mRNA_E_fasciculatus_S2_contig6760.14881.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6760.14881.1
Unique NamemRNA_E_fasciculatus_S2_contig6760.14881.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYW4_9PHAE)

HSP 1 Score: 563 bits (1451), Expect = 1.460e-186
Identity = 329/640 (51.41%), Postives = 415/640 (64.84%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSA---LQRS--GGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVAST---PPASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAMLEAL*T 1896
            RC+ SG QC Y  RRW L + HQ+QHQ +  DR+G +GR+++ QS+ PGA  T G LP KRFR SASPATGLVGMQENAFLSDFFGCVGF PLT+ SH+RE+MV++M++   LQ+S  GG   + G    MV+   W++ASE +QLPM+ STCTFWCAIALGAL KG P+ESV KY  LAHEAL KS     DAEVA AWA+LAY++G++GDLA +Q+YLALSES L+     G  +TLP+GF+EVV   +I ++ C Q +  S  AEE    Q+   A EGE+Y++VA SFKAFEQA   KA  Q ++  ++  EAE  G S+       A L   ++ AMGT+  +   + FEPLE  VDRP   GG+GSL IN  L F K  KGD QA +ER+ RCVEV+E YPG+C  T+ HHKAH +LVCLAAI DS ARAMY+RLR SYNSFRP+ + PVPP+EEW G+G FCD FYCRA+EGLVAS+ MK FS    D   DI   T GT  DK                STC  P+ II      PSE       G ++AS    P A P   H+     +  +HSDR +NS   + +A +S  R  ++  GG +++D ED  I   +WLDVTHAML+ + T
Sbjct:   51 RCVGSGGQCAYIMRRWHLLKPHQQQHQSQRPDRDGAHGREVL-QSAQPGALVTCGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVRIMASPAPLQQSAIGGACSEVGT---MVRAPCWNEASERNQLPMDASTCTFWCAIALGALAKGSPVESVAKYRHLAHEALTKSYPSSTDAEVATAWAMLAYMYGFMGDLARFQEYLALSESCLKCATAKGFVNTLPLGFAEVVLPVKIPNASCGQWETKSLDAEEYVPPQVADVAAEGELYKYVAHSFKAFEQAFQQKAYMQSARDVDTPGEAEGHGESDRNRWPASAFLPGEISEAMGTVFGDRNLLVFEPLEEAVDRPSIRGGIGSLLINGTLVFEKAAKGDRQATLERIGRCVEVFELYPGMCRCTIAHHKAHVMLVCLAAIGDSSARAMYDRLRGSYNSFRPSVSRPVPPWEEWQGLGAFCDDFYCRAMEGLVASDLMKAFSAPSLDG-FDICVETQGTGSDKS---------------STCDNPEKIIGAVPVRPSEVGGGS--GPTLASKTMIPVAPPASSHHAWCHMKTEIHSDRIENSLAHMTMADESLPRLPQLSAGGGLLEDNEDRSIFAEDWLDVTHAMLDTVST 668          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU10_ECTSI)

HSP 1 Score: 540 bits (1391), Expect = 2.370e-179
Identity = 304/562 (54.09%), Postives = 375/562 (66.73%), Query Frame = 1
Query:  223 MQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSA---LQRSG--GDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVASTPP-ASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAMLEAL 1890
            M+E+ FLSDFFGCVGF PLTTQSH+RE+MV+MM+A   LQ+    G  D++ RF E+ + AN  KAS+ +QLPMNP +CTFWCAIALGA+ KG P+ESV KYSQLA EAL KS S PADAEVAKAWA+LAYL G++GDLA YQ+YLA+SES+ RS +EHGST TLP+GF+EVV + E+SDSCC QRQ+     EE+A+ QLN AATEGEIY++VAQS KAFEQ +HA AN Q  K  E+  E ERDG S     S  ALL T ++NAM TL+ +G C +F PL+  +D                L F K    D  A +ER+ RC+EV+ERYPGLC GTMG+HKAH VLV LAAI DSRARAMY RLR SYN FR A + PVP  EEWHGV TFCD  YCRAIE ++ SE     +    D  ID+ D   GTD  K EA L+G    Q E+ S C  P +I DT SD P+E       G SV S  P A+PV        S A + S+  +N    V +AP+S  R+ ++ +GG++ +D E +     +WLDVT+AML AL
Sbjct:    1 MEESVFLSDFFGCVGFLPLTTQSHIRETMVEMMTAPAPLQQPAIAGIWDEETRFSEIERRANCRKASDVNQLPMNPQSCTFWCAIALGAVAKGNPVESVEKYSQLAQEALPKSVSGPADAEVAKAWAMLAYLCGFMGDLARYQEYLAVSESFFRSSVEHGSTGTLPLGFAEVVKFTEVSDSCCGQRQINWSSGEEQAMPQLNEAATEGEIYRYVAQSLKAFEQGTHAIANEQRVKAGETPCEDERDGRSNGARPSRRALLPTEISNAMSTLMGSGGCTEFGPLQGVMDGN--------------LVFEKAATLDLDATLERVGRCIEVFERYPGLCRGTMGYHKAHMVLVWLAAIDDSRARAMYNRLRGSYNPFRRAGSRPVPLLEEWHGVATFCDDVYCRAIENIITSEPFTALAAPSIDG-IDVCDGAKGTDNCKGEAALVGSWQAQGEKLSACNIPPTITDTASDRPTESGAECGSGLSVVSKSPIATPVSSQNACTQSNAGLISNGVENGTTIVAVAPESFPRFSQVWEGGDLTNDTEGDGAAAEDWLDVTYAMLRAL 547          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU16_ECTSI)

HSP 1 Score: 509 bits (1310), Expect = 4.350e-167
Identity = 305/635 (48.03%), Postives = 360/635 (56.69%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMM--SALQRS--GGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVASTPP-ASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAMLEAL 1890
            RC+RSG+QCTY+KRR RL Q H++ H  R  DR+G +G ++   S+PPGA ATSGRLP  RF  SASPATGLVGMQENAFLSDFFGCVGF PLTTQSH+RE+MV +M   A+++S  GGD    G FD +  G  WSKAS GHQLPMNPSTCTFW                                          AWAI+ YL+G++GD A YQ YLALSES+LRS +E  STD LPVGF+EVV + E +DS C QRQM SF AEE+                                                                                     P      RP   GG+GSL IN+ L FVKG KGD  AA+ER+ RCV V+ERYPGLC GTMG+H AH VLVCLAAI D RARAMY+ LR +YNSFRPA +LPVPP EEWHGV  FCD  YCRAIE LVASEH+  FS    D  ID+GD TNGTD D  + TL G    Q    S C   Q +IDT SD P+E       GSSV ST P A PV  +Y    SE  +HS+R + S  SV +AP+  SR  ++ + G  ++D ED+ +G  +WLDVTHAML AL
Sbjct:   50 RCVRSGSQCTYSKRRRRLLQTHKQTHL-RQPDRDGAHGGEVPLHSTPPGALATSGRLPLARFGLSASPATGLVGMQENAFLSDFFGCVGFLPLTTQSHIRETMVNIMVSPAIRQSFVGGDFGAGGPFDSIAGGVEWSKASGGHQLPMNPSTCTFW------------------------------------------AWAIMGYLYGFMGDSARYQHYLALSESFLRSSMEERSTDNLPVGFAEVVKFKEFADSSCGQRQMKSFNAEEQT-----------------------------------------------------------------------------------NPQRRCHRRPTIRGGIGSLLINLTLVFVKGAKGDLNAALERVGRCVAVFERYPGLCSGTMGYHNAHIVLVCLAAISDPRARAMYDSLRATYNSFRPAGSLPVPPLEEWHGVDVFCDDCYCRAIEQLVASEHITTFSAPSVDT-IDVGDGTNGTDSDHADETLPGHGQSQPAWPSACNTSQMVIDTVSDWPTERGAEHRRGSSVGSTSPTARPVCSNYLCYQSEDGLHSNRVEASFASVAMAPEPLSRIKELSEDGGWMEDREDDGVGAEDWLDVTHAMLGAL 557          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU09_ECTSI)

HSP 1 Score: 506 bits (1304), Expect = 2.710e-166
Identity = 298/581 (51.29%), Postives = 371/581 (63.86%), Query Frame = 1
Query:  169 LPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSA---LQRSGGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVAST--PPASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAMLEAL*T 1896
            LP KRFR +ASPATGLVGMQENAFLSDFFGCVGF PLT+ SH+RE+MVK+M++   LQ+S   G   G    MV+   W+KASE  QLPM+PSTCTFWCAIALGAL KG P+ESV KY  LAHEAL KS    ADAEVA AWA+LAY++G++GDLA +Q+YLALSES+L+S      TDTLP+GF+EVV   +I ++ C Q +  S  AEE    QL   A EGE+Y+++AQSFKAFEQA   KA  Q ++  E+  E E  G S+   +   ALL   ++ AMGT+  +   + FEPLE  VDR               L F K  KGD +A +ER+ RCVEV+E YPG+C  T+ HHKAH +LVCLAAI DS ARAMY+RLR SYNSFRPA +LPVPP EEW GVG FCD FYCRA+EGLVAS+ MK FS    D   D+     GT  DK                STC  P+  I T    PSE       GS++AST  P A P   H+     +A  HSD+ ++S   + +A +S  R  ++ +G  +++D ED  I   +WLD THAML+ + T
Sbjct:    2 LPLKRFRLTASPATGLVGMQENAFLSDFFGCVGFVPLTSHSHIRETMVKIMASPAPLQQSA-IGGAFGGVGSMVRARCWNKASEKPQLPMDPSTCTFWCAIALGALAKGCPVESVAKYRHLAHEALTKSYPSSADAEVATAWAMLAYVYGFMGDLAKFQEYLALSESFLKSATAKRCTDTLPLGFAEVVLPVKIPNASCGQWETKSLDAEERVPPQLADVAAEGELYKYIAQSFKAFEQAFQQKAYKQSARDVETPGETEGHGESDRNRRRPSALLPGEISEAMGTVFGDRNLLVFEPLEEAVDR--------------TLVFEKAAKGDRRATLERIGRCVEVFELYPGMCRCTISHHKAHIMLVCLAAIGDSSARAMYDRLRGSYNSFRPAGSLPVPPLEEWQGVGAFCDDFYCRAMEGLVASDLMKAFSAPCVDG-FDVCVGAKGTGSDK---------------LSTCDNPEENIGTVPVRPSEGGGGS--GSTLASTMIPVAPPASSHHAWCHLKAEFHSDQIESSVALMTMADESLPRLPQLSEGSGLLEDNEDRSIFADDWLDATHAMLDTVST 549          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZI7_ECTSI)

HSP 1 Score: 441 bits (1133), Expect = 9.400e-145
Identity = 227/286 (79.37%), Postives = 253/286 (88.46%), Query Frame = 1
Query:  223 MQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSALQRS--GGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDR 1074
            MQE+AFLSDFFGCVGFFPL TQS +R SMVK+M+ LQ S  GGD  +QGRFD +V+GA+WSKASEGHQ+PMNPS+CTFWCAIALGALVKG PI SVTKYSQLAHEALAKSNS PAD EVAKAWAILAYLHGW+GDLA YQQYLALSESY+RS+ +HGSTD LPVGFSEVVTYAEISDSCCE+R M SF+ EEE++ QLN AATEGEIYQHVAQSFKAFEQASHA A+AQM K RE+QSEAE DG SE V  SD+ LLC A++NAMGT+L +GRC+DFEPLEATVDR
Sbjct:    1 MQESAFLSDFFGCVGFFPLATQSEIRASMVKIMTTLQSSAVGGDFGEQGRFDAIVRGADWSKASEGHQIPMNPSSCTFWCAIALGALVKGHPIGSVTKYSQLAHEALAKSNSAPADVEVAKAWAILAYLHGWMGDLAQYQQYLALSESYVRSFSKHGSTDALPVGFSEVVTYAEISDSCCEERLMKSFVTEEESIFQLNEAATEGEIYQHVAQSFKAFEQASHAIASAQMWKPRETQSEAEGDGRSERVRPSDNPLLCMAISNAMGTVLQSGRCLDFEPLEATVDR 286          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCW5_ECTSI)

HSP 1 Score: 433 bits (1113), Expect = 6.500e-138
Identity = 258/564 (45.74%), Postives = 340/564 (60.28%), Query Frame = 1
Query:  223 MQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSALQRS-----GGDGDQQGRFDEMV-QGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSF-IAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRE-RRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVASTPPASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWF-KMGDGGEMVDDAEDECIGTGNWLDVTHAMLEA 1887
            MQENAFLSDFFGC GF PL T SH+RE+MVK+M     S     G D D+ G + E V +G + SK S G++LPM+PS CTFWCA+ALGAL KG PIESVT Y++LA  ALA SNSDPAD EVAKAW ILA LHG++GD+  +++YLALS+S++ S IE GSTD LPVGF+E+V + E +++ C +  +  F + E     QL+  ATE E+YQ+VAQS +AFE+A +  A  Q ++  +   ++E  G  + V  S    +   L+NAMG LL NG CI FEPLE  VDRP   GG+G+L IN  L F K  KGD +A +ER+ RC+EV ERYPGLC   +G H  H +L+CL A  DS ARAMY+R+R ++NS RP+  LPVPPFEEW GV  FCD+  CRAIEGLV S +M+ FS +  D  IDI D   GT    D+  L G  + + E   +    P +I+ T    P         G   +  PP  P  F        + V S        S     D   RW  +  +    ++  +++ +   +WLD   A+ +A
Sbjct:    1 MQENAFLSDFFGCNGFLPLATPSHIRETMVKIMLPPASSQQPVLGDDCDEGGHYFEAVARGGDLSKTSAGNRLPMDPSACTFWCAVALGALAKGSPIESVTSYARLAQAALANSNSDPADTEVAKAWVILANLHGFMGDMEGFEKYLALSDSFVTSSIEEGSTDALPVGFAEIVKFKEFANASCGEWPLECFSVQENNPPPQLSVVATEAELYQYVAQSCRAFERAVYTTATEQSARGGD-MCDSESHGRPDGVRPSPQDFMAGDLSNAMGVLLENGSCIHFEPLEEAVDRPSIRGGIGALLINGILVFEKAAKGDLRATLERIGRCIEVLERYPGLCRCMIGCHMTHMMLICLVAAGDSSARAMYDRVRGAFNSHRPSGYLPVPPFEEWCGVDAFCDHRCCRAIEGLVKSGNMRAFSAAPVDG-IDICDERRGTGSVIDDDVLHGHGHTEHEILPAPNNIPGTIVGT---APVWSTNRGAEGDMRSLPPPTQPPAF--------SPVSS--------SHACCQDEPIRWLAESSEADGKIEHMDEDDVAEEDWLDAARAISDA 543          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU08_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 4.390e-133
Identity = 246/508 (48.43%), Postives = 323/508 (63.58%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMS--ALQRSGGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGTDGDK 1518
            RC++S + C ++KRRW L +  Q++ +P+    +G +GR+ + +++PPG  ATSG LP KRFR SASPA GLVGMQEN FL+DFFGCVGF PLTTQ H+RE+MVKMM+  A +R            +   G +  +A E + L M PSTC FWCA+ALGALV        +KYS+LA +ALA S   PAD EV KAWAILAYL+G++G+L                            GF+E+V + +I++S C Q +  SF A+E+A  QL  AATE E+YQ+VAQSF+AFEQ  H  A+   +   +   +A  DG S+++LQSD  LL   +ANAMGT+ A+G  +DFEPLE  VDRP   GG+GSL +N  L F K  KGD   A++R+ RCV+++ERYPGLC   +G H AH +LV LAAI D RA+AMY+RLR SYNS RP+ +  VPP EEWHGV  FCD  YCRAI+  + +  +K FS    +  ID    T G D D+
Sbjct:   47 RCVKSRSPCKFSKRRWHLPKPPQQEGRPQRLHGDGTHGREPLLKATPPGEFATSGLLPMKRFRLSASPAIGLVGMQENTFLTDFFGCVGFLPLTTQRHIRETMVKMMASPASRR------------QSAAGTDCDEAPELNLL-MGPSTCIFWCAVALGALV--------SKYSELAQKALATSYPGPADLEVGKAWAILAYLYGFMGNL----------------------------GFAEIVKHKDIANSSCGQWEKKSFCAQEQATPQLKEAATEVELYQYVAQSFRAFEQTVHVTASINSATAGDHLCQAASDGRSDTLLQSDHVLLPGEVANAMGTVSASGNFLDFEPLEEAVDRPSVRGGIGSLQVNSTLVFKKAAKGDVHGALKRVGRCVQIFERYPGLCRSMIGCHLAHMMLVSLAAIGDPRAQAMYDRLRESYNSCRPSGSRLVPPLEEWHGVVAFCDDVYCRAID--LFAHKLKAFSAPPVNS-IDAPVETEGADADR 502          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU13_ECTSI)

HSP 1 Score: 395 bits (1015), Expect = 1.190e-124
Identity = 225/415 (54.22%), Postives = 273/415 (65.78%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMSA---LQRS--GGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMG 1230
            RC+R+G+ CTY+KRRW L Q H +QHQPR   R+  + ++++ QSSPP A  +S RLP KR R SASPA GLVGMQE+AFLSDFFGCVGF PLTT+S +RE+MV++M+    LQR   GG  D++  FD + +G +   ASEGHQ PMNP +CTFWCAIALGAL KG P ESV KYSQLAHEALAKS S PADAEVAKAWA+LAYLHG++GDL  +Q+Y A+SES  RS I+ GSTD LPVGF+EVV++    D C  QRQ  S  AEE+ + QLN A TE                     A  + +   ES  +AERDG  E      DALL   ++ AM  +L +G C +FEPLE  VDR               LAF K  KGD  A +ER+ RCVEVYERYPG+C  TMG
Sbjct:   45 RCVRTGSNCTYSKRRWHLPQPHGQQHQPRPSRRDRTHRKEVLLQSSPPEALVSSARLPLKRLRLSASPAVGLVGMQESAFLSDFFGCVGFLPLTTRSTIREAMVQIMATPATLQRPAVGGGCDEEALFDAIARGEDLINASEGHQHPMNPRSCTFWCAIALGALAKGSPFESVAKYSQLAHEALAKSKSGPADAEVAKAWAMLAYLHGFMGDLERHQEYKAVSESLFRSSIDRGSTDNLPVGFAEVVSFTAFDDPCGGQRQRKSSSAEEQGMPQLNEAVTE---------------------AQERSTTTGESPCKAERDGRLEGARPFHDALLPKDISTAMVAVLESGGCPNFEPLERAVDRN--------------LAFTKAAKGDVHATLERIGRCVEVYERYPGVCRDTMG 424          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBJ1_9PHAE)

HSP 1 Score: 392 bits (1007), Expect = 1.550e-120
Identity = 275/662 (41.54%), Postives = 363/662 (54.83%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMMS---ALQRSGG--DGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAE---ISDSCCEQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSE--AERDG----PSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLC-CGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFS----------GSQEDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEXXXXXXXGSSVASTPPASPVFFHYPSRLSEARVHS---DRFK-----NSGRSVVIAP--DSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAML 1881
            RC+RSG QCTY+KR+    Q  Q QHQ R R    +   +L+R SS  GA   SG LP KRFR SASPATGLVGMQENAFLSDFFGCVGF PLTT SH+R  MV+MM+   A  + G   D  +Q +FD ++        + G QL   PS CTFWCA+ +GALV G P+E V  YS LA +AL  + + P +AEVAKAWAIL Y +G++GD  T+Q+YL LS+S+L   IE GSTD LP GF+E++ + +   +     +   +    A      Q N AATE +++++V QS  AFEQ    K     + IR    +   E DG    P  +  Q+++      +++AM T L +G  IDFE L+  VDR     G+G L IN+ LA  K  KGD   A+ERL  CVEV+ERYPG+C C  +  H +H +L  LAAI DSRAR +Y+RLR  YN  R +D+LP PP EEW G+  FCD F CR  EG++AS+ +  FS          GSQ     +  D     D     + +   V ++    +   AP S  D      S           ++  PP  P        LS + VH    DR         G S V+AP  + S RW ++     + ++  D+ I T +WLDVTHAML
Sbjct:   40 RCLRSGVQCTYSKRKPHQPQT-QHQHQRRPRGPACMPSTELLRHSSS-GALQASGMLPLKRFRLSASPATGLVGMQENAFLSDFFGCVGFLPLTTPSHIRGEMVRMMTLSTAPHQLGASYDSPEQCQFDAIL---TEDGITTGSQLSTGPSACTFWCAVGVGALVNGSPVELVGNYSGLARDAL-NAYTGPVNAEVAKAWAILGYFYGFMGDTTTFQEYLGLSDSFLTDSIERGSTDILPAGFAEIIRHKQTVKVYAGNLDAAYIDFLGARRRDPPQANPAATELDVFRYVTQSHTAFEQLVFEKVCENSATIRPLSDDEPCEDDGGCGSPHGNPPQAEE------VSDAMVTGLRDG-LIDFEHLQEAVDRSNIRQGIGGLLINMNLALQKAGKGDAGGALERLRHCVEVFERYPGVCRCMMLWCHVSHSILGALAAINDSRARELYDRLRNVYNPSRSSDSLPAPPLEEWRGMSAFCDDFQCRCFEGIIASQALSVFSTPTLCASNCAGSQGAQCKE--DYLQAADEQHHTSIVPAGVILENATGTMMDAPCSNGDKPMSSTSSWELNQKPAPQMS--PPVGPS-------LSTSHVHCCEPDRGAVEGCGGGGVSGVVAPVPEMSLRWPELRQVDGVSEETGDDTIVTADWLDVTHAML 677          
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Match: Zn(2)-C6 (fungal-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU9_ECTSI)

HSP 1 Score: 390 bits (1001), Expect = 2.820e-120
Identity = 269/656 (41.01%), Postives = 354/656 (53.96%), Query Frame = 1
Query:    1 RCMRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASATSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRESMVKMM----SALQRSGGDGDQQGR--FDEMVQGANWSKASEGHQLPMNPSTCTFWCAIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLHGWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCCEQRQMGSF-IAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQMSKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPLEATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYPGLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVPPFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQ-EDIIIDIGDRTNGTDGDKDEATLLGDVNIQRERRSTCYA-PQSIIDTDSDGPSEXXXXXXXGSSVAS-TPPASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDGGEMVDDAEDECIGTGNWLDVTHAMLEAL*TG**EPPC--GDQPG 1932
            RC+RSG+QCTY++RR    +A   QHQP+  DRNG+  +D++  S+  GA  TSG LPFK                                    SH+RE+MVK+M    S+ Q   GD   +G   F+ +  G + SK S G+QL M+PS CTFWCA+ALGALVKG PIESVT Y+QLA EALA SNS P +AEVAKAW ILA LHG++GD   +++YLALS S+LRS IE GS DTLPVGF+E+V + +I++  C + QM SF +  E    QLN AATE E+Y++V++S  AFE+A +     Q         ++E  G    VL   +    +  + A+ +LL +G  IDF PL+  VDR     G+G LFI+         KGD  A  ER+ RC+EV ERYPGLC   +G H  H +L+CLAA  DS  RA+Y+RLR   NSFRP  + PVP F EW GVG FCD  +CR+IE LV   HM+ F     E I  D G  T+ T  D DE    G    QRE  +   + P  II T    P++          +A    P SP+   +    SEA ++S       R V     S     +  +     +D  ++ I   +WLD  HA+ +A        PC  GD  G
Sbjct:   23 RCVRSGDQCTYSERRRYGERARMRQHQPQGPDRNGIKAKDVLLHSTT-GALVTSGVLPFK------------------------------------SHIRETMVKIMLPPASSQQPVLGDNCDEGERYFEAVAPGGDLSKISAGNQLAMDPSACTFWCAVALGALVKGSPIESVTSYAQLAEEALANSNSGPGNAEVAKAWVILANLHGFMGDKERFEKYLALSGSFLRSSIEQGSIDTLPVGFAEIVKFKDIANVSCGEWQMESFPVQGENLPPQLNEAATEAELYRYVSRSCVAFEEAIYTTMIEQSESGGNGLCDSEPHGRPGGVLPLPEDFTASDFSKALKSLLDDGDGIDFGPLQEAVDRSSIRRGIGVLFIDGPCIVETAAKGDLHATRERMGRCIEVLERYPGLCRCMIGCHMTHVLLMCLAAAGDSSDRAVYDRLRVISNSFRPPGSQPVPSFVEWRGVGAFCDEIFCRSIEVLVPCGHMRPFLEPPIEGIDADFG--TSATGSDIDEGAPHGHGYTQRESLTAFNSIPGKIIGTAPVWPTDSGVESDIVPFLAPRAQPTSPISSRHAFGQSEAGLYS---VGVARGVTTPEPSLLGLLESTERDRKPEDTGEDGIVEEDWLDAAHAISDA--------PCDGGDDTG 628          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6760.14881.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Zn(2)-C61.460e-18651.41fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized2.370e-17954.09protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Zn(2)-C64.350e-16748.03fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Uncharacterized2.710e-16651.29protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.400e-14579.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.500e-13845.74protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.390e-13348.43protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Zn(2)-C61.190e-12454.22fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Zn(2)-C61.550e-12041.54fungal-type domain-containing protein n=1 Tax=Ecto... [more]
Zn(2)-C62.820e-12041.01fungal-type domain-containing protein n=1 Tax=Ecto... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6760contigE_fasciculatus_S2_contig6760:403..7263 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Stop1
Start1
Model size2886
Hectar predicted targeting categoryother localisation
Exons12
Cds size1887
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842332.7028599-UTR-E_fasciculatus_S2_contig6760:402..4081696842332.7028599-UTR-E_fasciculatus_S2_contig6760:402..408Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6760 403..408 +
1696842332.8309195-UTR-E_fasciculatus_S2_contig6760:6270..72631696842332.8309195-UTR-E_fasciculatus_S2_contig6760:6270..7263Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig6760 6271..7263 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842332.7137432-CDS-E_fasciculatus_S2_contig6760:408..5841696842332.7137432-CDS-E_fasciculatus_S2_contig6760:408..584Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 409..584 +
1696842332.7237751-CDS-E_fasciculatus_S2_contig6760:1255..13631696842332.7237751-CDS-E_fasciculatus_S2_contig6760:1255..1363Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 1256..1363 +
1696842332.7335658-CDS-E_fasciculatus_S2_contig6760:1576..17871696842332.7335658-CDS-E_fasciculatus_S2_contig6760:1576..1787Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 1577..1787 +
1696842332.7450519-CDS-E_fasciculatus_S2_contig6760:1979..20561696842332.7450519-CDS-E_fasciculatus_S2_contig6760:1979..2056Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 1980..2056 +
1696842332.754502-CDS-E_fasciculatus_S2_contig6760:2309..23551696842332.754502-CDS-E_fasciculatus_S2_contig6760:2309..2355Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 2310..2355 +
1696842332.7633054-CDS-E_fasciculatus_S2_contig6760:2585..26691696842332.7633054-CDS-E_fasciculatus_S2_contig6760:2585..2669Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 2586..2669 +
1696842332.772228-CDS-E_fasciculatus_S2_contig6760:2940..30391696842332.772228-CDS-E_fasciculatus_S2_contig6760:2940..3039Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 2941..3039 +
1696842332.7815945-CDS-E_fasciculatus_S2_contig6760:3480..37461696842332.7815945-CDS-E_fasciculatus_S2_contig6760:3480..3746Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 3481..3746 +
1696842332.7914114-CDS-E_fasciculatus_S2_contig6760:4008..40501696842332.7914114-CDS-E_fasciculatus_S2_contig6760:4008..4050Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 4009..4050 +
1696842332.8013005-CDS-E_fasciculatus_S2_contig6760:4345..44591696842332.8013005-CDS-E_fasciculatus_S2_contig6760:4345..4459Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 4346..4459 +
1696842332.811601-CDS-E_fasciculatus_S2_contig6760:5329..55091696842332.811601-CDS-E_fasciculatus_S2_contig6760:5329..5509Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 5330..5509 +
1696842332.8214374-CDS-E_fasciculatus_S2_contig6760:5786..62701696842332.8214374-CDS-E_fasciculatus_S2_contig6760:5786..6270Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6760 5787..6270 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6760.14881.1prot_E_fasciculatus_S2_contig6760.14881.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6760 409..6270 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6760.14881.1

>prot_E_fasciculatus_S2_contig6760.14881.1 ID=prot_E_fasciculatus_S2_contig6760.14881.1|Name=mRNA_E_fasciculatus_S2_contig6760.14881.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=629bp
MRSGNQCTYNKRRWRLTQAHQEQHQPRSRDRNGVNGRDLMRQSSPPGASA
TSGRLPFKRFRFSASPATGLVGMQENAFLSDFFGCVGFFPLTTQSHVRES
MVKMMSALQRSGGDGDQQGRFDEMVQGANWSKASEGHQLPMNPSTCTFWC
AIALGALVKGRPIESVTKYSQLAHEALAKSNSDPADAEVAKAWAILAYLH
GWIGDLATYQQYLALSESYLRSYIEHGSTDTLPVGFSEVVTYAEISDSCC
EQRQMGSFIAEEEAVSQLNGAATEGEIYQHVAQSFKAFEQASHAKANAQM
SKIRESQSEAERDGPSESVLQSDDALLCTALANAMGTLLANGRCIDFEPL
EATVDRPGFGGGVGSLFINVALAFVKGVKGDPQAAMERLSRCVEVYERYP
GLCCGTMGHHKAHFVLVCLAAIKDSRARAMYERLRRSYNSFRPADALPVP
PFEEWHGVGTFCDYFYCRAIEGLVASEHMKDFSGSQEDIIIDIGDRTNGT
DGDKDEATLLGDVNIQRERRSTCYAPQSIIDTDSDGPSEGGADGGTGSSV
ASTPPASPVFFHYPSRLSEARVHSDRFKNSGRSVVIAPDSSSRWFKMGDG
GEMVDDAEDECIGTGNWLDVTHAMLEAL*
back to top

mRNA from alignment at E_fasciculatus_S2_contig6760:403..7263+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6760.14881.1 ID=mRNA_E_fasciculatus_S2_contig6760.14881.1|Name=mRNA_E_fasciculatus_S2_contig6760.14881.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6861bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6760:403..7263+ (Ectocarpus fasciculatus EfasUO2)
CGCTGTATGCGGTCAGGCAACCAGTGCACGTACAATAAACGACGGTGGCG TCTTACCCAAGCACACCAGGAGCAACATCAGCCTCGGTCACGTGACCGTA ATGGCGTGAACGGTAGAGATCTCATGCGTCAATCCTCACCACCCGGGGCA TCCGCTACATCCGGCAGGTTACCGTTCAAGAGGTACCGTAGATCACAGCC TTCCCATTGCCTTGCGCATCGCTGTATCACTTTGGACATGTCGACCAACA CATTGTGGCGACCGAAAACGGATGGGCTCAGACGTGCTGTGCTAGTTCTC GAACCATGTCACAGTCCATCGGTTGTTTGGCAACCGTCGAATCGACCTGC TACGAGAGGTGTTGGGTTGGTAATGGGATTCGACTGCAGGATCAGCCGAA TCCGCCGGCCCACTCGGTATCGCCTCAAGCAGTGCTACCACGCGGTCGAG TTGGCGGTCTTCATGGCGATTTTTCCTGTCGGAATGCACAAGACCCAACC CTAGCACCTATTAAGAGTGCACTGACCTCACACCGAGCCCAGTTGATTCG GGTTAGGGTTTTAGGAGAGGCGTTTGAAACCAGGAGCAAAACATAGGAAA TATTTTTGTCTTGGTGTTTCAACCATTCGTTTGACACATTTTAGTCGGGT CGTTGCCAGTTGGTTGTGGTTGCATACTCTGATGTTGCACCGGTAGCGAC CAACGGTGAGATTTCGGCTACGCAGGTTTCGTTTCCTGCGACATCTGTAG GAAGCCTAACACTTGGCTTCTGTTAGGGTGGTTCAGCCTAGCCGAGCACC TGGTCAGGAGTGACGTCTGTCTTCGTTCTGCCTTTGCCTGACGTCACATT CAGGTTCAGGTTTAGTGCATCACCGGCAACCGGTCTCGTGGGAATGCAGG AGAACGCCTTCCTCAGCGACTTCTTCGGTTGCGTTGGCTTTTTCCCGCTA ACCACCCAGAGGTATCGCTTGTAGGTGTCTATGCAAGGAGTTTCAGGTTT TGGGAAGCGAGATGGTTCCGTTGCACGTCGAATCTTGGCAGTCTGACCAA GTCATTGAAGTGGCGGTAGCATCTCGCGGTACGGGTGTTATTCTGGGCGC TATTGACTTGCCCTTACTACGCCTAGCCCCGTTGGTTCATGGTACACGTG CGGTGGTTTCGCTGTGATTGCCAGTCACGTTCGCGAGTCGATGGTGAAGA TGATGTCAGCTCTGCAGCGGTCTGGGGGTGACGGTGACCAGCAAGGGCGC TTCGATGAGATGGTACAAGGAGCGAACTGGAGCAAGGCCTCGGAAGGGCA TCAGCTTCCCATGAACCCGTCCACTTGCACATTCTGGTGTGCAATTGCCC TGGGGGCACTTGTGAAGGGCCGTCCCATCGAATCGGTATGAAGCGGCGTG GGTTCTCTCTCTGTGTTGATAAAAAACGAATTTCAATACATGTGTAAACG GAACCATTCTTATCCCCGTTCCTACCTACATGTCGTGGGATTTATTTTTG TGGAGTGCAGTTCGTTTACGGAGTACCATGTGGCTTGCTAATGCGACAGT CTTTCACGCCATGGTACTTGTTGAAAGGTGACCAAGTACTCTCAACTGGC CCACGAAGCCCTGGCCAAGAGCAACTCAGATCCCGCAGACGCCGAGGTCG CGAAGTGAGTCGATGAGGGATATCCTGCACCAAGATCACCAATGCCCTTT GCGTTTTAGGGTCGCCTCTTTCCAAGCACGTCTACCATACAACTTCGCAC TGTAGCTTCAACCGCACGACTCTAGTATTGATGTTCCTGCAAGGATGGCC GAACTACATAATGCAATGGGGAGCACTCAATTCTACGAACATTCACGGCA ATTGCCGTAGAATGGAGCGCTAACATCCCTTCAATATGTCGTTTTATCGC TGCCCAGGGCATGGGCAATTCTGGCCTACTTGCACGGCTGGATAGGAGAC TTGGTGAGGCTTCAACCCTGACATGTCGTGGAAGTGCGTGTGCACTGCGG TTGGCGTTCGAAATCTCACGCATATTTTGAAGTTTTTTTTGCCACAGCAG GTTTCGTGAATGGACATTGTGAGTGGATCGGTGCACCCACCCGCTTGCAT CACGATAGAAATGATTTGCTCCAGCTGGTCTTCCAACAGATTTTCCCCGC TTTTTCCGCTCCACCGTTACGTCAATGCTGCAGGCAACGTATCAACAGTA CCTGGCTCTTTCGGAGTCATATTTGAGAAGTTATATCGAGCACGGGTCCA CAGATACTCTTCCAGTGGTGAGCCGTGCGTGTGCACCCGATTAGGGTTTA ATGTTGACCAAGGTAACACCAGCATGCCTCCTCTGTACTTTCTCTGCTGT TATGCGGGCGGCCGATCAATACCGGCGACGACAAGCCCTGTATAAGGCGA AGCGTGTGAATCGAAGAATGCACTCCCACGGCTGGTATTGATTCATTCCG ATTTCCTCTCCTCGCCTGATTCTATGGTTAGGCAGCTGTCGATATCGCTG ACATATCTACGCCTTGCATGCGACCGTGCGCTGACCAGGGGTTCTCCGAG GTTGTCACTTATGCGGAAATTTCCGACTCTTGCTGCGAACAGAGGCAGAT GGGGTCGTTTATCGCGGAAGAGGAAGCGGTGTCCCAGGTATGTGATTCGG TCACATCACAGAGTCTCGTGGACATGCTTTGAACCAGTGGTTTGATGGTC TGAGTACGTATTTCACGTGGCGGTTCGCTGTATTCTGACGAGGGACCTCT TCAGTGCCGATATGTGCCCAAACCGTTCATAGGTATTAATCGGGAACCGT TACTATTCAAAGTACGTACCGACTTGATATTTCAGTGTTTGTGAGCCGAA AACACCGGCACTATACCGGGCACCCGGCACTACTCGACCGGCACTAAAGA GGTCCCCCGACTGCATTCTGACGAGGTTGTCCACCGGGCAGCGTGTTTGG ATCATGGGAATAGGCCTTCAACACGTAGAGTGGCTAGTGAATGCCGTTGT TGTCTCTTTTCGCCACAATCATCTCTCTTGCCCATGGCCCACACCCGCAC ACCTCTTTTGGACACTCGGCGATCGCAGTTGAACGGAGCCGCCACCGAGG GCGAGATATATCAACATGTCGCTCAATCCTTCAAAGCGTTCGAGCAAGCT TCTCACGCAAAAGCGAATGCGCAGATGTCGAAGATACGCGAAAGCCAAAG CGAGGCTGAGCGTGATGGCCCATCAGAGTCAGTACTCCAATCCGACGACG CTCTTTTGTGTACGGCGCTTGCCAACGCTATGGGTACTTTGCTGGCTAAT GGGCGTTGCATCGATTTCGAGCCGCTTGAAGCAACGGTTGATCGGTGAGT CGAATAGAGAGATATGTGAGGCTACCAAAGGTCTTCAGGTACCTCGCTTG GCCCACGATGGGACAATAGGCTTGCACCGAGATCAGAGCGTGGACATCAG GAGCCATCGAGGCCCGACTATATACTGCTTGGCCTGGACAAAAAAAAGCT AGCCTCCTTGAATTGGTTCACATCCTTCCCATTCTCCCGCTGCTGTACAT CTCACGTCGCAATCGTCCTGCATGTCGACATGGGATACGGCCACTCTGGC GGGCAGCCCAGGGTTTGGTGGGGGTGTCGGCAGCCTCTTCATCAACGTGT AAGCCGTGGTGTGTGGAAGTCGTCGAACGCATGTGCCCATCCGATACCAC GCTTTCAGAGAGAGCCCCGACGAACTGTAGTTGCCAACAGGAGGTGTTGT ATTACTCGTGCTTTGGCAGTGGGTTAGTGGTACTCTCTCCATGATAATAA TGTAAGCCTGAGGTGCCGTTCATAATGGATGGCACTTCGTGTGGGCGGTG GCAACTACCAATGAGATGCACCGCTTCTGATCCGCTTTTCACGTGGTATG CTTTGGTCCTCATTGATTGTCTCGGAAACCTCGACAATGACAGGGCCCTT GCCTTTGTAAAGGGAGTAAAAGGCGATCCACAAGCCGCCATGGAGAGACT CAGCCGCTGCGTTGAGGTTTATGAGCGGTATCCTGGCTTGTGCTGCGGAA CGATGGGGTAAGTCGTTTGTGCGCCCTCGGCGCATGCAGAGGTGATGCAA CTAAGTGTCATTCACGTGGGGGACGTCGTGCACGTCGGGGAACACACGAC GTTCGCCAAGTCATCTGCCCCTTGCACTTTCACGATTGAAAATTCTTCGA TGATGCTTTGGCATGTGCGCGATACTCCACGACGAGAAACATGCGCAAAT TGTTTTGTACTTTCCGTTCATCGATTCCACCGTCCGGGTAGACGCATAAA CGTTCCGCGCTTATCGTGAGACGCCATCATCACCTGTGTTTGTCATTATT TTGCCTGGGGCTTGTAGGTCAGTGGCCTTGACTTTGTCGTTGGGAGATTT GTTTCTGGTACTGGTCAACAGCATCAGTGGGCCCGTCGTGTTGCATGGTA ACCCTCACCTCCTACATATTGTGGGTGTCTCAGGGTGCTTGCCTCGTTGG TAGTACACCCCACGCGAAACTAGCTGGCCGTTGGGGTGCAAAATTGTCTT GAAAAATCTGAGCGCACAGCGTTGGCATCTGTAAAATTCTACTGCTGCCT CCAGGCACTGCGGAGTGGAGTTGGATTGGGCGAGGGAATCACAGGACTCC CTAACCACTTCGAAGTCTTCGTGGACGTGCGATGATAATGTTTTCATTTG CAGTTAATAGTTGTGTTGGGGACACGATATATTTGGTATGCGCCTCGTTT AACCAACCAAGCAGAACACGGCGGAAGTATTTCATGATTGCAACAAGAAT GTACAGCAGTATGTTTGGTTGGCGGTCGCAACCATTGTCCTGGTGTACCG AACGGTATGCCCTAGAAAGTGACATCTACTATTGCATTCTGTTCCCGTGC CCCCCGCTGCCGAAATGTCCATGAAAGGCACCACAAGGCACACTTTGTAC TCGTATGCCTCGCAGCGATTAAAGACTCCAGGGCTCGAGCGATGTACGAG CGGTTGCGGAGGTCCTACAACTCATTCCGCCCAGCTGACGCTCTGCCTGT ACCCCCCTTTGAGGAGTGGCACGGAGTGGGGACCTTCTGTGACTATTTCT ACTGCAGGTACTTACTGCAGTTGCCTTGCCGATCGCAGATCATGGTATAT GGCCTGCGGACGTAGCACGACTTTCTTAGCATTGCTTTGGGCGGAAAGGA TTCCGGCGTTGGGTGATAGAAGAAAACGGAATTTCTCAACATGTGGCTCA CATTTGTACGCTGAAGTTCACACCGCGAAACCGGACGACGCTGGAACTCA CACCGCAACCCGGCCGACGAGATACTATTCAGTATCCTTCCCTCGATACG AATATAACCTTGGACATCACCATTCGCTTGGTAGGGCGATCGAGGGCCTC GTTGCAAGCGAGCACATGAAGGACTTCTCCGGGTCACAAGAAGACATTAT CATCGACATCGGTGATAGAACGAACGGCACGGATGGCGACAAAGACGAGG CGACTCTCCTCGGTGACGTGAACATCCAACGTGAAAGGCGATCAACCTGC TACGCCCCTCAGAGTATCATCGACACCGACTCCGACGGGCCATCTGAGGG TGGGGCCGACGGTGGTACGGGTTCAAGTGTAGCGTCGACACCTCCTGCTT CTCCAGTGTTCTTTCACTACCCATCCCGTCTGTCGGAGGCACGCGTTCAC TCCGACCGCTTCAAAAACAGTGGCCGCAGCGTGGTCATCGCTCCCGACTC ATCGTCGAGGTGGTTCAAAATGGGTGACGGGGGCGAGATGGTGGACGATG CGGAGGACGAATGCATTGGCACTGGGAATTGGTTGGATGTGACCCATGCC ATGTTAGAGGCACTCTGAACAGGGTGATAGGAGCCTCCTTGCGGAGACCA ACCTGGCTTGCAAGCTGTGCATATGGCAGACATAGAGACGCTTTGCTCTG CCTGTTTTGTTCCGCTTGAGCATGTCTATGGAACACTTGGAAGTATTTCA CAACATGTTTAATCTCGGCACGACCTTGTTGTAGCGAGTATGATCACCGT AGCCGATGATTTCGATGATGCCCGTTTCTTGGTCAATAGGATCGACTCAA TACTTTCGGCTGTTATGAAACTTCCATCACCCGGTATTTTTTTGCGATGG GATCGCCTCATTACTTTTGGCGGTTTGTGGAACTTTGTTGCCCATGCATG CTATCGAAAATCTGAGGACCACATTGAATATATAATGCTTCGATTATACA AGGCAAACTAACACGGGACTCACTGTGTATTGTATCCCACATACAACCCC TCCACGGAAATCTGACGAGGCCAAATCGCGGCAGTCGAACCACCCGTACA CAGTGGACATCACTCGCCTCCAAAATATGACCGTTTTTGTTCTTGTTTTT TTCTTTCGGAGGAGGGGACAGGGAGGTGATTTTTTTTGTTCATTTGTGCG GCCTTGGTTCCCTAGACCATGGGGATTGGTTTGTTGCAAAATTGCGGTAG AAATAGGTGGGAAGGGCCGGGTTGCATGTACAAAGAAATAATATATGCAC GGTGAAGGCCTCTGATTGGCTGAGACACATTCATTTCACGCTCGTGCTTG TGGCCACGGCTCGGATTGAAAACATTCCGGCCACGGCGATTCTCTCCCTT GCTCAGGGTCACTCTGATGTAATATGTGTACATATTTTCCCCTGGCAGCT GTGTTTGAATAACTTCGGTTGAAGGGTGCACAAATGATCTGACACCTCAC CCGCCCCCCCGGAGGGCACAAAAAATACAACGACTTTGTTCGTTTTTGGC GTGTTAAAAGCCTATTGAAACAAGGGGTACGGAGGGGACACATCTTCAAG ACTGGTCGAAC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6760:403..7263+

>mRNA_E_fasciculatus_S2_contig6760.14881.1 ID=mRNA_E_fasciculatus_S2_contig6760.14881.1|Name=mRNA_E_fasciculatus_S2_contig6760.14881.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1887bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6760:403..7263+ (Ectocarpus fasciculatus EfasUO2)
ATGCGGTCAGGCAACCAGTGCACGTACAATAAACGACGGTGGCGTCTTAC
CCAAGCACACCAGGAGCAACATCAGCCTCGGTCACGTGACCGTAATGGCG
TGAACGGTAGAGATCTCATGCGTCAATCCTCACCACCCGGGGCATCCGCT
ACATCCGGCAGGTTACCGTTCAAGAGGTTCAGGTTTAGTGCATCACCGGC
AACCGGTCTCGTGGGAATGCAGGAGAACGCCTTCCTCAGCGACTTCTTCG
GTTGCGTTGGCTTTTTCCCGCTAACCACCCAGAGTCACGTTCGCGAGTCG
ATGGTGAAGATGATGTCAGCTCTGCAGCGGTCTGGGGGTGACGGTGACCA
GCAAGGGCGCTTCGATGAGATGGTACAAGGAGCGAACTGGAGCAAGGCCT
CGGAAGGGCATCAGCTTCCCATGAACCCGTCCACTTGCACATTCTGGTGT
GCAATTGCCCTGGGGGCACTTGTGAAGGGCCGTCCCATCGAATCGGTGAC
CAAGTACTCTCAACTGGCCCACGAAGCCCTGGCCAAGAGCAACTCAGATC
CCGCAGACGCCGAGGTCGCGAAGGCATGGGCAATTCTGGCCTACTTGCAC
GGCTGGATAGGAGACTTGGCAACGTATCAACAGTACCTGGCTCTTTCGGA
GTCATATTTGAGAAGTTATATCGAGCACGGGTCCACAGATACTCTTCCAG
TGGGGTTCTCCGAGGTTGTCACTTATGCGGAAATTTCCGACTCTTGCTGC
GAACAGAGGCAGATGGGGTCGTTTATCGCGGAAGAGGAAGCGGTGTCCCA
GTTGAACGGAGCCGCCACCGAGGGCGAGATATATCAACATGTCGCTCAAT
CCTTCAAAGCGTTCGAGCAAGCTTCTCACGCAAAAGCGAATGCGCAGATG
TCGAAGATACGCGAAAGCCAAAGCGAGGCTGAGCGTGATGGCCCATCAGA
GTCAGTACTCCAATCCGACGACGCTCTTTTGTGTACGGCGCTTGCCAACG
CTATGGGTACTTTGCTGGCTAATGGGCGTTGCATCGATTTCGAGCCGCTT
GAAGCAACGGTTGATCGCCCAGGGTTTGGTGGGGGTGTCGGCAGCCTCTT
CATCAACGTGGCCCTTGCCTTTGTAAAGGGAGTAAAAGGCGATCCACAAG
CCGCCATGGAGAGACTCAGCCGCTGCGTTGAGGTTTATGAGCGGTATCCT
GGCTTGTGCTGCGGAACGATGGGGCACCACAAGGCACACTTTGTACTCGT
ATGCCTCGCAGCGATTAAAGACTCCAGGGCTCGAGCGATGTACGAGCGGT
TGCGGAGGTCCTACAACTCATTCCGCCCAGCTGACGCTCTGCCTGTACCC
CCCTTTGAGGAGTGGCACGGAGTGGGGACCTTCTGTGACTATTTCTACTG
CAGGGCGATCGAGGGCCTCGTTGCAAGCGAGCACATGAAGGACTTCTCCG
GGTCACAAGAAGACATTATCATCGACATCGGTGATAGAACGAACGGCACG
GATGGCGACAAAGACGAGGCGACTCTCCTCGGTGACGTGAACATCCAACG
TGAAAGGCGATCAACCTGCTACGCCCCTCAGAGTATCATCGACACCGACT
CCGACGGGCCATCTGAGGGTGGGGCCGACGGTGGTACGGGTTCAAGTGTA
GCGTCGACACCTCCTGCTTCTCCAGTGTTCTTTCACTACCCATCCCGTCT
GTCGGAGGCACGCGTTCACTCCGACCGCTTCAAAAACAGTGGCCGCAGCG
TGGTCATCGCTCCCGACTCATCGTCGAGGTGGTTCAAAATGGGTGACGGG
GGCGAGATGGTGGACGATGCGGAGGACGAATGCATTGGCACTGGGAATTG
GTTGGATGTGACCCATGCCATGTTAGAGGCACTCTGA
back to top