prot_E-fasciculatus_F_contig16163.4205.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16163.4205.1
Unique Nameprot_E-fasciculatus_F_contig16163.4205.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length189
Homology
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Match: D8LMZ2_ECTSI (COG2350: Uncharacterized protein conserved in bacteria n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMZ2_ECTSI)

HSP 1 Score: 353 bits (905), Expect = 9.230e-118
Identity = 168/181 (92.82%), Postives = 174/181 (96.13%), Query Frame = 0
Query:    1 SRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKARALRLLEEDPYRKNGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHEEYYERTRRCIGEGPILSSDLAEDSPKNKPVGSLMFFNAINDEEARETAEGDPFNQAGVYDSVFVARCVELYL 181
            +RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTK  ALRLLEEDPYRK+GLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKG AKLREKNNDAH EYYERTRRCIGEGP+LSSDLAEDSP+NKPVGSLMFFNAINDEEARETAEGDPFNQAG+YDSVFVAR  E+ L
Sbjct:  217 ARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGSAKLREKNNDAHLEYYERTRRCIGEGPVLSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDL 397          
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Match: A0A6H5JNB6_9PHAE (YCII domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNB6_9PHAE)

HSP 1 Score: 337 bits (865), Expect = 4.420e-112
Identity = 170/208 (81.73%), Postives = 176/208 (84.62%), Query Frame = 0
Query:    1 SRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKARA--------------------------LRLLEEDPYRKNGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHEEYYERTRR-CIGEGPILSSDLAEDSPKNKPVGSLMFFNAINDEEARETAEGDPFNQAGVYDSVFVARCVELYL 181
            +RIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKA A                          LRLLEEDPYRK+GLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAH EYYE+TRR CIGEGPILSSDLAEDSP+NKPVGSLMFFNAINDEEARETAEGDPFNQAG+YDSVFVAR  E+ L
Sbjct:  101 ARIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKASAIHLGYFYVLLRKIGSDEAVAGRKEGALRLLEEDPYRKSGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHLEYYEKTRRRCIGEGPILSSDLAEDSPRNKPVGSLMFFNAINDEEARETAEGDPFNQAGLYDSVFVARFNEIDL 308          
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Match: A0A7S0EWI6_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EWI6_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 4.310e-9
Identity = 46/155 (29.68%), Postives = 72/155 (46.45%), Query Frame = 0
Query:   27 PSKCRVIGNMFCIRSYTKARALRLLEEDPYRKNGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKLREKNNDAHEEYYERTRRCIGEGPILSSDLAEDSPKNKPVGSLMFFNAINDEEARETAEGDPFNQAGVYDSVFVARCVELYL 181
            P    V+GN+  ++  + A      + DP+   G + +++ +R+  +     N       Y   C+DK   ++LRE   DAH  +     R +  G  L S L E       VG+L+F N    EE R  A  DP+NQAG+++SV VA   +  L
Sbjct:  191 PQGSFVLGNLNVVKGSSLADVAAWGQGDPHDVVGAYASLTTHRWLRSPDPELNLPAPGPCYGVYCLDKPASSELREATRDAHLAWLAEGGR-VHLGGALQSPLGEAVGN---VGTLLFVNGDELEEVRRWATEDPYNQAGLFESVLVAPVTQYAL 341          
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Match: A0A840CDM8_9RHOB (YCII domain-containing protein n=2 Tax=Actibacterium TaxID=1433986 RepID=A0A840CDM8_9RHOB)

HSP 1 Score: 52.0 bits (123), Expect = 1.090e-5
Identity = 31/87 (35.63%), Postives = 44/87 (50.57%), Query Frame = 0
Query:   87 YLALCMDKKGKAKLREKNNDAHEEYYERTRRCIGEGPILSSDLAEDSPKNKPVGSLMFFNAINDEEARETAEGDPFNQAGVYDSVFV 173
            +  +C DK G  + R+ N DAH  Y + T      GP L  D A D       GSL+        +A+  AEGDP+ QAG+++SV +
Sbjct:    4 FAVICKDKPGHLETRKANRDAHLSYLKETGVVTQAGPFL--DEAGDM-----CGSLLILEVGALSDAQAWAEGDPYAQAGLFESVAI 83          
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Match: A0A1Z9TJS9_9RICK (YCII domain-containing protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Z9TJS9_9RICK)

HSP 1 Score: 50.4 bits (119), Expect = 4.020e-5
Identity = 31/93 (33.33%), Postives = 47/93 (50.54%), Query Frame = 0
Query:   87 YLALCMDKKGKAKLREKNNDAHEEYYERTRRCIGEGPILSSDLAEDSPKNKPVGSLMFFNAINDEEARETAEGDPFNQAGVYDSVFVARCVEL 179
            +  +C+D +   + R  N +AH EY   T      GP LS    ED      +GSL+   A N EEA   ++ DP+N+AG++ SV + +   L
Sbjct:    3 FSVICLDNEKSLEKRLSNXEAHLEYVXGTGVVRYAGPFLSD---EDETM---MGSLIVIEAENKEEALNWSKNDPYNKAGLFQSVKIYKFKHL 89          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16163.4205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LMZ2_ECTSI9.230e-11892.82COG2350: Uncharacterized protein conserved in bact... [more]
A0A6H5JNB6_9PHAE4.420e-11281.73YCII domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S0EWI6_9EUKA4.310e-929.68Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
A0A840CDM8_9RHOB1.090e-535.63YCII domain-containing protein n=2 Tax=Actibacteri... [more]
A0A1Z9TJS9_9RICK4.020e-533.33YCII domain-containing protein n=2 Tax=Alphaproteo... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005545YCII-relatedPFAMPF03795YCIIcoord: 87..173
e-value: 6.7E-5
score: 23.2
NoneNo IPR availableGENE3D3.30.70.1060coord: 85..179
e-value: 3.8E-19
score: 70.5
NoneNo IPR availablePANTHERPTHR33606FAMILY NOT NAMEDcoord: 85..173
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 87..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16163contigE-fasciculatus_F_contig16163:101..2507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16163.4205.1mRNA_E-fasciculatus_F_contig16163.4205.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16163 101..2507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16163.4205.1 ID=prot_E-fasciculatus_F_contig16163.4205.1|Name=mRNA_E-fasciculatus_F_contig16163.4205.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=189bp
SRIAKRTFEDDPDREAGILWNRSVLSPSKCRVIGNMFCIRSYTKARALRL
LEEDPYRKNGLFGTVSLYRYPYNMGGGFNWHLSNFPYLALCMDKKGKAKL
REKNNDAHEEYYERTRRCIGEGPILSSDLAEDSPKNKPVGSLMFFNAIND
EEARETAEGDPFNQAGVYDSVFVARCVELYLWCCLVAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel
IPR005545YCII