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Homology
BLAST of mRNA_E_fasciculatus_S2_contig6747.14866.1 vs.
Match: Similar (to ubiquitin specific protease 48 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKX6_ECTSI) HSP 1 Score: 588 bits (1515), Expect = 1.930e-182 Identity = 606/1116 (54.30%), Postives = 642/1116 (57.53%), Query Frame = 1
Query: 1 PRGDEPSAGGGERGKGVSLTKGEKGGSDGDGDEECVYELRCVLYHKGSNVHSGHIVAEADDADGGEKKQVKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGKRSKVXXXXXXXDVMLDDGRKRGPDDSCLHESLRGKGGA-PSQPRGNMQWCPNCLGDNRLPGKRSMGNDSKRCPGCSLHTHAGCRRKRPGASPGAAGA-----AADGSWACDECKRREDGVVVAGGDDRVWLRLRAARLDGGYKVSSPSPLQPPSTAAPXXXXXXXXXXXXXXXXXXXXXXXRVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDGDGDRKANSGDDXXXXGSFSAHFPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETAVVEVKADGVVAEDEXXXXXXXXXXXXXXXXXXXXXXXGPGGAKKPRGSEDAYMLIYVKRGVAWGPSSAERDAKKLPEDVLAAVQASNKTLRDNVTKYGIDKSLLEGDMHDRRELYASIFGPPLKPPPPAGRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSCTAGEGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRKMPESEFFWVQTEWLRQWIVGQRADQ-ASEG--AGGGGSEMMEVEETAKAAGESEASDDAGAAEAGDGPEPDGAAAAAHSSGDPKEEAIRGPVPREDEG-------APEEESNPGAEESLACVRDAAGGVEGDAPTV------------LSLTEGVEEGRRGIFEDRMSNVPLLCPHGGLHPGSLSKFKLVTRAAYEGILSTTSMPPPDCHLSAENYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSWLPQQ 3264
PRGD GGGERGKGVS G+ GS+GD DEE VYELRCVLYHKGSNVHSGHIVAEADD+DGG +KQV+DQ XXXXXXXXXXXXX GKRSKV XXXXXDVMLD+G++ GPDD+ LHESLRGKGGA PSQPRGN WCPNCLGDNRLPG+++MG+DSKRCPGC LHTHA CRRKRP ASPGAAGA AADGSWACDECKRREDGVVVAGGDD VWLRL+AARLDGG+KVSS SPLQP ST XXXXXXXX RVVM XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX A+D D D KANSGD +FSAH +S XXXXXX XXXXXXXXXXXXXXXXXXXXX EET VVE K GVVAED XXX G GAKKPRGSEDAYMLIYVKRGVAWGPSSAERDA+KLPEDVLAAVQASN+TL NV +Y +K +L+GDM DRRELYA IFGPPLKP PPAGRKG XXXXXXXXXXXXXXXXXX ADSCTA EG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX LP +PESEFFWV+ EWLRQWIVGQRAD ASEG AG E EA +AGDGPEPD AP E NPG++ES C A GVEGD + LTE VEE +F +R++NVPLLCPHGGLHP S+SKFKLVTRAAYEGILST MP PD HLSA NYYCSLCVKDHIGQKESNVNVSRESG+LLAELEKPEPSW P Q
Sbjct: 389 PRGDGSKVGGGERGKGVSPKGGK--GSNGDDDEEYVYELRCVLYHKGSNVHSGHIVAEADDSDGG-RKQVEDQDQAXXXXXXXXXXXXXNPAQAKQSTASKGKRKAHARGSAVAGRQR------------------GKRSKVVEXXXXXDVMLDNGQEHGPDDTHLHESLRGKGGAAPSQPRGNQPWCPNCLGDNRLPGEKTMGSDSKRCPGCGLHTHARCRRKRPEASPGAAGATGGXXAADGSWACDECKRREDGVVVAGGDDPVWLRLKAARLDGGFKVSSLSPLQPSSTXX------------XXXXXXXXGSPSRVVMQAISSLGSATVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGDA-------AQDRDSDHKANSGDKDDQ--TFSAHLARSSRRTNGGGEGAGSKEGHSQTEAASTPALTAXXXXXXVRRRRGDAEXXXXXXXXXXXXXXXXXXXXXEKFCGTPYDAIVPAGGTTRGSRQGPRLGSGGAGGGDDAKAEWQENGAQQAPDASAHVRGGGGAREDGAAVSADADDER-EETEVVESKVGGVVAED---GDGCGGGRXXXDDGSVGSGKGGQAGAKKPRGSEDAYMLIYVKRGVAWGPSSAERDAEKLPEDVLAAVQASNETLLANVDRYDCEKLVLDGDMQDRRELYARIFGPPLKPAPPAGRKGKGKGPAQAIVIDQENNAGVGXXXXXXXXXXXXXXXXXXADDGKGHEEPGDGPAAKRARRRSR----------ADSCTADEGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELDFAQAVAASLAQSPTAAXXXXXXXXXXGQEELPGNIPESEFFWVEAEWLRQWIVGQRADHNASEGGEAGXXXXXXXXXXXXXXXXXEGEAXXXXXXXDAGDGPEPDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPXXEGNPGSDESSVCFSHDADGVEGDVAGTTCRIATDDNKEQVLLTEEVEEETPCVFTERLTNVPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPRPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGQLLAELEKPEPSWPPPQ 1448
BLAST of mRNA_E_fasciculatus_S2_contig6747.14866.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6A7_9PHAE) HSP 1 Score: 400 bits (1028), Expect = 8.010e-117 Identity = 564/976 (57.79%), Postives = 597/976 (61.17%), Query Frame = 1
Query: 604 MGNDSKRCPGCSLHTHAGCRRKRPGASPGAAGAAAD-------GSWACDECKRREDGVVVAGGDDRVWLRLRAARLDGGYKVSSPSPLQPPSTAAPXXXXXXXXXXXXXXXXXXXXXXXRVVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDGDGDRKANSGDDXXXXGSFSAHFPQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEETAVVEVKADGVVAEDEXXXXXXXXXXXXXXXXXXXXXXXGPGGAKKPRGSEDAYMLIYVKRGVAWGPSSAERDAKKLPEDVLAAVQASNKTLRDNVTKYGIDKSLLEGDMHDRRELYASIFGPPLKPPPPAGRKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----------DSCTAGEGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLPRKMPESEFFWVQTEWLRQWIVGQRADQASEGAGGGGS---------------------------------------------EMMEVEETAKAAGESEASDDAGAAEAGDGPEP---DGAAAAAHSS-GDPKEEAIRGPVPR----EDEGAPEEESNPGAEESLACVRDAAGGVEGDAPTV---------------------LSLTEGVEEGRRGIFEDRMSNVPLLCPHGGLHPGSLSKFKLVTRAAYEGILSTTSMPPPDCHLSAENYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSWLP 3258
MG+DSKRCPGC LHT GSWACDECKRREDGV VA DD VWLRL+AARLDGG+KVSSPSPLQP STAA XXXXXXXXXXXXXXXXXXXXX V+ XXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX A+DGDGDRKANSG++ +FSAHF +S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX EET V+E K GV ED XXXXXXXXXXXXX G KKPRGSEDAYMLIYVKRGVAWGPSSAERDA+KLPEDVLAAV+ASN+ L NV +Y +K LL+ M DRRELYA IFGPPLKP PPAGRKG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX D + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXX P +PES+FFWV+TEWLRQWIVGQ ADQ E A EMMEVEET KAAGE EASD AGAA+AGD PE DGAA AAHSS GDP+EEA GPVPR E+EGAPE+E NPG++E+ C+ A GVEGD + LTE VEE +F R+SN+PLLCPHGGLHP S+SKFKLVTRAAYEGILST MP PD HLSA NYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSW P
Sbjct: 1 MGSDSKRCPGCGLHTXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSWACDECKRREDGVAVASADDPVWLRLKAARLDGGFKVSSPSPLQPYSTAAAXXXXXXXXXXXXXXXXXXXXXSCVVMQAFSSLGSATAPXXXXXXXXXXXXXPXXXXXXXXXXXXXXXXXXXXXXXTTAGDA-------AQDGDGDRKANSGNEDDE--AFSAHFARSSRKTNGGGEGTGSKGGHSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKLCETPDDVIALAGGTTRGSRQGPRQGSGGAGGGDDAKAERLENGAGQAPDASALVSGGGGAREDDAGVSADADDER-------EETEVIESKVTGVTVEDGDQCGGGRGXXXXXXXXXXXXXQAG---LKKPRGSEDAYMLIYVKRGVAWGPSSAERDAEKLPEDVLAAVKASNEALLANVDRYDREKLLLDRHMQDRRELYARIFGPPLKPAPPAGRKGKGKGPAQAIVINEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVGVVPYVHPSPSDEELEESDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDYAQAVXXXXXXXXXXXXXXXXXXXXXXXXXPPGNIPESKFFWVETEWLRQWIVGQHADQDGESAXXXXXXXXXXXXXXXXXXXXXXXXXXPLVLDGVXXXXXXXXXXXXXXXXXEMMEVEETTKAAGEGEASDGAGAADAGDEPEARECDGAAVAAHSSRGDPEEEATGGPVPRGEEEEEEGAPEQEGNPGSDENSGCLGHDADGVEGDVARTTCPVATCDNNGNLEVYSQGEEVLLTEEVEEETPCVFTKRLSNLPLLCPHGGLHPASVSKFKLVTRAAYEGILSTVCMPLPDYHLSASNYYCSLCVKDHIGQKESNVNVSRESGELLAELEKPEPSWPP 957
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 0 |
| Start | 0 |
| Seed ortholog score | 592.8 |
| Seed ortholog evalue | 3.4e-166 |
| Seed eggNOG ortholog | 2880.D8LKX6 |
| Preferred name | USP48 |
| Model size | 3406 |
| KEGG ko | ko:K02911,ko:K06255,ko:K11858 |
| KEGG Pathway | ko03010,ko04512,ko05161,ko05205,map03010,map04512,map05161,map05205 |
| KEGG Module | M00178 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0005886,GO:0007275,GO:0008150,GO:0009791,GO:0010154,GO:0016020,GO:0022414,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044464,GO:0045121,GO:0045202,GO:0045211,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0070013,GO:0071944,GO:0097060,GO:0098589,GO:0098590,GO:0098794,GO:0098805,GO:0098857 |
| Exons | 9 |
| EggNOG free text desc. | ubiquitinyl hydrolase activity |
| EggNOG OGs | COG5077@1,KOG1863@2759 |
| EC | 3.4.19.12 |
| Cds size | 3405 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01610,ko00000,ko00001,ko00002,ko00535,ko01000,ko01002,ko03011,ko03029,ko04121,ko04147,ko04516 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1696842331.0780208-CDS-E_fasciculatus_S2_contig6747:33..207 | 1696842331.0780208-CDS-E_fasciculatus_S2_contig6747:33..207 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 34..207 + |
| 1696842331.0986412-CDS-E_fasciculatus_S2_contig6747:1442..1742 | 1696842331.0986412-CDS-E_fasciculatus_S2_contig6747:1442..1742 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 1443..1742 + |
| 1696842331.1123579-CDS-E_fasciculatus_S2_contig6747:2711..3425 | 1696842331.1123579-CDS-E_fasciculatus_S2_contig6747:2711..3425 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 2712..3425 + |
| 1696842331.1254847-CDS-E_fasciculatus_S2_contig6747:4042..4762 | 1696842331.1254847-CDS-E_fasciculatus_S2_contig6747:4042..4762 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 4043..4762 + |
| 1696842331.137281-CDS-E_fasciculatus_S2_contig6747:4997..5154 | 1696842331.137281-CDS-E_fasciculatus_S2_contig6747:4997..5154 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 4998..5154 + |
| 1696842331.148259-CDS-E_fasciculatus_S2_contig6747:5454..5742 | 1696842331.148259-CDS-E_fasciculatus_S2_contig6747:5454..5742 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 5455..5742 + |
| 1696842331.1592538-CDS-E_fasciculatus_S2_contig6747:6811..7093 | 1696842331.1592538-CDS-E_fasciculatus_S2_contig6747:6811..7093 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 6812..7093 + |
| 1696842331.1700406-CDS-E_fasciculatus_S2_contig6747:7201..7745 | 1696842331.1700406-CDS-E_fasciculatus_S2_contig6747:7201..7745 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 7202..7745 + |
| 1696842331.1828954-CDS-E_fasciculatus_S2_contig6747:8024..8250 | 1696842331.1828954-CDS-E_fasciculatus_S2_contig6747:8024..8250 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig6747 8025..8250 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6747.14866.1 >prot_E_fasciculatus_S2_contig6747.14866.1 ID=prot_E_fasciculatus_S2_contig6747.14866.1|Name=mRNA_E_fasciculatus_S2_contig6747.14866.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=1135bp
PRGDEPSAGGGERGKGVSLTKGEKGGSDGDGDEECVYELRCVLYHKGSNV HSGHIVAEADDADGGEKKQVKDQDQDQREESDSDGGAKNPAQAKKSTTNT NKAAGSGTGAGAAATANNKGKRKAQARGSATAGRQRGKRSKVVEEEEDED VMLDDGRKRGPDDSCLHESLRGKGGAPSQPRGNMQWCPNCLGDNRLPGKR SMGNDSKRCPGCSLHTHAGCRRKRPGASPGAAGAAADGSWACDECKRRED GVVVAGGDDRVWLRLRAARLDGGYKVSSPSPLQPPSTAAPTAAPAAAPAA AAATAATARGSPSRVVMQAFSSLGSAAAAAAAAFRPASRPSPSPALPEAA GDPATSPTSSSSSSSPAAAPAATATRDAAEDGDGDRKANSGDDEDDDGSF SAHFPQSSRRTDDGGGGGAGSKGGHAPSTAVSAPVPVRRRRGEAAARTAA AASARFARAKMEEQEEKICGTPDDDDDDDDVMIPAGGTTRGSRQGVARRG SGGAGGGDDAKAERQENGAEQAPESPVHGSGGGGGGAREDDAGGSTDADD EREETAVVEVKADGVVAEDEDDGDGCGGGKGGGDGASSGSGKGGPGGAKK PRGSEDAYMLIYVKRGVAWGPSSAERDAKKLPEDVLAAVQASNKTLRDNV TKYGIDKSLLEGDMHDRRELYASIFGPPLKPPPPAGRKGKGKGPAQAIVI DEENNAGVGEEEEEEEEEEEEEEGEEEEEEEEDKVGDGKDKGQEEQGEGP AAAKRARRRSRADSCTAGEGATAAAAGGDDEDVGGVDEDARQAAAASAVA AAAAEADESTTQEELDYAQAVAASLAQSSTAAAAAPAADSEDEEQEEELL PRKMPESEFFWVQTEWLRQWIVGQRADQASEGAGGGGSEMMEVEETAKAA GESEASDDAGAAEAGDGPEPDGAAAAAHSSGDPKEEAIRGPVPREDEGAP EEESNPGAEESLACVRDAAGGVEGDAPTVLSLTEGVEEGRRGIFEDRMSN VPLLCPHGGLHPGSLSKFKLVTRAAYEGILSTTSMPPPDCHLSAENYYCS LCVKDHIGQKESNVNVSRESGELLAELEKPEPSWLPQQQQQQQQHEGTRA ARGRGGGGGGGGGAPPSPVGDITQGGSGLESLPGS back to topmRNA from alignment at E_fasciculatus_S2_contig6747:34..8251+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig6747.14866.1 ID=mRNA_E_fasciculatus_S2_contig6747.14866.1|Name=mRNA_E_fasciculatus_S2_contig6747.14866.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8218bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6747:34..8251+ (Ectocarpus fasciculatus EfasUO2) CCACGAGGTGACGAGCCTAGCGCAGGGGGGGGAGAAAGAGGAAAAGGCGT
GTCTCTTACTAAGGGGGAGAAGGGGGGCAGTGATGGCGATGGCGATGAGG
AGTGCGTGTATGAGCTGCGATGCGTGCTGTACCACAAGGGGAGCAACGTC
CACTCCGGGCACATCGTGGCTGAGGTGAGCGAACGCCTCTCCTTGTTGTC
ATTCGTTGTTGTATGCGGTTGCAATTTGGAAGTGTGGTTGCTATGAGTGG
CTGGCAGCAACAATATGGAGATGCTGCGTGTGGTTAGAATACTGAGGTGT
TTGTCGTATTGTGGGTGGTTGCACCATGTAGGTTTCGTTGCTTGCTTTGG
TGCCGTCTGACTGATGGTGCGAGTCTTGGTGTCCCGTTGTTACCTCTTTA
TTTCGTTCTTCTAATGTTTGTGCTGTTCTGTTCTGCTCTTCCTTTGTTTT
CATGCTACACTGGCGCCAGGGAAGAAGACGATCACTCGTCGCCGGCGAGG
CCAACGTTCTTCCCCTTCTTTTTCATTTCATTCGCGTTATTTTTCTCGGT
TCTTTCAAATTTTGTGTCAGGTGCATGATTCTGAATCGGACGTGTGGACT
CTATTCGACGACGAAAAAGTCCGACACATTCCGGGGGCGAACGCCCATGG
ACCCGTAAACGGAGGCGCTAGTGGTGGCGGTACAGCCAGCAAGGGCAAGG
GGGCACGCGGAAAGGGAAACGGTGGCCGCGGGGCGCTGAAGAAGGTTGCA
GCAGCAGCTGCTGCTGCTGCTGCCGCTGCTGCGGGCAAAGGTTCTAGTGG
CGATGATGCAGCTGCCGCGGAGTCAGAGGCAGACGCGGAGTTCTTGCGAG
AGGTGGGTGAGGCACATGTGCAAGTAGGGGGAGGGGAAAAGCGGACATTG
TTGTTGGCGGTGTCGGATGAGATGATGAGATCGATCCAAGCAGCGAGTGA
CCTCGGCATGAGGTTAAGTGGAATTGCGGCGACCATTGTCTGTTGTTGGT
TCACCCGCGAGCGTCTGCAAGCTATGTACGAAACGTGGTGCCTGGTTTTG
ATGCTTTCCGTTGCAAGCAGGGGGACATACTACTGTACCCTGGTGGTGGC
CCTAGTGTACGTGTGGATGGCCGCTTAGGGACCTCATGCGTTCCCATATC
CTTGGGATCCCATTTCTGTCTTAACACATAAGACAGAAGCAAAGGAAAAA
CAGCGAAAATTTTGTCTAATAGTTCGGGTTCATTTTTTAGTACCTCTTTC
TGGGTAAGTTAGTTAGCCTGTGACGTCACCACGGGAATCAATCGACCGCG
TCAAGTGTTGGATCAGTACGGACAGAAGAAGGTACTGGGTAGAGAGGTCG
GAACGATTTTTAATGTGAAGCCAACCACAACGACGGACGCGTGGTGTTGC
ACAACTCAGGCTGACGATGCCGACGGTGGTGAGAAAAAACAAGTTAAAGA
TCAAGACCAAGACCAACGCGAGGAAAGCGACAGCGATGGAGGTGCCAAGA
ACCCTGCCCAGGCAAAGAAGTCCACCACCAACACCAACAAGGCGGCTGGT
AGTGGTACTGGTGCTGGTGCTGCCGCCACAGCCAACAACAAGGGCAAACG
CAAGGCCCAGGCGAGAGGGAGCGCGACGGCCGGGAGACAGCGCGGCAAGC
GAAGCAAGGTGGTAGAAGAGGAGGAAGACGAGGACGTGATGCTGGACGAC
GGGCGAAAGGTATCATCTACCATCTACGTAGTGCGTGTTTCGGATACAGC
TGTAAAATAGTATAGTATAGTATAGTATAGTGTAGTAATAGTCCAACTTG
TTCTTGCCGTGAGTCTTGGTCCTCAGAGCTGCAGGAGGAGGTCTTGCAAG
TTCCCTGCTGCTGTAGATTTGCATATTGTACTGCTGTTGTTTTTGCTTTG
GCAGGAGGCACGACACGGCATGGAATGGCATGCGTCGTCCTTCGTACCGT
GCCCGGCCTCAATCCCGGCTCCCGTCGCGGTTCTTCCCTTCCACCCTGCA
CGGCAGCCGCCCCCGCTTAGTCCCCAAGAGACTGAAGAGGGCGCAGTCAA
ACGTTTGGTTAACACGCTACACGCGAAACATTGCACTTGAGTCAGGAGCA
CTACTGTCAGGGATGGAGGTGGCTCGTGTTGACCTGTTTGTCACAGCCGG
TGGTTGAATTCGCCTTTGAGACGCAAAAGAGCGCGGTCTAATCTAAACCC
TCCATATTTCCTTGCACATGGAAGCTCCCCCCGTCCAGTAGGCAGCCCTA
CGCTTAGGGTGAGGTGGCTGAGACGTGGCATACCCAATCATTTGTGTGCC
GGTTCGTCTATGCTGGCCTTCCGTCGCGTTTGCCAGGCCACCCGCCCAGG
GCTCAGTCCCAGATCCGTCACATCCAGCGGCGACGCTGCCAAGGGAACAA
GTACAGCAGCGGCAGCGGCAGAGCAAGCTGCAGCAGCCGGCAGCACCGTT
AACAACAAAACTCTCGCCACCAAGGGCAGCAGCAGCAGCCGCAGCAGCCG
TGCTAGAAGCACCAATAGCAACACCTGCGGGGCGTGCAAGTCGGACATCG
GTCGATACGCTGCATATTGCTGTCGGGCGTGCGGCAAGCTCTTCCACGGC
AGCTGCGCCGGATACGACAGGAGCAAGAGGCACTTCCCGCCCCCGGACTG
GATTTGTCCGCGATGCCCGAGCGGCGAGCGCGGGCCTGACGATAGCTGCC
TCCACGAGTCTCTCAGAGGCAAGGGGGGGGCGCCGTCCCAGCCGCGAGGC
AACATGCAGTGGTGCCCGAACTGCCTGGGCGACAACCGACTGCCAGGCAA
GAGGTCGATGGGCAACGACAGCAAGAGGTGCCCTGGCTGCAGCCTGCACA
CTCACGCCGGCTGCCGCCGAAAGAGGCCGGGGGCCTCGCCCGGCGCCGCA
GGCGCCGCCGCGGACGGCTCGTGGGCGTGCGACGAGTGCAAGCGTCGGGA
GGACGGCGTTGTTGTGGCCGGCGGTGACGACCGAGTGTGGTTGCGGCTGA
GGGCGGCCAGGCTGGATGGGGGCTACAAGGTTTCGTCACCATCCCCTCTG
CAGCCGCCCTCGACAGCCGCTCCCACCGCCGCTCCCGCCGCCGCTCCCGC
CGCCGCCGCCGCCACCGCCGCCACCGCCCGTGGTTCACCGAGCCGCGTCG
TGATGCAAGCTTTTTCTTCGCTTGGCTCGGCGGCGGCAGCAGCGGCGGCA
GCGTTTCGTCCAGCATCACGTCCGTCTCCTTCTCCTGCTCTGCCTGAGGC
GGCGGGTGACCCAGCGACATCGCCCACGTCGTCGTCGTCGTCGTCGTCGC
CTGCAGCGGCGCCTGCCGCCACCGCGACCAGAGATGCAGCAGAAGACGGG
GACGGTGATCGGAAGGCCAACAGCGGGGATGATGAGGATGATGTAAGCGA
TCCCGCCCGCACGTTATACTGCTGTTTCTTGATTGGAGGTTGTACCATCT
GCACCCACCGCCCCCCCCTAACATGGCAACTCACACGTGGAGCGTGGCGA
AACACTGCACGCACTTACATCAAGGATTTTTTGGTTAGATGGTCGGTCTA
CAGCTCGTGGCAACCCGTAACGGTATCGGGTAACGTAGGTATGACGAGTA
CAGCAGGAAGTGCAGGACTAGTATAGTAGACTGTTCGCCGGTGTAAACTG
TCTTCAATCGCGCGAGGAAATTAAACTTTCTCGATTTCGGATAAGATCTC
CTTGCTCGGGGACTGCCTTTGCACGATTAATAACTTCATGCATGAGGAAT
GAGGAAATAGCACAGGTAGGGGAGGGGGGACGCAGACTGTATTCCCTAAC
CCTAACCCAAACCCAACTTCCCGATTGTATGCTTTATCCAACATGCTTGC
GTAGTACGAAATAACCTGCGAAGGGTATATGCTGTCGCTTGTTGCTCGGC
CGATGGTCTTAAGACCAAGGTAGCATGCAGTGTGGCTGGCGAACAGAATC
AGTTTCAGAACCCTGCCCTGACCGTACGTGCGCAACGAACACGCCTCAAT
GTTCTGCAGGACGGGTCGTTCTCCGCTCACTTCCCTCAGAGTAGCCGAAG
GACCGACGACGGTGGCGGTGGGGGAGCAGGCTCGAAAGGAGGCCACGCCC
CGAGTACAGCAGTGTCAGCACCTGTACCGGTGAGACGAAGGCGAGGAGAG
GCGGCGGCGCGAACGGCAGCGGCAGCGTCAGCCAGGTTCGCAAGAGCCAA
AATGGAAGAACAAGAAGAAAAAATCTGCGGAACCCCCGATGATGATGATG
ATGATGATGACGTCATGATCCCTGCGGGAGGCACTACCCGCGGCTCGAGG
CAAGGCGTGGCGCGCCGGGGTAGCGGCGGCGCCGGCGGGGGCGATGATGC
AAAGGCGGAGCGGCAGGAAAACGGAGCGGAGCAGGCGCCGGAGTCTCCGG
TGCACGGTAGTGGCGGCGGCGGCGGCGGGGCTCGGGAAGATGATGCAGGA
GGATCGACCGATGCTGACGACGAGAGGGAAGAAACGGCGGTGGTGGAAGT
CAAAGCTGACGGCGTTGTTGCGGAAGATGAAGATGATGGAGACGGGTGCG
GTGGTGGCAAGGGTGGCGGCGACGGTGCTAGTAGCGGCAGCGGGAAGGGC
GGCCCGGGGGGGGCGAAGAAGCCACGCGGCTCCGAGGACGCGTACATGTT
GATCTACGTGAAGCGAGGGGTTGCGTGGGGGCCCAGCAGTGCCGAACGAG
ACGCCAAAAAGCTGCCGGAGGATGTGCTGGTGAGCTTCTCCACGCTTTCT
TTCTATCGTGTGTTCGGTCGTGTCGGTGACATCGATCGCAGCCCGTTGCC
GCGTACATGGCGGGGCAGTGACAGCACTTCTCTGATGTGATGTGACACCA
CGCCTGGTGCTTGGGTAGCATGGCATGGCACCGGTGGCGCGTTTCTGACA
ACGTGCGAACGACCGGTTATATGTTTGCTGTTTTGCCCGATTCCTCCGGC
CGTTGTCTGAGCAGGCGGCTGTGCAAGCTTCGAACAAGACGTTGCGTGAT
AACGTGACGAAATACGGCATTGATAAGAGTCTTCTAGAGGGGGACATGCA
CGACAGGCGGGAGCTCTACGCCAGTATATTCGGCCCGCCCCTCAAGCCCC
CACCCCCCGCCGGGCGCAAGGGTAAGCTCCGCCGCTCATTGCGACCATAC
CAATTCTAGTTGCGTGCTTGCTGCACAGAGCGCATGTCCGTAAACTCCAA
GAGCGACCGCTAGAATGCGTGAGCTGTTCTGCACCTCTAGCATGCCAGCG
AAGTACCTGTTTAGGGTATCCCACTAGACCCGGTGAGCTGCTTACATTTC
CCTGATAACCGTTGCGTACTAAATGTGTTCTTCAGCAAATACGACAGCAC
CAATAACCACCAAATCCAAGCGTATCTACCCCGCTGCCACGGGTTTTTTA
TATCTTCCTTGGCGGGAACAGGCAAGGGGAAGGGACCCGCGCAGGCTATA
GTGATCGACGAGGAAAACAACGCAGGGGTTGGAGAGGAGGAAGAGGAAGA
GGAAGAGGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAAGAGGAGG
AGGATAAGGTTGGCGACGGCAAGGACAAGGGCCAGGAAGAGCAGGGAGAA
GGGCCGGCGGCGGCGAAGAGGGCGAGGCGACGCTCGAGGGCTGACTCGTG
CACCGCGGGCGAAGGAGCTACCGCCGCCGCCGCTGGGGGCGACGATGAGG
ATGTAGGAGGTGCGTTGGCTGACTGGCTGCGTGTCGGGGGAATTCGGAGG
AAGGGAGATGTTGAGCGACGGGAAGGGGTCATTTCCCACGAGGAACGTTT
TCGAAGCACAATACCGTAAGGGTTAGGGTTAGGGTTAGGCACCCACCCTA
GCACCCTAGACCGACTTTCACAGCCAACACCAACACCAAGGGGATGGGTG
CAAAGAGAAGAGAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCCCATAT
TGTATGATGTGCATGTGTCTACGGAAGGAAGGAAGGAAGGACGGCCCTCG
ACGAGATAGATAGAAGAAGTTGATGTTGTTGATGTTTCCAAAGCCGCCTT
GTTTAGGCGTTGGTACAGTCTTATTCTTGCCTGTGGAGCAATCTATCGAG
CGTTGAAAACCCGTCTGGGGGGGGGCACACGTGAAGGGATAAGGTATGCG
TCTTAGGTGTTTGTGCTGGTGGGTGGTGAGCAGATTTTTGAAGGTGCCTC
CGTGCATCTGCTGTACATGTGGAAGCTCAAGCTCAAAATCAGAGGCCGCA
CGTTGTATAGCGACTGCGCGCGTGACCTGCAGAGTGAGATCGGTACCGTA
GCACGGGAGTTTTTATTTGAGAGATCGATCCGGCTCGACAATCGCAGGGG
TTACATGACAGAACCAAGACAGCGGCGCTTGTTGTTTTGGCCTGGTGTTC
TTGTTGATGTGTTGATGGTGGTGTTATCCTTCATCCTCATGAACTTCCAT
GACGGACGATGGTTCAGTGCTGTCCCTCGTCGGCGAATGAGATTGTTGCT
GCATGACGCTTTCTACGGGTTCCCCCTATGTTAGAGCCCCCCCTCTCTCT
TGTATTCTCTTCGGCATTACATTAGAAAAAGCTTTCTATACAAGTGTAGT
AGGGCGTCACCTACAAGCCCTACCATTGACCGCAACTACTTACCAGTAAG
CCCCCACCCCGCCATCGCAGTGGACAACGGGCAGCAGCAGCAGCAGCAGC
AGCAGCAGGCAATTGTGCCGTACGTCCACCCCAGCCCCACCGACGAGGAG
CTCAGAAAATCGGCCGCCACAGCGGGAGGGGTCGACGAGGACGCGAGGCA
AGCCGCCGCCGCCTCCGCCGTCGCCGCTGCAGCCGCCGAGGCGGACGAGT
CAACCACCCAGGAGGAGCTCGACTACGCGCAGGCAGTGGCCGCGTCCTTG
GCGCAATCCTCGACCGCCGCCGCCGCTGCCCCCGCCGCCGACAGCGAGGA
TGAGGAACAAGAAGAAGAGCTGCTGCCGAGGAAGATGCCCGAGAGTGAAT
TCTTCTGGGTCCAGACGGAGTGGCTGCGGCAGTGGATCGTCGGACAGCGC
GCCGATCAGGGTGGCGAGCCTGCTGCTGCTGCGGCGGCTACGGCGTTGTC
TCTTGTCGCGAACGGCGGCTCCTCGAGCGGGGACCCCCTAATGCTCGAAA
AGCTCGACGGCGTTGCAGCCTCTGAGGGGGCGGGGGGCGGCGGCAGCGAG
ATGATGGAGGTGGAAGAGACGGCCAAGGCAGCGGGGGAGAGCGAGGCCAG
TGATGATGCCGGAGCCGCCGAAGCCGGCGATGGACCAGAGCCGGATGGCG
CTGCTGCGGCGGCACACAGCAGCGGAGACCCTAAAGAAGAAGCAATACGG
GGGCCTGTGCCGCGGGAGGACGAGGGGGCACCTGAGGAAGAGAGCAACCC
TGGCGCGGAAGAAAGTCTCGCTTGTGTCCGTGATGCTGCCGGTGGGGTGG
AGGGCGACGCGCCAACAGTCCTCAGCTTGACCGAGGGGGTTGAGGAGGGA
AGGCGAGGCATTTTCGAAGACCGCATGAGCAACGTGCCGCTGCTGTGTCC
TCACGGGGGGCTCCACCCGGGGTCGCTGTCCAAGTTTAAGCTGGTCACGA
GGGCCGCCTACGAGGGCATCTTGTCGACGACGTCCATGCCGCCCCCTGAC
TGCCACCTCTCCGCCGAGAACTATTACTGCTCGCTCTGTGTCAAGGACCA
CATCGGGCAAAAGTGAGTTGAGTCGACCGGTTGCTCTCCTTGCAAGCTAT
GCTATCATGCGCGTGTCGTTGTCGTCTACATGCACCCAGCAGCTAGAGCC
TTTAGTGGTCGTTTCGTAGCATGGCCCGTCTTGGAGGTGCTTTTGAAATA
GGTACGTAGAAGGTGTACCTATATTTTGTTTGTTATGTTTGTTACCGAGA
AACCAACGTGCTCTGCGTGACAGTATACGCCCCCCCCCCCTCCCCGCCTC
GTTCTTTTTTGCTTGGTTCCTTGTGATGCCTTGGGGGGAAGGGAGAGCAA
CGTTAACGTGTCTCGCGAGAGCGGAGAGCTGTTGGCCGAGCTGGAAAAGC
CGGAGCCTTCGTGGCTACCACAGCAGCAGCAGCAGCAGCAGCAGCACGAA
GGAACACGCGCGGCAAGAGGCCGAGGGGGGGGGGGGGGGGGGGGAGGGGG
TGCCCCCCCAAGTCCCGTTGGCGATATCACGCAAGGGGGGAGTGGACTTG
AAAGTCTGCCCGGATCAG back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig6747:34..8251+ >mRNA_E_fasciculatus_S2_contig6747.14866.1 ID=mRNA_E_fasciculatus_S2_contig6747.14866.1|Name=mRNA_E_fasciculatus_S2_contig6747.14866.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=3405bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6747:34..8251+ (Ectocarpus fasciculatus EfasUO2) CCACGAGGTGACGAGCCTAGCGCAGGGGGGGGAGAAAGAGGAAAAGGCGT GTCTCTTACTAAGGGGGAGAAGGGGGGCAGTGATGGCGATGGCGATGAGG AGTGCGTGTATGAGCTGCGATGCGTGCTGTACCACAAGGGGAGCAACGTC CACTCCGGGCACATCGTGGCTGAGGCTGACGATGCCGACGGTGGTGAGAA AAAACAAGTTAAAGATCAAGACCAAGACCAACGCGAGGAAAGCGACAGCG ATGGAGGTGCCAAGAACCCTGCCCAGGCAAAGAAGTCCACCACCAACACC AACAAGGCGGCTGGTAGTGGTACTGGTGCTGGTGCTGCCGCCACAGCCAA CAACAAGGGCAAACGCAAGGCCCAGGCGAGAGGGAGCGCGACGGCCGGGA GACAGCGCGGCAAGCGAAGCAAGGTGGTAGAAGAGGAGGAAGACGAGGAC GTGATGCTGGACGACGGGCGAAAGCGCGGGCCTGACGATAGCTGCCTCCA CGAGTCTCTCAGAGGCAAGGGGGGGGCGCCGTCCCAGCCGCGAGGCAACA TGCAGTGGTGCCCGAACTGCCTGGGCGACAACCGACTGCCAGGCAAGAGG TCGATGGGCAACGACAGCAAGAGGTGCCCTGGCTGCAGCCTGCACACTCA CGCCGGCTGCCGCCGAAAGAGGCCGGGGGCCTCGCCCGGCGCCGCAGGCG CCGCCGCGGACGGCTCGTGGGCGTGCGACGAGTGCAAGCGTCGGGAGGAC GGCGTTGTTGTGGCCGGCGGTGACGACCGAGTGTGGTTGCGGCTGAGGGC GGCCAGGCTGGATGGGGGCTACAAGGTTTCGTCACCATCCCCTCTGCAGC CGCCCTCGACAGCCGCTCCCACCGCCGCTCCCGCCGCCGCTCCCGCCGCC GCCGCCGCCACCGCCGCCACCGCCCGTGGTTCACCGAGCCGCGTCGTGAT GCAAGCTTTTTCTTCGCTTGGCTCGGCGGCGGCAGCAGCGGCGGCAGCGT TTCGTCCAGCATCACGTCCGTCTCCTTCTCCTGCTCTGCCTGAGGCGGCG GGTGACCCAGCGACATCGCCCACGTCGTCGTCGTCGTCGTCGTCGCCTGC AGCGGCGCCTGCCGCCACCGCGACCAGAGATGCAGCAGAAGACGGGGACG GTGATCGGAAGGCCAACAGCGGGGATGATGAGGATGATGACGGGTCGTTC TCCGCTCACTTCCCTCAGAGTAGCCGAAGGACCGACGACGGTGGCGGTGG GGGAGCAGGCTCGAAAGGAGGCCACGCCCCGAGTACAGCAGTGTCAGCAC CTGTACCGGTGAGACGAAGGCGAGGAGAGGCGGCGGCGCGAACGGCAGCG GCAGCGTCAGCCAGGTTCGCAAGAGCCAAAATGGAAGAACAAGAAGAAAA AATCTGCGGAACCCCCGATGATGATGATGATGATGATGACGTCATGATCC CTGCGGGAGGCACTACCCGCGGCTCGAGGCAAGGCGTGGCGCGCCGGGGT AGCGGCGGCGCCGGCGGGGGCGATGATGCAAAGGCGGAGCGGCAGGAAAA CGGAGCGGAGCAGGCGCCGGAGTCTCCGGTGCACGGTAGTGGCGGCGGCG GCGGCGGGGCTCGGGAAGATGATGCAGGAGGATCGACCGATGCTGACGAC GAGAGGGAAGAAACGGCGGTGGTGGAAGTCAAAGCTGACGGCGTTGTTGC GGAAGATGAAGATGATGGAGACGGGTGCGGTGGTGGCAAGGGTGGCGGCG ACGGTGCTAGTAGCGGCAGCGGGAAGGGCGGCCCGGGGGGGGCGAAGAAG CCACGCGGCTCCGAGGACGCGTACATGTTGATCTACGTGAAGCGAGGGGT TGCGTGGGGGCCCAGCAGTGCCGAACGAGACGCCAAAAAGCTGCCGGAGG ATGTGCTGGCGGCTGTGCAAGCTTCGAACAAGACGTTGCGTGATAACGTG ACGAAATACGGCATTGATAAGAGTCTTCTAGAGGGGGACATGCACGACAG GCGGGAGCTCTACGCCAGTATATTCGGCCCGCCCCTCAAGCCCCCACCCC CCGCCGGGCGCAAGGGCAAGGGGAAGGGACCCGCGCAGGCTATAGTGATC GACGAGGAAAACAACGCAGGGGTTGGAGAGGAGGAAGAGGAAGAGGAAGA GGAGGAGGAGGAGGAGGAGGGGGAGGAGGAGGAGGAAGAGGAGGAGGATA AGGTTGGCGACGGCAAGGACAAGGGCCAGGAAGAGCAGGGAGAAGGGCCG GCGGCGGCGAAGAGGGCGAGGCGACGCTCGAGGGCTGACTCGTGCACCGC GGGCGAAGGAGCTACCGCCGCCGCCGCTGGGGGCGACGATGAGGATGTAG GAGGGGTCGACGAGGACGCGAGGCAAGCCGCCGCCGCCTCCGCCGTCGCC GCTGCAGCCGCCGAGGCGGACGAGTCAACCACCCAGGAGGAGCTCGACTA CGCGCAGGCAGTGGCCGCGTCCTTGGCGCAATCCTCGACCGCCGCCGCCG CTGCCCCCGCCGCCGACAGCGAGGATGAGGAACAAGAAGAAGAGCTGCTG CCGAGGAAGATGCCCGAGAGTGAATTCTTCTGGGTCCAGACGGAGTGGCT GCGGCAGTGGATCGTCGGACAGCGCGCCGATCAGGCCTCTGAGGGGGCGG GGGGCGGCGGCAGCGAGATGATGGAGGTGGAAGAGACGGCCAAGGCAGCG GGGGAGAGCGAGGCCAGTGATGATGCCGGAGCCGCCGAAGCCGGCGATGG ACCAGAGCCGGATGGCGCTGCTGCGGCGGCACACAGCAGCGGAGACCCTA AAGAAGAAGCAATACGGGGGCCTGTGCCGCGGGAGGACGAGGGGGCACCT GAGGAAGAGAGCAACCCTGGCGCGGAAGAAAGTCTCGCTTGTGTCCGTGA TGCTGCCGGTGGGGTGGAGGGCGACGCGCCAACAGTCCTCAGCTTGACCG AGGGGGTTGAGGAGGGAAGGCGAGGCATTTTCGAAGACCGCATGAGCAAC GTGCCGCTGCTGTGTCCTCACGGGGGGCTCCACCCGGGGTCGCTGTCCAA GTTTAAGCTGGTCACGAGGGCCGCCTACGAGGGCATCTTGTCGACGACGT CCATGCCGCCCCCTGACTGCCACCTCTCCGCCGAGAACTATTACTGCTCG CTCTGTGTCAAGGACCACATCGGGCAAAAGGAGAGCAACGTTAACGTGTC TCGCGAGAGCGGAGAGCTGTTGGCCGAGCTGGAAAAGCCGGAGCCTTCGT GGCTACCACAGCAGCAGCAGCAGCAGCAGCAGCACGAAGGAACACGCGCG GCAAGAGGCCGAGGGGGGGGGGGGGGGGGGGGAGGGGGTGCCCCCCCAAG TCCCGTTGGCGATATCACGCAAGGGGGGAGTGGACTTGAAAGTCTGCCCG GATCA back to top
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