prot_E-fasciculatus_F_contig16217.4234.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16217.4234.1
Unique Nameprot_E-fasciculatus_F_contig16217.4234.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length417
Homology
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 430 bits (1106), Expect = 2.730e-139
Identity = 307/426 (72.07%), Postives = 323/426 (75.82%), Query Frame = 0
Query:    1 MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSEVDCLETVEYSTAFAVVSKDKGNDKGNDDRGCTDAS-IDLVGDKTHPTSSRSSR-SEEKGGGVESAGMMGGDDEAFGAQGAEEASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRQXXXXXXXXXXXXXXXXXXXXXXXXXXHRDSTVPATTATPIRTPTPAGAWFRGLPSSLARLFARPGDGGGGXXXXXXEGRRQWQRIDDEGSDGEEKLDDDRGDTGNDDESPLDEETRRMRVVNANIAAFFGGAEPSPHVSPESLGNSNSSHGXXXXXXXXSDVGGEMEVDGRSSALRGLFGGNRFDGDGGRRRGRGGA-AEYELAPIGPAAAAA-------AVDAEVTRNSDIV 416
            MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSE+DCLETVEYSTA ++VSKDKGND  +   G  D+S ++L+G+K  P++SRSS  SEEK GGVESAGMMGG D AF AQGAE AS ADC+ICLGGFE+GDVLRKLPCLH FHQKCVDEWLHLSVSCPLCKRSAREGLRR XXXXXXXXXXXXXXXXXXXXXXXXXX            P RTPTP GAWFRGLP SLARLFA  GDG   XXXXXX               GEEK DDDRGDTGNDD SPLD ETRRMRV+NANIAAFFGGAEPSPHVSPESLG+S S  G  XXXXXX                RG+FGGNRF            A AEYELAPIGPAAA         AVDA VTRNSDIV
Sbjct:  523 MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSELDCLETVEYSTAVSIVSKDKGNDDISCMDGGGDSSGVELIGEKVDPSNSRSSSGSEEKRGGVESAGMMGGGDGAFIAQGAEAASSADCSICLGGFEDGDVLRKLPCLHLFHQKCVDEWLHLSVSCPLCKRSAREGLRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPXXXXXA--PTRTPTPVGAWFRGLPPSLARLFAHSGDGXXXXXXXXXXXXXXXXXXXXXXX-GEEKFDDDRGDTGNDDGSPLDGETRRMRVLNANIAAFFGGAEPSPHVSPESLGSS-SPGGSIXXXXXXXXXXXXXXXXXXXXXXRGVFGGNRFXXXXXXXXXXXXASAEYELAPIGPAAAXXXXXXXXXAVDAGVTRNSDIV 944          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 381 bits (979), Expect = 2.640e-117
Identity = 250/321 (77.88%), Postives = 267/321 (83.18%), Query Frame = 0
Query:    1 MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGLSPSEVDCLETVEYSTAFAVVSKDKGNDKGN--DDRGCTDASIDLVGDKTHPTSSRSSRSEEKGGG-VESAGMMGGDDEAFGAQGAEEASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRQXXXXXXXXXXXXXXXXXXXXXXXXXXHRDSTVPATTATPIRTPTPAGAWFRGLPSSLARLFARPGDGGGGXXXXXXE-GRRQWQRIDDEGSDGEEKLDDDRGDTGNDDESPLDEETRRMRVVNANIA 317
            MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRR FSRHRGLSPSE+DCLETVEYSTA  +VSKDKGND  +   D G   + ++L+G+K  PTSSRSS         VESAG+ GGDDEAF AQGAE AS ADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRR XXXXXXXXXXXXXXXXXXXXXXXXXX           TP+      GAWFRGLPSSLARLFA  GDG   XXXXXX  GRRQWQR+DD+GS+GEEKLDDDRGDTG+D++SPLD ETRRMRV+NANIA
Sbjct: 1038 MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRAFSRHRGLSPSELDCLETVEYSTAIDIVSKDKGNDDNSCAADGGGDSSGVELIGEKVSPTSSRSSSGXXXXXXXVESAGVTGGDDEAFIAQGAEAASSADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPV------GAWFRGLPSSLARLFAHSGDGXXXXXXXXXXXGRRQWQRVDDDGSNGEEKLDDDRGDTGHDEDSPLDGETRRMRVLNANIA 1352          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: UPI0008A0F666 (RING-H2 finger protein ATL70-like n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI0008A0F666)

HSP 1 Score: 75.5 bits (184), Expect = 2.790e-12
Identity = 31/57 (54.39%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  133 EEASPADCAICLGGFEEGDVLRKLP-CLHFFHQKCVDEWLHLSVSCPLCKRSAREGL 188
            EE     C+ICLG +EE DVLR LP C HFFH +C+D WL L  +CP+C++S  E L
Sbjct:   72 EEIGGGSCSICLGEYEESDVLRPLPECRHFFHMECIDPWLRLHATCPICRKSPEEQL 128          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A2G5BKA4_COERN (RING-type domain-containing protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BKA4_COERN)

HSP 1 Score: 77.8 bits (190), Expect = 3.890e-12
Identity = 30/43 (69.77%), Postives = 36/43 (83.72%), Query Frame = 0
Query:  140 CAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKR 182
            CAICL  +++GD+LR LPC H  HQKCVDEWLH++ SCPLCKR
Sbjct:  257 CAICLCEYDDGDILRLLPCNHHLHQKCVDEWLHINQSCPLCKR 299          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A5B8MYU6_9CHLO (RING-type E3 ubiquitin transferase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYU6_9CHLO)

HSP 1 Score: 77.0 bits (188), Expect = 4.170e-12
Identity = 28/53 (52.83%), Postives = 39/53 (73.58%), Query Frame = 0
Query:  139 DCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRQ 191
            DC++C+  FEEGD +R+LPC H FH +CVDEWL L  SCP+C+   R+ L+ +
Sbjct:  112 DCSVCMEAFEEGDRIRELPCGHMFHLECVDEWLKLHPSCPICREDVRDALKEE 164          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A0A9DQ84_ARUDO (RING-type domain-containing protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9DQ84_ARUDO)

HSP 1 Score: 71.2 bits (173), Expect = 5.440e-12
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  135 ASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSARE 186
            A   +C ICL  +++G  LR+LPC H FH  C+D+WLH++ +CPLCK S R+
Sbjct:   16 AEAMECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKYSVRK 67          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A1Y1VZL6_9FUNG (RING-type domain-containing protein n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1VZL6_9FUNG)

HSP 1 Score: 77.4 bits (189), Expect = 6.890e-12
Identity = 33/55 (60.00%), Postives = 39/55 (70.91%), Query Frame = 0
Query:  133 EEASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREG 187
            + A+   CAICL  +E GDVLR LPC H  HQ CVDEWLH++ +CPLCKR A  G
Sbjct:  277 QNANDDMCAICLCEYENGDVLRLLPCGHHMHQSCVDEWLHINRTCPLCKRVATPG 331          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A261Y600_9FUNG (RING-type domain-containing protein n=1 Tax=Bifiguratus adelaidae TaxID=1938954 RepID=A0A261Y600_9FUNG)

HSP 1 Score: 76.6 bits (187), Expect = 9.480e-12
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  135 ASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSA 184
            A  A CAIC+  +E+GD+LR LPC H FHQ CVDEW+ L+ +CPLCK+SA
Sbjct:  289 AQDAVCAICICDYEQGDLLRLLPCRHHFHQSCVDEWMSLNRACPLCKQSA 338          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A4P9XK66_9FUNG (RING-type domain-containing protein (Fragment) n=1 Tax=Thamnocephalis sphaerospora TaxID=78915 RepID=A0A4P9XK66_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 1.200e-11
Identity = 25/44 (56.82%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  140 CAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRS 183
            C+ICL  +EEG+ LR+L C H+FHQ CVD+WLH++  CP+CK++
Sbjct:   91 CSICLADYEEGETLRQLQCHHYFHQSCVDQWLHINAHCPVCKQA 134          
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Match: A0A7S0UXP0_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UXP0_9CHLO)

HSP 1 Score: 73.2 bits (178), Expect = 1.260e-11
Identity = 29/60 (48.33%), Postives = 43/60 (71.67%), Query Frame = 0
Query:  130 QGAEEASPADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLR 189
            QG++EA+   CAICL  F+ G+ L+ LPC H++H +C+DEWL   V+CPLCK +  E ++
Sbjct:   60 QGSDEANRDCCAICLAPFDVGEKLKWLPCKHYYHVQCIDEWLGRDVTCPLCKANVLESVK 119          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16217.4234.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LLL6_9PHAE2.730e-13972.07RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FI05_ECTSI2.640e-11777.88RING-type domain-containing protein n=1 Tax=Ectoca... [more]
UPI0008A0F6662.790e-1254.39RING-H2 finger protein ATL70-like n=1 Tax=Eucalypt... [more]
A0A2G5BKA4_COERN3.890e-1269.77RING-type domain-containing protein n=1 Tax=Coeman... [more]
A0A5B8MYU6_9CHLO4.170e-1252.83RING-type E3 ubiquitin transferase n=1 Tax=Chlorop... [more]
A0A0A9DQ84_ARUDO5.440e-1250.00RING-type domain-containing protein n=1 Tax=Arundo... [more]
A0A1Y1VZL6_9FUNG6.890e-1260.00RING-type domain-containing protein n=1 Tax=Linder... [more]
A0A261Y600_9FUNG9.480e-1262.00RING-type domain-containing protein n=1 Tax=Bifigu... [more]
A0A4P9XK66_9FUNG1.200e-1156.82RING-type domain-containing protein (Fragment) n=1... [more]
A0A7S0UXP0_9CHLO1.260e-1148.33Hypothetical protein (Fragment) n=1 Tax=Polytomell... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 132..220
NoneNo IPR availablePANTHERPTHR14155:SF496E3 UBIQUITIN-PROTEIN LIGASE ATL41coord: 132..220
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..416
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..18
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..30
score: 0.579
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 133..185
NoneNo IPR availableTMHMMTMhelixcoord: 3..25
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 139..181
e-value: 0.0014
score: 14.6
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 140..180
e-value: 4.9E-7
score: 39.4
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 139..181
e-value: 2.9E-12
score: 46.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 140..181
score: 12.224
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 125..189
e-value: 1.3E-18
score: 68.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16217contigE-fasciculatus_F_contig16217:51..2402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16217.4234.1mRNA_E-fasciculatus_F_contig16217.4234.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16217 19..2663 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16217.4234.1 ID=prot_E-fasciculatus_F_contig16217.4234.1|Name=mRNA_E-fasciculatus_F_contig16217.4234.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=417bp
MMLVALSIMTAFLTMCLFLARALMLRGVLAMEGDRHGTLRRRVFSRHRGL
SPSEVDCLETVEYSTAFAVVSKDKGNDKGNDDRGCTDASIDLVGDKTHPT
SSRSSRSEEKGGGVESAGMMGGDDEAFGAQGAEEASPADCAICLGGFEEG
DVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKRSAREGLRRQRRRRRRARA
AAEAAAAAAAQQAQQQQHRDSTVPATTATPIRTPTPAGAWFRGLPSSLAR
LFARPGDGGGGRGGGGREGRRQWQRIDDEGSDGEEKLDDDRGDTGNDDES
PLDEETRRMRVVNANIAAFFGGAEPSPHVSPESLGNSNSSHGGSSSSSSS
SDVGGEMEVDGRSSALRGLFGGNRFDGDGGRRRGRGGAAEYELAPIGPAA
AAAAVDAEVTRNSDIV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
IPR011016Znf_RING-CH