGAGTGTTTTTGGTACCGGTGTCGAAATG GCCACTAAGAGCGCTTGTTCCAATTTGTGAAACACGACTCAATCAAACGA TCTTGGGTTCTCGCCGGCGTTTCGCAGGTGTATTGGACGGATTTGTGCTG CGGAGACAGGAATATCATCCAGTCAACTCTTGGACCAGCATCTCAACATG TGCCAGACTTTGCGTCGTCAACATACTTTGCTGAAGAAGCTGAGCGGCAG CTTCCAAATCTCGAGTTCCCTGCCGGAGCCTCACCGATATTGGTGCGCGT GGCCAGCGAGAATTGCGAGCTCTCCAGCAGAATTTGTCTTCAGCTGTTGA GGCGCGCTCGGGCATCGGCTCCTGCGGTGCTCGGATTCGACATCGAGTGG AGTGTGCGCCCATCCGGGCCTCGTCGCCAAGTTGCACTCGTACAGTTATC AGCACGCGACGGCTACACGGTCCTTTTCCACCTCAAGTATGAAGAGCGGC GACGAGGGATCCTGCCCACAGCTCTCAAAGAACTGCTGGTCAACGACACC ATTCAGCTGGTAAGCTTGGTTTGCTGA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6766:542..1668-

>mRNA_E_fasciculatus_S2_contig6766.14886.1 ID=mRNA_E_fasciculatus_S2_contig6766.14886.1|Name=mRNA_E_fasciculatus_S2_contig6766.14886.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=780bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6766:542..1668- (Ectocarpus fasciculatus EfasUO2)
GGCGGATACAACGGCCGCCCGCCGAGCGCTGCTATCTTGAAGAGTGCGTG
CGAAACTGTGATGGAGGGAAGGGAGCATTGGTACCACCGGCAACAGCAGT
TAGTGGATGGCACGAACTTGGCGGGTGACGAATCGCACAAGGTTGTGAAG
GCCATCAGAGTGAGCCACGAAAAGGTTTTCCATGGAGTGTACACCATCAT
CAACGAGTACGGCCAAGTGGTGATGCAGCGCCCGAAACGGCAAGTGGGCG
TGGCATCTCTGGGCGAGATCGCTCCTCATCTGAAGGCGCTCGCCAACCGG
TACTTGACTCAGGGATTCCGCCCCATCCAGGTGTATTGGACGGATTTGTG
CTGCGGAGACAGGAATATCATCCAGTCAACTCTTGGACCAGCATCTCAAC
ATGTGCCAGACTTTGCGTCGTCAACATACTTTGCTGAAGAAGCTGAGCGG
CAGCTTCCAAATCTCGAGTTCCCTGCCGGAGCCTCACCGATATTGGTGCG
CGTGGCCAGCGAGAATTGCGAGCTCTCCAGCAGAATTTGTCTTCAGCTGT
TGAGGCGCGCTCGGGCATCGGCTCCTGCGGTGCTCGGATTCGACATCGAG
TGGAGTGTGCGCCCATCCGGGCCTCGTCGCCAAGTTGCACTCGTACAGTT
ATCAGCACGCGACGGCTACACGGTCCTTTTCCACCTCAAGTATGAAGAGC
GGCGACGAGGGATCCTGCCCACAGCTCTCAAAGAACTGCTGGTCAACGAC
ACCATTCAGCTGGTAAGCTTGGTTTGCTGA
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