mRNA_E_fasciculatus_S2_contig675.14868.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150FWK8_GONPE) HSP 1 Score: 174 bits (440), Expect = 1.880e-48 Identity = 76/137 (55.47%), Postives = 93/137 (67.88%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
SRCFC SY H F + PVCK C C+ F F+PSRPEE+GEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA+ER+ AGRPVG ++ PLS P + +M F
Sbjct: 61 SRCFCNHSYAEHFFVSPKSPYPVCKGCSCRAFAFIPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPTHRRC-RCGCPAFISNFACLACDLKWEDHETVFETAQERLIAGRPVGDEFRPLSDDPTIRDMVF 196
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SDR5_9CHLO) HSP 1 Score: 171 bits (434), Expect = 2.980e-48 Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
++RCFC + H F + P+CK+C C+GF F+PSRPEEIGEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL+ P L +M F
Sbjct: 35 KARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAGRPVGEDFRPLADDPALRDMVF 171
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Hypothetical (protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9YVQ9_9CHLO) HSP 1 Score: 168 bits (426), Expect = 2.710e-46 Identity = 70/137 (51.09%), Postives = 92/137 (67.15%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFCG +++ H F P C +C C GF FVP RPEE+GEWWLPRR GF+ +WRAKCRCGH H+ H P+ + C SC C F S + C+VCD + E+H+T ET ER++AGRPVG + PL+ +L +M F
Sbjct: 62 ARCFCGHAFEEHQFLSSRAPAPRCCSCACGGFSFVPQRPEEVGEWWLPRRKGFNVHTWRAKCRCGHAHDVHEPLYKRCLSCGCSTFQSNFACLVCDGKWEEHETVFETTRERIAAGRPVGDAFKPLADDAELQKMVF 198
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EG44_VITBC) HSP 1 Score: 167 bits (422), Expect = 2.640e-45 Identity = 71/138 (51.45%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTL-PVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRR-SCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
S+CFCG H F+ L P C CEC+ + FVP+RPEE+GEWWLPRRPGFD +WRAKC+C HTHEEH P R C C C F SA+ C+ CD EDH+T E+ ER +AGRPV D++P ++ P+ E +
Sbjct: 67 SKCFCGHPLSSHEFKNSRALWPHCTMCECKAYAFVPTRPEEVGEWWLPRRPGFDVRTWRAKCKCKHTHEEHMPNRPYRCRKCPCSTFTSAFLCIACDKHWEDHETVFESEAERRAAGRPVNEDFVPFAEMPEFYEAVY 204
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835SEC1_9CHLO) HSP 1 Score: 171 bits (434), Expect = 5.650e-45 Identity = 75/138 (54.35%), Postives = 94/138 (68.12%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
++RCFC + H F + P+CK+C C+GF F+PSRPEEIGEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL+ P L +M F
Sbjct: 35 KARCFCDHPFADHFFVSPKSPYPICKSCNCRGFAFIPSRPEEIGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPHTRRC-RCGCPAFTSNFACLACDLKWEDHETVFETARERLVAGRPVGEDFRPLADDPALRDMVF 171
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0V496_9CHLO) HSP 1 Score: 163 bits (412), Expect = 2.520e-44 Identity = 66/137 (48.18%), Postives = 85/137 (62.04%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFR-RGHTLPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
SRCFC ++ H F + P C C C+ F F+P RPEE+GEWWLPRR GFD +WRAKCRCGH H++H PV R C C CG+F S + C+ CD E H+T E+ ER +A +P+G Y P S P + + F
Sbjct: 61 SRCFCYHNFSQHNFASKKSVFPHCTLCRCKAFSFIPQRPEEVGEWWLPRRKGFDVRTWRAKCRCGHGHDDHDPVARHCSVCGCGQFNSVFACLSCDMNWEHHETVFESEMERAAASKPIGNAYRPFSDDPSMRSLVF 197
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2NZ14_9DINO) HSP 1 Score: 159 bits (403), Expect = 1.370e-43 Identity = 69/139 (49.64%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTL--PVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTFG 540
SRCFCG Y HV+ +G P C C+C GF ++P RPEE+GEWWLPRR GFD WRAKCRCGH H++H P R +C C C + SA+ C C R EDH+ ET ER +AG VG ++PL+ +P + FG
Sbjct: 35 SRCFCGHDYSEHVWDKGRRRLRPACGCCDCDGFRYMPRRPEEVGEWWLPRRRGFDVRVWRAKCRCGHGHDDHDPNRLACRLCGCTAYSSAWLCTCCGGRWEDHEALWETEGERRAAGLAVGSAFVPLASTPSIQAAAFG 173
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GRF0_9ALVE) HSP 1 Score: 164 bits (415), Expect = 1.020e-42 Identity = 74/142 (52.11%), Postives = 90/142 (63.38%), Query Frame = 1
Query: 127 RSRCFCGCSYKMHVF-RRGHTLPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVR----RSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+S+CFCG YK H F R P C TC C+ F+F+P+RPEE GEWWLPRRPGF S WRAKC+CGHTHE+H R R C KC + SA+ CV CD E H+T ET +ER G PVG D+IPL + P+ + F
Sbjct: 97 KSKCFCGHFYKDHQFANRRAPWPKCCTCACEAFEFIPTRPEEAGEWWLPRRPGFKVSEWRAKCKCGHTHEDHDTKRPHRCRLCPPFKCSSYTSAWLCVACDRHWEQHETVFETEQERRDQGLPVGEDFIPLKELPEFYDAVF 238
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YE58_9CHLO) HSP 1 Score: 164 bits (414), Expect = 1.290e-42 Identity = 74/138 (53.62%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHTLPV--CKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFCG S+ H F P CKTC C+ F +VP RPEE+GEWWLPRR GF+ +WRAKCRCGH H+EH P R C C C F S + C+ CD + EDH+T ETA ER+ AGRPVG D+ PL P + E+ F
Sbjct: 38 ARCFCGHSFGDHQFLNWPKTPYPSCKTCACRAFQYVPKRPEEVGEWWLPRRKGFNVHTWRAKCRCGHGHDEHDPNARRC-RCGCPVFQSNFACLACDLKWEDHETVFETARERLVAGRPVGDDFRPL-MDPSMRELVF 173
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Match: Uncharacterized (protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TSI8_VOLCA) HSP 1 Score: 155 bits (393), Expect = 1.610e-42 Identity = 70/137 (51.09%), Postives = 86/137 (62.77%), Query Frame = 1
Query: 130 SRCFCGCSYKMHVFRRGHT-LPVCKTCECQGFDFVPSRPEEIGEWWLPRRPGFDASSWRAKCRCGHTHEEHHPVRRSCGSCKCGEFYSAYGCVVCDARQEDHQTQVETAEERVSAGRPVGRDYIPLSQSPQLSEMTF 537
+RCFC SY H F P+CK C C+ F FVPSRPEE+GEWWLPRR GF+ +WRAKCRCGH EH P C F S + C+VCD + EDH+T E+A ER+ AGRPVG D+ PL+ + E+ F
Sbjct: 24 ARCFCNHSYADHFFVSPKAPYPICKACSCRAFAFVPSRPEEVGEWWLPRRKGFNVHTWRAKCRCGHXXXEHDP-NAXXXXXXCSMFQSNFACLVCDLKWEDHETVFESATERLMAGRPVGEDFRPLADDSAIRELVF 159 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig675.14868.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig675.14868.1 >prot_E_fasciculatus_S2_contig675.14868.1 ID=prot_E_fasciculatus_S2_contig675.14868.1|Name=mRNA_E_fasciculatus_S2_contig675.14868.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=393bp MRLLPWEEMPRRARRATFQRFCHTASPQERKRSCGKKKRPRRRSRCFCGCback to top mRNA from alignment at E_fasciculatus_S2_contig675:13325..17122- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig675.14868.1 ID=mRNA_E_fasciculatus_S2_contig675.14868.1|Name=mRNA_E_fasciculatus_S2_contig675.14868.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3798bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig675:13325..17122- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig675:13325..17122- >mRNA_E_fasciculatus_S2_contig675.14868.1 ID=mRNA_E_fasciculatus_S2_contig675.14868.1|Name=mRNA_E_fasciculatus_S2_contig675.14868.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1179bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig675:13325..17122- (Ectocarpus fasciculatus EfasUO2)back to top |