mRNA_E_fasciculatus_S2_contig6753.14869.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM92_9PHAE) HSP 1 Score: 150 bits (378), Expect = 2.220e-40 Identity = 64/88 (72.73%), Postives = 74/88 (84.09%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFSCIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
MFV+CEYP+++ DG CD+GNNNEACGYDGGDCCECTCENE DE +RC+ FSCIDP+A CVNDDDVT+DM ENC IG+GWCD N
Sbjct: 415 MFVNCEYPVNVGDGWCDQGNNNEACGYDGGDCCECTCENERDEDYRCMEFSCIDPSAPCVNDDDVTIDMVENCGYVSGIGNGWCDRNN 502
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR2_9PHAE) HSP 1 Score: 134 bits (338), Expect = 7.820e-35 Identity = 62/94 (65.96%), Postives = 70/94 (74.47%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEH----DEKW--RCIIFSCIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
M +C+YPL + DG CD+GNNNEACGYDGGDCCECTCE E D+ W C FSCIDPNAACV+DDD+TVDMFENC IG+GWCD N
Sbjct: 451 MIENCDYPLSVGDGWCDKGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNN 544
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB04_9PHAE) HSP 1 Score: 133 bits (334), Expect = 1.130e-34 Identity = 62/94 (65.96%), Postives = 69/94 (73.40%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEH----DEKW--RCIIFSCIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
MF +C+Y L + DG CD GNNNEACGYDGGDCCECTCE E D+ W C FSCIDPNAACV+DDD+TVDMFENC IG+GWCD N
Sbjct: 89 MFENCDYALSVGDGWCDEGNNNEACGYDGGDCCECTCEYESPYDWDDDWDYHCREFSCIDPNAACVSDDDITVDMFENCGYVSGIGNGWCDRNN 182
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3F4_ECTSI) HSP 1 Score: 125 bits (313), Expect = 7.270e-32 Identity = 58/94 (61.70%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEH----DEKW--RCIIFSCIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
MF +CEYP+DI +G CD NN EACGYDGGDCCECTCE E D+ W C+ F+CIDP+A CV+DDD+TVDM ENC IG+GWCD N
Sbjct: 189 MFENCEYPVDIGNGWCDEANNIEACGYDGGDCCECTCEYESPYDWDDDWDYHCMEFACIDPSAPCVDDDDITVDMVENCGYVSGIGNGWCDRNN 282
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI87_ECTSI) HSP 1 Score: 125 bits (314), Expect = 9.640e-32 Identity = 52/83 (62.65%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFSCIDPNAACVNDDDVTVDMFENC--PKFIGDGW 243
M +CEYP + DG C++ NNNE C YDGGDCC CTC+N+ D+ W C F+CIDP AACVNDDD+TVDMF NC P IG+GW
Sbjct: 285 MIENCEYPWGVGDGYCNQQNNNELCAYDGGDCCSCTCQNDFDDDWACTTFACIDPEAACVNDDDITVDMFVNCEYPVDIGNGW 367
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S4_ECTSI) HSP 1 Score: 113 bits (283), Expect = 9.470e-29 Identity = 52/83 (62.65%), Postives = 61/83 (73.49%), Query Frame = 1
Query: 19 YPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFS-CIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
+P + DG CD+ NNNE CGYDGGDCCECTC N D+ + C S CIDP+A CV+DDDVTVDM ENC +G+GWCDEEN
Sbjct: 57 FPREFGDGWCDQENNNEICGYDGGDCCECTCVNAWDDDYSCAANSACIDPSAPCVDDDDVTVDMVENCGYVGSVGNGWCDEEN 139
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSR3_ECTSI) HSP 1 Score: 102 bits (253), Expect = 1.620e-24 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFSCIDPNAACVNDDDVTVDMFENCP-KFIGDGWCDEEN 258
MF C + DG C+ NNNE CGYDGGDCCECTC + ++ C F+CIDP A CV+DDDVT D ENC +++GDG+CD N
Sbjct: 55 MFEDC---FNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMMEYLGDGYCDTYN 138
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: LNR (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S3_ECTSI) HSP 1 Score: 102 bits (253), Expect = 2.550e-24 Identity = 44/63 (69.84%), Postives = 51/63 (80.95%), Query Frame = 1
Query: 76 GYDGGDCCECTCENEHDEKWRCIIFSCIDPNAACVNDDDVTVDMFENCPKF--IGDGWCDEEN 258
GYDGGDCCECTCE + D+ ++C+ FSCIDPNA CVNDDD+TVDMF+NC IGDGWCD N
Sbjct: 9 GYDGGDCCECTCEGD-DDDYKCMQFSCIDPNAPCVNDDDITVDMFDNCGYVSGIGDGWCDSNN 70
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4F9_ECTSI) HSP 1 Score: 102 bits (255), Expect = 8.660e-24 Identity = 49/90 (54.44%), Postives = 63/90 (70.00%), Query Frame = 1
Query: 13 CEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCII-------FSCIDPNAACVNDDDVTVDMFENCPKF-IGDGWCDEEN 258
C++ D+ DG CD+ NNNE CGYDGGDCCECTCE D+ W + F+CIDP+A CVNDDD+TVD+ E+C +GDG+CD +N
Sbjct: 104 CDF-WDLGDGWCDQVNNNELCGYDGGDCCECTCEVPTDDDWDNDLYVACGEGFACIDPSAPCVNDDDITVDVDESCDAVGMGDGYCDMDN 192
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK5_9PHAE) HSP 1 Score: 102 bits (253), Expect = 2.360e-23 Identity = 47/87 (54.02%), Postives = 58/87 (66.67%), Query Frame = 1
Query: 1 MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFSCIDPNAACVNDDDVTVDMFENCP-KFIGDGWCDEEN 258
MF C + DG C+ NNNE CGYDGGDCCECTC + ++ C F+CIDP A CV+DDDVT D ENC +++GDG+CD N
Sbjct: 204 MFEDC---FNFGDGFCNDYNNNEQCGYDGGDCCECTCVVDWSAEFGCTEFACIDPTAPCVDDDDVTADALENCMIEYLGDGYCDTYN 287 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6753.14869.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6753.14869.1 >prot_E_fasciculatus_S2_contig6753.14869.1 ID=prot_E_fasciculatus_S2_contig6753.14869.1|Name=mRNA_E_fasciculatus_S2_contig6753.14869.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=86bp MFVSCEYPLDIRDGRCDRGNNNEACGYDGGDCCECTCENEHDEKWRCIIFback to top mRNA from alignment at E_fasciculatus_S2_contig6753:1536..3007- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6753.14869.1 ID=mRNA_E_fasciculatus_S2_contig6753.14869.1|Name=mRNA_E_fasciculatus_S2_contig6753.14869.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1472bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6753:1536..3007- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6753:1536..3007- >mRNA_E_fasciculatus_S2_contig6753.14869.1 ID=mRNA_E_fasciculatus_S2_contig6753.14869.1|Name=mRNA_E_fasciculatus_S2_contig6753.14869.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=258bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6753:1536..3007- (Ectocarpus fasciculatus EfasUO2)back to top |