prot_E-fasciculatus_F_contig16215.4233.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-fasciculatus_F_contig16215.4233.1
Unique Name	prot_E-fasciculatus_F_contig16215.4233.1
Type	polypeptide
Organism	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length	281

Homology

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: D8LIE1_ECTSI (Rhodanese Homology Domain superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE1_ECTSI)

HSP 1 Score: 459 bits (1181), Expect = 1.600e-153
Identity = 243/282 (86.17%), Postives = 252/282 (89.36%), Query Frame = 0

Query:    1 MGFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSREDLRASLMRTEREAMGLPPLPTPSLTSGSTPTEVGGAAETANDGVQGGVPEPAGLEEAAAIRTEA-EEEEELMWLVWPFQDPTLNMMFDRAFDEFQDSAPTGDDDSVVEQDSSRMIGIVSRLGGGRRALAVGLGSGGAAGRAGLRRLAEALGEGDGGELFVVEASSEAASAARGLSLVAQARGC 281
            MGFTNVTRL GGIISYA FAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCG PCADHTNCAN CCHARLIQC SCASKY  CCSRGCD+QRSREDLRASLMR+EREAMGLPPLPTP L   STPT  GGA E  +D  QGGVP  AGLEEA AIRTE  E+E EL+WLVWPFQDPTLN+MFDRAFDE++DSAPTGDD S VEQDSSRMIGIVSRLGGG+RALAVGLGSGGAAGRAGLRRLAEALGEG  GELFVVEAS EAASAARGLSLVAQ RGC
Sbjct:  440 MGFTNVTRLGGGIISYANFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGVPCADHTNCANSCCHARLIQCESCASKYKGCCSRGCDDQRSREDLRASLMRSEREAMGLPPLPTPPLPLDSTPTAAGGAGEAVDDDAQGGVPGSAGLEEATAIRTETLEDEGELLWLVWPFQDPTLNLMFDRAFDEYRDSAPTGDDGSTVEQDSSRMIGIVSRLGGGKRALAVGLGSGGAAGRAGLRRLAEALGEG--GELFVVEASYEAASAARGLSLVAQGRGC 719

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A6H5L4H6_9PHAE (Rhodanese domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H6_9PHAE)

HSP 1 Score: 442 bits (1137), Expect = 9.520e-147
Identity = 238/282 (84.40%), Postives = 250/282 (88.65%), Query Frame = 0

Query:    1 MGFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSREDLRASLMRTEREAMGLPPLPTPSLTSGSTPTEVGGAAETANDGVQGGVPEPAGLEEAAAIRTEAEE-EEELMWLVWPFQDPTLNMMFDRAFDEFQDSAPTGDDDSVVEQDSSRMIGIVSRLGGGRRALAVGLGSGGAAGRAGLRRLAEALGEGDGGELFVVEASSEAASAARGLSLVAQARGC 281
            MGFTNVTRL+GGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGD LSKCHQCG PCADHTNCAN CCHARLIQC SCASKY  CCSRGCD+QRSREDLRASLMR+EREAMGLP LPT SL   S    V  A E   D VQG V + AGLEEAAAIRTEA+E EEEL+WLVWPFQDPTLN+MFDRAFDE++DSAPTGDD S VEQDSSRMIGI+SRLGGG+RALAVGLGSG AAGRAGLRRLAEALGEG  GELF VEASSEAA+AARGLSLVAQARGC
Sbjct:  484 MGFTNVTRLQGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDKLSKCHQCGVPCADHTNCANSCCHARLIQCESCASKYKGCCSRGCDDQRSREDLRASLMRSEREAMGLPSLPTSSLPVDSPLKPVAEAIEGVVDDVQGDVSKSAGLEEAAAIRTEAQEDEEELLWLVWPFQDPTLNLMFDRAFDEYRDSAPTGDDGSAVEQDSSRMIGIISRLGGGKRALAVGLGSGSAAGRAGLRRLAEALGEG--GELFAVEASSEAATAARGLSLVAQARGC 763

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A835YRN1_9STRA (Rhodanese domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRN1_9STRA)

HSP 1 Score: 154 bits (389), Expect = 6.440e-39
Identity = 94/231 (40.69%), Postives = 127/231 (54.98%), Query Frame = 0

Query:    1 MGFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSREDLRASLMRTEREAMGLPPLPTPSLTSGSTPTEVGGAAETANDGVQGGVPEPAGLEEAAAIRTEAEEEEELMWLV-WPFQDPTLNMMFDRAFDEFQDSAP--TGDDDSVVEQDSSRMIGIVSRLGGGRRALAV 228
            +G+TNV RLEGGI+SYA++A+  G+ S+F+G NYVFD RM +++T D+L+ CHQCG PC D  NCAN  CH R IQCP CA +Y +CCS GC +QR+ E   ASL              +P + + +   E GG A  A         +P  L +               WL   PFQ   LN++FDR  +  +D A   +GDD+ V        +G V+RLGG + AL V
Sbjct:  360 LGYTNVARLEGGIVSYARYARAAGVASRFRGKNYVFDGRMAERITEDVLAACHQCGAPCDDQRNCANDRCHTRFIQCPQCAQRYQSCCSNGCVQQRAYEAGLASL--------------SPRVGALAAAEEHGGDASEA---------QPDALPQXXXXXXXRSPLALQPWLQPQPFQSAPLNLLFDRVIEAHRDGADDDSGDDEIVAA------LGDVARLGGAKDALVV 561

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A2W4P2V6_9BACT (Rhodanese domain-containing protein (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A2W4P2V6_9BACT)

HSP 1 Score: 131 bits (330), Expect = 5.320e-34
Identity = 57/93 (61.29%), Postives = 68/93 (73.12%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDE 94
            GF NV +L GGII YA+  KE GLE+KF G N+VFD+R+G+++T D++S CHQCG PC DHTNC N  CH   IQCPSC  KYN CCS  C E
Sbjct:   70 GFNNVYQLRGGIIEYARQVKEEGLENKFIGKNFVFDERLGERITDDIISTCHQCGAPCDDHTNCKNDGCHLLFIQCPSCKEKYNNCCSETCAE 162

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A1M3R1U5_9SPHI (tRNA uridine(34) hydroxylase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1M3R1U5_9SPHI)

HSP 1 Score: 134 bits (338), Expect = 1.170e-33
Identity = 58/93 (62.37%), Postives = 70/93 (75.27%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDE 94
            GF NV  LEGGII+YAK  KE+GLESKF G N+VFD R+G+++T D++++CHQCG PC DHTNC N  CH   IQC  CA KY+ CCS GC E
Sbjct:  216 GFKNVFHLEGGIINYAKQVKEQGLESKFIGKNFVFDDRLGERITSDIIARCHQCGEPCDDHTNCKNDGCHLLFIQCKKCAEKYSGCCSTGCQE 308

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A379FTE6_PRORE (tRNA uridine(34) hydroxylase n=13 Tax=Providencia TaxID=586 RepID=A0A379FTE6_PRORE)

HSP 1 Score: 133 bits (335), Expect = 3.390e-33
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSREDLRASLMRTERE 111
            GF NV  +EGGII YA+ AKE+GL  +FKG N+VFD RMG+++T D L++CHQCG PC  HTNCAN  CH   IQCPSCA KY  CCS  C E+    +      R  RE
Sbjct:  217 GFKNVYHVEGGIIEYARKAKEQGLPLRFKGKNFVFDNRMGERITEDTLAQCHQCGVPCDAHTNCANDGCHLLFIQCPSCAEKYEGCCSSSCTEEMKLPEQEQRARRAGRE 326

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A1M3EBD4_9BACT (tRNA uridine(34) hydroxylase n=1 Tax=Bacteroidetes bacterium 43-16 TaxID=1895923 RepID=A0A1M3EBD4_9BACT)

HSP 1 Score: 133 bits (334), Expect = 5.440e-33
Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGC--------DEQRSR 98
            GF NV  +EGGII YA+ AKE+GLESKF G N+VFD+R+G+++T D++S+CHQCGTPC  HTNC N  CH   IQCPSC +KY+ CCS  C        +EQR R
Sbjct:  217 GFKNVFHVEGGIIEYARKAKEQGLESKFIGKNFVFDERLGERITEDIISECHQCGTPCDSHTNCNNDGCHLLFIQCPSCKAKYDGCCSEDCTAEYHLPVEEQRER 321

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A1T4L8R6_9BACT (tRNA uridine(34) hydroxylase n=1 Tax=Sediminibacterium ginsengisoli TaxID=413434 RepID=A0A1T4L8R6_9BACT)

HSP 1 Score: 132 bits (333), Expect = 6.500e-33
Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDE 94
            GF NV  LEGGII+YAK  KE GL+S+F G N+VFD R+G+++T D+++KCHQCG PC  HTNCAN  CH   IQCPSCA++Y  CCS+ C E
Sbjct:  216 GFENVFHLEGGIINYAKQTKEEGLDSRFIGKNFVFDNRLGERITEDVIAKCHQCGQPCDTHTNCANDGCHLLFIQCPSCAAEYEGCCSKECHE 308

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: A0A264VZJ7_PRORE (tRNA uridine(34) hydroxylase n=29 Tax=Morganellaceae TaxID=1903414 RepID=A0A264VZJ7_PRORE)

HSP 1 Score: 132 bits (331), Expect = 1.300e-32
Identity = 60/110 (54.55%), Postives = 72/110 (65.45%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSREDLRASLMRTERE 111
            GF NV  +EGGII YA+ AKE+GL  +FKG N+VFD RMG+++T D L++CHQCG PC  HTNC N  CH   IQCPSCA KY  CCS  C E+    +      R  RE
Sbjct:  217 GFKNVYHVEGGIIEYARKAKEQGLPLRFKGKNFVFDNRMGERITEDTLAQCHQCGAPCDTHTNCRNDGCHLLFIQCPSCAEKYEGCCSSSCTEEMKLPEQEQRARRAGRE 326

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BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Match: UPI0005787BFA (rhodanese-related sulfurtransferase n=4 Tax=Yersinia pestis TaxID=632 RepID=UPI0005787BFA)

HSP 1 Score: 126 bits (316), Expect = 3.760e-32
Identity = 61/122 (50.00%), Postives = 82/122 (67.21%), Query Frame = 0

Query:    2 GFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLSKCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGC--------DEQRSREDLRASLMRTEREAMGL 115
            GF NV  +EGGII YA+ AKE+GL  KF G N+VFD+RMG++++ D+++ CHQCGTPC  HTNC N  CH   IQCP CA+K+  CCS+ C        +EQRSR   R + ++   ++ GL
Sbjct:   43 GFKNVYHVEGGIIEYARKAKEQGLPLKFIGKNFVFDERMGERISDDVIAHCHQCGTPCDAHTNCKNDGCHLLFIQCPVCAAKFEGCCSQICQEELKLPQEEQRSRRAGRENGIKIFNKSKGL 164

The following BLAST results are available for this feature:

BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot

BLAST of mRNA_E-fasciculatus_F_contig16215.4233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LIE1_ECTSI	1.600e-153	86.17	Rhodanese Homology Domain superfamily n=1 Tax=Ecto...	[more]
A0A6H5L4H6_9PHAE	9.520e-147	84.40	Rhodanese domain-containing protein n=1 Tax=Ectoca...	[more]
A0A835YRN1_9STRA	6.440e-39	40.69	Rhodanese domain-containing protein n=1 Tax=Tribon...	[more]
A0A2W4P2V6_9BACT	5.320e-34	61.29	Rhodanese domain-containing protein (Fragment) n=1...	[more]
A0A1M3R1U5_9SPHI	1.170e-33	62.37	tRNA uridine(34) hydroxylase n=2 Tax=Bacteroidetes...	[more]
A0A379FTE6_PRORE	3.390e-33	55.45	tRNA uridine(34) hydroxylase n=13 Tax=Providencia ...	[more]
A0A1M3EBD4_9BACT	5.440e-33	58.10	tRNA uridine(34) hydroxylase n=1 Tax=Bacteroidetes...	[more]
A0A1T4L8R6_9BACT	6.500e-33	61.29	tRNA uridine(34) hydroxylase n=1 Tax=Sediminibacte...	[more]
A0A264VZJ7_PRORE	1.300e-32	54.55	tRNA uridine(34) hydroxylase n=29 Tax=Morganellace...	[more]
UPI0005787BFA	3.760e-32	50.00	rhodanese-related sulfurtransferase n=4 Tax=Yersin...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036873	Rhodanese-like domain superfamily	GENE3D	3.40.250.10		coord: 1..55 e-value: 5.1E-8 score: 34.5
IPR022111	Rhodanase, C-terminal	PFAM	PF12368	Rhodanese_C	coord: 30..92 e-value: 1.2E-15 score: 57.6
None	No IPR available	PANTHER	PTHR43846	FAMILY NOT NAMED	coord: 2..96

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-fasciculatus_F_contig16215	contig	E-fasciculatus_F_contig16215:74..2520 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-fasciculatus_F_contig16215.4233.1	mRNA_E-fasciculatus_F_contig16215.4233.1	Ectocarpus fasciculatus Ec846f_Ec191_B4_f female	mRNA	E-fasciculatus_F_contig16215 74..2547 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-fasciculatus_F_contig16215.4233.1 ID=prot_E-fasciculatus_F_contig16215.4233.1|Name=mRNA_E-fasciculatus_F_contig16215.4233.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=281bp
MGFTNVTRLEGGIISYAKFAKERGLESKFKGVNYVFDKRMGDKVTGDMLS
KCHQCGTPCADHTNCANPCCHARLIQCPSCASKYNACCSRGCDEQRSRED
LRASLMRTEREAMGLPPLPTPSLTSGSTPTEVGGAAETANDGVQGGVPEP
AGLEEAAAIRTEAEEEEELMWLVWPFQDPTLNMMFDRAFDEFQDSAPTGD
DDSVVEQDSSRMIGIVSRLGGGRRALAVGLGSGGAAGRAGLRRLAEALGE
GDGGELFVVEASSEAASAARGLSLVAQARGC

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR022111	Rhodanese_C
IPR036873	Rhodanese-like_dom_sf