mRNA_E_fasciculatus_S2_contig6755.14872.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig6755.14872.1
Unique NamemRNA_E_fasciculatus_S2_contig6755.14872.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI)

HSP 1 Score: 536 bits (1380), Expect = 5.180e-191
Identity = 243/251 (96.81%), Postives = 248/251 (98.80%), Query Frame = 1
Query:    1 GWTEFRHAIPRWAQYWHKSCGRVYEEEGPESWDKMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQVL 753
            GWTEFRHAIPRW+QYWHKSCGRVYE+EGPESWD MPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGL+KYALQSGYRLRPCFTFGESDTYWNAQGMWK+RLWMAAKNLPGVCPWGTWWCPLLPRRV LMTVFGEPLALPKIEQPSPEDVDKWH AYVEELKALHGRHKAKYASNPQLEL+VL
Sbjct:  129 GWTEFRHAIPRWSQYWHKSCGRVYEKEGPESWDNMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLVKYALQSGYRLRPCFTFGESDTYWNAQGMWKLRLWMAAKNLPGVCPWGTWWCPLLPRRVKLMTVFGEPLALPKIEQPSPEDVDKWHAAYVEELKALHGRHKAKYASNPQLELKVL 379          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL97_9STRA)

HSP 1 Score: 271 bits (693), Expect = 3.100e-85
Identity = 124/255 (48.63%), Postives = 165/255 (64.71%), Query Frame = 1
Query:    4 WTEFRHAIPRWAQYWHKSCGRVYEEEGPE------SWDKMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            W  FR AIP W Q++H+     Y  E P       +    P T+ CYHPHGV +  +I+NG   +E    LGL+   LYHAP FR     W  +   ++K  F   MK     G+IPGG +EAT+S  G+DRV++K RKG IKYAL+ GY + P + FGE DTY N QG+W++RLW+ +  +PGVC WGTWWCPLLP   N+ TVFG+P  +P+I+ P+PED++KWH  YV+ELKAL+ RHK ++ASNP  EL+V
Sbjct:   78 WPAFRRAIPGWGQHYHRQV--AYHMEAPHEVLAGSNEGLTPGTLMCYHPHGVLSWSFILNGGFRKEFEPGLGLVVDGLYHAPFFRWFIADWTKTVQAANKPNFQRLMKSKALLGLIPGGLEEATISCKGKDRVYLKARKGFIKYALEFGYTIVPVYCFGECDTYHNLQGLWRLRLWLNSLKMPGVCFWGTWWCPLLPIPSNINTVFGKPFRVPQIDHPTPEDINKWHALYVQELKALYDRHKHQFASNPNQELEV 330          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9T5_HETAK)

HSP 1 Score: 259 bits (662), Expect = 1.590e-82
Identity = 117/251 (46.61%), Postives = 165/251 (65.74%), Query Frame = 1
Query:    4 WTEFRHAIPRWAQYWHKSCGRVYEEEGP--ESWDKMPPTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            W  F++ IP W Q +HK C  ++ E  P  E   K+    FCYHPHGV + G+++N         + G++A AL +APL+     RW  +  P+SK+     M+KG SFGIIPGGF+EAT+SKLG  RV++K RKG +KYAL+ GY L P +TFGESDTY+N QG W++RLW+ +  LPGV P+G WWCP++P++V L TV G+PL LP+I  PS  DV+KWH  YV+ L  +  ++K++    P  E+++
Sbjct:   89 WPAFKYTIPEWGQRYHKECNIIFVEGAPFDEDLHKLQRHAFCYHPHGVLSWGFVLNAGFRHFFEPLFGVVADALCYAPLWYWFVTRWTKAVRPASKKHMTRYMEKGESFGIIPGGFEEATISKLGAQRVYLKKRKGFVKYALKYGYALVPVYTFGESDTYYNVQGAWRLRLWLNSLQLPGVLPFGAWWCPIMPKQVRLTTVVGKPLQLPQISSPSQTDVNKWHEEYVKALLEVFEQNKSQ-CGYPDAEMEL 338          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Uncharacterized (protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LGP4_9EUKA)

HSP 1 Score: 192 bits (488), Expect = 9.590e-58
Identity = 93/214 (43.46%), Postives = 128/214 (59.81%), Query Frame = 1
Query:  109 PTVFCYHPHGVFTQGYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            PT+ C HPHG+F  G+ I  +  +E   +    ++ALY +P FR V     G  +P  K+   + MKK  +  +IPGGF+EA+L   G D +++K+RKG +KYALQ GY L P + FGE DT+WN  G WK RL++    +P V P G WWCP+LPR  NL  V GE L LP I  PSP DVD++H  Y++ L  L+ +H   Y  +    LQ+
Sbjct:   15 PTLLCVHPHGIFCLGWGIMFA-REETKDVHFCFSSALYQSPFFR-VLSMLIGKPSPVDKDTISNLMKKKANLALIPGGFEEASLFVKGTDVIYLKHRKGFVKYALQYGYSLTPVYVFGERDTFWNLPGFWKFRLFLNRFGIPAVVPVGQWWCPILPRPSNLHIVVGEALPLPHIPSPSPSDVDQYHHLYIQSLTRLYNKHFPTYHPSQTPNLQI 226          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXR2_9STRA)

HSP 1 Score: 184 bits (466), Expect = 4.710e-53
Identity = 96/227 (42.29%), Postives = 136/227 (59.91%), Query Frame = 1
Query:   79 EGPESWDKMPPTVFCYHPHGVFTQGYIINGSMNQELP--KILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLP-RRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            E  E   K   T+F +HPHGV   G+ +NG+MN      KI  L A  L+  P    V   W GS   ++K  F   MK+G +  ++PGGF+EATL   GE RV++K R G IKY LQ GY + P +TFGE +T++       +RLW+    +PGV P+GTWWC  +P R   L TV G+P+ LP+I+ P+ EDV K+H  Y++ L+ +  R+KAKYA++P+  L +
Sbjct:  113 EDTEPVAKQSKTMFAFHPHGVLCCGWSVNGAMNASWLDLKISWLAADVLFKLPFVSHVLS-WGGSDT-AAKPNFERLMKQGDNIALLPGGFEEATLFAKGEHRVYIKKRAGFIKYGLQCGYTVYPVYTFGEEETFYAVSWFLPLRLWLNRFQVPGVIPFGTWWCSYMPLRSAKLTTVVGKPIKLPRIDAPTREDVAKYHQVYMDALQGVFDRNKAKYATDPEATLHM 337          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CDP3_9STRA)

HSP 1 Score: 178 bits (452), Expect = 5.660e-53
Identity = 84/169 (49.70%), Postives = 113/169 (66.86%), Query Frame = 1
Query:  214 ALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKY 720
            ALY++P FRL+  +  G+  P+ K  FL  M++     +IPGGF+EAT++   + R+++K RKG +KYALQ+GY L P + FGES TY N QG WK R+W+    LP + P+G WW PLLPR  ++  V G+ L LP +  PS E+VDKWHG YVEE+ AL  RHKA Y
Sbjct:    1 ALYNSPFFRLLT-KCTGNPQPADKNTFLKLMQEEKPMAVIPGGFEEATVTSEIKHRLYLKKRKGFVKYALQNGYTLVPSYCFGESRTYSNLQGFWKFRMWLNGLGLPAIVPFGRWWFPLLPRNSDMHIVVGKGLQLPTLATPSKEEVDKWHGMYVEEVTALFDRHKANY 168          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CE87_9STRA)

HSP 1 Score: 178 bits (451), Expect = 7.000e-51
Identity = 95/241 (39.42%), Postives = 137/241 (56.85%), Query Frame = 1
Query:    4 WTEFRHAIPRWAQYWHKSCGRVYEEEGPESWDKMPPTVFCYHPHGVFTQGYIINGSMNQELPKILG--LLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPR-RVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAK 717
            W EFR  I       +     ++   G E   K   ++ CYHPHG    G+  NG+   EL  I    L+   L HAPLF  +  RW G+   +        MK+G + GIIPGGF++AT+ K G +R+W+K RKG IKYAL+ GYR+ P + FGE DT++    + K+R+ + A  +P V  +G  + PL PR  +N+ T  G+ + LPKI++P+ EDVDKWH  Y + L+ L  +HKA+
Sbjct:   83 WPEFRQLIKDMDPRCYYDHCELHLPHGVED-IKNEKSMLCYHPHGALCVGFSWNGAHAPELKHIPAKWLVVDVLMHAPLFGRIL-RWIGNVGGADAGNMKRLMKEGSNIGIIPGGFEDATIMKKGSERIWLKKRKGFIKYALRFGYRVHPVYNFGECDTFYTFHWLAKLRMKLNAFKIPAVFFFGNVFMPLFPRTNINMHTFIGKAIELPKIDEPTKEDVDKWHKTYCDALQVLFDKHKAE 321          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXZ4_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.810e-50
Identity = 98/242 (40.50%), Postives = 137/242 (56.61%), Query Frame = 1
Query:   43 YWHKSCGRVYEEEGPESWDKMPP---TVFCYHPHGVFTQGYIINGSMNQELPK--ILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLP-RRVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            Y+HK    V E+  P     +PP   T+  YHPHG+   G+ ++G+M+       I  L+A  L+  P        W G C+ ++K  F   MK+G +  ++PGGFQEATL   GE R+++  R G IKY LQ GY++ P + FGE  TY        VRLW+    LPG  P+GTWWC  +P     L TV G+P+ LP IE P+ +DV K+H  YV+ L+ L  R+KAKYA++P+  L V
Sbjct:   69 YFHKQA-LVREDPTP-----IPPASKTMLAYHPHGILCCGWSVHGAMHASWTSSNISWLVADVLFKLPFVSNAMS-WGG-CSSAAKRNFEGLMKQGENIALLPGGFQEATLYAKGEHRLFLHQRTGFIKYGLQYGYKVVPVYNFGEEHTYHAMSSFLGVRLWLNQFQLPGAVPFGTWWCAYMPLTSAELTTVVGKPIQLPHIENPTRDDVAKYHKIYVDALQDLFERNKAKYAADPKATLHV 302          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT81_9STRA)

HSP 1 Score: 176 bits (446), Expect = 2.200e-49
Identity = 99/243 (40.74%), Postives = 130/243 (53.50%), Query Frame = 1
Query:   46 WHKSCGRVYEEEGPESWDKMPPTVFCYHPHGVFTQGYIINGS----------------MNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAK-NLPGVCPWGTWWCPLLPR-RVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKY 720
            W K    +Y EE  ++ +     + C HPHG+FT G+I NGS                     P  + L+   L+  PL R     + G   P++K   L  M K    G++PGG +E  LS  G +RV++K+RKG IKYALQ GY +   +TFGE+D+Y       K RLW   +  +P    WG WWCPLLPR +V L TV G P  LPK+  PS ED+DKWHG YVE L  L  R+KAK+
Sbjct:  152 WFKGGTCLYLEESMKNVETSQSILLCQHPHGLFTYGFIQNGSAARIDARRPEIYVPTAFRHMKPNAVALVEPLLFKIPLIRHFITAF-GCARPATKHEMLYLMSKKKPLGLLPGGSEEIILSHHGHERVYIKHRKGFIKYALQHGYTICIGYTFGEADSYRTLDWAVKFRLWYLRRFRVPLFACWGIWWCPLLPRGQVALETVVGNPFQLPKLADPSKEDIDKWHGRYVELLVDLFERNKAKF 393          
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Match: Acyltransferase (n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GVN4_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.430e-48
Identity = 85/216 (39.35%), Postives = 126/216 (58.33%), Query Frame = 1
Query:  112 TVFCYHPHGVFTQGYIINGSMNQELPK--ILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLDQMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPCFTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPR-RVNLMTVFGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV 750
            ++  +HPHGV   G+ +NG+ +       +  L    L+  P+   +   WAG   P+++  F    K+G + G++PGGF+EA+L    + RV++KNRKG IK  LQ GY++ P +TFGE DT+W       +RL++    +P V  WG WWCP +P     L+TV G PLALP    P+ EDVDK+H  YV+ L+ L  + KA+YAS P   L++
Sbjct:  105 SLLSFHPHGVLVCGWTVNGAAHTAWKDSAVRWLATDLLFVLPVIAQIM-YWAGG-GPANRSSFEMLAKEGTNIGLLPGGFEEASLFTYKKHRVFLKNRKGFIKLGLQYGYKVHPVYTFGEEDTFWTLPYFASLRLFLNQYKIPTVVFWGQWWCPFMPHPSAKLVTVVGPPLALPLTPSPTKEDVDKYHALYVDALQTLFDKFKAEYASTPDATLEI 318          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6755.14872.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Acyltransferase5.180e-19196.81n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL52_ECTSI[more]
Acyltransferase3.100e-8548.63n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C... [more]
Acyltransferase1.590e-8246.61n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7... [more]
Uncharacterized9.590e-5843.46protein n=1 Tax=Arcella intermedia TaxID=1963864 R... [more]
Acyltransferase4.710e-5342.29n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A... [more]
Hypothetical5.660e-5349.70protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Acyltransferase7.000e-5139.42n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0... [more]
Acyltransferase1.810e-5040.50n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A... [more]
Acyltransferase2.200e-4940.74n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID... [more]
Acyltransferase3.430e-4839.35n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GV... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig6755contigE_fasciculatus_S2_contig6755:2..4425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score540.0
Seed ortholog evalue5.7e-151
Seed eggNOG ortholog2880.D8LL52
Model size756
KEGG rclassRC00004,RC00037
KEGG koko:K14457
KEGG ReactionR03755,R03756
KEGG Pathwayko00561,ko04975,map00561,map04975
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.2-acylglycerol O-acyltransferase activity
EggNOG OGsKOG0831@1,KOG0831@2759
Ec32 ortholog descriptionmono-or diacylglycerol acyltransferase type 2
Ec32 orthologEc-25_000060.1
EC2.3.1.22
Cds size756
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig6755.14872.1prot_E_fasciculatus_S2_contig6755.14872.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig6755 2..4425 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842331.551043-CDS-E_fasciculatus_S2_contig6755:1..971696842331.551043-CDS-E_fasciculatus_S2_contig6755:1..97Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 2..97 +
1696842331.5658414-CDS-E_fasciculatus_S2_contig6755:428..5431696842331.5658414-CDS-E_fasciculatus_S2_contig6755:428..543Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 429..543 +
1696842331.576862-CDS-E_fasciculatus_S2_contig6755:1465..15661696842331.576862-CDS-E_fasciculatus_S2_contig6755:1465..1566Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 1466..1566 +
1696842331.5877433-CDS-E_fasciculatus_S2_contig6755:1859..19611696842331.5877433-CDS-E_fasciculatus_S2_contig6755:1859..1961Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 1860..1961 +
1696842331.6077394-CDS-E_fasciculatus_S2_contig6755:2704..27791696842331.6077394-CDS-E_fasciculatus_S2_contig6755:2704..2779Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 2705..2779 +
1696842331.6262922-CDS-E_fasciculatus_S2_contig6755:3342..34101696842331.6262922-CDS-E_fasciculatus_S2_contig6755:3342..3410Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 3343..3410 +
1696842331.663947-CDS-E_fasciculatus_S2_contig6755:3753..38771696842331.663947-CDS-E_fasciculatus_S2_contig6755:3753..3877Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 3754..3877 +
1696842331.6762607-CDS-E_fasciculatus_S2_contig6755:4350..44251696842331.6762607-CDS-E_fasciculatus_S2_contig6755:4350..4425Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig6755 4351..4425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig6755.14872.1

>prot_E_fasciculatus_S2_contig6755.14872.1 ID=prot_E_fasciculatus_S2_contig6755.14872.1|Name=mRNA_E_fasciculatus_S2_contig6755.14872.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=252bp
GWTEFRHAIPRWAQYWHKSCGRVYEEEGPESWDKMPPTVFCYHPHGVFTQ
GYIINGSMNQELPKILGLLATALYHAPLFRLVFGRWAGSCAPSSKEVFLD
QMKKGLSFGIIPGGFQEATLSKLGEDRVWMKNRKGLIKYALQSGYRLRPC
FTFGESDTYWNAQGMWKVRLWMAAKNLPGVCPWGTWWCPLLPRRVNLMTV
FGEPLALPKIEQPSPEDVDKWHGAYVEELKALHGRHKAKYASNPQLELQV
L*
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mRNA from alignment at E_fasciculatus_S2_contig6755:2..4425+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig6755.14872.1 ID=mRNA_E_fasciculatus_S2_contig6755.14872.1|Name=mRNA_E_fasciculatus_S2_contig6755.14872.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4424bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6755:2..4425+ (Ectocarpus fasciculatus EfasUO2)
GGCTGGACGGAGTTCCGGCACGCGATCCCCCGGTGGGCGCAGTACTGGCA CAAGTCCTGCGGCCGTGTGTACGAGGAGGAGGGGCCTGAGTCGTGGGTGA GGAAAGAGCAAAGAAAAGTTCGACCCTAAACATTGTTGTGTGGACTGCCT ACCCAAGGAGGAAAGCAACGCTAATACGAAAAAAGACCAGGGAGGGGGCA CGCAGACCCTATCCCCAACGTAACCGATTATATAACTTGTCCAGATATTT GTGCTTCCGTAGAAAAGACTGCGTAGACTAGGTAGTGCATTGAGTACAGC AGCAGTGAGAGGTGTGGGGCTGATCAAAGGGGTAAGGTCTCTGACAGGGG GGGGAGTGGAATCGAGTTTTCATTTTATTCGTGCATGGAAGGCCCCTTGA CCGTAGCCGTGACCGCGCCCTCTTCAGGACAAGATGCCCCCGACGGTGTT CTGCTACCACCCTCACGGAGTGTTCACCCAGGGCTACATCATCAACGGGA GCATGAATCAGGAGCTGCCTAAGATCCTCGGTCTTCTCGCCAGTGAGTGG ATTACATGTTTGCATCACACATTTGCATCACATGGTTGCATCACATGTTT GCATCACATGGTTGCATCACATGTTTGCATCACATGTTTGCATCACGTGT TTGCATCACGTGTTTGCATCACATATTTGCATCACATGTTTTCACGTGGT GCATGGCGGTGCTGTCTTGATATGTTGGCCTTCATTTCGGCTTTCTGCTG TCACATGTCTCCTACAAGTACCATTATCCTCTCGTTACAGTTGTGCCGGG ACGTTTCGTTCTCTCTCACCCAAGTGTTGGAGATGGACGCTGTGGAGGAC GTTTTATGTACGGGGTTCATGCCATGACGTTATTGTGTATATGTCGTAGA GAGATTTCAGCGAAATTCCTCACTCGGAATTGTATTGTAGAGTGCATCGA AGACATTCCGTCGTGGTTGTTATTCTGAGATTACTGCGTCAATTTCCTTT TTTTTTCCCGGGTACCCGGCGCGAGAGAAAATGACATGCTTGACGAGTGG GGATAAGGTGGACGTTTTTCTTTACTGTTGGCCAGGACAAGTTTATCACC CCCGCCACTGCCCTTTGCTTTGCCGCGCTACGAGCCTGAGCATGGCGTAA CTCTCACTAATGTTTGGGGCGTCCCTACCCCCTTTCACCACCCACTCTCC CTCTTTTTTGTAGAGAATAATGTATAGATGAAAACACAGAGAGGCAGCCC GTTCGAGATATAGTATAAACAGGTGTGCTGAAGTCGCTACAGTAGTGAGT GGAGGGAAACCGGCTGGAAACTAGGCTTATTTCGAATCTGTTTGTCGCAC TGATGGTTTATACCAGTGATATCAGCACCCGCTCATTCTCCCCCTTGCTT GTCGGCCTTGACGTCAACCCCTCACGAACGAACGGGTAACGTGCCGTTTT CGGATGTTCCGCAGCCGCCCTGTACCATGCCCCTCTCTTTCGGCTGGTGT TTGGGAGATGGGCGGGGTCCTGCGCCCCGTCATCCAAGGAGGTTTTCCTG GACCAGATGAAGAAGGTGCTTCTATTTTTGAAGTGTCACTACATTCTTGC ATTTGATTTTCGAACGAGAACGAACAACGTGCCTGACAATGTCAAAAGCT TCACGCAAGTTTTTTTTTTGTCGTTTTTAGCCAAACGCGAAGTGATCATG AAAGAAAGGACGCCTCGAACTTTAACTATTGACAAGGCTGCGAAAAGTTT AACATTGTGGGTTGGCGGACGGCGGCCATCCAGACCACGGTTTGTTAACG GTTTTTCCGGACCGGCTTGTCTTGCACGATTTTCGGTGTGTATTCTACGG TTTTCCAGGGCCTCTCATTCGGCATCATCCCGGGGGGGTTCCAAGAGGCC ACGCTGTCTAAGCTAGGAGAGGACCGCGTGTGGATGAAGAATCGCAAGGG TTTGATTAAGGTACGTGATGGCCGCGTTTCGTTTTGGGCTGATTTTTGGG ATTTTCTTGCGTCGCCGGGCAGTTCTGCTCCCGTGATTGGTGTACATCGT GACCAACGATGTGCAATGCCTCTGGCACCGTTTTCACTCACGAAACGCAT TACTCGCGTAGCACACGGCAGTTGCATGTCCGGTGGTCTCCTGCCAAGAT AACGCTGATCATTGCTGTGTCGGTTCCTCCGGCGGTGCACTAAGTAAGTC ACGTGCGAAGTTTATTGGTGTCGTACCCTTTGGCCATGGCCGTGCTCATG TCTGCAAGAGCTCAGAACTGCCCTTCAAGCCCAAACCGAGATGGCGGCGT CATCATACGGAGTATAGCACCCCCCCTAATCTTGCCCCTCGGTTATAGGC ATTTATCACTGAACTAGTGCCTTAGGCTCGGTTCCAATCCTGACGGAAGT GCAGGCTCGGCTTTGGGGGGAAGGGGTGATATGGTGGTGAACAATTTCTT GGCCAGGAAAGACCAGAGATATCCAGTTGAAAACGATATTGTAATGCGAT CACCCCCTCGCATACGTGATCGCACGTCTCCAAAACGCGCTGTAAGGCGA TCATCGGTAGCAGTACTACAGTAACCATGTCGCTTATGCTTGTGCCCTTT TCTTCGCCGATCCGTCGTTTACCGCACATGTTTGCACTTACATTGTACGT ATTCGGACGTTTCGTCGGCGTTGACCGTCCTTGGGGCAACAACCAAACAA CAGTACGCGCTCCAGTCTGGCTACCGGCTTCGACCTTGCTTCACGTTTGG AGAGTCTGACACCTACTGGAACGCCCAGGTTTGGACATGATGCCGTATTC ACGCGTTCGTGCCTATTCTTCACCCTAACCACGTGATGACGAGGGTCGAA ACGTCATAGTGTCTATACAAAAAATATCGTGGCAGTGCCAACGGTTCGAT ATCGCTGTCCTGGGGGTCGGTGTTGTTGGGGTGGAGGCGGACCGTCTTGA CGACGGCTGTTGACCGTCACAGCGACGCTGGCTTTGGTTGTAGGGTGTAT GATAGTCGGTGTGCTGTAGTCGCAGTTCCGACGGTGCAACCCAGCGCGTC GAAACACGCACTTTGCTCGAGACAACTCGGTAGGCTTCTTGTGATGGAAA GGGATTCCCACGTGAAATTGGCGTTTCCAGTGGGGCTCTTCTCTTCTCAT GCCTGGATACTAGGCACGGGTCATCAAAGCTAAATGAGGGTGCTTGAGGG CGAAGCAGTCGCTATTCCCCAGTACAAAGTCGGCCATCCTCCCATCTGTG TTAGATCGCATTCCGGACGCGATATGCATCAATGGACCGAATCCATCGAA CGTTGGAGGGCTAAATGTGTTCTCTCATTTTATTCACGCAGGGCATGTGG AAGGTGCGACTGTGGATGGCAGCCAAGAACCTTCCCGGCGTATGCCCGTG GGGGACGTGGTGAGAGGAGAAGGGGGGAGGGTCCGTGGTGCAATCGTGTT GCTCTTTTTTCTGCTCTTCGAAAGGATTGGTTTTGTGCTGTCGCTGTTCC TGTTCCAAGTGTCTCGTCGTCCTCTGTCGTCAGTTTGTTCCTTTCCGGCT GCAGTACTCAACCGAGGCGTTTGCAGGGCATGGTGTTCGTGTGGAGCTGG TCCAACCAACATTTATTCCTGTATAGGATAGAACAGACAGATACCCTGAT GACGTCACGAGAGGATGTATTCCCCATGGCTAACCGTCGACGGTTCCATC AACGATACCAGCGACGACGATGCTGTCGAATACGTGCCCGCGATTTCGAC AGGTGGTGCCCCCTGTTGCCCCGGCGAGTGAATTTGATGACGGTGTTCGG CGAGCCTCTCGCCTTGCCTAAGATCGAACAGCCATCCCCCGAGGACGTGG ACAAATGGCACGGTGCCTACGTCGAGGTTAGTGGTCTATGCGTGCATGTA GTCACCACTTCCCGTACCCAACACCACCGCGAACAAGGTTGGGGAAGTCT GACTTTGCGCAGGCGCGGGCGAAACCTCGTTGACTCTAGTGGTTTCCGAG TGAACACAAGTAGTCGGAGCTCCAGTGCTTGGCGCATCATCTTGTAACAC GGACCTTTTTTGCGTCGCACACGCCTAGTATGCCTCCGGCAGGACACAAG TTTTTCCTTCTTTCGGACACCCAGGACATGGTTCCTCTACATACGACTAT ATATGTCAGTCAGTCAGTCAGTCAGTCTGTTCCTTCCCACCGAAGAGGGG GCCCGCGGTACTCGCTTGCTATGTGCTGGACTAGATCCCTCACTTCCGAT CCTCCCGCTAACATGGTGTGCCCCGTCCTGCCTCCCCCTACTTGTTTTAC CCGGTCTGGATGACTGGGGTCGGGATGCTGCTGGTCGTCCTCGACGCAGG AGTTGAAAGCTCTGCACGGCCGCCACAAGGCAAAGTATGCCTCCAACCCA CAACTGGAGTTGCAGGTGTTGTAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6755:2..4425+

>mRNA_E_fasciculatus_S2_contig6755.14872.1 ID=mRNA_E_fasciculatus_S2_contig6755.14872.1|Name=mRNA_E_fasciculatus_S2_contig6755.14872.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=756bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6755:2..4425+ (Ectocarpus fasciculatus EfasUO2)
GGCTGGACGGAGTTCCGGCACGCGATCCCCCGGTGGGCGCAGTACTGGCA
CAAGTCCTGCGGCCGTGTGTACGAGGAGGAGGGGCCTGAGTCGTGGGACA
AGATGCCCCCGACGGTGTTCTGCTACCACCCTCACGGAGTGTTCACCCAG
GGCTACATCATCAACGGGAGCATGAATCAGGAGCTGCCTAAGATCCTCGG
TCTTCTCGCCACCGCCCTGTACCATGCCCCTCTCTTTCGGCTGGTGTTTG
GGAGATGGGCGGGGTCCTGCGCCCCGTCATCCAAGGAGGTTTTCCTGGAC
CAGATGAAGAAGGGCCTCTCATTCGGCATCATCCCGGGGGGGTTCCAAGA
GGCCACGCTGTCTAAGCTAGGAGAGGACCGCGTGTGGATGAAGAATCGCA
AGGGTTTGATTAAGTACGCGCTCCAGTCTGGCTACCGGCTTCGACCTTGC
TTCACGTTTGGAGAGTCTGACACCTACTGGAACGCCCAGGGCATGTGGAA
GGTGCGACTGTGGATGGCAGCCAAGAACCTTCCCGGCGTATGCCCGTGGG
GGACGTGGTGGTGCCCCCTGTTGCCCCGGCGAGTGAATTTGATGACGGTG
TTCGGCGAGCCTCTCGCCTTGCCTAAGATCGAACAGCCATCCCCCGAGGA
CGTGGACAAATGGCACGGTGCCTACGTCGAGGAGTTGAAAGCTCTGCACG
GCCGCCACAAGGCAAAGTATGCCTCCAACCCACAACTGGAGTTGCAGGTG
TTGTAG
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