prot_E-fasciculatus_F_contig16112.4183.1 (polypeptide) Ectocarpus fasciculatus Ec846f_Ec191_B4_f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-fasciculatus_F_contig16112.4183.1
Unique Nameprot_E-fasciculatus_F_contig16112.4183.1
Typepolypeptide
OrganismEctocarpus fasciculatus Ec846f_Ec191_B4_f female (Ectocarpus fasciculatus Ec846f_Ec191_B4_f female)
Sequence length326
Homology
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Match: A0A6H5KKK8_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK8_9PHAE)

HSP 1 Score: 517 bits (1332), Expect = 5.740e-167
Identity = 276/333 (82.88%), Postives = 281/333 (84.38%), Query Frame = 0
Query:    1 MPTPGQNSAEFILLAAKAILQS-QQEGRAPPRRAARSPAVSYASSSIHSSGSAPPQGLIGVDPSSMLGVGDGGG------SAMGGDYLFEEAEKGLFNEPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLELLQRRPWGIGGLFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ 326
            MPTPGQNSAEFILLAAKA+LQS QQEG    RR ARSP  SYASSSIHSS S  PQGLIGVDPSS+LGVGDG        S MGGDYL+E+AEKGLFNEPPG                               TLELLQR+PWGIGG FEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ
Sbjct:  430 MPTPGQNSAEFILLAAKAVLQSSQQEGGRASRRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDGXXXXXXXXSTMGGDYLYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEEGKEEGTT----TLELLQRQPWGIGGWFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ 758          
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Match: D8LSM1_ECTSI (ABC transporter domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM1_ECTSI)

HSP 1 Score: 506 bits (1302), Expect = 2.360e-165
Identity = 274/333 (82.28%), Postives = 278/333 (83.48%), Query Frame = 0
Query:    1 MPTPGQNSAEFILLAAKAILQSQQ---EGRAPPRRAARSPAVSYASSSIHSSGSAPPQGLIGVDPSSMLGVGDGGGSAMGG----DYLFEEAEKGLFNEPPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLELLQRRPWGIGGLFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ 326
            MPTPGQNSAEFILLAAKA+LQS Q   EGRA  RR ARSP  SYASSSIHSS S  PQGLIGVDPSS+LGVGDG           DY +E+AEKGLFNEPPG                   X           TLELLQRRPWGIGG FEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ
Sbjct:   27 MPTPGQNSAEFILLAAKAVLQSSQQHQEGRAS-RRGARSPEPSYASSSIHSSASTSPQGLIGVDPSSLLGVGDGXXXXXXXXXXXDYFYEDAEKGLFNEPPGGKPAAYGGKGGYAEEEGAEXGKEEGTT----TLELLQRRPWGIGGWFEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAMSTPQ 354          
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Match: A0A166ABW5_DAUCS (ABC transporter domain-containing protein n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166ABW5_DAUCS)

HSP 1 Score: 58.5 bits (140), Expect = 7.700e-6
Identity = 43/153 (28.10%), Postives = 66/153 (43.14%), Query Frame = 0
Query:  168 RRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSA 320
            R K    A L ++  +G+L  T+F       KD   V              LG   F   + L+  ++A+P   + +R   RE + G Y    Y   S+ + LP +LVG  +Y    YW +GL  +  +FF FS +  + +LM  S     SA
Sbjct:  352 RTKQLFSAKLTQSIVVGLLLGTIFMN---ANKDHDTVK---------LHTRLGFFAFNLSFLLSSSIEALPIFVQERRILMRETSSGAYRIASYVTASTVIFLPFLLVGASLYSITVYWLVGLRRDIDRFFYFSLVVWLVSLMSNSFVAFCSA 492          
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Match: A0A7S2B2D3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B2D3_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.900e-5
Identity = 42/151 (27.81%), Postives = 67/151 (44.37%), Query Frame = 0
Query:  170 KDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSA 320
            K +L A   +N F+GV    V++Q+               D    AS    + YF   +    +LQAIP++FE +  F RER  G YS   Y +    V+  + L     Y  +CY+ +GL   +  F  F  I    ++ GY+ +  ++A
Sbjct:    3 KKSLYAGFMRNLFVGVWYGCVYYQQ--------------TDYHTLAS----VCYFSQQFICMSNLQAIPQMFEERTLFYRERGAGFYSEASYLMARVLVNATVQLWFVFAYSALCYFLVGLRGTWKDFLYFYAIMFGLSIAGYAFSNMIAA 135          
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Match: UPI0006D4EBCB (ATP-binding cassette sub-family G member 4 n=1 Tax=Halyomorpha halys TaxID=286706 RepID=UPI0006D4EBCB)

HSP 1 Score: 56.2 bits (134), Expect = 4.300e-5
Identity = 48/182 (26.37%), Postives = 84/182 (46.15%), Query Frame = 0
Query:  142 FEESSHAVGFWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKDAPLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFER-ERAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIFSGIGLMSTLMGYSLAQTLSAAM 322
            F + ++   F  QV+ +  R      R    + + L  +A IG+L    FF  G    DA +V           SN   +L+F  L+     LQ++   F  +    R E     YS   Y+L ++   LPI +   ++Y  + YW  G P E+ +FF+F+ +G++++L+  S+   + A+M
Sbjct:  331 FHKQTYPASFVKQVAVLVQRIGIQLIRDHFLMHSRLMIHAVIGLLIGVFFFDIGC---DAGMV----------FSNY-NVLFFSVLFLAFSALQSMAIAFPLELPIIRKEHFNCWYSIKAYYLANTIADLPIQVSCAIIYCTIVYWMSGQPPEWTRFFMFTFMGIITSLLAQSIGYLVGASM 498          
The following BLAST results are available for this feature:
BLAST of mRNA_E-fasciculatus_F_contig16112.4183.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KKK8_9PHAE5.740e-16782.88ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D8LSM1_ECTSI2.360e-16582.28ABC transporter domain-containing protein n=1 Tax=... [more]
A0A166ABW5_DAUCS7.700e-628.10ABC transporter domain-containing protein n=1 Tax=... [more]
A0A7S2B2D3_9STRA1.900e-527.81Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
UPI0006D4EBCB4.300e-526.37ATP-binding cassette sub-family G member 4 n=1 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 154..324
e-value: 1.6E-17
score: 63.6
NoneNo IPR availablePANTHERPTHR19241ATP-BINDING CASSETTE TRANSPORTERcoord: 153..324
NoneNo IPR availablePANTHERPTHR19241:SF607coord: 153..324
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 316..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 239..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..238
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 195..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 176..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..293
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 259..288
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 294..315
NoneNo IPR availableTMHMMTMhelixcoord: 175..197
NoneNo IPR availableTMHMMTMhelixcoord: 297..319
NoneNo IPR availableTMHMMTMhelixcoord: 268..290

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-fasciculatus_F_contig16112contigE-fasciculatus_F_contig16112:219..2401 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus Ec846f_Ec191_B4_f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-fasciculatus_F_contig16112.4183.1mRNA_E-fasciculatus_F_contig16112.4183.1Ectocarpus fasciculatus Ec846f_Ec191_B4_f femalemRNAE-fasciculatus_F_contig16112 219..2422 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-fasciculatus_F_contig16112.4183.1 ID=prot_E-fasciculatus_F_contig16112.4183.1|Name=mRNA_E-fasciculatus_F_contig16112.4183.1|organism=Ectocarpus fasciculatus Ec846f_Ec191_B4_f female|type=polypeptide|length=326bp
MPTPGQNSAEFILLAAKAILQSQQEGRAPPRRAARSPAVSYASSSIHSSG
SAPPQGLIGVDPSSMLGVGDGGGSAMGGDYLFEEAEKGLFNEPPGGGKPA
TAAYGGKGGGYAEEEGAEEGKEERTTTLELLQRRPWGIGGLFEESSHAVG
FWAQVSAVWGRGWTVQARRKDTLKALLFKNAFIGVLAATVFFQKGAVEKD
APLVDPLIQDVTPAASNVLGILYFGCLYGLTGHLQAIPEIFEWKRHFERE
RAGGMYSTTVYWLVSSTVHLPIILVGFLVYLNVCYWALGLPHEYAKFFIF
SGIGLMSTLMGYSLAQTLSAAMSTPQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans