mRNA_E_fasciculatus_S2_contig6742.14863.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L695_9PHAE) HSP 1 Score: 549 bits (1415), Expect = 2.070e-187 Identity = 282/294 (95.92%), Postives = 284/294 (96.60%), Query Frame = 1
Query: 1 PSTHNTQDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQEQVAWIQEELTEKAKASVGKSVASGGDASPAPSPAAAKKRRIGGA 882
P N +DGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTG GFSS ELRRTLSFLEFYLEQLSAAQGLVQESHRLLALY HAVPKGLGDDLATEMLQEQVAWIQEELTEKAKA VGKSV SGGDASP+PSPAA KKRRIGGA
Sbjct: 370 PVYMNPKDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGAGFSSGELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYGHAVPKGLGDDLATEMLQEQVAWIQEELTEKAKAFVGKSVTSGGDASPSPSPAATKKRRIGGA 663
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM3_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 1.030e-171 Identity = 254/262 (96.95%), Postives = 257/262 (98.09%), Query Frame = 1
Query: 1 PSTHNTQDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQEQVAWIQEELTEK 786
P N +DGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSS ELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQEQVAWIQEELT++
Sbjct: 335 PVYMNPKDGGQAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSGELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQEQVAWIQEELTDE 596
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQZ5_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 7.330e-17 Identity = 53/174 (30.46%), Postives = 97/174 (55.75%), Query Frame = 1
Query: 31 QAAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDED-KGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGP-DLDNDVTCDGLKLVIEDLCEVWSLFQQKL 546
Q++ + PY MTLHK+W +M E+D+RT SK+ Y+LH + R ++ ES F ++EM R + K +YF ++I +D G + +++ AYA++VL R ++F + + +++++ + L+KA + + L + D N +T LKL+ DL +++ F L
Sbjct: 127 QSSMDDDPYHMTLHKIWTKMCEKDWRTVSKSFYLLHCIVRDSSVESCEEFTDAIKEMSRTRNPKKPDHKYFDLKLIKQLDSFGNSYKDFVVAYAQYVLYRSKNFHAKFNQFDELNSKSKETEVVALLKKAQQSLNLGLKVSLTKKDQYNAITGQILKLLAIDLRDLYQQFTSTL 300
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2T5_PHATC) HSP 1 Score: 92.8 bits (229), Expect = 1.330e-16 Identity = 68/243 (27.98%), Postives = 110/243 (45.27%), Query Frame = 1
Query: 55 YWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVI--SNVDDDGRPFSEWLDAYAEFVLLRLQSFS---------PELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQL-SAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQ 747
Y L KLW +MAE+D+RT K++Y+LHR + E ++ L+E+RR D K +YF+ + + + + F ++ YA +VLLR Q F P+L + A T S LE AA L++A +AC+ L D C+ + E + + I L + + + EFY E+L + +V+++ L Y +P +G L+ EMLQ
Sbjct: 294 YDAVLRKLWGKMAEKDWRTTIKSLYILHRFSADGAPEHAAALKARLRELRRTRDPKRKDKYFNSKQLLAGESNPENIKFRAFMSRYAHYVLLRAQCFGGLFDEISQEPKLDKKKPPKAITTTSLRSEHLEAAAMLLKAGVACQ----LKEDEACENTAIAAERVASDLIGLTTSVAIALNRALKSSDLKGGDPELLKKWCEFYSEELLPQTRAMVKKTSSKLDAYGLFLPSRMGASLSPEMLQ 532
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: ENTH (domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DHA3_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 6.090e-16 Identity = 70/230 (30.43%), Postives = 114/230 (49.57%), Query Frame = 1
Query: 52 PYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDD-DGRPFS---------EWLDAYAEFVLLRLQSFSPELGELAAI-DAETPHEKASRSLEKAAKLIEAALACEIGP---DLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTG-GGFSSAELRRTLS-FLEFYLEQLSAAQGLVQESHRLLALY 693
PY +TL KLW +MAERD+RT +KA+Y+ H L R + ++ +M R+ K T+SRYF IS VD DG +++ Y+++VL R ++F+ + E+ I E + L KA K++ + L C +G D D++VT +LV D+ ++ LF +KL + + G AE+ + L F Y Q + ++ +LL +Y
Sbjct: 295 PYRVTLRKLWAKMAERDWRTVAKALYLFHVLLRECEPDDVRIYKKVCAKMSREGCKKTRSRYFDAGAISAVDVMDGAGVGGAGACLDRRDFIARYSKYVLQRAKTFTSKFEEMKVIGQREIEAKDLVGQLGKAEKVLSSGLECALGEAEEDADSEVTLMCAELVARDVYDLSRLFHEKLRWAIDNQAAAFEGADRAEVAKILERFQASYARLYPQVQQFLTQTAQLLGVY 524
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VB79_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 3.490e-15 Identity = 69/250 (27.60%), Postives = 117/250 (46.80%), Query Frame = 1
Query: 55 YWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVD--DDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRS----------------LEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQL-SAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQ 747
Y L KLW +MAE+D+RT KA+Y+LHR + + ++ L+E+RR D K +YF+ + + D + +PF ++ YA +VLLR Q F E+ + P K + LE + L++A AC + + + T L+ V DL + + L L+ R + G A ++R + EFY E+L + +V+++ L Y +P +G +A E+L+
Sbjct: 326 YDAVLRKLWNKMAEKDWRTTIKALYILHRFSSDGGPDHQAALKARLRELRRTRDPKRKEKYFNSKQLLEGDATPENQPFRAFMARYAHYVLLRAQCFGGMFTEIKENPSAPPSSKKPSAAAAQKPITSTSLRPEHLEASQLLLKAGCACALKDGEECESTALALERVASDLIGLNTAVAIALNRALRGRESKGPVDQALIKR---WCEFYSEELLPKTKKMVKKTSAKLDAYGLFLPSRMGASVAPELLK 572
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: ENTH (domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZTH1_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 5.640e-15 Identity = 70/246 (28.46%), Postives = 119/246 (48.37%), Query Frame = 1
Query: 55 YWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVI--SNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDA-ETPHEKASRS-----------LEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQL-SAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQ 747
Y L KLW +MAE+D+RT KA+Y+LHR + + E ++ ++E+RR D K ++FS +++ + ++ + +L YA +VLLR Q F E+AA A +T +KA+ L+ A L+E LAC + +N+ T ++ V DL + + L L+ G A+ + EFY E L + +V+++ L Y +P +G L+ ++LQ
Sbjct: 268 YDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPEHAPALKARVRELRRTRDPKRKGKFFSSKLLLAGDTSEETAKYRAFLGRYAHYVLLRAQCFGGMFDEIAAPSAKDTKKKKAAPKPITSTSLKADHLDAAKLLLETGLACVLKKGEENENTALAVERVASDLLGLTTAVTGALTRALKDDDLKG----ADPVLIKKWCEFYSESLLPQTRSMVKKTAPTLDAYGLFLPSRMGPTLSQDLLQ 509
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: ENTH (domain-containing protein (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FBW9_9STRA) HSP 1 Score: 83.2 bits (204), Expect = 1.020e-13 Identity = 65/245 (26.53%), Postives = 117/245 (47.76%), Query Frame = 1
Query: 55 YWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDD--DGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKA-----------SRSLEKAAKLIEAALACEIGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQL-SAAQGLVQESHRLLALYSHAVPKGLGDDLATEMLQ 747
Y L KLW +MAE+D+RT KA+Y+LHR + + + ++ ++E+RR D K ++FS +++ DD + F ++ YA +VLLR Q F E+AA + +KA S L+ A L++ +AC + N+ T ++ V DL + + L L+ G +++ + EFY E L + +V+++ L + +P +G ++ ++LQ
Sbjct: 78 YDAVLRKLWAKMAEKDWRTTIKALYILHRFSADGSPDHAPALKARVRELRRTRDPKRKGKFFSSKLLQAGDDKPESAKFRAFMGRYAHYVLLRAQCFGGMFDEIAAPPSADKKKKAAPKPITSTSLRSDHLDAAKLLLKTGVACVLKNGEANENTALAVERVASDLLGLTTAVATALNRALKNDADLKGADPVLIKQ---WCEFYSEVLLPQTRSMVKQTTPKLDAFGLFLPSRMGASVSPDLLQ 319
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: ENTH (domain-containing protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB97_VAULI) HSP 1 Score: 82.0 bits (201), Expect = 1.930e-13 Identity = 62/233 (26.61%), Postives = 112/233 (48.07%), Query Frame = 1
Query: 43 KEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGRPFSEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRS-----LEKAAKLIEAALACE-IGPDLDNDVTCDGLKLVIEDLCEVWSLFQQKLEIRLQQRFTGGGFSSAELRRTLSFLEFYLEQLSAAQGLVQESHRLLALYSH---AVPKG 714
+EGPY M L KLWR+M D+RT++K++Y+LHRLA T+AES+ +F T E+R + F + I + +++ A+FV R++ SP++ L EK S ++ K IE + C + D+ +++ D L+ D ++W L++ +E ++ S EL + EF+ + + L ++ +++ Y ++PKG
Sbjct: 133 EEGPYHMLLLKLWRQMKSSDWRTSTKSLYILHRLAIETSAESYTHFHRTFLELR----ASVQPPPFEPKQIKRSPQNNEKM-KFIKKQAKFVFNRIEQISPDINSL--FSEMCAMEKVSTETILAWMKNLQKAIEVGIECSGLLNDIGSEIEADSSLLIANDTVKLWELYEALME-KISSAEKTENNSEFELLK-----EFHGKNVKKVISLAKKGNKIAKFYGFERISIPKG 352
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BXP2_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 3.530e-13 Identity = 61/214 (28.50%), Postives = 102/214 (47.66%), Query Frame = 1
Query: 34 AAWKEGPYWMTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDEDKGTKSRYFSRRVISNVDDDGR-PF----SEWLDAYAEFVLLRLQSFSPELGELAAIDAETPHEKASRSLEKAAKLIEAALACEIGPDL-DNDVTCDGLKLVIEDLC-------EVWSLFQQKLEIRLQQRFT----GGGFSSAELRRTLSFLE 624
+A+ Y+M LHKLW RMAE D+RT +K++++ HR+A F M+R K TK+ Y++ + V DDG PF +++L AYA F R SFS EL ++D K L++A +++E ++ + L ++V L + D +W +F ++L L + T GG + +++ T +E
Sbjct: 14 SAYNSDYYFMMLHKLWSRMAEHDWRTVAKSLFIFHRMAVSVDPSLHLEFVQRFNRMQRLTHKKTKATYYNLETLLTVRDDGAAPFGPGTAKFLRAYAVFCFERFLSFSGRFEELDSLDEGADLRKLLGQLKQARRVLEKSVQLKTSKSLLRHEVVAQCSALAMADCFVAERGRRSLWEVFGERLGALLSAQRTEAERGGRLAPSDIEATSRLVE 227 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig6742.14863.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig6742.14863.1 >prot_E_fasciculatus_S2_contig6742.14863.1 ID=prot_E_fasciculatus_S2_contig6742.14863.1|Name=mRNA_E_fasciculatus_S2_contig6742.14863.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=380bp MTLHKLWRRMAERDYRTASKAVYVLHRLARGTTAESWGYFRSTLQEMRRDback to top mRNA from alignment at E_fasciculatus_S2_contig6742:128..4730+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig6742.14863.1 ID=mRNA_E_fasciculatus_S2_contig6742.14863.1|Name=mRNA_E_fasciculatus_S2_contig6742.14863.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4603bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6742:128..4730+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig6742:128..4730+ >mRNA_E_fasciculatus_S2_contig6742.14863.1 ID=mRNA_E_fasciculatus_S2_contig6742.14863.1|Name=mRNA_E_fasciculatus_S2_contig6742.14863.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1140bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig6742:128..4730+ (Ectocarpus fasciculatus EfasUO2)back to top |