prot_E-fasciculatus_F_contig1616.4202.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig1616.4202.1
Unique Nameprot_E-fasciculatus_F_contig1616.4202.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length293
Homology
BLAST of mRNA_E-fasciculatus_F_contig1616.4202.1 vs. uniprot
Match: D8LQ52_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ52_ECTSI)

HSP 1 Score: 515 bits (1327), Expect = 3.390e-180
Identity = 252/293 (86.01%), Postives = 269/293 (91.81%), Query Frame = 0
Query:    1 MSCTRQQEDGHDSTRGMRTTVPKDCCAAHPPCSSTPVPSNSNAPHRRVRSMAETLEDRNLPPNQPTLTFRVTGASSVARLEPLLLDQGGRNQRPTIWLRSLDSCDDGARIDFVWETTVTKQQQQRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESFAVNGRSAVSRWAEQRFKEKISSRDSPPXXPSARESGYQHDDQFLARQRALVQGTSAATETTEKLEAVGNGPDGEEDWWCVKAAGGNGGLDIWVLHEGNWKMVTEALSEHESYVIQRYVARPMLWRGRKFHF 293
            MSC+RQQED HDST+GM TT+PKDCCAA P C ST VPSN+NAPHRRVRSMAETLEDRN PP QPTLTFRVTGASSVARLEPLLL  GGRNQRPTIW RSLDS DDG R+DFVWETTVTKQQQ+RHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLES+AVNGR+AV+RWA+QRFKE+   RD PP  PS RE+GY HDDQFLAR+RALVQGTSAATETT++ EAVGNG  GEEDWWCVKAAGGNGGLDIWVLH+GNWKMVTEALSEHESYVIQRYVARPMLW+GRKFHF
Sbjct:    1 MSCSRQQEDAHDSTKGMPTTLPKDCCAALPSCLSTSVPSNTNAPHRRVRSMAETLEDRNFPPGQPTLTFRVTGASSVARLEPLLLGPGGRNQRPTIWSRSLDSGDDGVRVDFVWETTVTKQQQRRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESYAVNGRNAVARWAQQRFKEQNLPRDRPPPPPSTREAGYPHDDQFLARKRALVQGTSAATETTQESEAVGNGHAGEEDWWCVKAAGGNGGLDIWVLHKGNWKMVTEALSEHESYVIQRYVARPMLWQGRKFHF 293          
BLAST of mRNA_E-fasciculatus_F_contig1616.4202.1 vs. uniprot
Match: A0A835Z2B8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2B8_9STRA)

HSP 1 Score: 146 bits (369), Expect = 1.870e-36
Identity = 100/251 (39.84%), Postives = 126/251 (50.20%), Query Frame = 0
Query:   67 LTFRVTGASSVARLEPLLLDQGGRNQRPTIWLRSLDSCDDGARIDFVWETTVTKQQQQRHRDARVLNRLSGAQVLEDKANLVLLQRLMTAPTLESFAVNGRSAVSRWAEQRFKEKISSRDSPPXXPSARESGYQHDDQFLARQRA----------------LVQGTSAATETTEKLEAVGNGPDGEEDWWCVKAAGGNGGLDIWVLHEGNWKMVTEALSE-----HESYVIQRYVARPMLWR---GRKFHF 293
            L +RVTGA +V+R+ P+L       +  T+  +   S D+  R+DFV+ETTVTK  Q  HR A VLNRL G+ VLEDKA+  LL R M AP LES  V G S V  WA+ R+    +S  S     S  E          A  R                    G+ ++     +    G  P  E DWWCVKAA GNGG D+WVLH GN + +   LS        +YV+QRYVARP+L     G K HF
Sbjct:   11 LRYRVTGAGAVSRIRPVLDTDSVCREGCTVEWQEASSPDE--RLDFVYETTVTKDWQAAHRGAVVLNRLCGSVVLEDKASFALLSRRMAAPALESHLVEGSSGVEAWAKARWGPLFNSSSSGDEGGSGAEGNDSSSSGAAACHRCGSREPVGDXXXXXXXXXAAGSLSSGAAAARARCRG-APPREPDWWCVKAARGNGGGDVWVLHAGNAQRLVAQLSRCGGGGGGAYVLQRYVARPLLLPRCGGAKSHF 258          
BLAST of mRNA_E-fasciculatus_F_contig1616.4202.1 vs. uniprot
Match: W7TQE7_9STRA (Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQE7_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 2.950e-16
Identity = 73/236 (30.93%), Postives = 108/236 (45.76%), Query Frame = 0
Query:   67 LTFRVTGASSVARLEPLLLDQGGRNQRPTIWLRSLDSCDDGARIDFVWETTVTKQQQQRHRDARVLNRLSGAQVLEDKANLVLLQRLMTA-----PTLESFAVNGRSAVSRWAEQRFKEKISSRDSPPXXPSARESGYQHDDQFLARQRALVQGTSAA--TETTEKLEAVGNGPDGEEDWWCVKAAGGNGGLDIWVLHEGNWKM-VTEALSEHESYVIQRYVARPMLWRGR-KFHF 293
            L +R+TGA++ AR+ PLL ++   +        + +  D    +DFVWET V ++ +  H  ARVLNRLS   +LE+KA    +  L+++     P LE+  V    A + W + R                              RQ   VQ  +    T+ TE  E          +WW +KAAG NGG D+ VL      +    AL   +SYV+QRY+ RP+L   + KFH+
Sbjct:   22 LIYRITGAAAQARIVPLLQERAEVHWIAGRCQNACNQADPPVPLDFVWETHVARRDKPLHDCARVLNRLSNTVILENKAYFSHILALVSSQNQDIPVLETAVVRAMDAQA-WLDAR-----------------------------RRQLRTVQNANYTVFTDCTEDAE----------EWWILKAAGANGGGDVHVLPPACTHVPACIALRPLDSYVVQRYITRPLLLEKKYKFHY 217          
BLAST of mRNA_E-fasciculatus_F_contig1616.4202.1 vs. uniprot
Match: A0A7S2XVN0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVN0_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.320e-15
Identity = 50/141 (35.46%), Postives = 70/141 (49.65%), Query Frame = 0
Query:  157 PTLESFAVNGRSAVSRWAEQRFKEKISSRDSPPXXPSARESGYQHDDQFLARQRALVQGTSAATETTEKLEAVGNGPDGEE--DWWCVKAAGGNGGLDIWVLHEGNWKMVTEALS--EHESYVIQRYVARPMLWRGRKFHF 293
            PTL++F V  +  + RWA +R+ +  SS  +P                            S  T      + VG+G    E  DWW VK + GNGG DIWV+++ N++ V E +S  + E  V Q YVARP+L+ GRKFHF
Sbjct:    1 PTLKTFIVRDKDGLRRWARERWGDPESSEVAP------------------------ADNASTTTNQVSGAQPVGDGGGAGEGSDWWMVKVSKGNGGSDIWVINQQNFRAVLEDISAVKEEELVCQEYVARPLLFHGRKFHF 117          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig1616.4202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LQ52_ECTSI3.390e-18086.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z2B8_9STRA1.870e-3639.84Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TQE7_9STRA2.950e-1630.93Tubulin-tyrsoine ligase n=1 Tax=Nannochloropsis ga... [more]
A0A7S2XVN0_9STRA1.320e-1535.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004344Tubulin-tyrosine ligase/Tubulin polyglutamylasePFAMPF03133TTLcoord: 227..292
e-value: 3.1E-8
score: 33.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig1616contigE-fasciculatus_F_contig1616:2..1619 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig1616.4202.1mRNA_E-fasciculatus_F_contig1616.4202.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig1616 2..1619 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig1616.4202.1 ID=prot_E-fasciculatus_F_contig1616.4202.1|Name=mRNA_E-fasciculatus_F_contig1616.4202.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=293bp
MSCTRQQEDGHDSTRGMRTTVPKDCCAAHPPCSSTPVPSNSNAPHRRVRS
MAETLEDRNLPPNQPTLTFRVTGASSVARLEPLLLDQGGRNQRPTIWLRS
LDSCDDGARIDFVWETTVTKQQQQRHRDARVLNRLSGAQVLEDKANLVLL
QRLMTAPTLESFAVNGRSAVSRWAEQRFKEKISSRDSPPPPPSARESGYQ
HDDQFLARQRALVQGTSAATETTEKLEAVGNGPDGEEDWWCVKAAGGNGG
LDIWVLHEGNWKMVTEALSEHESYVIQRYVARPMLWRGRKFHF
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004344TTL/TTLL_fam