mRNA_E_fasciculatus_S2_contig675.14867.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC39_ECTSI) HSP 1 Score: 365 bits (938), Expect = 2.390e-118 Identity = 241/283 (85.16%), Postives = 251/283 (88.69%), Query Frame = 1
Query: 130 MRAKSAEVAAAASDTNAGTKSGPLFTLPCRARPPPVAAPADPPEEGVGEVVRHSGEDTVAVRGHLETGTPGQSAGQHPWGGLDRGHPAAFPQGGFAGAGXXXXXXXXXXXXXXXGTSATEYAVYGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKATRRKGRDMERALARGDLGALGSETPVMDLQQGSNEYNPLRTKPTTAAMSQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
M AKSA AAAAS+T G+KSGPLFTLP RARPPP AAPADPPEEG+GE+VR SGEDT AV HLETGTPG SAGQ WGG DRGH AAFPQG +AGAG XXXXXXXXXXXXX GTSAT+YA+YGAASXXXXXXXXXXXXXXXXXXXXXXX AKATRRKGRDMERALARG+LGALGSE PVMDL+QGSNEYNPLRTKPTTAAM+QEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW
Sbjct: 1 MHAKSAAAAAAASET--GSKSGPLFTLPSRARPPPAAAPADPPEEGMGELVRPSGEDTAAVPRHLETGTPGPSAGQQQWGGFDRGHAAAFPQGSYAGAGGXXXXXXXXXXXXXAGTSATDYAIYGAASXXXXXXXXXXXXXXXXXXXXXXXSCQPEFGGGG--AKATRRKGRDMERALARGNLGALGSEMPVMDLEQGSNEYNPLRTKPTTAAMNQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 279
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA78_9PHAE) HSP 1 Score: 346 bits (888), Expect = 6.150e-108 Identity = 238/266 (89.47%), Postives = 247/266 (92.86%), Query Frame = 1
Query: 181 GTKSGPLFTLPCRARPPPVAAPADPPEEGVGEVVRHSGEDTVAVRGHLETGTPGQSAGQHPWGGLDRGHPAAFPQGGFAGAGXXXXXXXXXXXXXXXGTSATEYAVYGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKATRRKGRDMERALARGDLGALGSETPVMDLQQGSNEYNPLRTKPTTAAMSQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
G++SGPLFTLP RARPPP AAPADPPE+G+ EVVR SGE T AV G+LETGTPG SAGQ WGG DRGH AA PQGG+AGA XXXXXXXXXXXXXXXGTSAT+YAVYGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AKATRRKGRDMERALARGDLGALGSE PVMDLQQG+NEYNPLRTKPTTAAM+QEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW
Sbjct: 224 GSRSGPLFTLPSRARPPPAAAPADPPEQGMEEVVRPSGEGTAAVPGYLETGTPGLSAGQQQWGGFDRGHAAASPQGGYAGAXXXXXXXXXXXXXXXXGTSATDYAVYGAASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---AKATRRKGRDMERALARGDLGALGSEMPVMDLQQGTNEYNPLRTKPTTAAMNQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 486
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVM7_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 2.080e-15 Identity = 50/119 (42.02%), Postives = 71/119 (59.66%), Query Frame = 1
Query: 622 KATRRKGRDMERALARGDLGALGSETPVMDLQQGSNEYNPLRTKPTTAAMSQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
KA R + +D+ER +A G+ + +T V+ Q ++ +NP R A + H+ Y+ S+G+T TL+P Q+RKHQIN LA +AA E +LME+ G S TKAQT AKYGW
Sbjct: 4 KARRARDKDIERQIAMGNFDVIAGQTAVV-YQPDTSSWNPHRNGVQEQAR---EVHVGGLSYNASSGETDMTLKPNKTQRRKHQINSLAFEAAERELELMEKKGNSMKTKAQTQAKYGW 118
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q5_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 9.460e-14 Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 1
Query: 661 LARGDLGALGSET-PVMDLQ-QGSNEYNPL-RTKPTTAAMSQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
LA G + AL S V+D Q + N +N + +T A ++ +K I Y+P+TG+T + + QKRKHQIN LA QAA+ E D+ME+ GA LTKAQTHAKYGW
Sbjct: 2 LASGAVEALESAAVAVVDYQARDPNAFNQFAQGAVSTVAGAESEKEIRGQRYNPATGQTETIVGASKGQKRKHQINSLAVQAAARELDIMEKRGAGFLTKAQTHAKYGW 110
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QUF6_HETAK) HSP 1 Score: 80.1 bits (196), Expect = 1.760e-13 Identity = 44/82 (53.66%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 733 YNPLRTKPTTAAMSQEQKHIESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
YNPLR P+ A S + I++ Y+PSTG+ T +P+ +QKRKHQINQLA AA E +L++R G LTKAQT AKYGW
Sbjct: 118 YNPLRQGPSNQAQSVK---IKAGFYNPSTGQVEATDKPSKLQKRKHQINQLAFNAAERELELLDRRGQGMLTKAQTQAKYGW 196
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K8A3_9EUKA) HSP 1 Score: 57.8 bits (138), Expect = 3.860e-5 Identity = 30/63 (47.62%), Postives = 43/63 (68.25%), Query Frame = 1
Query: 790 IESSVYDPSTGKTVKTLEPTSMQKRKHQINQLAAQAASMERDLMERSGASRLTKAQTHAKYGW 978
I ++ + ++G V+ +P+S+QKRKHQIN LAAQAA+ D+ RS S +K +T AKYGW
Sbjct: 295 IAANFWSRTSGDVVQQYQPSSLQKRKHQINSLAAQAAAQASDVALRSSKSMKSKKETAAKYGW 357 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig675.14867.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig675.14867.1 >prot_E_fasciculatus_S2_contig675.14867.1 ID=prot_E_fasciculatus_S2_contig675.14867.1|Name=mRNA_E_fasciculatus_S2_contig675.14867.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=284bp MRAKSAEVAAAASDTNAGTKSGPLFTLPCRARPPPVAAPADPPEEGVGEVback to top mRNA from alignment at E_fasciculatus_S2_contig675:9300..13283+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig675.14867.1 ID=mRNA_E_fasciculatus_S2_contig675.14867.1|Name=mRNA_E_fasciculatus_S2_contig675.14867.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3984bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig675:9300..13283+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig675:9300..13283+ >mRNA_E_fasciculatus_S2_contig675.14867.1 ID=mRNA_E_fasciculatus_S2_contig675.14867.1|Name=mRNA_E_fasciculatus_S2_contig675.14867.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=852bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig675:9300..13283+ (Ectocarpus fasciculatus EfasUO2)back to top |